Cucsa.074530 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.074530
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	U3 small nucleolar RNA-associated protein 14 B isoform 3
Location	scaffold00785 : 357254 .. 360532 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAATAGCATCTCACTCTCACTCACACTCACACCAGATAATCAATAATCCACCATGAATTTCTTCTTCACCACTGAGATTTCAAACCCTTCTTCCTAATACTCCCTTCATTCCCAAATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTCTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCTTCTGCAAACCAAGTGGGCTTCGTTTGAGGTTTTATGGATGGAGATTGTTGTTTCCCGGTGGTGGTTGGGTTGACCAACGGGTTTTTGGAAAGCATGGAGGGTTTAAGGGAAAAAGAGGGCGGCTAATTGTTGCAAGGTTTAACCAGGGTTTTGGGTTTAACGGCGGCGGTGGTGACGGTGGTGACGGTGGTGACGGCGGAGACGACGGGGCAACTGCGAGGCTTGTGGGTAATATTGCTTTGGCTGCTGGCTTAACTTACCTCTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGGTCTGTATTCTTCTTCTTCTTCTCCCTTTCTCTCTCTGCTTCTGCTTTTGTTTCTGGAGTTTAAGATCTGTTTTTTCTCTTTGGAAAACTGGGTGAAATGTACTTGATTTGCTTGTGTTAAGCAGTTTTAGTTTTAGTGATTATTGATGAACATTTGAATGACACTATTCTTTTACTTGCTTTTTTGTTTTAATTTTGCTGGTATTATCAATTCTGCGTTCAACGTAGTCCATTTATCTTATTAAGACAATAAGATCCTCTGCATGTCTCAAAGATGGTGGGTTCATCAATCTTGGATATAAAATTCAATTTTTGTTTTTGGATTGAATATCAAAATCACTTACTTACCTAACAACTTAAACTAATGAAGTGATAATTTAATTATATCAACACTTCAACAATCCCTATAACTAGTTCTTATTCTGTATTTCTTAAACTTTCAAAAGAAACATAGAAATTTTCCTTTTAGTTGTGATGGAAGGGGAAGGGGAGCTTTTCCACCTTACATTAGAGGGCATTTTCTTTGATAGCTGTGGAGAGTAAAATGAGAATGGTTAGCTATTATATTAAATTTATCATTACCTACTAGTTTAAGCTTTTAAGTGAATAGGTGATTTAAGATGATATCAAAATAGGTTGTTTCAGAATGTCGTGGATTCAAGCCTCTACAATATTATTTCTTCCCCAATTAATATTTACTTGCTTGACTATTCTTCATATTTCATGTCTGCAAGTGAATGAAGTATTAGATATTATATTTAATTTATTCTTACCCATTAGCTTGAGCTTTTAAGCTTTTAGATGATTGGTGATTTAAGAACCATAAGTATATATAACATTCTTGCTGAGAGGTTGATTGAGAGAGTGTGGCTCACTTCAATCCCTCCCTTTAGATATATGCTATCGAGTTCTTTTATAAAATTTAGTTTTGTTTTGCATGGAATATCTCCAATCTGAAGTTTAGTTGTGTTTTTGGATGGAATATCTTTGATTTGCTTCCTCTGGCTCAGGCTTTGAAAACTGGTTTCTAGTGGGAGAAAAATGTGTGTATGTAGCTCTCTTTTGTTTGGATTCAAGAACTGGTGGAAGATGAATTCCTTTTTGTTTTAGCTTTTAGAGCCTTGGTTTAATCTGTTAACATATATGGCCATTCAGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGCGATATAGTTCAAAGCAATGTTAGTCTATATTATATCTTTTGCATTTTCAACCTCAAATCTTGAGCCTATATAACTTCTAAATGACATGCTGTCACTTCTTGTCTTGCATTTGCAGTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAGTAAGTGATCTTGAAAGAACTCGTTTGAGGAGATTACTCGATTTTGAAATGATTAGCACACTTCATTTACCATCCATATTGCAGATCAACTCTGAATGAAGAGCTGCAACTGTGCCCTTTTTGTAGCCAACCTTTTTCTGGTAAATACCAAATTTTTATAGATCCCAAGTTCTTATTGTTGTTGGATCGTGAACTGTTAGTTTATCATGGTTTGGTTTGTTTCGTTTTCCTTTTCCTTATATGCAAGAACATCGAATACTGCATAACAACTTCTTATTTATTTGTGTATATTGATTCTTCCTTCACAAATTCAGTGGTGGATGACAAGTTTGTGAGGGACTCAGTGAAGTTCTCCAACAAAACTTCTTCCACCTTTGGACAAGCTTTTAGTGACTTTACTTCTCCAAGAAAAGGTAAGATTCTTCCTGGACTAAATCAATCTTCCCACCCCCCAAAGAAATATTCAACCTACTCGAAACCCAACCACCTCTTGTGATTGATTGAAGGGAAGGAAACTTCTGGTGCAGTTGTTGACATAGAAGCAGAAGTAAAAGATGTGGACTGAACTCGTCTTGGTAAGCGATTGATTTTGTTGTCGACCATAGTCATAAGATACTCGTAAGTATTCAAATAGCATGCTTTTTCTTATGTAATGCTTGTGAACCATGGATTGCAGTTAGTATTCTTCAGAAGCACATCAAATTTAGGGGGACAAGTTCAGTTGGTTCAATTGGGTTTGCCAGATTGAATTAAGTTTTGACACTGGAGATCTTTGTATATTCGTTATATGTTCTTCATGGGTAGGAATTTCCAATTCTGAAACAACTGTAGAAATTTGTGAAATGCCTTCACTTTTGTATATTGATTTTGATACAACAAGTCTAAGGTACAATCTTTACTCTGTAACTAATAAAGACTGATGAACTACAACATAAACTCTTTGCTTATTTAATTCAAACATTGGAAAAGTCACGTTTTTGGATACCTTTTTTATTTTTATATACTTGAGGATATTGTCTCGAAAACCCGAGAAGCTAGTGTCTTCCATCTCCAACTTTCTGCAGGAGAGAACAGAGGCAAGTTAGACCAACAACGTCTAAGCCATTCAAACAATAATATGCAGAGAAAAAGAAAGGTTAGTATTGATCTTTTTAAATCACATTTTCTTCCAACATATTGGAATAAATACTTACTGGCTCTTAAAGTTATTAATCATATCCAGCCAATGTTAGATTTAGACAAAATTGAAGGAATAGAATTTTACTAGACCTAGACATAAATTTAAATGAACATCTAATGGATCAATTTTAGAATGTGTCAAATTTTCAACCAAAGTTAGTTTTCTTAGCTGCTGCTTCTGTAATAGGAGGAGTTCACAGGGCA

mRNA sequence

ATCAATAGCATCTCACTCTCACTCACACTCACACCAGATAATCAATAATCCACCATGAATTTCTTCTTCACCACTGAGATTTCAAACCCTTCTTCCTAATACTCCCTTCATTCCCAAATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTCTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCTTCTGCAAACCAAGTGGGCTTCGTTTGAGGTTTTATGGATGGAGATTGTTGTTTCCCGGTGGTGGTTGGGTTGACCAACGGGTTTTTGGAAAGCATGGAGGGTTTAAGGGAAAAAGAGGGCGGCTAATTGTTGCAAGGTTTAACCAGGGTTTTGGGTTTAAcggcggcggtggtgacggtggtgacggtggtgacggcggagacgacggggcaactgcgAGGCTTGTGGGTAATATTGCTTTGGCTGCTGGCTTAACTTACCTCTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGCGATATAGTTCAAAGCAATTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAATCAACTCTGAATGAAGAGCTGCAACTGTGCCCTTTTTGTAGCCAACCTTTTTCTGTGGTGGATGACAAGTTTGTGAGGGACTCAGTGAAGTTCTCCAACAAAACTTCTTCCACCTTTGGACAAGCTTTTAGTGACTTTACTTCTCCAAGAAAAGGGAAGGAAACTTCTGGTGCAGTTGTTGACATAGAAGCAGAAGTAAAAGATGTGGACTGAACTCGTCTTGTTAGTATTCTTCAGAAGCACATCAAATTTAGGGGGACAAGTTCAGTTGGTTCAATTGGGTTTGCCAGATTGAATTAAGTTTTGACACTGGAGATCTTTGTATATTCGTTATATGTTCTTCATGGGTAGGAATTTCCAATTCTGAAACAACTGTAGAAATTTGTGAAATGCCTTCACTTTTGTATATTGATTTTGATACAACAAGTCTAAGGTACAATCTTTACTCTGTAACTAATAAAGACTGATGAACTACAACATAAACTCTTTGCTTATTTAATTCAAACATTGGAAAAGTCACGTTTTTGGATACCTTTTTTATTTTTATATACTTGAGGATATTGTCTCGAAAACCCGAGAAGCTAGTGTCTTCCATCTCCAACTTTCTGCAGGAGAGAACAGAGGCAAGTTAGACCAACAACGTCTAAGCCATTCAAACAATAATATGCAGAGAAAAAGAAAGGAGGAGTTCACAGGGCA

Coding sequence (CDS)

ATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTCTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCTTCTGCAAACCAAGTGGGCTTCGTTTGAGGTTTTATGGATGGAGATTGTTGTTTCCCGGTGGTGGTTGGGTTGACCAACGGGTTTTTGGAAAGCATGGAGGGTTTAAGGGAAAAAGAGGGCGGCTAATTGTTGCAAGGTTTAACCAGGGTTTTGGGTTTAACGGCGGCGGTGGTGACGGTGGTGACGGTGGTGACGGCGGAGACGACGGGGCAACTGCGAGGCTTGTGGGTAATATTGCTTTGGCTGCTGGCTTAACTTACCTCTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGCGATATAGTTCAAAGCAATTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAATCAACTCTGAATGAAGAGCTGCAACTGTGCCCTTTTTGTAGCCAACCTTTTTCTGTGGTGGATGACAAGTTTGTGAGGGACTCAGTGAAGTTCTCCAACAAAACTTCTTCCACCTTTGGACAAGCTTTTAGTGACTTTACTTCTCCAAGAAAAGGGAAGGAAACTTCTGGTGCAGTTGTTGACATAGAAGCAGAAGTAAAAGATGTGGACTGA

Protein sequence

MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQRVFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD*

Homology

[Close]

BLAST of Cucsa.074530 vs. TrEMBL
Match: A0A0A0L5A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099750 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 3.9e-143
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY
Sbjct: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240
           EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240

Query: 241 EVKDVD 247
           EVKDVD
Sbjct: 241 EVKDVD 246

[Close]

BLAST of Cucsa.074530 vs. TrEMBL
Match: A0A0D2M7L5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G075700 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.7e-74
Identity = 151/249 (60.64%), Postives = 182/249 (73.09%), Query Frame = 1


Query: 6   RFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYG-WRLLFPGGGWVDQRVFGK 65
           +FS F   +  FC KP    P+  P+ V  +P+  +L  +G  R  F   G     +F K
Sbjct: 10  KFSPFTSSNEEFCEKPICCYPVRSPRTVSLRPNRFKLGAFGRQRWSFGEVGRCKDGIFLK 69

Query: 66  HGGFKGK---RGRLIVARFNQGFGFNGGGGDGGDGGDGGD---DGATARLVGNIALAAGL 125
             G+K K   + R+++  F+QGFGFNGGGG  G GG GG    D  TARL+GNIALA GL
Sbjct: 70  EEGWKRKMKRKRRVVLVMFSQGFGFNGGGGGSGGGGGGGGGKIDSNTARLLGNIALAIGL 129

Query: 126 TYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKST 185
           TYLS TGQLGWVLDAIVSIWL+AVLVPIVGV AF+WWAGRDIVQS+CPNCGN+FQIFKS 
Sbjct: 130 TYLSATGQLGWVLDAIVSIWLIAVLVPIVGVGAFLWWAGRDIVQSSCPNCGNDFQIFKSF 189

Query: 186 LNEELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSP-RKGKETSGAVVD 245
           LN+ELQLCP+CSQPFSVVDDKFV++ VKFSN+TS    Q+F+ F+   +KG ++SGAVVD
Sbjct: 190 LNDELQLCPYCSQPFSVVDDKFVKEPVKFSNQTSKQ-KQSFNSFSPGFKKGSDSSGAVVD 249

Query: 246 IEAEVKDVD 247
           IEAEVKD D
Sbjct: 250 IEAEVKDAD 257

[Close]

BLAST of Cucsa.074530 vs. TrEMBL
Match: A0A0B0MR60_GOSAR (Diphthamide biosynthesis 3 OS=Gossypium arboreum GN=F383_10211 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.8e-74
Identity = 152/246 (61.79%), Postives = 181/246 (73.58%), Query Frame = 1


Query: 6   RFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYG-WRLLFPGGGWVDQRVFGK 65
           +FS F   +  FC KP    P+  P+ V  +P+  +L  +G  R  F   G     +F K
Sbjct: 10  KFSPFTSSNEEFCEKPICCYPVRSPRTVSLQPNRFKLGAFGSQRWSFGEVGRCKDGIFLK 69

Query: 66  HGGFKGKRGRLIV-ARFNQGFGFNGGGGDGGDGGDGGD--DGATARLVGNIALAAGLTYL 125
              +K K+ R +V   F+QGFGFNGGGG GG GG GG   D  TARL+GNIALA GLTYL
Sbjct: 70  EERWKRKKKRRVVLVVFSQGFGFNGGGGSGGGGGGGGGKIDSNTARLLGNIALAIGLTYL 129

Query: 126 SVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNE 185
           S TGQLGWVLDAIVSIWL+AVLVPIVGV AF+WWAGRDIVQS+CPNCGN+FQIFKS LNE
Sbjct: 130 SATGQLGWVLDAIVSIWLIAVLVPIVGVGAFLWWAGRDIVQSSCPNCGNDFQIFKSFLNE 189

Query: 186 ELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSP-RKGKETSGAVVDIEA 245
           ELQLCP+CSQPFSVV+DKFV++ VKFSN+TS    Q+F+ F+   +KG ++SGAVVDIEA
Sbjct: 190 ELQLCPYCSQPFSVVNDKFVKEPVKFSNQTSKQ-KQSFNSFSPGFKKGSDSSGAVVDIEA 249

Query: 246 EVKDVD 247
           EVKD D
Sbjct: 250 EVKDAD 254

[Close]

BLAST of Cucsa.074530 vs. TrEMBL
Match: A0A0D2Q8U0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G075700 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.5e-73
Identity = 151/252 (59.92%), Postives = 181/252 (71.83%), Query Frame = 1


Query: 6   RFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYG-WRLLFPGGGWVDQRVFGK 65
           +FS F   +  FC KP    P+  P+ V  +P+  +L  +G  R  F   G     +F K
Sbjct: 10  KFSPFTSSNEEFCEKPICCYPVRSPRTVSLRPNRFKLGAFGRQRWSFGEVGRCKDGIFLK 69

Query: 66  HGGFKGK---RGRLIVARFNQGFGFNGGGGDGGDGGDGGD---DGATARLVGNIALAAGL 125
             G+K K   + R+++  F+QGFGFNGGGG  G GG GG    D  TARL+GNIALA GL
Sbjct: 70  EEGWKRKMKRKRRVVLVMFSQGFGFNGGGGGSGGGGGGGGGKIDSNTARLLGNIALAIGL 129

Query: 126 TYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKST 185
           TYLS TGQLGWVLDAIVSIWL+AVLVPIVGV AF+WWAGRDIVQS+CPNCGN+FQIFKS 
Sbjct: 130 TYLSATGQLGWVLDAIVSIWLIAVLVPIVGVGAFLWWAGRDIVQSSCPNCGNDFQIFKSF 189

Query: 186 LNEELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRK----GKETSGA 245
           LN+ELQLCP+CSQPFSVVDDKFV++ VKFSN+TS    Q+F+ F+   K    G ++SGA
Sbjct: 190 LNDELQLCPYCSQPFSVVDDKFVKEPVKFSNQTSKQ-KQSFNSFSPGFKKVCSGSDSSGA 249

Query: 246 VVDIEAEVKDVD 247
           VVDIEAEVKD D
Sbjct: 250 VVDIEAEVKDAD 260

[Close]

BLAST of Cucsa.074530 vs. TrEMBL
Match: W9QQC8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010182 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 9.4e-73
Identity = 132/180 (73.33%), Postives = 159/180 (88.33%), Query Frame = 1


Query: 67  GFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTYLSVTGQ 126
           G + K+ RL++ RFNQGFGFNGGGG GG G D   DGATAR++GN+ALA GLTYLS+TGQ
Sbjct: 71  GERKKKKRLVLVRFNQGFGFNGGGGGGGGGRD---DGATARVLGNLALAIGLTYLSMTGQ 130

Query: 127 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLC 186
           LGW+LDAIVSIWL+AV++PIVG+ AF+WWAGRDIVQ +CPNCGN+FQI KST+N++LQLC
Sbjct: 131 LGWLLDAIVSIWLLAVIIPIVGLGAFLWWAGRDIVQDSCPNCGNDFQILKSTMNDDLQLC 190

Query: 187 PFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD 246
           PFCSQPFSVVD+KFVRDSVKFSN+ S+TF +AF++F   RKGKETS AVVD+EAE+KD D
Sbjct: 191 PFCSQPFSVVDNKFVRDSVKFSNQ-STTFAEAFNEFARSRKGKETSAAVVDVEAEIKDAD 246

[Close]

BLAST of Cucsa.074530 vs. TAIR10
Match: AT4G27390.1 (AT4G27390.1 unknown protein)

HSP 1 Score: 224.2 bits (570), Expect = 9.0e-59
Identity = 104/150 (69.33%), Postives = 130/150 (86.67%), Query Frame = 1


Query: 98  DGGDDGATARLVGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAG 157
           +GGD+    R++GN+ALA GLTYLS+TGQLGW+LDAIVS+WL+ V+VPI+G+ AF WWA 
Sbjct: 87  NGGDNNGNGRILGNLALAIGLTYLSMTGQLGWILDAIVSVWLIVVIVPILGLGAFFWWAQ 146

Query: 158 RDIVQSNCPNCGNEFQIFKSTLNEELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQ 217
           RDIVQSNCPNCGNEFQIFKS +++E+QLCPFC+QPFSVVDDKFV++ VKFSN+T++ FGQ
Sbjct: 147 RDIVQSNCPNCGNEFQIFKSAMDDEVQLCPFCTQPFSVVDDKFVKEPVKFSNQTTA-FGQ 206

Query: 218 AFSDFTS-PRKGKETSGAVVDIEAEVKDVD 247
             + F+S P+KGK +S AVVDIEAEV D D
Sbjct: 207 DLNGFSSKPKKGKGSSTAVVDIEAEVTDAD 235

[Close]

BLAST of Cucsa.074530 vs. NCBI nr
Match: gi|449463138|ref|XP_004149291.1| (PREDICTED: uncharacterized protein LOC101205846 [Cucumis sativus])

HSP 1 Score: 515.4 bits (1326), Expect = 5.6e-143
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY
Sbjct: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240
           EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240

Query: 241 EVKDVD 247
           EVKDVD
Sbjct: 241 EVKDVD 246

[Close]

BLAST of Cucsa.074530 vs. NCBI nr
Match: gi|659102732|ref|XP_008452285.1| (PREDICTED: uncharacterized protein LOC103493356 [Cucumis melo])

HSP 1 Score: 473.4 bits (1217), Expect = 2.4e-130
Identity = 231/246 (93.90%), Postives = 233/246 (94.72%), Query Frame = 1


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVV C PSGLRLRFYG RL FPGGGWV+QR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           VFGKH GFKGKRGRLIVARFNQGFGFNGGG      GDGGDDGATARL+GNIALAAGLTY
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGG------GDGGDDGATARLLGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240
           EELQLCPFCSQPFSVVDDKFVRDSV FS KTSSTFGQAFSDFTSPRKGKETSGAVVDIEA
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240

Query: 241 EVKDVD 247
           EVKDVD
Sbjct: 241 EVKDVD 240

[Close]

BLAST of Cucsa.074530 vs. NCBI nr
Match: gi|1009110581|ref|XP_015896337.1| (PREDICTED: uncharacterized protein LOC107430062 [Ziziphus jujuba])

HSP 1 Score: 304.7 bits (779), Expect = 1.5e-79
Identity = 158/244 (64.75%), Postives = 187/244 (76.64%), Query Frame = 1


Query: 5   IRFSTFNI--LHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQRVF 64
           I FS   +  LH++   K  K N LP  KV     +  R+R    R  F G    +  + 
Sbjct: 9   INFSACQLRTLHDDIFKKSIKLNLLPRRKVGAFHHNRFRVRGCRERWSFSGAVSREGGIL 68

Query: 65  GKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTYLS 124
            K   +KGK+G ++V RFNQGFGFNGGGG GG GG G D+GATARL+GNIA A GLTYLS
Sbjct: 69  VKGEKWKGKKGSVLV-RFNQGFGFNGGGGSGGGGGGGSDNGATARLLGNIAFAIGLTYLS 128

Query: 125 VTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEE 184
           VTGQLGW+LDAIVSIWL AV+VPIVG+ AF+WWAGRDIVQ +CPNCGN+FQIFKSTLN++
Sbjct: 129 VTGQLGWLLDAIVSIWLFAVIVPIVGLGAFLWWAGRDIVQDSCPNCGNDFQIFKSTLNDD 188

Query: 185 LQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEV 244
           LQLCPFCSQPFSVVD+KFVRDSVKFSN+ S+TFGQAF+DF S RK K++S +VVD+EAEV
Sbjct: 189 LQLCPFCSQPFSVVDNKFVRDSVKFSNQ-STTFGQAFNDFYSSRKDKDSSKSVVDVEAEV 248

Query: 245 KDVD 247
           KD D
Sbjct: 249 KDAD 250

[Close]

BLAST of Cucsa.074530 vs. NCBI nr
Match: gi|694412575|ref|XP_009334598.1| (PREDICTED: uncharacterized protein LOC103927402 [Pyrus x bretschneideri])

HSP 1 Score: 295.0 bits (754), Expect = 1.2e-76
Identity = 152/237 (64.14%), Postives = 179/237 (75.53%), Query Frame = 1


Query: 13  LHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWR--LLFPGGGWVDQRVFGKHGGFKG 72
           LHN  C KP K+ PL   K+ F K S  RL+ Y  R  +L    GW  ++          
Sbjct: 19  LHNRTCKKPIKYFPLSRAKIGFLKQSKFRLQAYWDRDGILVTDEGWKRKK---------- 78

Query: 73  KRGRLIVARFNQGFG-FNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTYLSVTGQLGW 132
           K+ R +V R NQGFG FNGGGG GG GG   DDGA ARL+GN+A+A GLTYLS TGQLGW
Sbjct: 79  KKKREVVVRLNQGFGGFNGGGGGGGGGGK--DDGAIARLLGNLAVAIGLTYLSFTGQLGW 138

Query: 133 VLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLCPFC 192
           +LDAIVSIWL+AVLVPIVGV AF+WWAGRD+VQ +CPNCGN+FQIFKSTLN++LQLCP+C
Sbjct: 139 LLDAIVSIWLIAVLVPIVGVGAFLWWAGRDMVQDSCPNCGNDFQIFKSTLNDDLQLCPYC 198

Query: 193 SQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD 247
           SQPFSVVDDKFV D +KFS K S+TFGQAF+DFT   +GK++S AVVDIEA+VKD D
Sbjct: 199 SQPFSVVDDKFVMDPIKFS-KQSTTFGQAFNDFTRSARGKDSSTAVVDIEADVKDAD 242

[Close]

BLAST of Cucsa.074530 vs. NCBI nr
Match: gi|657954170|ref|XP_008366468.1| (PREDICTED: uncharacterized protein LOC103430110 [Malus domestica])

HSP 1 Score: 294.7 bits (753), Expect = 1.5e-76
Identity = 152/237 (64.14%), Postives = 178/237 (75.11%), Query Frame = 1


Query: 13  LHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWR--LLFPGGGWVDQRVFGKHGGFKG 72
           LHN  C KP K+ PL    + F K S  RL+ Y  R  +L    GW  ++          
Sbjct: 19  LHNRTCKKPIKYFPLSRANIGFLKQSKFRLQAYWDRDGILVTDEGWKRKK---------- 78

Query: 73  KRGRLIVARFNQGFG-FNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTYLSVTGQLGW 132
           K+ R +V R NQGFG FNGGGG GG GG   DDGATARL+GN+A+A GLTYLS TGQLGW
Sbjct: 79  KKKREVVVRLNQGFGGFNGGGGGGGGGGK--DDGATARLLGNLAVAIGLTYLSFTGQLGW 138

Query: 133 VLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLCPFC 192
           +LDAIVSIWL+AVLVPIVGV AF+WWAGRD+VQ +CPNCGN+FQIFKSTLN++LQLCP+C
Sbjct: 139 LLDAIVSIWLIAVLVPIVGVGAFLWWAGRDMVQDSCPNCGNDFQIFKSTLNDDLQLCPYC 198

Query: 193 SQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD 247
           SQPFSVVDDKFV D +KFS K S+TFGQAF+DFT   +GK +S AVVDIEA+VKD D
Sbjct: 199 SQPFSVVDDKFVMDPIKFS-KQSTTFGQAFNDFTRSTRGKHSSTAVVDIEADVKDAD 242

The following BLAST results are available for this feature:

BLAST of Cucsa.074530 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5A4_CUCSA	3.9e-143	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099750 PE=4 SV=1	[more]
A0A0D2M7L5_GOSRA	1.7e-74	60.64	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G075700 PE=4 SV=1	[more]
A0A0B0MR60_GOSAR	3.8e-74	61.79	Diphthamide biosynthesis 3 OS=Gossypium arboreum GN=F383_10211 PE=4 SV=1	[more]
A0A0D2Q8U0_GOSRA	1.5e-73	59.92	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G075700 PE=4 SV=1	[more]
W9QQC8_9ROSA	9.4e-73	73.33	Uncharacterized protein OS=Morus notabilis GN=L484_010182 PE=4 SV=1	[more]

BLAST of Cucsa.074530 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G27390.1	9.0e-59	69.33	unknown protein	[more]

BLAST of Cucsa.074530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463138\|ref\|XP_004149291.1\|	5.6e-143	100.00	PREDICTED: uncharacterized protein LOC101205846 [Cucumis sativus]	[more]
gi\|659102732\|ref\|XP_008452285.1\|	2.4e-130	93.90	PREDICTED: uncharacterized protein LOC103493356 [Cucumis melo]	[more]
gi\|1009110581\|ref\|XP_015896337.1\|	1.5e-79	64.75	PREDICTED: uncharacterized protein LOC107430062 [Ziziphus jujuba]	[more]
gi\|694412575\|ref\|XP_009334598.1\|	1.2e-76	64.14	PREDICTED: uncharacterized protein LOC103927402 [Pyrus x bretschneideri]	[more]
gi\|657954170\|ref\|XP_008366468.1\|	1.5e-76	64.14	PREDICTED: uncharacterized protein LOC103430110 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.074530.2	Cucsa.074530.2	mRNA
Cucsa.074530.1	Cucsa.074530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36785	FAMILY NOT NAMED	coord: 1..246 score: 1.9E
None	No IPR available	PANTHER	PTHR36785:SF1	SUBFAMILY NOT NAMED	coord: 1..246 score: 1.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.074530	Cla011754	Watermelon (97103) v1	cgywmB077
Cucsa.074530	Csa3G099750	Cucumber (Chinese Long) v2	cgycuB071
Cucsa.074530	MELO3C016549	Melon (DHL92) v3.5.1	cgymeB076
Cucsa.074530	ClCG10G006570	Watermelon (Charleston Gray)	cgywcgB074
Cucsa.074530	CSPI03G05920	Wild cucumber (PI 183967)	cgycpiB072
Cucsa.074530	CmaCh16G008020	Cucurbita maxima (Rimu)	cgycmaB0121
Cucsa.074530	CmaCh04G009140	Cucurbita maxima (Rimu)	cgycmaB0122
Cucsa.074530	CmoCh04G009820	Cucurbita moschata (Rifu)	cgycmoB0118
Cucsa.074530	CmoCh16G008590	Cucurbita moschata (Rifu)	cgycmoB0117
Cucsa.074530	Lsi05G006930	Bottle gourd (USVL1VR-Ls)	cgylsiB074
Cucsa.074530	Cp4.1LG14g00200	Cucurbita pepo (Zucchini)	cgycpeB0118
Cucsa.074530	MELO3C016549.2	Melon (DHL92) v3.6.1	cgymedB075
Cucsa.074530	CsaV3_3G006020	Cucumber (Chinese Long) v3	cgycucB074
Cucsa.074530	Cla97C10G190510	Watermelon (97103) v2	cgywmbB070
Cucsa.074530	Bhi11G000594	Wax gourd	cgywgoB080
Cucsa.074530	Carg24070	Silver-seed gourd	carcgyB0262

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.074530	Wild cucumber (PI 183967)	cgycpiB071
Cucsa.074530	Cucumber (Chinese Long) v2	cgycuB070
Cucsa.074530	Watermelon (Charleston Gray)	cgywcgB075
Cucsa.074530	Watermelon (97103) v1	cgywmB076
Cucsa.074530	Cucurbita pepo (Zucchini)	cgycpeB0119
Cucsa.074530	Silver-seed gourd	carcgyB0740
Cucsa.074530	Cucumber (Chinese Long) v3	cgycucB073
Cucsa.074530	Watermelon (97103) v2	cgywmbB071
Cucsa.074530	Cucumber (Gy14) v1	cgycgyB023