Cucsa.049930 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.049930
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	RING/U-box superfamily protein
Location	scaffold00551 : 75605 .. 79131 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTCCGCCACTATTACCGCCACCGCCGCCGCCGAACGCCACACCTACTGGTGCCACGAGTGCGATATGAGCGTCACTTTGGTTTCCCCTTCTTCTTCATCATCGTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTCTTGTTTGCCCCCACTGCCTCACTGACTTCATCGAACACATGGATTTCACCATACCCACTTCCTCTTCTTCCATTTCCGACAACCCCAATTCCTCTTCTCCCCCCACAGATTCCGATCCATCATCCTTCGTCTTTGTCGACCCACTTCCGATCACTTCCGATGACAATTACCTCCTTAATAGCCCTCAGTTCCTCCGTCTTTTCCAGCACCTTGCAGATTCATCCGAGTCTGATTTCGTCCCATCTGTCCCTTTCAACCCATTTACTCCGATCAAGGCCTCTGTCATGGCGATTCCCACTATTAAAGTCACCTCCGCCTTGCTCGATGAAGACCCAGTTTTAATTTGTGCTATCTGTAAGGATCAGTTCCTTCTTGAGGTTGAAGCCAAACAGCTCCCTTGTTCTCATCTTTATCATCCAGATTGCATTCTTCCTTGGCTTTCTAATCATGATTCTTGTCCGCTTTGCCGTTTTAAGCTTCCTTCTGATGACCCCTCGGATCGTGTGAGATGTAGGACTAGTGCCTTGTTGAGGGCTAGAGATCTGATGCATCAAGAAGATAGTTATGGGTTGAGGACTACTTTGGAACTCATGGCTAGAAGGCATAGTTCTATTTCTAGTGAGGGAATTCATGTGGATTCGTTTCAATCACCCACTCAGTTTGGGGTTGCTATGATGGAGAGTGGGGAACAGACCGACAGTGTTGAAACTGTTTCTAGTGTGGCTACTGATGATGGGATTGTAATTGTCAATAGCAATGGTGATGAAAATGGGTTTTTGGGAATGGATGGACCTATAACTGAGGATGCTGGGACTGTAGTTCAGGATATTGGAGTTTCTCCTTCGAGTTTTGTTTCTGCATAAATTGAGGTTTGTGTTCTCCTCTCTTTTGACTTTTGTTTTtATTAGTTTTCCATGTTCTTGTAGTTTGTGTTGAGAAGATGGATTTCTACACCGAGCTTGGAAATGATAAATGAAGGAGTTTATATTTGATCTAAATTGACAAGTAATAACAAATAGAGTGCCAATGACTGAGTTGAGTTCTTAGAGCTTAGGAACTCATTGATTGGGCAGTTTTGATAGTCTTTTCAGGATTTATGATGGTTGTGTTTTTtACTTGAAACATCCATCTAGAGCATACCGCTCTTAGATAAAGATGGAAGCTTGATCCAAGCTTTCTGCTTTTATTtCCTACTGATGGCTCTTCGAATGGTTCTGTGGTGATAATGCAAAAAGACTAAAAaTGAATTCAACAGGGCCTGTTATAAACATTTCAAGAATTCTTAGAAATCTAGTTTAAAACTCCCATAGAAAAGACCATTGAACTTTAACTTTGTATAACCTTCCTGGTTTTGAACTATAAACCATACGTCCATACCATTACCAATGGTTGGTGCATGTATACGACTATCATCTCATCGCAAACTTGGTTTCCCATGCTTTTGCTGCCTTCTTTCTATTTGATGATCGTTGGCTTATGTGCACTATCGTAAGATGGTTCTGGCCTATCTTTAAACTTTAAGTAACCTGCAAGAATCATGAAGCTGAGCGAAAGTCTTGAAATTGGTTCGGCATTTTGTTTTGGAATTTGCATGTATGAAGTATCGACTGATGTAAAAGGTCTTAGGAAAGTTGGTTCATTATCGTTGGTATGAGACCATAATGTTATAGGTTTTGTAGATTGACTTATATTGTAAGTCCATAATGTCCCTATAGTCCATTAACAAATCCCATTTTCATCGCCAGATATGTTCTCCCAGTAAATGTTTACAATATTTAATGCATGAGATTTTGTTTGACTTAATGGCTCAGTAGGTCATGTTTCGTTGGACTGGGAAAATAATAAAAGCTAGTTACGTATGGTTCTTAGGATACGGCACCACGCAGAAGAGGAAGGGTTAGACGAGGTTGGCTTATTAGAGGAAAAGTTTAAGTTGCAGGACCCTCTAGTGCTGTAAGATCCTCCACTGCCACAAGACCCTCTCATGTCATAAATGCAAGGGAACGTTGCAGGAGGTCAAACTTAGGATGCGCCAGTGGCTTCATAGTAGCAAGCCCCATCCAACATCGAAAGTGATTTTGTTGCATTGGCAGCACAAGTAGAGGCAATCGTTACAACTATGATGGTGAGAATGCACAGTAGATGGTTGGAACAGCTGTGGCTGATCAGGTAGCCAGCAGATTCAAGTCTAGGTTTAGGACCAACAAGATTGATCGCTTGAAGCCAAGTACTTGCGGGACTTTAGGAAGTATAATCCTCACACATTTGATGGATCATCAAAGGACCCCATGAAGGCAGAATTTTGCTTGTCCTTAATTGAGACTATTTTTCGTTTTCTAAAGTGCCCTGATGATAGAAGCTTTAGTGTTCAGTATTTGTGCTTACAAACAGTGATGAGATCTGGTGGCAGTTCGCAGAAAGATGAATTGATACCAAAGCAGGACCTATGACTTGAGAACGATTTAAGGAATGTTTTTATGAGCAGTATTTCTCCGCCAATACAAGGTATGATAAGCAGGCTGAAGAAGAGGATAAGCTTGGCTGCCATATCATAGCAACCATATGCAACTGGCTTCTATTAGATTCTCAGTCAAGTAAAACATGACCTAGTAAGACATTAAGTTTTGCAAAATCTAATTCATTAAATACTATAAACATTTACTAGGAAGACATACCTGGCGATGACAAGGAATATGTTAATGGGCCGTAAGGACACTCACGACTCTAGGCTTACAATGCAAGTTAGTCTACAGAACTTATAATCTTATGCTCTTGTACCACCCTAATGATTCGTCTTTCCTAAAACTTTAACATGAGTCATTACTTCATGCCTGCAAATTTCCAACGCTTAGACCAATTGAAAGGAAGATGGGAGTTCTTTCTAGCATTGCACAATTTCTTTCATGTTTTTATGCAACTTCCGAGTCCTTGTGAACTGCAAAAGTGAGATTTATGCTTCTGTGTTCTCTAAAACAACCTTGAATAGGACAAAGCTTATATGAACACGATCTGTTATGGCCTTGAGTTCTAAAAAGGCACCTTAAACATGAAGAAACCCCATCACCCAACTTATTTGTGATGTGCTGTATACATATTTTACTAAGTTGTATCATATGCTAGCAATGCTTAATGATTTTACTTGTATTGGAGGAATCTTAATGTTTACATGTTTCCTTAAAGCAAGGATTCATCTAGTTAATATTAACTTACTTTTACTGTCATTTATTTTGTTAATGCAGGTAATATAGTAGAATATATGGTTGTTAGATGAATCTTAGAAAGCAGCTACCCCAAGTAGATGATTGATTGGAAGTGTAAATTGCTACAGAGAAAGACTCTGCTATCTTCTTCTTATTCTTCTCCTTCTTCATCTTCGGTAACCATGTCT

mRNA sequence

ATGTCCTCCGCCACTATTACCGCCACCGCCGCCGCCGAACGCCACACCTACTGGTGCCACGAGTGCGATATGAGCGTCACTTTGGTttccccttcttcttcatcatcgtcttcttcttcttcttcttcctcttcctctCTTGTTTGCCCCCACTGCCTCACTGACTTCATCGAACACATGGATTTCACCATACCCACTTCCTCTTCTTCCATTTCCGACAACCCCAATTCCTCTTCTCCCCCCACAGATTCCGATCCATCATCCTTCGTCTTTGTCGACCCACTTCCGATCACTTCCGATGACAATTACCTCCTTAATAGCCCTCAGTTCCTCCGTCTTTTCCAGCACCTTGCAGATTCATCCGAGTCTGATTTCGTCCCATCTGTCCCTTTCAACCCATTTACTCCGATCAAGGCCTCTGTCATGGCGATTCCCACTATTAAAGTCACCTCCGCCTTGCTCGATGAAGACCCAGTTTTAATTTGTGCTATCTGTAAGGATCAGTTCCTTCTTGAGGTTGAAGCCAAACAGCTCCCTTGTTCTCATCTTTATCATCCAGATTGCATTCTTCCTTGGCTTTCTAATCATGATTCTTGTCCGCTTTGCCGTTTTAAGCTTCCTTCTGATGACCCCTCGGATCGTGTGAGATGTAGGACTAGTGCCTTGTTGAGGGCTAGAGATCTGATGCATCAAGAAGATAGTTATGGGTTGAGGACTACTTTGGAACTCATGGCTAGAAGGCATAGTTCTATTTCTAGTGAGGGAATTCATGTGGATTCGTTTCAATCACCCACTCAGTTTGGGGTTGCTATGATGGAGAGTGGGGAACAGACCGACAGTGTTGAAACTGTTTCTAGTGTGGCTACTGATGATGGGATTGTAATTGTCAATAGCAATGGTGATGAAAATGGGTTTTTGGGAATGGATGGACCTATAACTGAGGATGCTGGGACTGTAGTTCAGGATATTGGAGTTTCTCCTTCGAGTTTTGTTTCTGCATAAATTGAGGTAATATAGTAGAATATATGGTTGTTAGATGAATCTTAGAAAGCAGCTACCCCAAGTAGATGATTGATTGGAAGTGTAAATTGCTACAGAGAAAGACTCTGCTAtcttcttcttattcttctccttcttcatcttcGGTAACCATGTCT

Coding sequence (CDS)

ATGTCCTCCGCCACTATTACCGCCACCGCCGCCGCCGAACGCCACACCTACTGGTGCCACGAGTGCGATATGAGCGTCACTTTGGTTTCCCCTTCTTCTTCATCATCGTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTCTTGTTTGCCCCCACTGCCTCACTGACTTCATCGAACACATGGATTTCACCATACCCACTTCCTCTTCTTCCATTTCCGACAACCCCAATTCCTCTTCTCCCCCCACAGATTCCGATCCATCATCCTTCGTCTTTGTCGACCCACTTCCGATCACTTCCGATGACAATTACCTCCTTAATAGCCCTCAGTTCCTCCGTCTTTTCCAGCACCTTGCAGATTCATCCGAGTCTGATTTCGTCCCATCTGTCCCTTTCAACCCATTTACTCCGATCAAGGCCTCTGTCATGGCGATTCCCACTATTAAAGTCACCTCCGCCTTGCTCGATGAAGACCCAGTTTTAATTTGTGCTATCTGTAAGGATCAGTTCCTTCTTGAGGTTGAAGCCAAACAGCTCCCTTGTTCTCATCTTTATCATCCAGATTGCATTCTTCCTTGGCTTTCTAATCATGATTCTTGTCCGCTTTGCCGTTTTAAGCTTCCTTCTGATGACCCCTCGGATCGTGTGAGATGTAGGACTAGTGCCTTGTTGAGGGCTAGAGATCTGATGCATCAAGAAGATAGTTATGGGTTGAGGACTACTTTGGAACTCATGGCTAGAAGGCATAGTTCTATTTCTAGTGAGGGAATTCATGTGGATTCGTTTCAATCACCCACTCAGTTTGGGGTTGCTATGATGGAGAGTGGGGAACAGACCGACAGTGTTGAAACTGTTTCTAGTGTGGCTACTGATGATGGGATTGTAATTGTCAATAGCAATGGTGATGAAAATGGGTTTTTGGGAATGGATGGACCTATAACTGAGGATGCTGGGACTGTAGTTCAGGATATTGGAGTTTCTCCTTCGAGTTTTGTTTCTGCATAA

Protein sequence

MSSATITATAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEHMDFTIPTSSSSISDNPNSSSPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLADSSESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTSALLRARDLMHQEDSYGLRTTLELMARRHSSISSEGIHVDSFQSPTQFGVAMMESGEQTDSVETVSSVATDDGIVIVNSNGDENGFLGMDGPITEDAGTVVQDIGVSPSSFVSA*

Homology

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BLAST of Cucsa.049930 vs. Swiss-Prot
Match: RHC2A_ARATH (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana GN=RHC2A PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.2e-18
Identity = 67/215 (31.16%), Postives = 112/215 (52.09%), Query Frame = 1


Query: 31  PSSSSSSSSSSSSSSSLVCPHCLT---------DFIEHMDFTIPTSSSSISDNPNSSSPP 90
           PSSSSS+ S+S  + +   P  +T           I         SS  +S+  + S+  
Sbjct: 63  PSSSSSTPSASMHADNSPTPTIVTRTRSNRSPNPVIVLRGSAAAPSSDVVSEGLDRSAFQ 122

Query: 91  TDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLA--DSSESDFVPSVPFNPFTPIKA 150
              D  +   + PLP  S   +LL S  F RL   ++  + + +  + S    P +  K+
Sbjct: 123 MYYDDGTDSGLRPLP-PSMTEFLLGSG-FDRLLDQISQIELNTNRNLRSCEHPPAS--KS 182

Query: 151 SVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPCSHLYHPDCILPWLSNHDSC 210
           ++ A+P I++    L  D    CA+CK+ F+L+  A+++PC+H+YHPDCILPWL+  +SC
Sbjct: 183 AIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSC 242

Query: 211 PLCRFKLPSDDPSDRVRCRTSALLRARDLMHQEDS 235
           P+CR +LP++D +D      +A+    +   +EDS
Sbjct: 243 PVCRHELPAEDLTDGTGAALTAVTATAE--EEEDS 271

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BLAST of Cucsa.049930 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.4e-18
Identity = 69/200 (34.50%), Postives = 103/200 (51.50%), Query Frame = 1


Query: 28  LVSPSSSSSSSSSSSS----SSSLVCP--HCLTDFIEHMDFT-IPTSSSSISDNPNSSSP 87
           L+ PSSSS+++SSS+S    + SL  P      D      FT I    + +  +      
Sbjct: 94  LLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFTFIQNHLNDLRSSGAQIEF 153

Query: 88  PTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLADSSESDFVPSVPFNPFTP--IK 147
              ++PS   F   LP    D ++   P   +L Q LA++  + +         TP   K
Sbjct: 154 VIQNNPSDQGF--RLPANIGDYFI--GPGLEQLIQQLAENDPNRYG--------TPPASK 213

Query: 148 ASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPCSHLYHPDCILPWLSNHDS 207
           +++ A+P + +T + L+ +    CA+C D F    EAKQ+PC HLYH DC+LPWL  H+S
Sbjct: 214 SAIEALPLVNITKSNLNSE-FNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNS 273

Query: 208 CPLCRFKLPSDDPSDRVRCR 219
           CP+CR +LP+DDP    R R
Sbjct: 274 CPVCRHELPTDDPDYERRVR 280

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BLAST of Cucsa.049930 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.5e-18
Identity = 39/83 (46.99%), Postives = 59/83 (71.08%), Query Frame = 1


Query: 138 KASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPCSHLYHPDCILPWLSNHD 197
           K+++ A+PT+KVT  +L  + +  CA+C D+F    + KQ+PC H++H DC+LPWL  H+
Sbjct: 193 KSAIDALPTVKVTKDMLKSE-MNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHN 252

Query: 198 SCPLCRFKLPSDDPSDRVRCRTS 221
           SCP+CRF+LP+DDP    R + S
Sbjct: 253 SCPVCRFELPTDDPDYENRSQGS 274

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BLAST of Cucsa.049930 vs. Swiss-Prot
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 4.1e-16
Identity = 44/113 (38.94%), Postives = 64/113 (56.64%), Query Frame = 1


Query: 108 PQFLRLFQHLADSSESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKD 167
           P    LF+ L+  +     P  P       ++++ A+PTIK+    L       C +CKD
Sbjct: 144 PGLEELFEQLSAGTTRRGPPPAP-------RSAIDALPTIKIAQRHLRSSDSN-CPVCKD 203

Query: 168 QFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTS 221
           +F L  EAKQ+PC+H+YH DCI+PWL  H+SCP+CR +LPS       + RT+
Sbjct: 204 EFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASGPSSSQNRTT 248

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BLAST of Cucsa.049930 vs. Swiss-Prot
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 6.0e-15
Identity = 33/73 (45.21%), Postives = 53/73 (72.60%), Query Frame = 1


Query: 138 KASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPCSHLYHPDCILPWLSNHD 197
           K+++ A+ T +V+S+  + + V++CA+CKD  ++    K+LPC H YH DCI+PWL   +
Sbjct: 235 KSAIEALETFEVSSS--EGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRN 294

Query: 198 SCPLCRFKLPSDD 211
           SCP+CRF+L +DD
Sbjct: 295 SCPVCRFQLETDD 305

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BLAST of Cucsa.049930 vs. TrEMBL
Match: A0A0A0KBK3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429620 PE=4 SV=1)

HSP 1 Score: 671.4 bits (1731), Expect = 5.7e-190
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 1


Query: 1   MSSATITATAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEHM 60
           MSSATITATAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEHM
Sbjct: 1   MSSATITATAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEHM 60

Query: 61  DFTIPTSSSSISDNPNSSSPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLADS 120
           DFTIPTSSSSISDNPNSSSPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLADS
Sbjct: 61  DFTIPTSSSSISDNPNSSSPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLADS 120

Query: 121 SESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPC 180
           SESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPC
Sbjct: 121 SESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPC 180

Query: 181 SHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTSALLRARDLMHQEDSYGLRTT 240
           SHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTSALLRARDLMHQEDSYGLRTT
Sbjct: 181 SHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTSALLRARDLMHQEDSYGLRTT 240

Query: 241 LELMARRHSSISSEGIHVDSFQSPTQFGVAMMESGEQTDSVETVSSVATDDGIVIVNSNG 300
           LELMARRHSSISSEGIHVDSFQSPTQFGVAMMESGEQTDSVETVSSVATDDGIVIVNSNG
Sbjct: 241 LELMARRHSSISSEGIHVDSFQSPTQFGVAMMESGEQTDSVETVSSVATDDGIVIVNSNG 300

Query: 301 DENGFLGMDGPITEDAGTVVQDIGVSPSSFVSA 334
           DENGFLGMDGPITEDAGTVVQDIGVSPSSFVSA
Sbjct: 301 DENGFLGMDGPITEDAGTVVQDIGVSPSSFVSA 333

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BLAST of Cucsa.049930 vs. TrEMBL
Match: A0A103Y170_CYNCS (Zinc finger, RING/FYVE/PHD-type OS=Cynara cardunculus var. scolymus GN=Ccrd_021127 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.0e-53
Identity = 136/335 (40.60%), Postives = 199/335 (59.40%), Query Frame = 1


Query: 2   SSATITATA--AAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEH 61
           ++AT+TA +  + +RHTYWCHECDMS++L+           SS+++SL+CPHC +DF+E 
Sbjct: 16  AAATVTAASNTSMDRHTYWCHECDMSISLIP----------SSTTASLLCPHCNSDFLEE 75

Query: 62  MDFTIP-TSSSSISDNPNSSSPPTDSDPSSFV--------FVDP-LPIT----------- 121
           +D  I   ++S++++NPN    P D D S+ V        F+DP LP             
Sbjct: 76  LDSPITFNNTSNVNNNPN----PDDHDDSNHVSSQLLFPSFLDPSLPAADYPTTFQFPPV 135

Query: 122 --SDDNYLLNSPQFLRLFQHLADSSESD-FVPSVPFNPFTPI-KASVMAIPTIKVTSALL 181
             SDDN+LL+SP F R+  HL +S +S     +      +P  K+++ AIP++K+TSA L
Sbjct: 136 APSDDNFLLDSPYFHRVIHHLFNSEDSSPSTTATTSRHHSPASKSAIEAIPSVKITSAFL 195

Query: 182 DEDPVLICAICKDQFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPSD--DPS 241
           + DP++ICA+CKDQF+++ E K+LPC H+YHPDCILPWLS H+SCP+CRF+LP++  D  
Sbjct: 196 EIDPIVICAVCKDQFVIDDETKELPCKHMYHPDCILPWLSQHNSCPVCRFQLPTEAVDGD 255

Query: 242 DRVRCRT-SALLRARDLMHQED-----SYGLRTTLELMARRHSSI-----------SSEG 287
            +VR R+ S +LR  DL+  ED      +GLR     +ARRH  +             E 
Sbjct: 256 LKVRRRSRSRVLRLGDLIDDEDDEELLGFGLRH----LARRHRLVFPMRHHHYRHPQVEE 315

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BLAST of Cucsa.049930 vs. TrEMBL
Match: F6HPS6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0156g00140 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.9e-53
Identity = 139/345 (40.29%), Postives = 184/345 (53.33%), Query Frame = 1


Query: 5   TITATAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEHMDFTI 64
           T TA  A +R TYWCHECDMSVTL         S SSSSS +L+CPHC +DF+E MD   
Sbjct: 11  TPTAATAIDRRTYWCHECDMSVTL---------SPSSSSSPTLLCPHCHSDFLEEMD--- 70

Query: 65  PTSSSSISDNPNSSSPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLADSSE-- 124
                  S NPN +  PT     +F F         +N+LL+SP   RL  HL   S+  
Sbjct: 71  -------SPNPNPNPNPT---APNFSF-------HSENFLLDSPYLHRLIHHLTHPSDTN 130

Query: 125 ------SDFVPSVPFNP--FTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVE 184
                 SD  P    NP      +AS+ A+PT K+T + L  DP+L CA+CKDQF+++VE
Sbjct: 131 NDGNDSSDLPPPRYLNPNSVAASRASLEALPTFKITPSFLQLDPILFCAVCKDQFVVDVE 190

Query: 185 AKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTSALLRARDLMHQEDS 244
           AK+LPC+H+YH DCILPWLS  +SCPLCRF+LP+D+  D      +  +   DLM   + 
Sbjct: 191 AKRLPCNHIYHSDCILPWLSQQNSCPLCRFRLPTDEGEDSGDAGATVTMTFGDLMEDHEL 250

Query: 245 YGLRTTLELMARRH----SSISSEGIHVDSFQSPTQFGVAMMESGEQTDSVETVSSVATD 304
           +GL +TL  +ARR+     ++S+EG              A  ES    +SVETVSS    
Sbjct: 251 FGLGSTLRHIARRNRLVFPALSAEG-----------QAQAQGESLGPDNSVETVSSWPRQ 310

Query: 305 DGIVIVNSNGDENG--FLGMDGPITEDAGTVVQDIGVSPSSFVSA 334
              V+V   G   G    G      EDA  ++ ++ VS S   S+
Sbjct: 311 ---VLVGGGGGGGGDADFGAGAVANEDADAMMPEVRVSGSVSASS 312

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BLAST of Cucsa.049930 vs. TrEMBL
Match: A0A0V0HZ86_SOLCH (Putative E3 ubiquitin-protein ligase RING1-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.1e-50
Identity = 117/291 (40.21%), Postives = 171/291 (58.76%), Query Frame = 1


Query: 4   ATITATAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEHMDFT 63
           +T  AT     HT+WCHECDMSV L+ P+ ++             CPHC +DF+EHMD  
Sbjct: 2   STTIATPPQRHHTFWCHECDMSVFLLHPTPNNPR-----------CPHCHSDFLEHMDSI 61

Query: 64  IPTSSSSISDNPNSSSPPTDSD-PSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLADSSE 123
            PT      ++PN   P +D + P++F         SDDN+LLNSP   RL +HL  +++
Sbjct: 62  TPTILPQFPNHPN---PTSDIETPTTFT-------PSDDNFLLNSPYLHRLIRHLTTTND 121

Query: 124 SDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPCSH 183
           +   P+   +  +  +++V A+  +++TS++L+ DP + CA+CKDQFLL+++ K LPC H
Sbjct: 122 A---PTPNPHNNSASRSAVAALELLQITSSMLENDPDIPCAVCKDQFLLDMQVKMLPCKH 181

Query: 184 LYHPDCILPWLSNHDSCPLCRFKLPS-DDPSDRVRCRTSALLRARDLM-HQEDSYGLRTT 243
           +YH DCILPWL  ++SCP+CRF+LP+ +D   R R    A +R  + +  QED +G R T
Sbjct: 182 MYHSDCILPWLEMNNSCPVCRFQLPTEEDEVCRRRQNFVAAMRLEEFLGEQEDLFGFRRT 241

Query: 244 LELMARRHSSISSEGIHVDSFQ---SPTQFGVAMMESG--EQTDSVETVSS 287
           L  +ARRH     +    DS +   SPTQ G      G   + +SVETVSS
Sbjct: 242 LRRVARRHHLDREDTTRGDSLEFLLSPTQIGQTGQGDGVVARANSVETVSS 268

[Close]

BLAST of Cucsa.049930 vs. TrEMBL
Match: A0A087GZB2_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA5G255300 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.0e-49
Identity = 111/262 (42.37%), Postives = 162/262 (61.83%), Query Frame = 1


Query: 2   SSATITATAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEHMD 61
           SS T+T T   +R TYWCHECDMS++L+        SSSSSSSS L+CP C  DF+E MD
Sbjct: 4   SSTTVTTTVEPDRRTYWCHECDMSLSLLP-------SSSSSSSSPLLCPQCGIDFLERMD 63

Query: 62  FTIPTSSSSISDNPNSSSPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHL-ADS 121
               +SS+             D+D   + FVDP  + SDDN+LL+SP   RL +HL +D+
Sbjct: 64  DESSSSSNLFDVTIGDFDEEEDNDDEDWCFVDPT-VNSDDNFLLDSPYLHRLLRHLTSDN 123

Query: 122 SESDFVPSVPFNPFTPIKAS-VMAIPTIKVTSALL----------DEDPVLICAICKDQF 181
           S S+   S      + +K+S + +IPTI+++S++L          D D VL+CA+CK+ F
Sbjct: 124 SVSESGSSSS----SSLKSSDIESIPTIQISSSMLCSNPDLDLDLDPDSVLLCAVCKEDF 183

Query: 182 LLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTSALLRARDLM 241
           ++   AK+LPC+H+YH DCI+PWLS+H+SCPLCRF++P+   ++R+R    A +   D  
Sbjct: 184 VIGESAKRLPCNHIYHSDCIVPWLSDHNSCPLCRFEIPTTATNERIRLSDLATIVDGD-E 243

Query: 242 HQEDSYGLRTTLELMARRHSSI 252
            ++D  G+R  L  +ARRH  +
Sbjct: 244 EEDDWLGIRNALRRLARRHEEM 252

[Close]

BLAST of Cucsa.049930 vs. TAIR10
Match: AT3G60080.1 (AT3G60080.1 RING/U-box superfamily protein)

HSP 1 Score: 198.7 bits (504), Expect = 5.5e-51
Identity = 113/275 (41.09%), Postives = 160/275 (58.18%), Query Frame = 1


Query: 1   MSSATITATAA---AERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFI 60
           MSS+T T T      ER TYWCHECDMS++L+S      SS S S SS L+CP C  DF+
Sbjct: 1   MSSSTTTTTTVHGEPERRTYWCHECDMSLSLLS------SSDSDSDSSPLLCPQCRVDFL 60

Query: 61  EHMDFTIPTSSSSISD------NPNSSSPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFL 120
           E MD    +SSS++ D               + D   + FVDP  + SDDN+LL+SP   
Sbjct: 61  ERMDHD--SSSSNLFDVTIGDFEEQDGENDDEDDEEDWCFVDPA-VNSDDNFLLDSPYLH 120

Query: 121 RLFQHLADSSESDFVPSVPFNPFTPIKAS-VMAIPTIKVTSALL------DEDPVLICAI 180
           RL +HLA  +      S   +  + +K+S + +IPTI+++S+LL      D D VL+CA+
Sbjct: 121 RLLRHLASDNSGSSSSSSSSSSSSLLKSSDIDSIPTIQISSSLLCSTDDSDPDSVLLCAV 180

Query: 181 CKDQFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPS--------DDPSDRVR 240
           CK+ F++   A++LPCSH+YH DCI+PWLS+H+SCPLCRF+LP+         +   R+R
Sbjct: 181 CKEDFIIGESARRLPCSHIYHSDCIVPWLSDHNSCPLCRFELPTTAKVGIGGSEAEMRIR 240

Query: 241 CRTSALLRARDLMHQEDSYGLRTTLELMARRHSSI 252
               A + A     ++D  G+R  L  +ARRH  +
Sbjct: 241 LSDLATIAADGDDVEDDWLGIRNALRRLARRHEQM 266

[Close]

BLAST of Cucsa.049930 vs. TAIR10
Match: AT2G39720.1 (AT2G39720.1 RING-H2 finger C2A)

HSP 1 Score: 95.5 bits (236), Expect = 6.6e-20
Identity = 67/215 (31.16%), Postives = 112/215 (52.09%), Query Frame = 1


Query: 31  PSSSSSSSSSSSSSSSLVCPHCLT---------DFIEHMDFTIPTSSSSISDNPNSSSPP 90
           PSSSSS+ S+S  + +   P  +T           I         SS  +S+  + S+  
Sbjct: 63  PSSSSSTPSASMHADNSPTPTIVTRTRSNRSPNPVIVLRGSAAAPSSDVVSEGLDRSAFQ 122

Query: 91  TDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLA--DSSESDFVPSVPFNPFTPIKA 150
              D  +   + PLP  S   +LL S  F RL   ++  + + +  + S    P +  K+
Sbjct: 123 MYYDDGTDSGLRPLP-PSMTEFLLGSG-FDRLLDQISQIELNTNRNLRSCEHPPAS--KS 182

Query: 151 SVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPCSHLYHPDCILPWLSNHDSC 210
           ++ A+P I++    L  D    CA+CK+ F+L+  A+++PC+H+YHPDCILPWL+  +SC
Sbjct: 183 AIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSC 242

Query: 211 PLCRFKLPSDDPSDRVRCRTSALLRARDLMHQEDS 235
           P+CR +LP++D +D      +A+    +   +EDS
Sbjct: 243 PVCRHELPAEDLTDGTGAALTAVTATAE--EEEDS 271

[Close]

BLAST of Cucsa.049930 vs. TAIR10
Match: AT2G44330.1 (AT2G44330.1 RING/U-box superfamily protein)

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-19
Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = 1


Query: 123 SDFVPSVPF----NPFTPIKAS-----VMAIPTIKVTSALLD----EDPVLICAICKDQF 182
           S F  S PF    NPF   + S     + ++PTIK++S++L     +D  L CAIC++ F
Sbjct: 44  SYFTSSTPFEVGPNPFEDDEESQFLDPMESLPTIKISSSMLSSASSDDSALPCAICREDF 103

Query: 183 LLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSD 214
           ++   A++LPC+HLYH DCI+PWL++H+SCPLCR +LP     D
Sbjct: 104 VVGESARRLPCNHLYHNDCIIPWLTSHNSCPLCRVELPVASSED 147

[Close]

BLAST of Cucsa.049930 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 92.8 bits (229), Expect = 4.2e-19
Identity = 39/83 (46.99%), Postives = 59/83 (71.08%), Query Frame = 1


Query: 138 KASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPCSHLYHPDCILPWLSNHD 197
           K+++ A+PT+KVT  +L  + +  CA+C D+F    + KQ+PC H++H DC+LPWL  H+
Sbjct: 193 KSAIDALPTVKVTKDMLKSE-MNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHN 252

Query: 198 SCPLCRFKLPSDDPSDRVRCRTS 221
           SCP+CRF+LP+DDP    R + S
Sbjct: 253 SCPVCRFELPTDDPDYENRSQGS 274

[Close]

BLAST of Cucsa.049930 vs. TAIR10
Match: AT3G56580.2 (AT3G56580.2 RING/U-box superfamily protein)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-18
Identity = 46/120 (38.33%), Postives = 65/120 (54.17%), Query Frame = 1


Query: 108 PQFLRLFQHLADSSESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKD 167
           P    L + L+  +     P  P       K+S+ A+PTIK+T   L       C +CKD
Sbjct: 140 PGLEELIEQLSSGTHHRGPPPAP-------KSSIDALPTIKITQKHLKSSDSH-CPVCKD 199

Query: 168 QFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTSALLRARD 227
           +F L+ EAKQ+PC H+YH DCI+PWL  H+SCP+CR +LPS   S   +   +     R+
Sbjct: 200 EFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRGSSSSTQSSQNRSTNGRE 251

[Close]

BLAST of Cucsa.049930 vs. NCBI nr
Match: gi|778728773|ref|XP_004135900.2| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus])

HSP 1 Score: 671.4 bits (1731), Expect = 8.2e-190
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 1


Query: 1   MSSATITATAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEHM 60
           MSSATITATAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEHM
Sbjct: 1   MSSATITATAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEHM 60

Query: 61  DFTIPTSSSSISDNPNSSSPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLADS 120
           DFTIPTSSSSISDNPNSSSPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLADS
Sbjct: 61  DFTIPTSSSSISDNPNSSSPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLADS 120

Query: 121 SESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPC 180
           SESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPC
Sbjct: 121 SESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPC 180

Query: 181 SHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTSALLRARDLMHQEDSYGLRTT 240
           SHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTSALLRARDLMHQEDSYGLRTT
Sbjct: 181 SHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTSALLRARDLMHQEDSYGLRTT 240

Query: 241 LELMARRHSSISSEGIHVDSFQSPTQFGVAMMESGEQTDSVETVSSVATDDGIVIVNSNG 300
           LELMARRHSSISSEGIHVDSFQSPTQFGVAMMESGEQTDSVETVSSVATDDGIVIVNSNG
Sbjct: 241 LELMARRHSSISSEGIHVDSFQSPTQFGVAMMESGEQTDSVETVSSVATDDGIVIVNSNG 300

Query: 301 DENGFLGMDGPITEDAGTVVQDIGVSPSSFVSA 334
           DENGFLGMDGPITEDAGTVVQDIGVSPSSFVSA
Sbjct: 301 DENGFLGMDGPITEDAGTVVQDIGVSPSSFVSA 333

[Close]

BLAST of Cucsa.049930 vs. NCBI nr
Match: gi|659122605|ref|XP_008461232.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 644.8 bits (1662), Expect = 8.2e-182
Identity = 322/333 (96.70%), Postives = 327/333 (98.20%), Query Frame = 1


Query: 1   MSSATITATAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEHM 60
           MSSATITA AAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSS SL+CPHCLTDF+EHM
Sbjct: 1   MSSATITAAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSS-SLLCPHCLTDFLEHM 60

Query: 61  DFTIPTSSSSISDNPNSSSPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLADS 120
           DFTIPTSSSSISD+PNSSS PTDSDPSSFV VDPLPITSDDNYLLNSPQFLRLFQHLADS
Sbjct: 61  DFTIPTSSSSISDHPNSSSSPTDSDPSSFVVVDPLPITSDDNYLLNSPQFLRLFQHLADS 120

Query: 121 SESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPC 180
           SESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDED VLICAICKDQFLLEVEAKQLPC
Sbjct: 121 SESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDQVLICAICKDQFLLEVEAKQLPC 180

Query: 181 SHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTSALLRARDLMHQEDSYGLRTT 240
           SHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTSALLRARDLMHQEDSYGLRTT
Sbjct: 181 SHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTSALLRARDLMHQEDSYGLRTT 240

Query: 241 LELMARRHSSISSEGIHVDSFQSPTQFGVAMMESGEQTDSVETVSSVATDDGIVIVNSNG 300
           LELMARRHSSISSEGI+VDSFQSPTQFGVAMM SGEQTDSVETVSSVATDDGIVIVNSNG
Sbjct: 241 LELMARRHSSISSEGINVDSFQSPTQFGVAMMRSGEQTDSVETVSSVATDDGIVIVNSNG 300

Query: 301 DENGFLGMDGPITEDAGTVVQDIGVSPSSFVSA 334
           DENGF+GMDGPITEDAGTVVQDIGVSPSSFVSA
Sbjct: 301 DENGFVGMDGPITEDAGTVVQDIGVSPSSFVSA 332

[Close]

BLAST of Cucsa.049930 vs. NCBI nr
Match: gi|1009105994|ref|XP_015901739.1| (PREDICTED: uncharacterized protein LOC107434747 [Ziziphus jujuba])

HSP 1 Score: 219.5 bits (558), Expect = 8.5e-54
Identity = 149/351 (42.45%), Postives = 189/351 (53.85%), Query Frame = 1


Query: 1   MSSAT-----ITATAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTD 60
           MSSAT     I+ T   ERHTYWCHECD+SV+L              SSSSL+CPHC  +
Sbjct: 1   MSSATATDALISVTDPMERHTYWCHECDLSVSL------------RPSSSSLLCPHCFGN 60

Query: 61  FIEHMDFTIPTSSSSISDNPNSSSPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQ 120
           F+E MD  +         +P S  PP  S    F          DDN LL+SP   RL Q
Sbjct: 61  FLELMDSAL---------SPLSPPPPRSSSDIPFPLSAAAAAADDDNSLLDSPYLHRLVQ 120

Query: 121 HLA--DSSESDFVPSVPFNPFTPIK-ASVMAIPTIKVTSALLDEDPVLICAICKDQFLLE 180
           HL   D   ++  PS   +   P   A+V A+ T+K+ ++LL+ DP+L C +CKDQF+++
Sbjct: 121 HLTADDYYSNNPNPSTTNSSSLPASNAAVEALITVKIVASLLELDPLLFCPVCKDQFIVD 180

Query: 181 VEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTSAL-----LRARD 240
           VEAKQLPC HLYHPDCILPWL+NH +CP+CRF+LP+   +   R  TS L     LR  D
Sbjct: 181 VEAKQLPCKHLYHPDCILPWLANHSTCPVCRFQLPTRPINP--RRTTSGLVATTPLRFGD 240

Query: 241 -LMHQEDSYGLRTTLELMARRHSSISSEGIHVD----SFQSPTQFGVAM---MESGEQTD 300
            L  +ED +G R TL  MARRH  + SE I  +    S  SPTQ   A    M    +T 
Sbjct: 241 VLTGEEDWFGYRNTLRYMARRHMHLMSEAIGDENSNLSSLSPTQMAEAAEADMGFVARTS 300

Query: 301 SVETVSSVATDDGIVIVNSNGDENGFLGMDGPITEDAGTV-VQDIGVSPSS 330
           SVETVSS   + G       G     + + G   ED G   + D+ VS SS
Sbjct: 301 SVETVSSWPVEAGA------GSRE--MDVSGRANEDGGDAPMSDVKVSSSS 320

[Close]

BLAST of Cucsa.049930 vs. NCBI nr
Match: gi|976914416|gb|KVI00623.1| (Zinc finger, RING/FYVE/PHD-type [Cynara cardunculus var. scolymus])

HSP 1 Score: 218.8 bits (556), Expect = 1.5e-53
Identity = 136/335 (40.60%), Postives = 199/335 (59.40%), Query Frame = 1


Query: 2   SSATITATA--AAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEH 61
           ++AT+TA +  + +RHTYWCHECDMS++L+           SS+++SL+CPHC +DF+E 
Sbjct: 16  AAATVTAASNTSMDRHTYWCHECDMSISLIP----------SSTTASLLCPHCNSDFLEE 75

Query: 62  MDFTIP-TSSSSISDNPNSSSPPTDSDPSSFV--------FVDP-LPIT----------- 121
           +D  I   ++S++++NPN    P D D S+ V        F+DP LP             
Sbjct: 76  LDSPITFNNTSNVNNNPN----PDDHDDSNHVSSQLLFPSFLDPSLPAADYPTTFQFPPV 135

Query: 122 --SDDNYLLNSPQFLRLFQHLADSSESD-FVPSVPFNPFTPI-KASVMAIPTIKVTSALL 181
             SDDN+LL+SP F R+  HL +S +S     +      +P  K+++ AIP++K+TSA L
Sbjct: 136 APSDDNFLLDSPYFHRVIHHLFNSEDSSPSTTATTSRHHSPASKSAIEAIPSVKITSAFL 195

Query: 182 DEDPVLICAICKDQFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPSD--DPS 241
           + DP++ICA+CKDQF+++ E K+LPC H+YHPDCILPWLS H+SCP+CRF+LP++  D  
Sbjct: 196 EIDPIVICAVCKDQFVIDDETKELPCKHMYHPDCILPWLSQHNSCPVCRFQLPTEAVDGD 255

Query: 242 DRVRCRT-SALLRARDLMHQED-----SYGLRTTLELMARRHSSI-----------SSEG 287
            +VR R+ S +LR  DL+  ED      +GLR     +ARRH  +             E 
Sbjct: 256 LKVRRRSRSRVLRLGDLIDDEDDEELLGFGLRH----LARRHRLVFPMRHHHYRHPQVEE 315

[Close]

BLAST of Cucsa.049930 vs. NCBI nr
Match: gi|225450287|ref|XP_002271062.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera])

HSP 1 Score: 217.2 bits (552), Expect = 4.2e-53
Identity = 139/345 (40.29%), Postives = 184/345 (53.33%), Query Frame = 1


Query: 5   TITATAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEHMDFTI 64
           T TA  A +R TYWCHECDMSVTL         S SSSSS +L+CPHC +DF+E MD   
Sbjct: 11  TPTAATAIDRRTYWCHECDMSVTL---------SPSSSSSPTLLCPHCHSDFLEEMD--- 70

Query: 65  PTSSSSISDNPNSSSPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLADSSE-- 124
                  S NPN +  PT     +F F         +N+LL+SP   RL  HL   S+  
Sbjct: 71  -------SPNPNPNPNPT---APNFSF-------HSENFLLDSPYLHRLIHHLTHPSDTN 130

Query: 125 ------SDFVPSVPFNP--FTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVE 184
                 SD  P    NP      +AS+ A+PT K+T + L  DP+L CA+CKDQF+++VE
Sbjct: 131 NDGNDSSDLPPPRYLNPNSVAASRASLEALPTFKITPSFLQLDPILFCAVCKDQFVVDVE 190

Query: 185 AKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTSALLRARDLMHQEDS 244
           AK+LPC+H+YH DCILPWLS  +SCPLCRF+LP+D+  D      +  +   DLM   + 
Sbjct: 191 AKRLPCNHIYHSDCILPWLSQQNSCPLCRFRLPTDEGEDSGDAGATVTMTFGDLMEDHEL 250

Query: 245 YGLRTTLELMARRH----SSISSEGIHVDSFQSPTQFGVAMMESGEQTDSVETVSSVATD 304
           +GL +TL  +ARR+     ++S+EG              A  ES    +SVETVSS    
Sbjct: 251 FGLGSTLRHIARRNRLVFPALSAEG-----------QAQAQGESLGPDNSVETVSSWPRQ 310

Query: 305 DGIVIVNSNGDENG--FLGMDGPITEDAGTVVQDIGVSPSSFVSA 334
              V+V   G   G    G      EDA  ++ ++ VS S   S+
Sbjct: 311 ---VLVGGGGGGGGDADFGAGAVANEDADAMMPEVRVSGSVSASS 312

The following BLAST results are available for this feature:

BLAST of Cucsa.049930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RHC2A_ARATH	1.2e-18	31.16	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana GN=RHC2A PE=2...	[more]
RING1_GOSHI	4.4e-18	34.50	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1	[more]
RNG1L_ARATH	7.5e-18	46.99	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1...	[more]
RHC1A_ARATH	4.1e-16	38.94	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2...	[more]
CIP8_ARATH	6.0e-15	45.21	E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1	[more]

BLAST of Cucsa.049930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBK3_CUCSA	5.7e-190	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429620 PE=4 SV=1	[more]
A0A103Y170_CYNCS	1.0e-53	40.60	Zinc finger, RING/FYVE/PHD-type OS=Cynara cardunculus var. scolymus GN=Ccrd_0211...	[more]
F6HPS6_VITVI	2.9e-53	40.29	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0156g00140 PE=4 SV=...	[more]
A0A0V0HZ86_SOLCH	3.1e-50	40.21	Putative E3 ubiquitin-protein ligase RING1-like OS=Solanum chacoense PE=4 SV=1	[more]
A0A087GZB2_ARAAL	2.0e-49	42.37	Uncharacterized protein OS=Arabis alpina GN=AALP_AA5G255300 PE=4 SV=1	[more]

BLAST of Cucsa.049930 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60080.1	5.5e-51	41.09	RING/U-box superfamily protein	[more]
AT2G39720.1	6.6e-20	31.16	RING-H2 finger C2A	[more]
AT2G44330.1	1.9e-19	44.23	RING/U-box superfamily protein	[more]
AT3G19950.1	4.2e-19	46.99	RING/U-box superfamily protein	[more]
AT3G56580.2	1.6e-18	38.33	RING/U-box superfamily protein	[more]

BLAST of Cucsa.049930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778728773\|ref\|XP_004135900.2\|	8.2e-190	100.00	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]	[more]
gi\|659122605\|ref\|XP_008461232.1\|	8.2e-182	96.70	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo]	[more]
gi\|1009105994\|ref\|XP_015901739.1\|	8.5e-54	42.45	PREDICTED: uncharacterized protein LOC107434747 [Ziziphus jujuba]	[more]
gi\|976914416\|gb\|KVI00623.1\|	1.5e-53	40.60	Zinc finger, RING/FYVE/PHD-type [Cynara cardunculus var. scolymus]	[more]
gi\|225450287\|ref\|XP_002271062.1\|	4.2e-53	40.29	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.049930.1	Cucsa.049930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 162..203 score: 2.1
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 162..202 score: 2.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 162..203 score: 1
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 161..206 score: 6.5
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 275..327 score: 5.4E-55coord: 1..236 score: 5.4
None	No IPR available	PANTHER	PTHR22763:SF85	SUBFAMILY NOT NAMED	coord: 275..327 score: 5.4E-55coord: 1..236 score: 5.4
None	No IPR available	PFAM	PF14369	zinc_ribbon_9	coord: 16..60 score: 8.4
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 144..209 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.049930	Cla015285	Watermelon (97103) v1	cgywmB031
Cucsa.049930	Csa7G429620	Cucumber (Chinese Long) v2	cgycuB031
Cucsa.049930	MELO3C023504	Melon (DHL92) v3.5.1	cgymeB029
Cucsa.049930	ClCG09G003690	Watermelon (Charleston Gray)	cgywcgB033
Cucsa.049930	CSPI07G19690	Wild cucumber (PI 183967)	cgycpiB032
Cucsa.049930	CmaCh17G009230	Cucurbita maxima (Rimu)	cgycmaB0050
Cucsa.049930	CmoCh17G008940	Cucurbita moschata (Rifu)	cgycmoB0046
Cucsa.049930	Lsi02G026250	Bottle gourd (USVL1VR-Ls)	cgylsiB030
Cucsa.049930	Cp4.1LG12g07140	Cucurbita pepo (Zucchini)	cgycpeB0046
Cucsa.049930	MELO3C023504.2	Melon (DHL92) v3.6.1	cgymedB027
Cucsa.049930	CsaV3_7G031510	Cucumber (Chinese Long) v3	cgycucB033
Cucsa.049930	Cla97C09G165940	Watermelon (97103) v2	cgywmbB030
Cucsa.049930	Bhi09G000477	Wax gourd	cgywgoB034
Cucsa.049930	Carg18712	Silver-seed gourd	carcgyB0413

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.049930	Silver-seed gourd	carcgyB0519
Cucsa.049930	Silver-seed gourd	carcgyB0537
Cucsa.049930	Silver-seed gourd	carcgyB0593
Cucsa.049930	Cucumber (Chinese Long) v3	cgycucB031
Cucsa.049930	Watermelon (97103) v2	cgywmbB029
Cucsa.049930	Cucumber (Gy14) v1	cgycgyB010
Cucsa.049930	Cucurbita maxima (Rimu)	cgycmaB0051
Cucsa.049930	Cucurbita maxima (Rimu)	cgycmaB0052
Cucsa.049930	Cucurbita moschata (Rifu)	cgycmoB0045
Cucsa.049930	Cucurbita moschata (Rifu)	cgycmoB0047
Cucsa.049930	Wild cucumber (PI 183967)	cgycpiB031
Cucsa.049930	Cucumber (Chinese Long) v2	cgycuB030
Cucsa.049930	Watermelon (97103) v1	cgywmB033
Cucsa.049930	Cucurbita pepo (Zucchini)	cgycpeB0047
Cucsa.049930	Cucurbita pepo (Zucchini)	cgycpeB0048
Cucsa.049930	Cucurbita pepo (Zucchini)	cgycpeB0049
Cucsa.049930	Bottle gourd (USVL1VR-Ls)	cgylsiB032