Cucsa.084430 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.084430
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	WD repeat-containing protein 5
Location	scaffold00862 : 155698 .. 158874 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTTAGAAGGCAAGTCGGGACGAGTAAGTTCCATGGCAAGCGGCGGCACGCAACCGTACAAACCCTACCGGCACCTGAAAACCTTGACGGCACACACTCGCGCCGTCTCCTGTGTCAAATTCTCCAACGATGGAACTCTCTTAGCTTCTGCCTCTCTCGACAAAACCCTTATCATCTGGTCTTCCTCTTCCCTCACTCTCCGCCACCGCCTCGTCGGCCATTCTGAAGGCATCTCCGATCTCGCCTGGTCTTCCGATTCTCATTACATTTGCTCCGCCTCCGACGATCGCACTCTCCGTATCTGGGACGCCCGTTCTCCCACCGGCGAGTGCGTCAAAACCCTACGAGGCCATTCCGATTTTGTATTCTGCGTCAATTTCAATCCTCAATCCAATCTTATTGTCTCGGGCTCCTTCGATGAGACTATTCGCATTTGGGAGGTGAAGACTGGGAAGTGTCTTCATGTTATAAGGGCTCATTCTATGCCTGTTACTTCTGTTCATTTTAATCGTGATGGTTCGCTTATTGTTTCTGGGAGTCATGATGGTTCTTGTAAGATTTGGGATGCTTCTAGTGGGACTTGCCTGAAGACTCTTATTGATGATAAAGTCCCAGCTGTTTCTTTTGCTAAGTTCTCTCCTAATGGCAAGTTCATACTTGTTGCTACACTCAATGATACCCTTGTAAGTTCTCAAACTCAGGTCTTGTGCTTGTTGTGGTTTTAGTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTGTGTGTGTGTGTGTGTGTGTTTTAAATTGTTTTCTTGATGATACGATTCTGTCGGCTGATTGATTTTTGAACCCAACTCAGTGAGATTGCTGGTAATGCTCAAATGGTATCTTATAGGATGAAATTTGATAAACCTTCCTTCTGTTTTAACCCCATTGTATCCTGAAATTCCAGTTAACCCCAAACCGTGCAGACTCTACCTATGAGATATCGGGATAGTTTATTTCCTAACGCATTTGCTTCTTTATGCCATGATCTGATGATCTACAGTTGGGAAAGAAAACAAAAGGTTATTGAATGAGTTCTTATTTGAATGTCGAAGGGGGAACCATCTTTGGGTTGGTTAAGTCTCTAGCAACCGTGCACATTGTCAACTTCTTAGGAAATTAGATGAGGATTGATTTCTTAAAGATTTTACCTTCCCTAGCGAAATTAGGTTGGGCTTGATTAAAAAATTATGTAGTGGTGTGGTTGATCAAACCAGTTACTGTGGCATTTTAAGATCAGAGGTTTTGATGTAGTACAGATAAATTTGGGGTTTTGGGAAGAGTAGTAATCCCTTTGTATTCTTGATGATAAGCCAAATTAGAAGCCTAGGAATTAGGATAGTAAGGTTTTATAGGAGTAGGATGTTCGAAAATCCTGGATTAATTAGATTCTGAAATCATTGTAAACTTATTATATCTGCAAGATATGAGATTATGACCACTTACTGGCGTTTTCATACTCTATAGTATTTGATAGACAATTTTTGGAATATCAAATCTATCAACACTATAACATCTAGCTAAAGTTTATCCTGTCTTTAGTCAATTTGAAGATTTGCAGTTATGTTAGTTCTAGTCGTCTTCTTAATTTGTTCTACAAGAGCCCATGAACTATATGCAGTACATAGTTAAGACTATATGGTTTTTTTATGTGAAAACCAGCTTCCGTGGAGATAAATGGAAGAATATACAAAATTCAACCAAAGAAGCCACCCAGAAACTAAACCAATTTTACAAAAAATGGGCTCCAATCCAGAATGCCAAGGCCTAAAGGATAGGCTTTTTCCGAAGTATAAGATGGGAAAACTCAGACTATTTGGTTATGATGGCTAATTTCTATTTTATTTTATATTTTTTTAGAAAAATTTTAGGGGCTTGCGACCTTCATGGAAGTAAATATTAATTCAGAGTTGTGAATGTGTTCTGTTGCCTAGATCAGTTTAGCCCTTCTTTGCAACTTAGTAGGAGCGGAAAAACTATTAAATTTTGTTGGGTGAGGATGTCATCACATACTTTTGTTTGTATTCTTAGACTTATTAAATGCAACTTCATGTTCGTATTTTGAATACAATTGTCTATGCCTTTTCTTATTAGAAATTCACATTTTCTGTTATTTCATATTTTTGTTTTTGTGGGTGCAGAAGCTATGGAACTACTCAGCTGGAAAGTTTTTGAAGATATATACAGGACATGTAAATCGAGTCCATTGTGTTGTGTCCACATTTTCTGTCACCAATGGAAAATACATTGTTAGCGGATCGGAGGACAAATGTGTGTATATATGGGATCTACAGCAGAAAACTATGATTCAGAAACTCGAAGGTCACACGGATGTTGTCATTTCTGTGTCTTGCCATCCAACGGAGAACAAAATTGCATCTGCAGGACTTGATGGGGATAGATCAGTTAGAGTTTGGGTTCAAGATCCATGACATCCATATTTTTCATCATCTTTGCATATCTAACTTCCGAGGCAAGTTAAAGAAACAAAACTAAAACCAATAGAGAAGGTTCGTTTTCATGTGAATTTGATGCTGAATAATGTTTTCGTCGTGTACTGGACAACAACTGGGCATTGCTGATCAATTTCACTGGCAGTTGTATATACGAAGACTAAGACACACAGG

mRNA sequence

TGTTTTAGAAGGCAAGTCGGGACGAGTAAGTTCCATGGCAAGCGGCGGCACGCAACCGTACAAACCCTACCGGCACCTGAAAACCTTGACGGCACACACTCGCGCCGTCTCCTGTGTCAAATTCTCCAACGATGGAACTCTCTTAGCTTCTGCCTCTCTCGACAAAACCCTTATCATCTGGTCTTCCTCTTCCCTCACTCTCCGCCACCGCCTCGTCGGCCATTCTGAAGGCATCTCCGATCTCGCCTGGTCTTCCGATTCTCATTACATTTGCTCCGCCTCCGACGATCGCACTCTCCGTATCTGGGACGCCCGTTCTCCCACCGGCGAGTGCGTCAAAACCCTACGAGGCCATTCCGATTTTGTATTCTGCGTCAATTTCAATCCTCAATCCAATCTTATTGTCTCGGGCTCCTTCGATGAGACTATTCGCATTTGGGAGGTGAAGACTGGGAAGTGTCTTCATGTTATAAGGGCTCATTCTATGCCTGTTACTTCTGTTCATTTTAATCGTGATGGTTCGCTTATTGTTTCTGGGAGTCATGATGGTTCTTGTAAGATTTGGGATGCTTCTAGTGGGACTTGCCTGAAGACTCTTATTGATGATAAAGTCCCAGCTGTTTCTTTTGCTAAGTTCTCTCCTAATGGCAAGTTCATACTTGTTGCTACACTCAATGATACCCTTAAGCTATGGAACTACTCAGCTGGAAAGTTTTTGAAGATATATACAGGACATGTAAATCGAGTCCATTGTGTTGTGTCCACATTTTCTGTCACCAATGGAAAATACATTGTTAGCGGATCGGAGGACAAATGTGTGTATATATGGGATCTACAGCAGAAAACTATGATTCAGAAACTCGAAGGTCACACGGATGTTGTCATTTCTGTGTCTTGCCATCCAACGGAGAACAAAATTGCATCTGCAGGACTTGATGGGGATAGATCAGTTAGAGTTTGGGTTCAAGATCCATGACATCCATATTTTTCATCATCTTTGCATATCTAACTTCCGAGGCAAGTTAAAGAAACAAAACTAAAACCAATAGAGAAGGTTCGTTTTCATGTGAATTTGATGCTGAATAATGTTTTCGTCGTGTACTGGACAACAACTGGGCATTGCTGATCAATTTCACTGGCAGTTGTATATACGAAGACTAAGACACACAGG

Coding sequence (CDS)

ATGGCAAGCGGCGGCACGCAACCGTACAAACCCTACCGGCACCTGAAAACCTTGACGGCACACACTCGCGCCGTCTCCTGTGTCAAATTCTCCAACGATGGAACTCTCTTAGCTTCTGCCTCTCTCGACAAAACCCTTATCATCTGGTCTTCCTCTTCCCTCACTCTCCGCCACCGCCTCGTCGGCCATTCTGAAGGCATCTCCGATCTCGCCTGGTCTTCCGATTCTCATTACATTTGCTCCGCCTCCGACGATCGCACTCTCCGTATCTGGGACGCCCGTTCTCCCACCGGCGAGTGCGTCAAAACCCTACGAGGCCATTCCGATTTTGTATTCTGCGTCAATTTCAATCCTCAATCCAATCTTATTGTCTCGGGCTCCTTCGATGAGACTATTCGCATTTGGGAGGTGAAGACTGGGAAGTGTCTTCATGTTATAAGGGCTCATTCTATGCCTGTTACTTCTGTTCATTTTAATCGTGATGGTTCGCTTATTGTTTCTGGGAGTCATGATGGTTCTTGTAAGATTTGGGATGCTTCTAGTGGGACTTGCCTGAAGACTCTTATTGATGATAAAGTCCCAGCTGTTTCTTTTGCTAAGTTCTCTCCTAATGGCAAGTTCATACTTGTTGCTACACTCAATGATACCCTTAAGCTATGGAACTACTCAGCTGGAAAGTTTTTGAAGATATATACAGGACATGTAAATCGAGTCCATTGTGTTGTGTCCACATTTTCTGTCACCAATGGAAAATACATTGTTAGCGGATCGGAGGACAAATGTGTGTATATATGGGATCTACAGCAGAAAACTATGATTCAGAAACTCGAAGGTCACACGGATGTTGTCATTTCTGTGTCTTGCCATCCAACGGAGAACAAAATTGCATCTGCAGGACTTGATGGGGATAGATCAGTTAGAGTTTGGGTTCAAGATCCATGA

Protein sequence

MASGGTQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRLVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQSNLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDASSGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHCVVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDGDRSVRVWVQDP*

Homology

[Close]

BLAST of Cucsa.084430 vs. Swiss-Prot
Match: WDR5B_ARATH (COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana GN=WDR5B PE=1 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 7.8e-142
Identity = 236/310 (76.13%), Postives = 270/310 (87.10%), Query Frame = 1


Query: 3   SGGTQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRLVG 62
           SG    YKPYRHLKTL  HT A+SCVKFSNDG LLASAS+DKT+I+WS+++ +L HR  G
Sbjct: 24  SGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEG 83

Query: 63  HSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQSNL 122
           HS GISDLAWSSDSHY CSASDD TLRIWDARSP  EC+K LRGH++FVFCVNFNP SNL
Sbjct: 84  HSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPY-ECLKVLRGHTNFVFCVNFNPPSNL 143

Query: 123 IVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDASSG 182
           IVSGSFDETIRIWEVKTGKC+ +I+AHSMP++SVHFNRDGSLIVS SHDGSCKIWDA  G
Sbjct: 144 IVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEG 203

Query: 183 TCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHCVV 242
           TCLKTLIDDK PAVSFAKFSPNGKFILVATL+ TLKL NY+ GKFLK+YTGH N+V C+ 
Sbjct: 204 TCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCIT 263

Query: 243 STFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDG 302
           S FSVTNGKYIVSGSED CVY+WDLQ + ++Q+LEGHTD VISVSCHP +N+I+S+G   
Sbjct: 264 SAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHL 323

Query: 303 DRSVRVWVQD 313
           D+++R+W QD
Sbjct: 324 DKTIRIWKQD 332

[Close]

BLAST of Cucsa.084430 vs. Swiss-Prot
Match: WDR5_MOUSE (WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=1 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.6e-113
Identity = 197/306 (64.38%), Postives = 241/306 (78.76%), Query Frame = 1


Query: 8   PYKPYRHLK-TLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRLVGHSEG 67
           P KP   LK TL  HT+AVS VKFS +G  LAS+S DK + IW +        + GH  G
Sbjct: 30  PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89

Query: 68  ISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQSNLIVSG 127
           ISD+AWSSDS+ + SASDD+TL+IWD  S  G+C+KTL+GHS++VFC NFNPQSNLIVSG
Sbjct: 90  ISDVAWSSDSNLLVSASDDKTLKIWDVSS--GKCLKTLKGHSNYVFCCNFNPQSNLIVSG 149

Query: 128 SFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDASSGTCLK 187
           SFDE++RIW+VKTGKCL  + AHS PV++VHFNRDGSLIVS S+DG C+IWD +SG CLK
Sbjct: 150 SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 209

Query: 188 TLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHCVVSTFS 247
           TLIDD  P VSF KFSPNGK+IL ATL++TLKLW+YS GK LK YTGH N  +C+ + FS
Sbjct: 210 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 269

Query: 248 VTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDGDRSV 307
           VT GK+IVSGSED  VYIW+LQ K ++QKL+GHTDVVIS +CHPTEN IASA L+ D+++
Sbjct: 270 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTI 329

Query: 308 RVWVQD 313
           ++W  D
Sbjct: 330 KLWKSD 333

[Close]

BLAST of Cucsa.084430 vs. Swiss-Prot
Match: WDR5_HUMAN (WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.6e-113
Identity = 197/306 (64.38%), Postives = 241/306 (78.76%), Query Frame = 1


Query: 8   PYKPYRHLK-TLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRLVGHSEG 67
           P KP   LK TL  HT+AVS VKFS +G  LAS+S DK + IW +        + GH  G
Sbjct: 30  PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89

Query: 68  ISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQSNLIVSG 127
           ISD+AWSSDS+ + SASDD+TL+IWD  S  G+C+KTL+GHS++VFC NFNPQSNLIVSG
Sbjct: 90  ISDVAWSSDSNLLVSASDDKTLKIWDVSS--GKCLKTLKGHSNYVFCCNFNPQSNLIVSG 149

Query: 128 SFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDASSGTCLK 187
           SFDE++RIW+VKTGKCL  + AHS PV++VHFNRDGSLIVS S+DG C+IWD +SG CLK
Sbjct: 150 SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 209

Query: 188 TLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHCVVSTFS 247
           TLIDD  P VSF KFSPNGK+IL ATL++TLKLW+YS GK LK YTGH N  +C+ + FS
Sbjct: 210 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 269

Query: 248 VTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDGDRSV 307
           VT GK+IVSGSED  VYIW+LQ K ++QKL+GHTDVVIS +CHPTEN IASA L+ D+++
Sbjct: 270 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTI 329

Query: 308 RVWVQD 313
           ++W  D
Sbjct: 330 KLWKSD 333

[Close]

BLAST of Cucsa.084430 vs. Swiss-Prot
Match: WDR5_BOVIN (WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.6e-113
Identity = 197/306 (64.38%), Postives = 241/306 (78.76%), Query Frame = 1


Query: 8   PYKPYRHLK-TLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRLVGHSEG 67
           P KP   LK TL  HT+AVS VKFS +G  LAS+S DK + IW +        + GH  G
Sbjct: 30  PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89

Query: 68  ISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQSNLIVSG 127
           ISD+AWSSDS+ + SASDD+TL+IWD  S  G+C+KTL+GHS++VFC NFNPQSNLIVSG
Sbjct: 90  ISDVAWSSDSNLLVSASDDKTLKIWDVSS--GKCLKTLKGHSNYVFCCNFNPQSNLIVSG 149

Query: 128 SFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDASSGTCLK 187
           SFDE++RIW+VKTGKCL  + AHS PV++VHFNRDGSLIVS S+DG C+IWD +SG CLK
Sbjct: 150 SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 209

Query: 188 TLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHCVVSTFS 247
           TLIDD  P VSF KFSPNGK+IL ATL++TLKLW+YS GK LK YTGH N  +C+ + FS
Sbjct: 210 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 269

Query: 248 VTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDGDRSV 307
           VT GK+IVSGSED  VYIW+LQ K ++QKL+GHTDVVIS +CHPTEN IASA L+ D+++
Sbjct: 270 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTI 329

Query: 308 RVWVQD 313
           ++W  D
Sbjct: 330 KLWKSD 333

[Close]

BLAST of Cucsa.084430 vs. Swiss-Prot
Match: WDR5_RAT (WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=1 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.6e-113
Identity = 197/306 (64.38%), Postives = 241/306 (78.76%), Query Frame = 1


Query: 8   PYKPYRHLK-TLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRLVGHSEG 67
           P KP   LK TL  HT+AVS VKFS +G  LAS+S DK + IW +        + GH  G
Sbjct: 30  PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89

Query: 68  ISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQSNLIVSG 127
           ISD+AWSSDS+ + SASDD+TL+IWD  S  G+C+KTL+GHS++VFC NFNPQSNLIVSG
Sbjct: 90  ISDVAWSSDSNLLVSASDDKTLKIWDVSS--GKCLKTLKGHSNYVFCCNFNPQSNLIVSG 149

Query: 128 SFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDASSGTCLK 187
           SFDE++RIW+VKTGKCL  + AHS PV++VHFNRDGSLIVS S+DG C+IWD +SG CLK
Sbjct: 150 SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 209

Query: 188 TLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHCVVSTFS 247
           TLIDD  P VSF KFSPNGK+IL ATL++TLKLW+YS GK LK YTGH N  +C+ + FS
Sbjct: 210 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 269

Query: 248 VTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDGDRSV 307
           VT GK+IVSGSED  VYIW+LQ K ++QKL+GHTDVVIS +CHPTEN IASA L+ D+++
Sbjct: 270 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTI 329

Query: 308 RVWVQD 313
           ++W  D
Sbjct: 330 KLWKSD 333

[Close]

BLAST of Cucsa.084430 vs. TrEMBL
Match: A0A0A0K8V6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G388400 PE=4 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 4.1e-182
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 1


Query: 1   MASGGTQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRL 60
           MASGGTQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRL
Sbjct: 1   MASGGTQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRL 60

Query: 61  VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQS 120
           VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQS
Sbjct: 61  VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQS 120

Query: 121 NLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDAS 180
           NLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDAS
Sbjct: 121 NLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDAS 180

Query: 181 SGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHC 240
           SGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHC
Sbjct: 181 SGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHC 240

Query: 241 VVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGL 300
           VVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGL
Sbjct: 241 VVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGL 300

Query: 301 DGDRSVRVWVQDP 314
           DGDRSVRVWVQDP
Sbjct: 301 DGDRSVRVWVQDP 313

[Close]

BLAST of Cucsa.084430 vs. TrEMBL
Match: V4TZU9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021263mg PE=4 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 1.7e-159
Identity = 273/312 (87.50%), Postives = 290/312 (92.95%), Query Frame = 1


Query: 1   MASGGTQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRL 60
           MA+  T PYKPYRH KTLTAH+RAVSCVKFSNDGTLLASASLDKT+IIWS+SSL L HR 
Sbjct: 1   MAAAQTPPYKPYRHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRF 60

Query: 61  VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQS 120
           VGHSEGISDLAWSSDSHYICSASDDRTLRIWDAR+P  +C+KTLRGHSDFVFCVNFNPQS
Sbjct: 61  VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPF-DCLKTLRGHSDFVFCVNFNPQS 120

Query: 121 NLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDAS 180
           NLIVSGSFDE+IRIWEVKTGKC  VIRAHSMPVTSVHFNRDGSLIVSGSHDG+CKIWDA 
Sbjct: 121 NLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAG 180

Query: 181 SGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHC 240
            G CLKTLIDDK PAVSFAKFSPNGKFILV TL+ TLKLWNYSAGKFLKIYTGH N+ +C
Sbjct: 181 EGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYC 240

Query: 241 VVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGL 300
           + STFSVTNGKYIVSGSED CVY+WDLQQKTMIQKL+GHTD VISV+CHPTENKIASAGL
Sbjct: 241 ITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGL 300

Query: 301 DGDRSVRVWVQD 313
           DGDR+VRVWVQD
Sbjct: 301 DGDRTVRVWVQD 311

[Close]

BLAST of Cucsa.084430 vs. TrEMBL
Match: A0A067FRE9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021459mg PE=4 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 1.7e-159
Identity = 273/312 (87.50%), Postives = 290/312 (92.95%), Query Frame = 1


Query: 1   MASGGTQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRL 60
           MA+  T PYKPYRH KTLTAH+RAVSCVKFSNDGTLLASASLDKT+IIWS+SSL L HR 
Sbjct: 1   MAAAQTPPYKPYRHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRF 60

Query: 61  VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQS 120
           VGHSEGISDLAWSSDSHYICSASDDRTLRIWDAR+P  +C+KTLRGHSDFVFCVNFNPQS
Sbjct: 61  VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPF-DCLKTLRGHSDFVFCVNFNPQS 120

Query: 121 NLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDAS 180
           NLIVSGSFDE+IRIWEVKTGKC  VIRAHSMPVTSVHFNRDGSLIVSGSHDG+CKIWDA 
Sbjct: 121 NLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAG 180

Query: 181 SGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHC 240
            G CLKTLIDDK PAVSFAKFSPNGKFILV TL+ TLKLWNYSAGKFLKIYTGH N+ +C
Sbjct: 181 EGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYC 240

Query: 241 VVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGL 300
           + STFSVTNGKYIVSGSED CVY+WDLQQKTMIQKL+GHTD VISV+CHPTENKIASAGL
Sbjct: 241 ITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGL 300

Query: 301 DGDRSVRVWVQD 313
           DGDR+VRVWVQD
Sbjct: 301 DGDRTVRVWVQD 311

[Close]

BLAST of Cucsa.084430 vs. TrEMBL
Match: W9QVN4_9ROSA (WD repeat-containing protein 5 OS=Morus notabilis GN=L484_025079 PE=4 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 1.4e-158
Identity = 268/314 (85.35%), Postives = 290/314 (92.36%), Query Frame = 1


Query: 1   MASGGTQ--PYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRH 60
           MAS G +  PYKPYR LK L  H RAVSCVKFSNDGTLLASASLDKT++IWSS++L+L H
Sbjct: 1   MASSGQEAPPYKPYRQLKILRGHERAVSCVKFSNDGTLLASASLDKTVVIWSSATLSLLH 60

Query: 61  RLVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNP 120
           RLVGHSEG+SD+AWSSDSHYIC+ASDDRTLRIWDARSP GECVKTLRGHS+FVFCVNFN 
Sbjct: 61  RLVGHSEGVSDVAWSSDSHYICTASDDRTLRIWDARSPGGECVKTLRGHSNFVFCVNFNS 120

Query: 121 QSNLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWD 180
           QSNLIVSGSFD+TIR+WEVKTGKCLH IRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWD
Sbjct: 121 QSNLIVSGSFDDTIRVWEVKTGKCLHTIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWD 180

Query: 181 ASSGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRV 240
            +SGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYS G+FLK+Y GHVN+ 
Sbjct: 181 TASGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSTGRFLKVYAGHVNKE 240

Query: 241 HCVVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASA 300
           +C+ STFSVTNGKYIVSGSED+CVY+WDLQ K M+QKLEGHT  VISVSCHPTENKIASA
Sbjct: 241 YCITSTFSVTNGKYIVSGSEDRCVYLWDLQHKNMVQKLEGHTGTVISVSCHPTENKIASA 300

Query: 301 GLDGDRSVRVWVQD 313
           GLD D SVR+WVQD
Sbjct: 301 GLDNDISVRIWVQD 314

[Close]

BLAST of Cucsa.084430 vs. TrEMBL
Match: M5VQ04_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008858mg PE=4 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 9.2e-158
Identity = 269/316 (85.13%), Postives = 289/316 (91.46%), Query Frame = 1


Query: 1   MASGGT----QPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTL 60
           MAS G+     PY+PYRHLKTL  H  AVSCVKFSNDG LLASASLDKT+I+WSSS+LTL
Sbjct: 1   MASSGSGQASPPYRPYRHLKTLRGHENAVSCVKFSNDGDLLASASLDKTVILWSSSALTL 60

Query: 61  RHRLVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNF 120
             RLVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARS  GECVKTL+GHS+FVFCVNF
Sbjct: 61  LRRLVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSSAGECVKTLKGHSNFVFCVNF 120

Query: 121 NPQSNLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKI 180
           NPQSNLIVSGSFDETIRIWEVKTGKCLH+IRAHS+PVTSVHFNRDGSLIVSGSHDGSCKI
Sbjct: 121 NPQSNLIVSGSFDETIRIWEVKTGKCLHIIRAHSLPVTSVHFNRDGSLIVSGSHDGSCKI 180

Query: 181 WDASSGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVN 240
           WD +SGTCLKTL++DK  AVSFAKFSPNGKFILVATLNDTLKLWNYS GKFLKIYTGHVN
Sbjct: 181 WDTASGTCLKTLLEDKTAAVSFAKFSPNGKFILVATLNDTLKLWNYSTGKFLKIYTGHVN 240

Query: 241 RVHCVVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIA 300
            V+CV STFSVTNGKYIVSGSED CVY+WDLQQKTM+QKLEGH+D  ISVSCHP+ENKIA
Sbjct: 241 NVYCVTSTFSVTNGKYIVSGSEDHCVYLWDLQQKTMVQKLEGHSDTAISVSCHPSENKIA 300

Query: 301 SAGLDGDRSVRVWVQD 313
           SA L+ DR+VR+W QD
Sbjct: 301 SAALENDRTVRIWFQD 316

[Close]

BLAST of Cucsa.084430 vs. TAIR10
Match: AT4G02730.1 (AT4G02730.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 504.6 bits (1298), Expect = 4.4e-143
Identity = 236/310 (76.13%), Postives = 270/310 (87.10%), Query Frame = 1


Query: 3   SGGTQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRLVG 62
           SG    YKPYRHLKTL  HT A+SCVKFSNDG LLASAS+DKT+I+WS+++ +L HR  G
Sbjct: 24  SGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEG 83

Query: 63  HSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQSNL 122
           HS GISDLAWSSDSHY CSASDD TLRIWDARSP  EC+K LRGH++FVFCVNFNP SNL
Sbjct: 84  HSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPY-ECLKVLRGHTNFVFCVNFNPPSNL 143

Query: 123 IVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDASSG 182
           IVSGSFDETIRIWEVKTGKC+ +I+AHSMP++SVHFNRDGSLIVS SHDGSCKIWDA  G
Sbjct: 144 IVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEG 203

Query: 183 TCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHCVV 242
           TCLKTLIDDK PAVSFAKFSPNGKFILVATL+ TLKL NY+ GKFLK+YTGH N+V C+ 
Sbjct: 204 TCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCIT 263

Query: 243 STFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDG 302
           S FSVTNGKYIVSGSED CVY+WDLQ + ++Q+LEGHTD VISVSCHP +N+I+S+G   
Sbjct: 264 SAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHL 323

Query: 303 DRSVRVWVQD 313
           D+++R+W QD
Sbjct: 324 DKTIRIWKQD 332

[Close]

BLAST of Cucsa.084430 vs. TAIR10
Match: AT3G49660.1 (AT3G49660.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 399.4 bits (1025), Expect = 2.0e-111
Identity = 192/311 (61.74%), Postives = 243/311 (78.14%), Query Frame = 1


Query: 6   TQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLR-----HRL 65
           T  + PY H +TLT+H RAVS VKFS+DG LLASAS DKT+  ++ +++           
Sbjct: 8   TASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEF 67

Query: 66  VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQS 125
            GH  GISD+A+SSD+ +I SASDD+TL++WD    TG  +KTL GH+++ FCVNFNPQS
Sbjct: 68  TGHENGISDVAFSSDARFIVSASDDKTLKLWDVE--TGSLIKTLIGHTNYAFCVNFNPQS 127

Query: 126 NLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDAS 185
           N+IVSGSFDET+RIW+V TGKCL V+ AHS PVT+V FNRDGSLIVS S+DG C+IWD+ 
Sbjct: 128 NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSG 187

Query: 186 SGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHC 245
           +G C+KTLIDD+ P VSF +FSPNGKFILV TL++TL+LWN S+ KFLK YTGHVN  +C
Sbjct: 188 TGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYC 247

Query: 246 VVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGL 305
           + S FSVTNGK IVSGSED CV++W+L  K ++QKLEGHT+ V++V+CHPTEN IAS  L
Sbjct: 248 ISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSL 307

Query: 306 DGDRSVRVWVQ 312
             D++VR+W Q
Sbjct: 308 --DKTVRIWTQ 314

[Close]

BLAST of Cucsa.084430 vs. TAIR10
Match: AT5G64730.1 (AT5G64730.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 145.2 bits (365), Expect = 6.8e-35
Identity = 87/304 (28.62%), Postives = 151/304 (49.67%), Query Frame = 1


Query: 11  PYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRLVGHSEGISDL 70
           P +    L  H  AV   +F+ DG    +   D+T+ +W+     L      H   + D+
Sbjct: 7   PTKEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDV 66

Query: 71  AWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQSNLIVSGSFDE 130
             +SD+   CS   DR +  WD    TG  ++  RGH   V  V FN  S+++VS  FD 
Sbjct: 67  HVTSDNAKFCSCGGDRQVYYWDVS--TGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDR 126

Query: 131 TIRIWEVKTGKC--LHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDASSGTCLKTL 190
           ++R+W+ ++     + +I      V SV   +  + I+ GS DG+ + +D   G   + +
Sbjct: 127 SLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTK--TEIIGGSVDGTVRTFDMRIG---REM 186

Query: 191 IDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVN---RVHCVVSTF 250
            D+    V+    S +G  +L   L+ TL+L + + G+ L++Y GH++   +  C ++  
Sbjct: 187 SDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLT-- 246

Query: 251 SVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDGDRS 310
              +  +++ GSED  V+ WDL    ++ K   H  VV SVS HP E+ + ++ +DG  +
Sbjct: 247 --NSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDG--T 297

[Close]

BLAST of Cucsa.084430 vs. TAIR10
Match: AT5G08560.1 (AT5G08560.1 transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 136.7 bits (343), Expect = 2.4e-32
Identity = 96/309 (31.07%), Postives = 153/309 (49.51%), Query Frame = 1


Query: 11  PYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSS---LTLRHRLVGHSEGI 70
           P +  + L +HT  V  ++FS++G  LAS+S D+T IIW  S+   ++L+H LVGH + +
Sbjct: 263 PSQTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPV 322

Query: 71  SDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQSNLIVSGS 130
             + WS D   + +   +  +R WD  S  G+CV              + P    I++G 
Sbjct: 323 IAILWSPDDRQVLTCGAEEVIRRWDVDS--GDCVHMYEKGGISPISCGWYPDGQGIIAGM 382

Query: 131 FDETIRIWEV--KTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDASSGTCL 190
            D +I +W++  +  +C    R  +  V+ +    DG  +VS   D    ++D  +   +
Sbjct: 383 TDRSICMWDLDGREKECWKGQR--TQKVSDIAMTDDGKWLVSVCKDSVISLFDREA--TV 442

Query: 191 KTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAG-KFLKIYTGHVNRVHCVVST 250
           + LI+++    SF+  S + K+ILV  LN  ++LWN     K +  Y GH      + S 
Sbjct: 443 ERLIEEEDMITSFS-LSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSC 502

Query: 251 FSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTE-NKIASAGLDGD 310
           F      +I SGSED  VYIW      +I +L GH   V  VS  PT  + +ASA  DG 
Sbjct: 503 FGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDG- 562

Query: 311 RSVRVWVQD 313
            ++R+W  D
Sbjct: 563 -TIRIWGLD 562

[Close]

BLAST of Cucsa.084430 vs. TAIR10
Match: AT1G71840.1 (AT1G71840.1 transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 129.0 bits (323), Expect = 5.0e-30
Identity = 91/297 (30.64%), Postives = 144/297 (48.48%), Query Frame = 1


Query: 18  LTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRLVGHSEGISDLAWSSDSH 77
           L  H  +VSC+ FS DG LLAS  LD  + I+ +SS TL+  L G   GI  + W    H
Sbjct: 109 LPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGH 168

Query: 78  YICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQSNLIVSGSFDETIRIWEV 137
            + + S+D +L +W+A       +    GH+  V C +F P   LI +GS D ++ +W  
Sbjct: 169 IVLAGSEDCSLWMWNADKEA--YLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNP 228

Query: 138 KTGKCLHVIRA---HSMPVTSVHFNRDGSLIVSGSHDGSCKIWDASSGTCLKTLIDDKVP 197
           KT + +H+++    H+  +T +  N + SL +SGS DGS  I +  +G  + +L +    
Sbjct: 229 KTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSL-NSHTD 288

Query: 198 AVSFAKFSPNGKFI-LVAT--LNDTLKLWN--YSAGKFLKIYTGHVNRVHCVVSTFSVTN 257
           +V   KFSP+   I L AT  ++  L +W+  +S  +F+            V S   +  
Sbjct: 289 SVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFI------CEHEEGVTSLTWIGT 348

Query: 258 GKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDGDRSV 307
            KY+ +G  +  V IWD      +    GH D V ++S     + I S  +D    V
Sbjct: 349 SKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARV 396

HSP 2 Score: 93.2 bits (230), Expect = 3.1e-19
Identity = 64/254 (25.20%), Postives = 113/254 (44.49%), Query Frame = 1


Query: 58  HRLVGHSEGISDLAWS-SDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNF 117
           H   GH   +  LA S +D+  + +   D    +W  +   G+    L GH D V C+ F
Sbjct: 64  HTFTGHKGELYALACSPTDATLVATGGGDDKAFLW--KIGNGDWAAELPGHKDSVSCLAF 123

Query: 118 NPQSNLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKI 177
           +    L+ SG  D  ++I++  +G    V+      +  V ++  G ++++GS D S  +
Sbjct: 124 SYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWM 183

Query: 178 WDASSGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVN 237
           W+A     L       +  V+   F+P+GK I   + + +L +WN    + + I  GH  
Sbjct: 184 WNADKEAYLNMFSGHNL-NVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPY 243

Query: 238 RVHCVVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIA 297
               +      +N    +SGS+D  V+I ++    ++  L  HTD V  V   P+   I 
Sbjct: 244 HTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIP 303

Query: 298 SAGLDG-DRSVRVW 310
            A   G D+ + +W
Sbjct: 304 LAATGGMDKKLIIW 314

[Close]

BLAST of Cucsa.084430 vs. NCBI nr
Match: gi|778727686|ref|XP_011659300.1| (PREDICTED: COMPASS-like H3K4 histone methylase component WDR5B [Cucumis sativus])

HSP 1 Score: 645.2 bits (1663), Expect = 5.9e-182
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 1


Query: 1   MASGGTQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRL 60
           MASGGTQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRL
Sbjct: 1   MASGGTQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRL 60

Query: 61  VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQS 120
           VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQS
Sbjct: 61  VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQS 120

Query: 121 NLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDAS 180
           NLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDAS
Sbjct: 121 NLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDAS 180

Query: 181 SGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHC 240
           SGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHC
Sbjct: 181 SGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHC 240

Query: 241 VVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGL 300
           VVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGL
Sbjct: 241 VVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGL 300

Query: 301 DGDRSVRVWVQDP 314
           DGDRSVRVWVQDP
Sbjct: 301 DGDRSVRVWVQDP 313

[Close]

BLAST of Cucsa.084430 vs. NCBI nr
Match: gi|659100942|ref|XP_008451347.1| (PREDICTED: WD repeat-containing protein 5 [Cucumis melo])

HSP 1 Score: 642.9 bits (1657), Expect = 2.9e-181
Identity = 311/313 (99.36%), Postives = 313/313 (100.00%), Query Frame = 1


Query: 1   MASGGTQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRL 60
           MASGGTQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIW+SSSLTLRHRL
Sbjct: 1   MASGGTQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWASSSLTLRHRL 60

Query: 61  VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQS 120
           VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQS
Sbjct: 61  VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQS 120

Query: 121 NLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDAS 180
           NLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDAS
Sbjct: 121 NLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDAS 180

Query: 181 SGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHC 240
           +GTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHC
Sbjct: 181 TGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHC 240

Query: 241 VVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGL 300
           VVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGL
Sbjct: 241 VVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGL 300

Query: 301 DGDRSVRVWVQDP 314
           DGDRSVRVWVQDP
Sbjct: 301 DGDRSVRVWVQDP 313

[Close]

BLAST of Cucsa.084430 vs. NCBI nr
Match: gi|1009148695|ref|XP_015892074.1| (PREDICTED: COMPASS-like H3K4 histone methylase component WDR5B [Ziziphus jujuba])

HSP 1 Score: 579.3 bits (1492), Expect = 4.0e-162
Identity = 272/311 (87.46%), Postives = 293/311 (94.21%), Query Frame = 1


Query: 2   ASGGTQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRLV 61
           +SGG  PYKPYRHLKTL AH RAVSCVKFSNDGTLLASASLDKT+IIWSS +  L  RL 
Sbjct: 3   SSGGQAPYKPYRHLKTLQAHERAVSCVKFSNDGTLLASASLDKTVIIWSSPTFALVQRLS 62

Query: 62  GHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQSN 121
           GHSEG+SDLAWSSDSHYICSASDDRTLRIWDARS TGECVKTLRGHS+FVFCVNFNPQSN
Sbjct: 63  GHSEGVSDLAWSSDSHYICSASDDRTLRIWDARSTTGECVKTLRGHSNFVFCVNFNPQSN 122

Query: 122 LIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDASS 181
           LIVSGSFDET+R+WEVKTGKCLH+IRAH++PVTSVHFNRDGSLIVS SHDGSCKIW+A+S
Sbjct: 123 LIVSGSFDETVRVWEVKTGKCLHIIRAHALPVTSVHFNRDGSLIVSASHDGSCKIWEAAS 182

Query: 182 GTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHCV 241
           G CLKTLIDDKVPAVSFAKFSPNGKFILVAT NDTLKLWNYS GKFLKIYTGHVNRV+C+
Sbjct: 183 GKCLKTLIDDKVPAVSFAKFSPNGKFILVATHNDTLKLWNYSTGKFLKIYTGHVNRVYCI 242

Query: 242 VSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLD 301
            STFSVTNGKYIVSGSED+CVY+WDLQQKTM+QKLEGH+D VISV+CHP ENKIASAGLD
Sbjct: 243 TSTFSVTNGKYIVSGSEDRCVYLWDLQQKTMVQKLEGHSDTVISVACHPVENKIASAGLD 302

Query: 302 GDRSVRVWVQD 313
           GDR+VR+WVQD
Sbjct: 303 GDRTVRIWVQD 313

[Close]

BLAST of Cucsa.084430 vs. NCBI nr
Match: gi|567903124|ref|XP_006444050.1| (hypothetical protein CICLE_v10021263mg [Citrus clementina])

HSP 1 Score: 570.1 bits (1468), Expect = 2.4e-159
Identity = 273/312 (87.50%), Postives = 290/312 (92.95%), Query Frame = 1


Query: 1   MASGGTQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRL 60
           MA+  T PYKPYRH KTLTAH+RAVSCVKFSNDGTLLASASLDKT+IIWS+SSL L HR 
Sbjct: 1   MAAAQTPPYKPYRHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRF 60

Query: 61  VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQS 120
           VGHSEGISDLAWSSDSHYICSASDDRTLRIWDAR+P  +C+KTLRGHSDFVFCVNFNPQS
Sbjct: 61  VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPF-DCLKTLRGHSDFVFCVNFNPQS 120

Query: 121 NLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDAS 180
           NLIVSGSFDE+IRIWEVKTGKC  VIRAHSMPVTSVHFNRDGSLIVSGSHDG+CKIWDA 
Sbjct: 121 NLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAG 180

Query: 181 SGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHC 240
            G CLKTLIDDK PAVSFAKFSPNGKFILV TL+ TLKLWNYSAGKFLKIYTGH N+ +C
Sbjct: 181 EGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYC 240

Query: 241 VVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGL 300
           + STFSVTNGKYIVSGSED CVY+WDLQQKTMIQKL+GHTD VISV+CHPTENKIASAGL
Sbjct: 241 ITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGL 300

Query: 301 DGDRSVRVWVQD 313
           DGDR+VRVWVQD
Sbjct: 301 DGDRTVRVWVQD 311

[Close]

BLAST of Cucsa.084430 vs. NCBI nr
Match: gi|703076747|ref|XP_010090413.1| (WD repeat-containing protein 5 [Morus notabilis])

HSP 1 Score: 567.0 bits (1460), Expect = 2.0e-158
Identity = 268/314 (85.35%), Postives = 290/314 (92.36%), Query Frame = 1


Query: 1   MASGGTQ--PYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRH 60
           MAS G +  PYKPYR LK L  H RAVSCVKFSNDGTLLASASLDKT++IWSS++L+L H
Sbjct: 1   MASSGQEAPPYKPYRQLKILRGHERAVSCVKFSNDGTLLASASLDKTVVIWSSATLSLLH 60

Query: 61  RLVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNP 120
           RLVGHSEG+SD+AWSSDSHYIC+ASDDRTLRIWDARSP GECVKTLRGHS+FVFCVNFN 
Sbjct: 61  RLVGHSEGVSDVAWSSDSHYICTASDDRTLRIWDARSPGGECVKTLRGHSNFVFCVNFNS 120

Query: 121 QSNLIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWD 180
           QSNLIVSGSFD+TIR+WEVKTGKCLH IRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWD
Sbjct: 121 QSNLIVSGSFDDTIRVWEVKTGKCLHTIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWD 180

Query: 181 ASSGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRV 240
            +SGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYS G+FLK+Y GHVN+ 
Sbjct: 181 TASGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSTGRFLKVYAGHVNKE 240

Query: 241 HCVVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASA 300
           +C+ STFSVTNGKYIVSGSED+CVY+WDLQ K M+QKLEGHT  VISVSCHPTENKIASA
Sbjct: 241 YCITSTFSVTNGKYIVSGSEDRCVYLWDLQHKNMVQKLEGHTGTVISVSCHPTENKIASA 300

Query: 301 GLDGDRSVRVWVQD 313
           GLD D SVR+WVQD
Sbjct: 301 GLDNDISVRIWVQD 314

The following BLAST results are available for this feature:

BLAST of Cucsa.084430 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WDR5B_ARATH	7.8e-142	76.13	COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana GN=W...	[more]
WDR5_MOUSE	2.6e-113	64.38	WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=1 SV=1	[more]
WDR5_HUMAN	2.6e-113	64.38	WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1	[more]
WDR5_BOVIN	2.6e-113	64.38	WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1	[more]
WDR5_RAT	2.6e-113	64.38	WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=1 SV=1	[more]

BLAST of Cucsa.084430 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8V6_CUCSA	4.1e-182	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G388400 PE=4 SV=1	[more]
V4TZU9_9ROSI	1.7e-159	87.50	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021263mg PE=4 SV=1	[more]
A0A067FRE9_CITSI	1.7e-159	87.50	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021459mg PE=4 SV=1	[more]
W9QVN4_9ROSA	1.4e-158	85.35	WD repeat-containing protein 5 OS=Morus notabilis GN=L484_025079 PE=4 SV=1	[more]
M5VQ04_PRUPE	9.2e-158	85.13	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008858mg PE=4 SV=1	[more]

BLAST of Cucsa.084430 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02730.1	4.4e-143	76.13	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	2.0e-111	61.74	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G64730.1	6.8e-35	28.62	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G08560.1	2.4e-32	31.07	transducin family protein / WD-40 repeat family protein	[more]
AT1G71840.1	5.0e-30	30.64	transducin family protein / WD-40 repeat family protein	[more]

BLAST of Cucsa.084430 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778727686\|ref\|XP_011659300.1\|	5.9e-182	100.00	PREDICTED: COMPASS-like H3K4 histone methylase component WDR5B [Cucumis sativus]	[more]
gi\|659100942\|ref\|XP_008451347.1\|	2.9e-181	99.36	PREDICTED: WD repeat-containing protein 5 [Cucumis melo]	[more]
gi\|1009148695\|ref\|XP_015892074.1\|	4.0e-162	87.46	PREDICTED: COMPASS-like H3K4 histone methylase component WDR5B [Ziziphus jujuba]	[more]
gi\|567903124\|ref\|XP_006444050.1\|	2.4e-159	87.50	hypothetical protein CICLE_v10021263mg [Citrus clementina]	[more]
gi\|703076747\|ref\|XP_010090413.1\|	2.0e-158	85.35	WD repeat-containing protein 5 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom
IPR019775	WD40_repeat_CS
IPR020472	G-protein_beta_WD-40_rep

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0016459	myosin complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016905	myosin heavy chain kinase activity
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.084430.1	Cucsa.084430.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 225..266 score: 7.3E-7coord: 13..50 score: 1.3E-7coord: 58..92 score: 1.0E-8coord: 184..221 score: 0.11coord: 98..135 score: 7.8E-10coord: 273..309 score: 0.0026coord: 140..178 score: 5.6
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 139..178 score: 7.7E-13coord: 97..136 score: 2.8E-12coord: 224..266 score: 9.3E-4coord: 11..50 score: 1.5E-10coord: 269..310 score: 8.5E-5coord: 181..221 score: 0.03coord: 53..92 score: 3.3
IPR001680	WD40 repeat	PROFILE	PS50082	WD_REPEATS_2	coord: 18..59 score: 13.817coord: 60..95 score: 15.521coord: 104..145 score: 18.195coord: 189..230 score: 9.406coord: 146..187 score: 16.858coord: 231..275 score: 11
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	G3DSA:2.130.10.10		coord: 11..309 score: 7.7
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 18..313 score: 67
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 9..309 score: 4.12
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 79..93 score: -coord: 253..267 score: -coord: 165..179 score: -coord: 123..137 scor
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 79..93 score: 4.9E-9coord: 165..179 score: 4.9E-9coord: 123..137 score: 4.
None	No IPR available	PIR	PIRSF002394	GNBP_B	coord: 3..311 score: 4.6
None	No IPR available	PANTHER	PTHR22847	WD40 REPEAT PROTEIN	coord: 20..309 score: 3.2
None	No IPR available	PANTHER	PTHR22847:SF461	SUBFAMILY NOT NAMED	coord: 20..309 score: 3.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.084430	Cla014769	Watermelon (97103) v1	cgywmB094
Cucsa.084430	Csa7G388400	Cucumber (Chinese Long) v2	cgycuB085
Cucsa.084430	MELO3C015824	Melon (DHL92) v3.5.1	cgymeB093
Cucsa.084430	ClCG09G007120	Watermelon (Charleston Gray)	cgywcgB091
Cucsa.084430	CSPI07G16280	Wild cucumber (PI 183967)	cgycpiB088
Cucsa.084430	CmaCh08G003430	Cucurbita maxima (Rimu)	cgycmaB0158
Cucsa.084430	CmoCh08G003390	Cucurbita moschata (Rifu)	cgycmoB0153
Cucsa.084430	Lsi02G022850	Bottle gourd (USVL1VR-Ls)	cgylsiB090
Cucsa.084430	Cp4.1LG17g06450	Cucurbita pepo (Zucchini)	cgycpeB0153
Cucsa.084430	MELO3C015824.2	Melon (DHL92) v3.6.1	cgymedB091
Cucsa.084430	CsaV3_7G028040	Cucumber (Chinese Long) v3	cgycucB087
Cucsa.084430	Cla97C09G169720	Watermelon (97103) v2	cgywmbB089
Cucsa.084430	Bhi09G000899	Wax gourd	cgywgoB104
Cucsa.084430	Carg24885	Silver-seed gourd	carcgyB0063

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.084430	Watermelon (97103) v2	cgywmbB087
Cucsa.084430	Wax gourd	cgywgoB105
Cucsa.084430	Cucurbita maxima (Rimu)	cgycmaB0157
Cucsa.084430	Cucurbita moschata (Rifu)	cgycmoB0152
Cucsa.084430	Watermelon (Charleston Gray)	cgywcgB092
Cucsa.084430	Watermelon (97103) v1	cgywmB095
Cucsa.084430	Cucurbita pepo (Zucchini)	cgycpeB0151
Cucsa.084430	Bottle gourd (USVL1VR-Ls)	cgylsiB089
Cucsa.084430	Silver-seed gourd	carcgyB0075
Cucsa.084430	Silver-seed gourd	carcgyB0129
Cucsa.084430	Silver-seed gourd	carcgyB0380
Cucsa.084430	Silver-seed gourd	carcgyB0842