Carg24885 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24885
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	WD repeat-containing protein 5
Location	Cucurbita_argyrosperma_scaffold_272 : 57704 .. 61879 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTACAGTGCCGGAATTTTGCAGCAACTTGCTCGCCGACTCTCTTCTATGGCAAGCGGCGGCGGAAATCAACAGCAACCGTACAAACCCTACCGGCATCTGAAAACCTTGACGGCACACACACGCGCCGTCTCCTGTGTCAAATTCTCTAATGATGGAACTCTCTTAGCTTCCGCTTCTCTCGACAAAACCCTAATCATCTGGTCCTCTTCCTCCCTCACCCTTCGCCACCGCCTCGTTGGCCACTCCGAAGGCATCTCTGATCTCGCCTGGTCTTCCGATTCCCATTACATTTGTTCCGCCTCCGACGATCGCACTCTCCGCATTTGGGACGCGCGTTCTTCCACCGGCGAGTGCGTCAAAACCCTACGAGGTCATTCCGATTTTGTATTCTGCGTCAATTTCAATCCTCAATCTAATTTCATTGTTTCGGGTTCCTTTGATGAGACGATTCGGATTTGGGAGGTGAAGACGGGCAAGTGCCTTCATGTTATAAGGGCTCACTCTATGCCTGTTACTTCTGTTCATTTTAATCGTGATGGTTCGCTTATTGTTTCTGGTAGTCATGATGGTTCGTGTAAGATTTGGGACGCTTCTACTGGGACGTGCTTGAAGACTCTAATTGATGATAAGGTCCCTGCTGTATCGTTTGCTAAGTTCTCGCCCAATGGCAAGTTTATACTTGTTGCTACTCTCAATGATACCCTTGTAAGTTTTCAGACTGAGGTCTTTTGCTTATTGGCTTTTAATTTTTTTGAGTTTTGAAATTGATTTCTTGATGATATGATGCTGGTTGGCTGTTGATTATTGAAACCATTGAGATTGCTGGAAATATCGCAATGCTATTTTCAGAATGGAATTTTGTAAGGAAAGAGGAAACTGCGAGCTAATCTTGTTGAGGGTATAAGTACCATGTTGGCTAATTAGGAGGAAGATCATGGGTTTCTAATTAGGAGCTAATTAGGAGGAAGATCGTGGGTTTCTAATTAGGAGCTAATTAAGAGGAAGATCGTGGGTTTCTAATTAGGAGGAAGATCGTGGGTTTCTAATTAAGACGTGGGCTAACGTTGGCTAATTAGGAGGAAGATCGTGGGTTTATAAGTACCACGTTGGCTAATTAGGAGGAAGATCGTGGGTTTATAAGTACCACGTTGGCTAATTAGGAGGAAGATCATGGGTTTATAAGTACCACGTTGGCTAATTAGGAGGAAGATCATGGGTTTATAATTACCACGTTGGCTAATTAGGATGAAGATCATGAGTTTATAAGTAAGGAACACTATCTCCATTGGTAGGAAGTCTTTTGGGGAAACCAAAAGCAAAGCCATCAGAGCTTATGCTCTAAGTGGACAATATCATACCATTGTGGAGATTCGTGATTTCCAACAGATCTGAGGGATTTTCTGGATCATAAACGTTCCTACTGTTTTTTCCATCTAGAATAAGAATGTGCTATCAATTCATGCTCGCACGGTCTTCTCGTTTGCCTATTTTTCCTTCTACTTCGCTCCTACAAAACAACTGTCCTACTCTGAAACTAGCTTAAGCCCCAAATCACCCACCAAATTATTCAAGATATTTCATGTCCTAATGCCTGCCCACCCCTTTGGCATGATCCGATAATCCACGTTTAGAGAAGAAAACTGAAGGCATTTGCAGGAAACCCTTATTTGAATACCGAAGGAGGAACCTTTTTGGGCTGTTTAAGTTTCTAGCAATGGTGCACTATCAGTCTTCTTAATGTTTCTAACTTCTTAGTGAAATTAGATGAAGATTGATTTCTTAAATTTTCTACTTAGAGGATTGATTAAATATGTATTGTGGTGTGGTTTCTTAAACCAGTTGAGTCATATGGTGACATTCCAGGATCAGGGGTTTTAACTTAGAACAGACAAAGTTCAGAATGATTAATCCCGTTGTATCCTTGATTACATTCCAGTCGATTAAAAGCATAGGATATTGAGCTTCAGGACATTTGAAAATTCTGAATTATTAAGATTCTGAAATTATTCCGAACTGCTTATTATATTATGTCTGCAGGATATAAGAACATTAAAATTTATGGGCATACTCAATAGATTTGGTGTATATTTTTGGGATATATAGATCTGTCAACTCCACAAAATTTAGCGTAATCATATCTCGTCTATAGTCAATTTGAAGATTTCCAGTTCCTGTCTTCTTAATTTGTGCTACAAGTCTATGAACTATGTGCAGTATGTAGCTCCCAACTTGTCTGGTTTTTTTACGAGAAAGTCAGCCTTCATTGAGATAAAATGAACGAATAGAAGAATAACCTCGAGTAACTAGCTCGAGTATGACAATGTCTGAAGGATTGGCTTTTTCTGAAGTATAAGAAGAACAAGCTCGAGTATCTAGTTTTGGTGATTAACAACCAACTAAGTTCACCCTACTTAGAATTTTTATATTTAGAATGTTCTGTTGGCTAGATCAAATATAGTCCTTCGCAACTTGGTATTCAAAAACTACGGAATTTTGTTGGAGAGAAGTAGCAATTGTGATTTTGTATTCATATGATTAAGTGCAGCTTTATACCGGTAGTTGACACAATTAGTGTAATAGCTTTTGTGATGCACACTTCTTTTAACTTGTATTTTGTATTTGGGGTTGCAGAAGCTATGGAACTACTCAGCTGGGAAGTTTTTGAAGATATATACGGGACACGTGAATAGAGTCCATTGCATCGTGTCCACGTTTTCTGTCACGAATGGAAAATACATCGTCAGTGGATCGGAGGATAAATGTGTGTACATATGGGATCTACAGCAGAAAACCATGATTCAGAAACTTGAAGGCCACACTGATGTTGTCATTTCTGTATCCTGTCACCCAACTGAGAACAAGATTGCATCTGCAGGACTTGATGGGGATAGATCAGTGAGGGTGTGGGTTCAAGATTCATGACACGCTGATCGTTCGACATCTTTGCATCGTTAACCAGAGGCAAGTTAAGGAAACAAGACCTGAGGAGAAGCTGTACAATCTGCAATGATTTCTGAATAATGTTTTCTACGGATACGGTGCAACCAGGCATCGTGAATCGATTTCTCTGGCAGTTGTATATATGAACGCAGGTACGGAGTGTCGTTATCTTTTTTCCTGTGACAATTGATCCCTTAACATAGAGTAATTGTATTCTTAAATGTGGAACTGGGAATCTGATTATAGTTGGTGAGGAAATGGAATGAGTTTTCACTAGAGATGGCAAAATAGTTTTCAATAATTCTTAGCTCAACATCAGACATAGCAATTCTCCTCTTTGGCATCGTGTGTGCTTTTTTAGAGAAAATTACAAACTGGGAATGGTAAAGCACATTTTATGTATCACAATTATGTAGATGCTGAAGCATGTGGTCTTTAAGTTTGTTTGAACTTTTAGGTGAGCCTGATAAGAAAAAATGATTCTTGATGTCTCCTTGGTTCGGGTTTTGGTAGAGCACGGGTGCCCCTAGATTAGTAGGGTATGGCTCCGATGAGTTGATTTACAACAAATCTAGACGTTTCAGAGTTTTTTTCTTTTCTTTTTTTCGCTTTTTCTTTGGAGACTTCCACAAACATTAACGAATGGTGAATTATAGCCCTCCAATCGACGTGAAGGTCTCCTCTTATCCAACTATCTCTTTGTAGGGAGGTCAATGGTAATATATCACTCTAGCTTAACGAGTATACTTTGGAGAATCCAGCTACATGACAATTAAGAACGCAGGGCTTCTCTCCCTTTTATGTTCGTTTTTTTATGTCTTAAGAATGAGTGATTGTCCTTGCACTACACGCCTTCTTTACATCTTTTGGCCCGCCTAACCAGCACATCTTTCTCCAGAGAAGTAAAGCAGCCCGCTCGCTCGAAATCTATGTTGTGTATCACACTCATTTTCTATATGAGAATAGAATTTATTTGATCTAACAAAACTCATCATCAACGATCCAAAATTTCAAATTGAGATTTCAAATTGAGATCCCACGAGAAAAAAGAAAAAGTGGAATGTAGCTTAGGATGTGCAATTGATAGACAAATGAGAACAAAGGCAAAGGTAGATTTCTATATCATGTGTGGAAAAATAAATAAAATAAAATAAAATAAAATACCTTTTGAACTCCAAAAAAGAAAAATTAAGCACAAGTCAATAGTAAGTGAGGTTGGTTCGAACCTTTTTA

mRNA sequence

ACTTACAGTGCCGGAATTTTGCAGCAACTTGCTCGCCGACTCTCTTCTATGGCAAGCGGCGGCGGAAATCAACAGCAACCGTACAAACCCTACCGGCATCTGAAAACCTTGACGGCACACACACGCGCCGTCTCCTGTGTCAAATTCTCTAATGATGGAACTCTCTTAGCTTCCGCTTCTCTCGACAAAACCCTAATCATCTGGTCCTCTTCCTCCCTCACCCTTCGCCACCGCCTCGTTGGCCACTCCGAAGGCATCTCTGATCTCGCCTGGTCTTCCGATTCCCATTACATTTGTTCCGCCTCCGACGATCGCACTCTCCGCATTTGGGACGCGCGTTCTTCCACCGGCGAGTGCGTCAAAACCCTACGAGGTCATTCCGATTTTGTATTCTGCGTCAATTTCAATCCTCAATCTAATTTCATTGTTTCGGGTTCCTTTGATGAGACGATTCGGATTTGGGAGGTGAAGACGGGCAAGTGCCTTCATGTTATAAGGGCTCACTCTATGCCTGTTACTTCTGTTCATTTTAATCGTGATGGTTCGCTTATTGTTTCTGGTAGTCATGATGGTTCGTGTAAGATTTGGGACGCTTCTACTGGGACGTGCTTGAAGACTCTAATTGATGATAAGGTCCCTGCTGTATCGTTTGCTAAGTTCTCGCCCAATGGCAAGTTTATACTTGTTGCTACTCTCAATGATACCCTTAAGCTATGGAACTACTCAGCTGGGAAGTTTTTGAAGATATATACGGGACACGTGAATAGAGTCCATTGCATCGTGTCCACGTTTTCTGTCACGAATGGAAAATACATCGTCAGTGGATCGGAGGATAAATGTGTGTACATATGGGATCTACAGCAGAAAACCATGATTCAGAAACTTGAAGGCCACACTGATGTTGTCATTTCTGTATCCTGTCACCCAACTGAGAACAAGATTGCATCTGCAGGACTTGATGGGGATAGATCAGTGAGGGTGTGGGTTCAAGATTCATGACACGCTGATCGTTCGACATCTTTGCATCGTTAACCAGAGGCAAGTTAAGGAAACAAGACCTGAGGAGAAGCTGTACAATCTGCAATGATTTCTGAATAATGTTTTCTACGGATACGGTGCAACCAGGCATCGTGAATCGATTTCTCTGGCAGTTGTATATATGAACGCAGGTACGGAGTGTCGTTATCTTTTTTCCTGTGACAATTGATCCCTTAACATAGAGTAATTGTATTCTTAAATGTGGAACTGGGAATCTGATTATAGTTGGTGAGGAAATGGAATGAGTTTTCACTAGAGATGGCAAAATAGTTTTCAATAATTCTTAGCTCAACATCAGACATAGCAATTCTCCTCTTTGGCATCGTGTGTGCTTTTTTAGAGAAAATTACAAACTGGGAATGGTAAAGCACATTTTATGTATCACAATTATGTAGATGCTGAAGCATGTGGTCTTTAAGTTTGTTTGAACTTTTAGGTGAGCCTGATAAGAAAAAATGATTCTTGATGTCTCCTTGGTTCGGGTTTTGGTAGAGCACGGGTGCCCCTAGATTAGTAGGGTATGGCTCCGATGAGTTGATTTACAACAAATCTAGACGTTTCAGAGTTTTTTTCTTTTCTTTTTTTCGCTTTTTCTTTGGAGACTTCCACAAACATTAACGAATGGTGAATTATAGCCCTCCAATCGACGTGAAGGTCTCCTCTTATCCAACTATCTCTTTGTAGGGAGGTCAATGGTAATATATCACTCTAGCTTAACGAGTATACTTTGGAGAATCCAGCTACATGACAATTAAGAACGCAGGGCTTCTCTCCCTTTTATGTTCGTTTTTTTATGTCTTAAGAATGAGTGATTGTCCTTGCACTACACGCCTTCTTTACATCTTTTGGCCCGCCTAACCAGCACATCTTTCTCCAGAGAAGTAAAGCAGCCCGCTCGCTCGAAATCTATGTTGTGTATCACACTCATTTTCTATATGAGAATAGAATTTATTTGATCTAACAAAACTCATCATCAACGATCCAAAATTTCAAATTGAGATTTCAAATTGAGATCCCACGAGAAAAAAGAAAAAGTGGAATGTAGCTTAGGATGTGCAATTGATAGACAAATGAGAACAAAGGCAAAGGTAGATTTCTATATCATGTGTGGAAAAATAAATAAAATAAAATAAAATAAAATACCTTTTGAACTCCAAAAAAGAAAAATTAAGCACAAGTCAATAGTAAGTGAGGTTGGTTCGAACCTTTTTA

Coding sequence (CDS)

ACTTACAGTGCCGGAATTTTGCAGCAACTTGCTCGCCGACTCTCTTCTATGGCAAGCGGCGGCGGAAATCAACAGCAACCGTACAAACCCTACCGGCATCTGAAAACCTTGACGGCACACACACGCGCCGTCTCCTGTGTCAAATTCTCTAATGATGGAACTCTCTTAGCTTCCGCTTCTCTCGACAAAACCCTAATCATCTGGTCCTCTTCCTCCCTCACCCTTCGCCACCGCCTCGTTGGCCACTCCGAAGGCATCTCTGATCTCGCCTGGTCTTCCGATTCCCATTACATTTGTTCCGCCTCCGACGATCGCACTCTCCGCATTTGGGACGCGCGTTCTTCCACCGGCGAGTGCGTCAAAACCCTACGAGGTCATTCCGATTTTGTATTCTGCGTCAATTTCAATCCTCAATCTAATTTCATTGTTTCGGGTTCCTTTGATGAGACGATTCGGATTTGGGAGGTGAAGACGGGCAAGTGCCTTCATGTTATAAGGGCTCACTCTATGCCTGTTACTTCTGTTCATTTTAATCGTGATGGTTCGCTTATTGTTTCTGGTAGTCATGATGGTTCGTGTAAGATTTGGGACGCTTCTACTGGGACGTGCTTGAAGACTCTAATTGATGATAAGGTCCCTGCTGTATCGTTTGCTAAGTTCTCGCCCAATGGCAAGTTTATACTTGTTGCTACTCTCAATGATACCCTTAAGCTATGGAACTACTCAGCTGGGAAGTTTTTGAAGATATATACGGGACACGTGAATAGAGTCCATTGCATCGTGTCCACGTTTTCTGTCACGAATGGAAAATACATCGTCAGTGGATCGGAGGATAAATGTGTGTACATATGGGATCTACAGCAGAAAACCATGATTCAGAAACTTGAAGGCCACACTGATGTTGTCATTTCTGTATCCTGTCACCCAACTGAGAACAAGATTGCATCTGCAGGACTTGATGGGGATAGATCAGTGAGGGTGTGGGTTCAAGATTCATGA

Protein sequence

TYSAGILQQLARRLSSMASGGGNQQQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRLVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARSSTGECVKTLRGHSDFVFCVNFNPQSNFIVSGSFDETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDASTGTCLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDGDRSVRVWVQDS

Homology

[Close]

BLAST of Carg24885 vs. NCBI nr
Match: XP_022960443.1 (COMPASS-like H3K4 histone methylase component WDR5B [Cucurbita moschata] >XP_023514520.1 COMPASS-like H3K4 histone methylase component WDR5B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.0 bits (850), Expect = 2.3e-87
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0


Query: 17  MASGGGNQQQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLR 76
           MASGGGNQQQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLR
Sbjct: 1   MASGGGNQQQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLR 60

Query: 77  HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGECVKTXXXXXXXXXXXXXX 136
           HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGECVKTXXXXXXXXXXXXXX
Sbjct: 61  HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGECVKTXXXXXXXXXXXXXX 120

Query: 137 XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 196
           XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 197 XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR 256
           XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR 240

Query: 257 VHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS 316
           VHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS
Sbjct: 241 VHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS 300

Query: 317 AGLDGDRSVRVWVQDS 333
           AGLDGDRSVRVWVQDS
Sbjct: 301 AGLDGDRSVRVWVQDS 316

[Close]

BLAST of Carg24885 vs. NCBI nr
Match: XP_023004736.1 (COMPASS-like H3K4 histone methylase component WDR5B [Cucurbita maxima])

HSP 1 Score: 328.6 bits (841), Expect = 2.5e-86
Identity = 314/316 (99.37%), Postives = 315/316 (99.68%), Query Frame = 0


Query: 17  MASGGGNQQQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLR 76
           MASGGGNQQQ YKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLR
Sbjct: 1   MASGGGNQQQAYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLR 60

Query: 77  HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGECVKTXXXXXXXXXXXXXX 136
           HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGECVKTXXXXXXXXXXXXXX
Sbjct: 61  HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGECVKTXXXXXXXXXXXXXX 120

Query: 137 XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 196
           XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 197 XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR 256
           XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR 240

Query: 257 VHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS 316
           VHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS
Sbjct: 241 VHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS 300

Query: 317 AGLDGDRSVRVWVQDS 333
           AGLDGDRSVRVW+QDS
Sbjct: 301 AGLDGDRSVRVWIQDS 316

[Close]

BLAST of Carg24885 vs. NCBI nr
Match: XP_011659300.1 (PREDICTED: COMPASS-like H3K4 histone methylase component WDR5B [Cucumis sativus] >KGN44807.1 hypothetical protein Csa_7G388400 [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 1.3e-82
Identity = 309/315 (98.10%), Postives = 310/315 (98.41%), Query Frame = 0


Query: 17  MASGGGNQQQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLR 76
           MASGG    QPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLR
Sbjct: 1   MASGG---TQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLR 60

Query: 77  HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGECVKTXXXXXXXXXXXXXX 136
           HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GECVKTXXXXXXXXXXXXXX
Sbjct: 61  HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGECVKTXXXXXXXXXXXXXX 120

Query: 137 XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 196
           XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 197 XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR 256
           XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR 240

Query: 257 VHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS 316
           VHC+VSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS
Sbjct: 241 VHCVVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS 300

Query: 317 AGLDGDRSVRVWVQD 332
           AGLDGDRSVRVWVQD
Sbjct: 301 AGLDGDRSVRVWVQD 312

[Close]

BLAST of Carg24885 vs. NCBI nr
Match: XP_008451347.1 (PREDICTED: COMPASS-like H3K4 histone methylase component WDR5B [Cucumis melo])

HSP 1 Score: 315.1 bits (806), Expect = 2.9e-82
Identity = 308/315 (97.78%), Postives = 310/315 (98.41%), Query Frame = 0


Query: 17  MASGGGNQQQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLR 76
           MASGG    QPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIW+SSSLTLR
Sbjct: 1   MASGG---TQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWASSSLTLR 60

Query: 77  HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGECVKTXXXXXXXXXXXXXX 136
           HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GECVKTXXXXXXXXXXXXXX
Sbjct: 61  HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGECVKTXXXXXXXXXXXXXX 120

Query: 137 XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 196
           XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 197 XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR 256
           XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR 240

Query: 257 VHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS 316
           VHC+VSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS
Sbjct: 241 VHCVVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS 300

Query: 317 AGLDGDRSVRVWVQD 332
           AGLDGDRSVRVWVQD
Sbjct: 301 AGLDGDRSVRVWVQD 312

[Close]

BLAST of Carg24885 vs. NCBI nr
Match: XP_022150234.1 (COMPASS-like H3K4 histone methylase component WDR5B [Momordica charantia])

HSP 1 Score: 299.7 bits (766), Expect = 1.3e-77
Identity = 296/315 (93.97%), Postives = 304/315 (96.51%), Query Frame = 0


Query: 17  MASGGGNQQQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLR 76
           MASGGGNQQQP+KPYRHL+TLTAHT AVSCVKFSNDGTLLASASLDKTLIIWSS+SLTLR
Sbjct: 1   MASGGGNQQQPHKPYRHLRTLTAHTGAVSCVKFSNDGTLLASASLDKTLIIWSSTSLTLR 60

Query: 77  HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGECVKTXXXXXXXXXXXXXX 136
           HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GECVKTXXXXXXXXXXXXXX
Sbjct: 61  HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGECVKTXXXXXXXXXXXXXX 120

Query: 137 XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 196
           XXXXXXXXXXXXXXXXXXX KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 197 XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR 256
           XXXXXXXXXXXXXXXXXXXXF KFSPNGKFILVATLNDTLKLWNYS GK LKIYTGH+NR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXFTKFSPNGKFILVATLNDTLKLWNYSTGKSLKIYTGHLNR 240

Query: 257 VHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS 316
            +CIVSTFSVTNGKYI+SGSEDKC+YIWDLQ K MIQKLEGHTD VISVSCHPTENKIAS
Sbjct: 241 TYCIVSTFSVTNGKYIISGSEDKCIYIWDLQGKNMIQKLEGHTDAVISVSCHPTENKIAS 300

Query: 317 AGLDGDRSVRVWVQD 332
           AGL+ DRSVRVWVQD
Sbjct: 301 AGLEADRSVRVWVQD 315

[Close]

BLAST of Carg24885 vs. TAIR10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 215.7 bits (548), Expect = 4.3e-56
Identity = 221/305 (72.46%), Postives = 248/305 (81.31%), Query Frame = 0


Query: 28  YKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRXXXXXXXXX 87
           YKPYRHLKTL  HT A+SCVKFSNDG LLASAS+DKT+I+WS+++ +L   XXXXXXXXX
Sbjct: 30  YKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLXXXXXXXXXXXX 89

Query: 88  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGECVKTXXXXXXXXXXXXXXXXXXXXXXXXX 147
           XXXXXXXXXXXXXXXXXXXXXXXXXX    EC+K                    XXXXXX
Sbjct: 90  XXXXXXXXXXXXXXXXXXXXXXXXXXSPY-ECLKVLRGHTNFVFCVNFNPPSNLXXXXXX 149

Query: 148 XXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 207
           XXXXXXX VK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 150 XXXXXXXEVKTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 209

Query: 208 XXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHCIVSTFSVT 267
           XXX      FAKFSPNGKFILVATL+ TLKL NY+ GKFLK+YTGH N+V CI S FSVT
Sbjct: 210 XXXKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVT 269

Query: 268 NGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDGDRSVRV 327
           NGKYIVSGSED CVY+WDLQ + ++Q+LEGHTD VISVSCHP +N+I+S+G   D+++R+
Sbjct: 270 NGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRI 329

Query: 328 WVQDS 333
           W QD+
Sbjct: 330 WKQDA 333

[Close]

BLAST of Carg24885 vs. TAIR10
Match: AT5G64730.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 2.0e-13
Identity = 37/109 (33.94%), Postives = 64/109 (58.72%), Query Frame = 0


Query: 221 SPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHCIVSTFSVTNG-KYIVSGSEDK 280
           S +G  +L   L+ TL+L + + G+ L++Y GH+++     +   +TN   +++ GSED 
Sbjct: 193 SNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISK--SFKTDCCLTNSDAHVIGGSEDG 252

Query: 281 CVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDGDRSVRVW 329
            V+ WDL    ++ K   H  VV SVS HP E+ + ++ +DG  ++RVW
Sbjct: 253 LVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDG--TIRVW 297

[Close]

BLAST of Carg24885 vs. TAIR10
Match: AT5G08560.1 (transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 70.5 bits (171), Expect = 2.2e-12
Identity = 44/113 (38.94%), Postives = 57/113 (50.44%), Query Frame = 0


Query: 221 SPNGKFILVATLNDTLKLWNYSAG-KFLKIYTGHVNRVHCIVSTFSVTNGKYIVSGSEDK 280
           S + K+ILV  LN  ++LWN     K +  Y GH      I S F      +I SGSED 
Sbjct: 452 SNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDS 511

Query: 281 CVYIWDLQQKTMIQKLEGHTDVVISVSCHPTE-NKIASAGLDGDRSVRVWVQD 332
            VYIW      +I +L GH   V  VS  PT  + +ASA  DG  ++R+W  D
Sbjct: 512 QVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDG--TIRIWGLD 562

[Close]

BLAST of Carg24885 vs. TAIR10
Match: AT5G43920.1 (transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-10
Identity = 36/110 (32.73%), Postives = 62/110 (56.36%), Query Frame = 0


Query: 221 SPNGKFILVATLNDTLKLWNYSAGKFLK--IYTGHVNRVHCIVSTFSVTNGKYIVSGSED 280
           S +GKF +V      + LW+  AG++ +   ++GH    + I S F   +  +I SGSED
Sbjct: 406 SGDGKFFIVNLSCQEIHLWDL-AGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSED 465

Query: 281 KCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDGDRSVRVW 329
             VYIW+L+    ++ L GH+  V  VS +P   ++ ++  D D+++R+W
Sbjct: 466 SQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASD-DQTIRIW 513

[Close]

BLAST of Carg24885 vs. TAIR10
Match: AT1G79990.1 (structural molecules)

HSP 1 Score: 61.6 bits (148), Expect = 1.0e-09
Identity = 30/80 (37.50%), Postives = 47/80 (58.75%), Query Frame = 0


Query: 230 ATLNDTLKLWNYSAGKFLKIYTGHVNRVHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQK 289
           A+L+ T+K+WN  +         H+  V+C V  F+  +  Y+++GS+D    +WD Q K
Sbjct: 376 ASLDRTIKIWNLGSPDPNFTLDAHLKGVNC-VDYFTGGDKPYLITGSDDHTAKVWDYQTK 435

Query: 290 TMIQKLEGHTDVVISVSCHP 310
           + +Q LEGHT  V +VS HP
Sbjct: 436 SCVQTLEGHTHNVSAVSFHP 454

[Close]

BLAST of Carg24885 vs. Swiss-Prot
Match: sp|Q9SY00|WDR5B_ARATH (COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana OX=3702 GN=WDR5B PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 7.8e-55
Identity = 221/305 (72.46%), Postives = 248/305 (81.31%), Query Frame = 0


Query: 28  YKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRXXXXXXXXX 87
           YKPYRHLKTL  HT A+SCVKFSNDG LLASAS+DKT+I+WS+++ +L   XXXXXXXXX
Sbjct: 30  YKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLXXXXXXXXXXXX 89

Query: 88  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGECVKTXXXXXXXXXXXXXXXXXXXXXXXXX 147
           XXXXXXXXXXXXXXXXXXXXXXXXXX    EC+K                    XXXXXX
Sbjct: 90  XXXXXXXXXXXXXXXXXXXXXXXXXXSPY-ECLKVLRGHTNFVFCVNFNPPSNLXXXXXX 149

Query: 148 XXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 207
           XXXXXXX VK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 150 XXXXXXXEVKTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 209

Query: 208 XXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHCIVSTFSVT 267
           XXX      FAKFSPNGKFILVATL+ TLKL NY+ GKFLK+YTGH N+V CI S FSVT
Sbjct: 210 XXXKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVT 269

Query: 268 NGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDGDRSVRV 327
           NGKYIVSGSED CVY+WDLQ + ++Q+LEGHTD VISVSCHP +N+I+S+G   D+++R+
Sbjct: 270 NGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRI 329

Query: 328 WVQDS 333
           W QD+
Sbjct: 330 WKQDA 333

[Close]

BLAST of Carg24885 vs. Swiss-Prot
Match: sp|Q54KL5|WDR5_DICDI (WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr5 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.2e-24
Identity = 51/84 (60.71%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 245 KFLKIYTGHVNRVHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVIS 304
           K LK YTGH N  +CI STFSVT GK+IV+GSED  +YI++LQ + ++Q L GH DVV++
Sbjct: 249 KCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLT 308

Query: 305 VSCHPTENKIASAGLDGDRSVRVW 329
           V+CHPTEN IAS  L+ DRSV++W
Sbjct: 309 VACHPTENIIASGALEKDRSVKIW 332

[Close]

BLAST of Carg24885 vs. Swiss-Prot
Match: sp|Q5M786|WDR5_XENTR (WD repeat-containing protein 5 OS=Xenopus tropicalis OX=8364 GN=wdr5 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.2e-24
Identity = 49/79 (62.03%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 253 HVNRVHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTEN 312
           H N  +CI + FSVT GK+IVSGSED  VYIW+LQ K ++QKL+GHTDVVIS +CHPTEN
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTEN 314

Query: 313 KIASAGLDGDRSVRVWVQD 332
            IASA L+ D+++++W  D
Sbjct: 315 IIASAALENDKTIKLWKSD 333

[Close]

BLAST of Carg24885 vs. Swiss-Prot
Match: sp|Q2KIG2|WDR5_BOVIN (WD repeat-containing protein 5 OS=Bos taurus OX=9913 GN=WDR5 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.6e-23
Identity = 47/74 (63.51%), Postives = 61/74 (82.43%), Query Frame = 0


Query: 258 HCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASA 317
           +CI + FSVT GK+IVSGSED  VYIW+LQ K ++QKL+GHTDVVIS +CHPTEN IASA
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASA 319

Query: 318 GLDGDRSVRVWVQD 332
            L+ D+++++W  D
Sbjct: 320 ALENDKTIKLWKSD 333

[Close]

BLAST of Carg24885 vs. Swiss-Prot
Match: sp|P61964|WDR5_HUMAN (WD repeat-containing protein 5 OS=Homo sapiens OX=9606 GN=WDR5 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.6e-23
Identity = 47/74 (63.51%), Postives = 61/74 (82.43%), Query Frame = 0


Query: 258 HCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASA 317
           +CI + FSVT GK+IVSGSED  VYIW+LQ K ++QKL+GHTDVVIS +CHPTEN IASA
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASA 319

Query: 318 GLDGDRSVRVWVQD 332
            L+ D+++++W  D
Sbjct: 320 ALENDKTIKLWKSD 333

[Close]

BLAST of Carg24885 vs. TrEMBL
Match: tr|A0A0A0K8V6|A0A0A0K8V6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G388400 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.6e-83
Identity = 309/315 (98.10%), Postives = 310/315 (98.41%), Query Frame = 0


Query: 17  MASGGGNQQQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLR 76
           MASGG    QPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLR
Sbjct: 1   MASGG---TQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLR 60

Query: 77  HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGECVKTXXXXXXXXXXXXXX 136
           HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GECVKTXXXXXXXXXXXXXX
Sbjct: 61  HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGECVKTXXXXXXXXXXXXXX 120

Query: 137 XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 196
           XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 197 XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR 256
           XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR 240

Query: 257 VHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS 316
           VHC+VSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS
Sbjct: 241 VHCVVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS 300

Query: 317 AGLDGDRSVRVWVQD 332
           AGLDGDRSVRVWVQD
Sbjct: 301 AGLDGDRSVRVWVQD 312

[Close]

BLAST of Carg24885 vs. TrEMBL
Match: tr|A0A1S3BRB8|A0A1S3BRB8_CUCME (COMPASS-like H3K4 histone methylase component WDR5B OS=Cucumis melo OX=3656 GN=LOC103492662 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.9e-82
Identity = 308/315 (97.78%), Postives = 310/315 (98.41%), Query Frame = 0


Query: 17  MASGGGNQQQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLR 76
           MASGG    QPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIW+SSSLTLR
Sbjct: 1   MASGG---TQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWASSSLTLR 60

Query: 77  HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGECVKTXXXXXXXXXXXXXX 136
           HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GECVKTXXXXXXXXXXXXXX
Sbjct: 61  HRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGECVKTXXXXXXXXXXXXXX 120

Query: 137 XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 196
           XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 197 XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR 256
           XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNR 240

Query: 257 VHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS 316
           VHC+VSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS
Sbjct: 241 VHCVVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIAS 300

Query: 317 AGLDGDRSVRVWVQD 332
           AGLDGDRSVRVWVQD
Sbjct: 301 AGLDGDRSVRVWVQD 312

[Close]

BLAST of Carg24885 vs. TrEMBL
Match: tr|A0A1S3UYT6|A0A1S3UYT6_VIGRR (COMPASS-like H3K4 histone methylase component WDR5B OS=Vigna radiata var. radiata OX=3916 GN=LOC106769944 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 6.0e-68
Identity = 227/319 (71.16%), Postives = 244/319 (76.49%), Query Frame = 0


Query: 14  LSSMASGGGNQQQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSL 73
           +++ A+ GG   Q YKPYRHLKTLT H  AVSCVKFSN+GTLLASASLDKTLIIWSS++L
Sbjct: 1   MATSANSGGGGNQTYKPYRHLKTLTGHESAVSCVKFSNNGTLLASASLDKTLIIWSSATL 60

Query: 74  TLRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGECVKTXXXXXXXXXXX 133
           +L HR                                      G+CVK            
Sbjct: 61  SLLHRLVGHSEGISDLAWSSDSDSHYICSASDDCTIRIWDATGGDCVKILRGHSDAVFCV 120

Query: 134 XXXXXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 193
              XXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 NFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 194 XXXXXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGH 253
           XXXXXXXXXXXXXXXXXXXXX  FAKFSPNGKFILVATLNDTLKLWNY +GKFLKIY+GH
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXVSFAKFSPNGKFILVATLNDTLKLWNYGSGKFLKIYSGH 240

Query: 254 VNRVHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENK 313
           VNRV+CI STFSVTNG+YIVSGSED CVY+WDLQQK MIQ+LEGHTD VISV+CHPTENK
Sbjct: 241 VNRVYCITSTFSVTNGRYIVSGSEDCCVYLWDLQQKNMIQRLEGHTDTVISVTCHPTENK 300

Query: 314 IASAGLDGDRSVRVWVQDS 333
           IASAGL  D +VRVWVQDS
Sbjct: 301 IASAGLARDATVRVWVQDS 319

[Close]

BLAST of Carg24885 vs. TrEMBL
Match: tr|A0A0L9TX13|A0A0L9TX13_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g118600 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.3e-67
Identity = 227/319 (71.16%), Postives = 244/319 (76.49%), Query Frame = 0


Query: 14  LSSMASGGGNQQQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSL 73
           +++ A+ GG   Q YKPYRHLKTLT H  AVSCVKFSN+GTLLASASLDKTLIIWSS++L
Sbjct: 1   MATSANSGGVGNQTYKPYRHLKTLTGHESAVSCVKFSNNGTLLASASLDKTLIIWSSATL 60

Query: 74  TLRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGECVKTXXXXXXXXXXX 133
           +L HR                                      G+CVK            
Sbjct: 61  SLLHRLVGHSEGISDLAWSSDSDSHYICSASDDCTIRIWDATGGDCVKILRGHSDAVFCV 120

Query: 134 XXXXXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 193
              XXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 NFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 194 XXXXXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGH 253
           XXXXXXXXXXXXXXXXXXXXX  FAKFSPNGKFILVATLNDTLKLWNY +GKFLKIY+GH
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXVSFAKFSPNGKFILVATLNDTLKLWNYGSGKFLKIYSGH 240

Query: 254 VNRVHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENK 313
           VNRV+CI STFSVTNG+YIVSGSED CVY+WDLQQK MIQ+LEGHTD VISV+CHPTENK
Sbjct: 241 VNRVYCITSTFSVTNGRYIVSGSEDCCVYLWDLQQKNMIQRLEGHTDTVISVTCHPTENK 300

Query: 314 IASAGLDGDRSVRVWVQDS 333
           IASAGL  D +VRVWVQDS
Sbjct: 301 IASAGLARDATVRVWVQDS 319

[Close]

BLAST of Carg24885 vs. TrEMBL
Match: tr|A0A0S3SRZ3|A0A0S3SRZ3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G235100 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.3e-67
Identity = 227/319 (71.16%), Postives = 244/319 (76.49%), Query Frame = 0


Query: 14  LSSMASGGGNQQQPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSL 73
           +++ A+ GG   Q YKPYRHLKTLT H  AVSCVKFSN+GTLLASASLDKTLIIWSS++L
Sbjct: 1   MATSANSGGVGNQTYKPYRHLKTLTGHESAVSCVKFSNNGTLLASASLDKTLIIWSSATL 60

Query: 74  TLRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGECVKTXXXXXXXXXXX 133
           +L HR                                      G+CVK            
Sbjct: 61  SLLHRLVGHSEGISDLAWSSDSDSHYICSASDDCTIRIWDATGGDCVKILRGHSDAVFCV 120

Query: 134 XXXXXXXXXXXXXXXXXXXXXXVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 193
              XXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 NFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 194 XXXXXXXXXXXXXXXXXXXXXXXFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGH 253
           XXXXXXXXXXXXXXXXXXXXX  FAKFSPNGKFILVATLNDTLKLWNY +GKFLKIY+GH
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXVSFAKFSPNGKFILVATLNDTLKLWNYGSGKFLKIYSGH 240

Query: 254 VNRVHCIVSTFSVTNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENK 313
           VNRV+CI STFSVTNG+YIVSGSED CVY+WDLQQK MIQ+LEGHTD VISV+CHPTENK
Sbjct: 241 VNRVYCITSTFSVTNGRYIVSGSEDCCVYLWDLQQKNMIQRLEGHTDTVISVTCHPTENK 300

Query: 314 IASAGLDGDRSVRVWVQDS 333
           IASAGL  D +VRVWVQDS
Sbjct: 301 IASAGLARDATVRVWVQDS 319

The following BLAST results are available for this feature:

BLAST of Carg24885 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960443.1	2.3e-87	100.00	COMPASS-like H3K4 histone methylase component WDR5B [Cucurbita moschata] >XP_023...	[more]
XP_023004736.1	2.5e-86	99.37	COMPASS-like H3K4 histone methylase component WDR5B [Cucurbita maxima]	[more]
XP_011659300.1	1.3e-82	98.10	PREDICTED: COMPASS-like H3K4 histone methylase component WDR5B [Cucumis sativus]...	[more]
XP_008451347.1	2.9e-82	97.78	PREDICTED: COMPASS-like H3K4 histone methylase component WDR5B [Cucumis melo]	[more]
XP_022150234.1	1.3e-77	93.97	COMPASS-like H3K4 histone methylase component WDR5B [Momordica charantia]	[more]

BLAST of Carg24885 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02730.1	4.3e-56	72.46	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G64730.1	2.0e-13	33.94	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G08560.1	2.2e-12	38.94	transducin family protein / WD-40 repeat family protein	[more]
AT5G43920.1	1.6e-10	32.73	transducin family protein / WD-40 repeat family protein	[more]
AT1G79990.1	1.0e-09	37.50	structural molecules	[more]

BLAST of Carg24885 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SY00\|WDR5B_ARATH	7.8e-55	72.46	COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana OX=3...	[more]
sp\|Q54KL5\|WDR5_DICDI	3.2e-24	60.71	WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum OX=44689 GN=w...	[more]
sp\|Q5M786\|WDR5_XENTR	3.2e-24	62.03	WD repeat-containing protein 5 OS=Xenopus tropicalis OX=8364 GN=wdr5 PE=2 SV=1	[more]
sp\|Q2KIG2\|WDR5_BOVIN	4.6e-23	63.51	WD repeat-containing protein 5 OS=Bos taurus OX=9913 GN=WDR5 PE=2 SV=1	[more]
sp\|P61964\|WDR5_HUMAN	4.6e-23	63.51	WD repeat-containing protein 5 OS=Homo sapiens OX=9606 GN=WDR5 PE=1 SV=1	[more]

BLAST of Carg24885 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K8V6\|A0A0A0K8V6_CUCSA	8.6e-83	98.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G388400 PE=4 SV=1	[more]
tr\|A0A1S3BRB8\|A0A1S3BRB8_CUCME	1.9e-82	97.78	COMPASS-like H3K4 histone methylase component WDR5B OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|A0A1S3UYT6\|A0A1S3UYT6_VIGRR	6.0e-68	71.16	COMPASS-like H3K4 histone methylase component WDR5B OS=Vigna radiata var. radiat...	[more]
tr\|A0A0L9TX13\|A0A0L9TX13_PHAAN	1.3e-67	71.16	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g118600 PE...	[more]
tr\|A0A0S3SRZ3\|A0A0S3SRZ3_PHAAN	1.3e-67	71.16	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036322	WD40_repeat_dom_sf
IPR017986	WD40_repeat_dom
IPR019775	WD40_repeat_CS
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR001680	WD40_repeat
IPR020472	G-protein_beta_WD-40_rep

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24885-RA	Carg24885-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 184..198 score: 38.48 coord: 98..112 score: 38.79 coord: 142..156 score: 37.56
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 288..329 e-value: 8.5E-5 score: 31.9 coord: 30..69 e-value: 1.5E-10 score: 51.0 coord: 72..111 e-value: 3.3E-10 score: 49.9 coord: 116..155 e-value: 3.2E-12 score: 56.6 coord: 243..285 e-value: 0.0014 score: 27.9 coord: 158..197 e-value: 7.7E-13 score: 58.7 coord: 200..240 e-value: 0.019 score: 24.1
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 292..328 e-value: 0.0025 score: 18.5 coord: 244..285 e-value: 1.3E-6 score: 28.9 coord: 117..154 e-value: 3.6E-10 score: 40.1 coord: 33..69 e-value: 1.5E-7 score: 31.9 coord: 77..111 e-value: 1.1E-8 score: 35.5 coord: 159..197 e-value: 4.6E-10 score: 39.8 coord: 203..240 e-value: 0.1 score: 13.4
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 250..294 score: 11.31
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 208..249 score: 9.406
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 37..78 score: 13.817
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 79..114 score: 15.521
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 123..164 score: 18.128
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 165..206 score: 16.858
None	No IPR available	PIRSF	PIRSF002394	GNBP_B	coord: 7..330 e-value: 3.6E-75 score: 250.8
None	No IPR available	PANTHER	PTHR22847	WD40 REPEAT PROTEIN	coord: 17..332
None	No IPR available	PANTHER	PTHR22847:SF602	COMPASS-LIKE H3K4 HISTONE METHYLASE COMPONENT WDR5B	coord: 17..332
None	No IPR available	CDD	cd00200	WD40	coord: 33..328 e-value: 1.33842E-90 score: 274.212
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	G3DSA:2.130.10.10		coord: 19..332 e-value: 1.4E-123 score: 413.6
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 184..198
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 272..286
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 98..112
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 142..156
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 37..332 score: 68.073
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	SSF50978	WD40 repeat-like	coord: 28..328

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24885	Cla014769	Watermelon (97103) v1	carwmB0057
Carg24885	Csa7G388400	Cucumber (Chinese Long) v2	carcuB0057
Carg24885	MELO3C015824	Melon (DHL92) v3.5.1	carmeB0056
Carg24885	ClCG09G007120	Watermelon (Charleston Gray)	carwcgB0058
Carg24885	CSPI07G16280	Wild cucumber (PI 183967)	carcpiB0061
Carg24885	Cucsa.084430	Cucumber (Gy14) v1	carcgyB0063
Carg24885	CmaCh08G003430	Cucurbita maxima (Rimu)	carcmaB0070
Carg24885	CmoCh08G003390	Cucurbita moschata (Rifu)	carcmoB0074
Carg24885	Lsi02G022850	Bottle gourd (USVL1VR-Ls)	carlsiB051
Carg24885	Cp4.1LG17g06450	Cucurbita pepo (Zucchini)	carcpeB0077
Carg24885	CsGy7G014780	Cucumber (Gy14) v2	carcgybB0058
Carg24885	MELO3C015824.2	Melon (DHL92) v3.6.1	carmedB0057
Carg24885	CsaV3_7G028040	Cucumber (Chinese Long) v3	carcucB0063
Carg24885	Cla97C09G169720	Watermelon (97103) v2	carwmbB0055
Carg24885	Bhi09G000899	Wax gourd	carwgoB0065

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24885	Silver-seed gourd	carcarB063
Carg24885	Cucurbita maxima (Rimu)	carcmaB0069
Carg24885	Cucurbita moschata (Rifu)	carcmoB0073
Carg24885	Cucurbita pepo (Zucchini)	carcpeB0076
Carg24885	Wax gourd	carwgoB0064