Carg18712 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18712
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	E3 ubiquitin-protein ligase RING1-like
Location	Cucurbita_argyrosperma_scaffold_139 : 266365 .. 268888 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTCCGCCTCCGCCGCCACCGCCGCCGCCGCCGAACGGCACACCTACTGGTGCCACGAGTGCGATATGAGCGTCACTTTGGTATCTCCTTCTTCGTCTTCTTCGTCTTCTTCGTCTTCTTCTTCTTCTTCTTCCTCTCTCCTTTGCCCTCACTGCCTCACTGACTTCCTTGAACACATGGATTTCACCATACCCACTTCCTCTTCTTCAATTTCCGACCACCCCATTTCCTCTTCTTCCCCTCCAGATTCCGATCCGTCATCCTTCGTCATCGTCGACCCTCTTCCGACCACCTCCGATGACAATTACCTCCTCAGCAGCCCCCAATTCCTCCGCCTTTTCCAGCAGCTCGCGGATTCATCCGATTCCGATTTCGCCCCATCTGTACCCTTCAACCCATTTACTCCGATCAAAGCCTCTGTCATGGCGATTCCCACGATTAAAGTCTCCTCCGCCATGCTCGAGGAAGACCCAATTCTAATTTGTGCTATTTGCAAGGATAAGTTCCTTCTTGAGGTGGAAGCCAAACAGCTCCCCTGTTCTCATCTCTACCATCCTGATTGCATTCTTCCATGGCTTTCTAATCATGATTCGTGCCCTCTTTGCCGCTATAAGCTTCCTTCTGATGAACCTTCGGATCATGTGAGATGTAGAGGAGCAACTATGGCCTTGTTGAGGGCTAGGGACCTGATGCCTCAAGAAGATAGTTATGGGTTGCGGACTACTCTTGAACATATGGCTAGAAGGCATAGTTCTATTTTCAGTGAAGGAGTTCAAGTGGATTCGTCTCAATCTCCCACTCAGTTGGGGGTTGCTGTGATGGGAAATGGGGAACAGACTGACAGTGTTGAGACTGTTTCTAGTGTGGCTACTGATGATGGGATTGTAATTGTCAATAGCAGTGGTGATGAAAATGGGTTTGTGGTAATGGATGGACCAATAAATGAGGATGCTGGCACCTTAGCTTAGGATATTGGAGTTTCTCCTTCGAGTTTTGTTTCTGCAAATTTGAGGTTTGTGTTCTTCCTTTTTACTGCTGTTCTTTATTTGTTCTTCATGTTCTTGTAGTTCATGTTGATGTGGGGGATTTCTAAACTGAATTTGGAATGAACAGAGCTTATATTTGATTTAAATTAAGAACAGATAGAGTGGCTTGTGATTGAGTAGAGTTCTTAGAGCTTTAGAACTTATTGACTGGCAGGTTTGATACTCTTTTCAGGATTTGTGATATCTGTTATTGGGCTTGTTACTTGAAACATCCATTTAGAGCATCTTGGTCATAGATAAGGATTGAAGCTTGATCCAAGCTTTCAGCTCTTAGTTCCTACTGATGCCTCTTTGGCTGATAGGCGGCGATGATGCATAAAGATGCAAATTTGAAACCATTTAACAAAGCCCCTGATGAACATTTCCATCTAGAGTGACTTCCCAAGTGCCTAAAAATGGGGTTTTAATGCTAGAAAAAGGGGTTTTGAGCACTTAAGACTAGGTTTTTTGAGCTGGATGAACAAATCTTAGATTAGATGCACGAAACAATAAAACATCTTTTCAATCCGGAAATCAAACAAAACATGGAGGAAATATGTTGTGAGATCCCACGTCGATTGGAGAGGAAAACAATTGTCAGCAAGGACGCTGGACCTCGAAAGGGGGTGGATTGTAAGATCCCACACCGGTTGGGAAGGAGAACGAAGCATTGTTTATAAGGATGTCGAAACCTCTCCCTAGCAGCGTGTTTTCAAAACTTTGAGGGCAAGCCTGAAACGAAAAGCTCAAAGAGGACAATATATGCTAGCAGTGGGCTTGAGTTGCAAGATCGGTGTGCTTTTAACTTTGTAGAATATTTCTGGCATGCCTTCTTTATATTTGATGATCATAGGATTATGTGTACTATCATAGCATATTTCTGTCTTATCTTAACTAAATAGTCCTTCTGGATAACCTTAATATACAAAACTTAGCATTGAAGTAATTGTGTATTGGCTCAACACATCTCCAAATCATGTCTAAAAGATCAAATACTTGTTATTCCTTTTCAAAACAAAAGCGTTCGTCGTTCTTTACCAGATTATAACCGGAATCTCTTTTTTGCATTGCATAACGTCTTTCGTGTCGTTTTTATGCAACTACTGAGCTCCTATGAACTGCTAGAGTAAGACTTCTGGTTCTACTGTCTGAAAAACAACCTCAAATATGACAAGCTTACTCGAAGAACAGGATCTGTTCTGTCCTTAAGTTCTAAAAAACCGCATTGTTTGTGTTCTGTTTACTTATTTGTAGTGTCGTTTATTTATGACTGCAGGTAATGTAATAGGATATGGTTGTTAGAGGAATCTTAGAGAGGTACCACAAGTAGGTGATTGATTGGAAGTGTAAATTGCTACAGAGAAGGACTCTGCTTCTTCTTCTTCTTGTTCGTTCATCTTTGGTAACAATGTCTCTGCATAATAAGAGTTGAACCTTATTTACAGTGTTATCAGCTGCCAATGTTTCCCAATTCTCTGTCTCAGTCATGGTTTGA

mRNA sequence

ATGTCCTCCGCCTCCGCCGCCACCGCCGCCGCCGCCGAACGGCACACCTACTGGTGCCACGAGTGCGATATGAGCGTCACTTTGGTATCTCCTTCTTCGTCTTCTTCGTCTTCTTCGTCTTCTTCTTCTTCTTCTTCCTCTCTCCTTTGCCCTCACTGCCTCACTGACTTCCTTGAACACATGGATTTCACCATACCCACTTCCTCTTCTTCAATTTCCGACCACCCCATTTCCTCTTCTTCCCCTCCAGATTCCGATCCGTCATCCTTCGTCATCGTCGACCCTCTTCCGACCACCTCCGATGACAATTACCTCCTCAGCAGCCCCCAATTCCTCCGCCTTTTCCAGCAGCTCGCGGATTCATCCGATTCCGATTTCGCCCCATCTGTACCCTTCAACCCATTTACTCCGATCAAAGCCTCTGTCATGGCGATTCCCACGATTAAAGTCTCCTCCGCCATGCTCGAGGAAGACCCAATTCTAATTTGTGCTATTTGCAAGGATAAGTTCCTTCTTGAGGTGGAAGCCAAACAGCTCCCCTGTTCTCATCTCTACCATCCTGATTGCATTCTTCCATGGCTTTCTAATCATGATTCGTGCCCTCTTTGCCGCTATAAGCTTCCTTCTGATGAACCTTCGGATCATGTGAGATGTAGAGGAGCAACTATGGCCTTGTTGAGGGCTAGGGACCTGATGCCTCAAGAAGATAGTTATGGGTTGCGGACTACTCTTGAACATATGGCTAGAAGGCATAGTTCTATTTTCAGTGAAGGAGTTCAAGTGGATTCGTCTCAATCTCCCACTCAGTTGGGGGTTGCTGTGATGGGAAATGGGGAACAGACTGACAGTGTTGAGACTGTTTCTAGTGTGGCTACTGATGATGGGATTGTAATTGTCAATAGCAGTGGTGATGAAAATGGGTTTGTGTGTCGTTTATTTATGACTGCAGTGTTATCAGCTGCCAATGTTTCCCAATTCTCTGTCTCAGTCATGGTTTGA

Coding sequence (CDS)

ATGTCCTCCGCCTCCGCCGCCACCGCCGCCGCCGCCGAACGGCACACCTACTGGTGCCACGAGTGCGATATGAGCGTCACTTTGGTATCTCCTTCTTCGTCTTCTTCGTCTTCTTCGTCTTCTTCTTCTTCTTCTTCCTCTCTCCTTTGCCCTCACTGCCTCACTGACTTCCTTGAACACATGGATTTCACCATACCCACTTCCTCTTCTTCAATTTCCGACCACCCCATTTCCTCTTCTTCCCCTCCAGATTCCGATCCGTCATCCTTCGTCATCGTCGACCCTCTTCCGACCACCTCCGATGACAATTACCTCCTCAGCAGCCCCCAATTCCTCCGCCTTTTCCAGCAGCTCGCGGATTCATCCGATTCCGATTTCGCCCCATCTGTACCCTTCAACCCATTTACTCCGATCAAAGCCTCTGTCATGGCGATTCCCACGATTAAAGTCTCCTCCGCCATGCTCGAGGAAGACCCAATTCTAATTTGTGCTATTTGCAAGGATAAGTTCCTTCTTGAGGTGGAAGCCAAACAGCTCCCCTGTTCTCATCTCTACCATCCTGATTGCATTCTTCCATGGCTTTCTAATCATGATTCGTGCCCTCTTTGCCGCTATAAGCTTCCTTCTGATGAACCTTCGGATCATGTGAGATGTAGAGGAGCAACTATGGCCTTGTTGAGGGCTAGGGACCTGATGCCTCAAGAAGATAGTTATGGGTTGCGGACTACTCTTGAACATATGGCTAGAAGGCATAGTTCTATTTTCAGTGAAGGAGTTCAAGTGGATTCGTCTCAATCTCCCACTCAGTTGGGGGTTGCTGTGATGGGAAATGGGGAACAGACTGACAGTGTTGAGACTGTTTCTAGTGTGGCTACTGATGATGGGATTGTAATTGTCAATAGCAGTGGTGATGAAAATGGGTTTGTGTGTCGTTTATTTATGACTGCAGTGTTATCAGCTGCCAATGTTTCCCAATTCTCTGTCTCAGTCATGGTTTGA

Protein sequence

MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEHMDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGLRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVNSSGDENGFVCRLFMTAVLSAANVSQFSVSVMV

Homology

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BLAST of Carg18712 vs. NCBI nr
Match: XP_022991911.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima])

HSP 1 Score: 561.2 bits (1445), Expect = 2.3e-156
Identity = 307/309 (99.35%), Postives = 308/309 (99.68%), Query Frame = 0


Query: 1   MSSASAATAAAAERHTYWCHECDMSVTXXXXXXXXXXXXXXXXXXXXXLCPHCLTDFLEH 60
           MSSASAATAAAAERHTYWCHECDMSVTXXXXXXXXXXXXXXXXXXXXXLCPHCLTDFLEH
Sbjct: 1   MSSASAATAAAAERHTYWCHECDMSVTXXXXXXXXXXXXXXXXXXXXXLCPHCLTDFLEH 60

Query: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120
           MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD
Sbjct: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120

Query: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLP 180
           SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLL+VEAKQLP
Sbjct: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLDVEAKQLP 180

Query: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240
           CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL
Sbjct: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240

Query: 241 RTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300
           RTTLEHMARRHSSIFSEGVQVD SQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN
Sbjct: 241 RTTLEHMARRHSSIFSEGVQVDPSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300

Query: 301 SSGDENGFV 310
           SSGDENGFV
Sbjct: 301 SSGDENGFV 309

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BLAST of Carg18712 vs. NCBI nr
Match: XP_023549060.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 559.7 bits (1441), Expect = 6.7e-156
Identity = 309/310 (99.68%), Postives = 309/310 (99.68%), Query Frame = 0


Query: 1   MSSASAATAAAAERHTYWCHECDMSVT-XXXXXXXXXXXXXXXXXXXXXLCPHCLTDFLE 60
           MSSASAATAAAAERHTYWCHECDMSVT XXXXXXXXXXXXXXXXXXXXXLCPHCLTDFLE
Sbjct: 1   MSSASAATAAAAERHTYWCHECDMSVTXXXXXXXXXXXXXXXXXXXXXXLCPHCLTDFLE 60

Query: 61  HMDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA 120
           HMDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA
Sbjct: 61  HMDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA 120

Query: 121 DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL 180
           DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL
Sbjct: 121 DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL 180

Query: 181 PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG 240
           PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG
Sbjct: 181 PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG 240

Query: 241 LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV 300
           LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV
Sbjct: 241 LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV 300

Query: 301 NSSGDENGFV 310
           NSSGDENGFV
Sbjct: 301 NSSGDENGFV 310

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BLAST of Carg18712 vs. NCBI nr
Match: XP_022953211.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata])

HSP 1 Score: 547.0 bits (1408), Expect = 4.5e-152
Identity = 303/310 (97.74%), Postives = 303/310 (97.74%), Query Frame = 0


Query: 1   MSSASAATAAAAERHTYWCHECDMSVT-XXXXXXXXXXXXXXXXXXXXXLCPHCLTDFLE 60
           MSSASAATAAAAERHTYWCHECDMSVT XXXXXXXXXXXXXXXXXXXXXLCPHCLTDFLE
Sbjct: 1   MSSASAATAAAAERHTYWCHECDMSVTXXXXXXXXXXXXXXXXXXXXXXLCPHCLTDFLE 60

Query: 61  HMDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA 120
           HMDFTIPTSSSSISDHP      PDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA
Sbjct: 61  HMDFTIPTSSSSISDHPXXXXXXPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA 120

Query: 121 DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL 180
           DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL
Sbjct: 121 DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL 180

Query: 181 PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG 240
           PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG
Sbjct: 181 PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG 240

Query: 241 LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV 300
           LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV
Sbjct: 241 LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV 300

Query: 301 NSSGDENGFV 310
           NSSGDENGFV
Sbjct: 301 NSSGDENGFV 310

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BLAST of Carg18712 vs. NCBI nr
Match: XP_008461232.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 483.4 bits (1243), Expect = 6.1e-133
Identity = 267/309 (86.41%), Postives = 282/309 (91.26%), Query Frame = 0


Query: 1   MSSASAATAAAAERHTYWCHECDMSVTXXXXXXXXXXXXXXXXXXXXXLCPHCLTDFLEH 60
           MSSA+   AAAAERHTYWCHECDMSVT    XXXXXXXXXXXXXXXXXLCPHCLTDFLEH
Sbjct: 1   MSSATITAAAAAERHTYWCHECDMSVT--LVXXXXXXXXXXXXXXXXXLCPHCLTDFLEH 60

Query: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120
           MDFTIPTSSSSISDHP    SP DSDPSSFV+VDPLP TSDDNYLL+SPQFLRLFQ LAD
Sbjct: 61  MDFTIPTSSSSISDHPNXXXSPTDSDPSSFVVVDPLPITSDDNYLLNSPQFLRLFQHLAD 120

Query: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLP 180
           SS+SDF PSVPFNPFTPIKASVMAIPTIKV+SA+L+ED +LICAICKD+FLLEVEAKQLP
Sbjct: 121 SSESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDQVLICAICKDQFLLEVEAKQLP 180

Query: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240
           CSHLYHPDCILPWLSNHDSCPLCR+KLPSD+PSD VRCR  T ALLRARDLM QEDSYGL
Sbjct: 181 CSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCR--TSALLRARDLMHQEDSYGL 240

Query: 241 RTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300
           RTTLE MARRHSSI SEG+ VDS QSPTQ GVA+M +GEQTDSVETVSSVATDDGIVIVN
Sbjct: 241 RTTLELMARRHSSISSEGINVDSFQSPTQFGVAMMRSGEQTDSVETVSSVATDDGIVIVN 300

Query: 301 SSGDENGFV 310
           S+GDENGFV
Sbjct: 301 SNGDENGFV 305

[Close]

BLAST of Carg18712 vs. NCBI nr
Match: XP_004135900.2 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >KGN45176.1 hypothetical protein Csa_7G429620 [Cucumis sativus])

HSP 1 Score: 476.1 bits (1224), Expect = 9.8e-131
Identity = 264/309 (85.44%), Postives = 282/309 (91.26%), Query Frame = 0


Query: 1   MSSASAATAAAAERHTYWCHECDMSVTXXXXXXXXXXXXXXXXXXXXXLCPHCLTDFLEH 60
           MSSA+    AAAERHTYWCHECDMSVT  XXXXXXXXXXXXXXXXXXX+CPHCLTDF+EH
Sbjct: 1   MSSATITATAAAERHTYWCHECDMSVT-LXXXXXXXXXXXXXXXXXXXVCPHCLTDFIEH 60

Query: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120
           MDFTIPTSSSSISD+P     P DSDPSSFV VDPLP TSDDNYLL+SPQFLRLFQ LAD
Sbjct: 61  MDFTIPTSSSSISDNPNXXXPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLAD 120

Query: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLP 180
           SS+SDF PSVPFNPFTPIKASVMAIPTIKV+SA+L+EDP+LICAICKD+FLLEVEAKQLP
Sbjct: 121 SSESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLP 180

Query: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240
           CSHLYHPDCILPWLSNHDSCPLCR+KLPSD+PSD VRCR  T ALLRARDLM QEDSYGL
Sbjct: 181 CSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCR--TSALLRARDLMHQEDSYGL 240

Query: 241 RTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300
           RTTLE MARRHSSI SEG+ VDS QSPTQ GVA+M +GEQTDSVETVSSVATDDGIVIVN
Sbjct: 241 RTTLELMARRHSSISSEGIHVDSFQSPTQFGVAMMESGEQTDSVETVSSVATDDGIVIVN 300

Query: 301 SSGDENGFV 310
           S+GDENGF+
Sbjct: 301 SNGDENGFL 306

[Close]

BLAST of Carg18712 vs. TAIR10
Match: AT3G60080.1 (RING/U-box superfamily protein)

HSP 1 Score: 145.6 bits (366), Expect = 5.5e-35
Identity = 106/261 (40.61%), Postives = 143/261 (54.79%), Query Frame = 0


Query: 13  ERHTYWCHECDMSVTXXXXXXXXXXXXXXXXXXXXXLCPHCLTDFLEHMDFTIPTSSSSI 72
           ER TYWCHECDMS       XXXXXXXXXXXXX   LCP C  DFLE MD    +SSS++
Sbjct: 16  ERRTYWCHECDMS-------XXXXXXXXXXXXXSPLLCPQCRVDFLERMDH--DSSSSNL 75

Query: 73  SDHPISSSSPPDS------DPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD-SSDSD 132
            D  I      D           +  VDP    SDDN+LL SP   RL + LA       
Sbjct: 76  FDVTIGDFEEQDGXXXXXXXXXXWCFVDP-AVNSDDNFLLDSPYLHRLLRHLASXXXXXX 135

Query: 133 FAPSVPFNPFTPIKASVMAIPTIKVSSAML------EEDPILICAICKDKFLLEVEAKQL 192
                           + +IPTI++SS++L      + D +L+CA+CK+ F++   A++L
Sbjct: 136 XXXXXXXXXXXXXXXDIDSIPTIQISSSLLCSTDDSDPDSVLLCAVCKEDFIIGESARRL 195

Query: 193 PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDE------PSDHVRCRGATMALLRARDLMP 252
           PCSH+YH DCI+PWLS+H+SCPLCR++LP+            +R R + +A + A     
Sbjct: 196 PCSHIYHSDCIVPWLSDHNSCPLCRFELPTTAKVGIGGSEAEMRIRLSDLATIAADGDDV 255

Query: 253 QEDSYGLRTTLEHMARRHSSI 255
           ++D  G+R  L  +ARRH  +
Sbjct: 256 EDDWLGIRNALRRLARRHEQM 266

[Close]

BLAST of Carg18712 vs. TAIR10
Match: AT3G19950.1 (RING/U-box superfamily protein)

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-19
Identity = 45/115 (39.13%), Postives = 74/115 (64.35%), Query Frame = 0


Query: 109 PQFLRLFQQLADSSDSDFAPSVPFNPFTP--IKASVMAIPTIKVSSAMLEEDPILICAIC 168
           P   +L QQLA++  + +         TP   K+++ A+PT+KV+  ML+ + +  CA+C
Sbjct: 169 PGLEQLIQQLAENDPNRYG--------TPPASKSAIDALPTVKVTKDMLKSE-MNQCAVC 228

Query: 169 KDKFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGA 222
            D+F    + KQ+PC H++H DC+LPWL  H+SCP+CR++LP+D+P    R +G+
Sbjct: 229 MDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGS 274

[Close]

BLAST of Carg18712 vs. TAIR10
Match: AT2G39720.1 (RING-H2 finger C2A)

HSP 1 Score: 92.8 bits (229), Expect = 4.2e-19
Identity = 39/102 (38.24%), Postives = 68/102 (66.67%), Query Frame = 0


Query: 139 KASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLPCSHLYHPDCILPWLSNHD 198
           K+++ A+P I++    L  D    CA+CK+ F+L+  A+++PC+H+YHPDCILPWL+  +
Sbjct: 177 KSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRN 236

Query: 199 SCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 241
           SCP+CR++LP+++ +D     GA +  + A     ++ + GL
Sbjct: 237 SCPVCRHELPAEDLTDGT---GAALTAVTATAEEEEDSAAGL 275

[Close]

BLAST of Carg18712 vs. TAIR10
Match: AT3G56580.2 (RING/U-box superfamily protein)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-18
Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 0


Query: 109 PQFLRLFQQLADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKD 168
           P    L +QL+  +     P  P       K+S+ A+PTIK++   L+      C +CKD
Sbjct: 140 PGLEELIEQLSSGTHHRGPPPAP-------KSSIDALPTIKITQKHLKSSD-SHCPVCKD 199

Query: 169 KFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRYKLPS 210
           +F L+ EAKQ+PC H+YH DCI+PWL  H+SCP+CR +LPS
Sbjct: 200 EFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPS 232

[Close]

BLAST of Carg18712 vs. TAIR10
Match: AT2G44330.1 (RING/U-box superfamily protein)

HSP 1 Score: 90.5 bits (223), Expect = 2.1e-18
Identity = 57/161 (35.40%), Postives = 84/161 (52.17%), Query Frame = 0


Query: 58  LEHMDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQ 117
           LE  D+T P  +  +    + S+SPP             P  +  +Y  SS  F      
Sbjct: 10  LEMRDYTCPECNIGLRVLSLPSASPP-----------YCPLCNVASYFTSSTPFEVGPNP 69

Query: 118 LADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAML----EEDPILICAICKDKFLLE 177
             D  +S F          P++    ++PTIK+SS+ML     +D  L CAIC++ F++ 
Sbjct: 70  FEDDEESQF--------LDPME----SLPTIKISSSMLSSASSDDSALPCAICREDFVVG 129

Query: 178 VEAKQLPCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSD 215
             A++LPC+HLYH DCI+PWL++H+SCPLCR +LP     D
Sbjct: 130 ESARRLPCNHLYHNDCIIPWLTSHNSCPLCRVELPVASSED 147

[Close]

BLAST of Carg18712 vs. Swiss-Prot
Match: sp|P0CH30|RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.9e-19
Identity = 50/128 (39.06%), Postives = 75/128 (58.59%), Query Frame = 0


Query: 96  LPTTSDDNYLLSSPQFLRLFQQLADSSDSDFAPSVPFNPFTP--IKASVMAIPTIKVSSA 155
           LP    D ++   P   +L QQLA++  + +         TP   K+++ A+P + ++ +
Sbjct: 166 LPANIGDYFI--GPGLEQLIQQLAENDPNRYG--------TPPASKSAIEALPLVNITKS 225

Query: 156 MLEEDPILICAICKDKFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPS 215
            L  +    CA+C D F    EAKQ+PC HLYH DC+LPWL  H+SCP+CR++LP+D+P 
Sbjct: 226 NLNSE-FNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPD 282

Query: 216 DHVRCRGA 222
              R RGA
Sbjct: 286 YERRVRGA 282

[Close]

BLAST of Carg18712 vs. Swiss-Prot
Match: sp|Q8LPN7|RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.4e-18
Identity = 45/115 (39.13%), Postives = 74/115 (64.35%), Query Frame = 0


Query: 109 PQFLRLFQQLADSSDSDFAPSVPFNPFTP--IKASVMAIPTIKVSSAMLEEDPILICAIC 168
           P   +L QQLA++  + +         TP   K+++ A+PT+KV+  ML+ + +  CA+C
Sbjct: 169 PGLEQLIQQLAENDPNRYG--------TPPASKSAIDALPTVKVTKDMLKSE-MNQCAVC 228

Query: 169 KDKFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGA 222
            D+F    + KQ+PC H++H DC+LPWL  H+SCP+CR++LP+D+P    R +G+
Sbjct: 229 MDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGS 274

[Close]

BLAST of Carg18712 vs. Swiss-Prot
Match: sp|O22283|RHC2A_ARATH (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.6e-18
Identity = 39/102 (38.24%), Postives = 68/102 (66.67%), Query Frame = 0


Query: 139 KASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLPCSHLYHPDCILPWLSNHD 198
           K+++ A+P I++    L  D    CA+CK+ F+L+  A+++PC+H+YHPDCILPWL+  +
Sbjct: 177 KSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRN 236

Query: 199 SCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 241
           SCP+CR++LP+++ +D     GA +  + A     ++ + GL
Sbjct: 237 SCPVCRHELPAEDLTDGT---GAALTAVTATAEEEEDSAAGL 275

[Close]

BLAST of Carg18712 vs. Swiss-Prot
Match: sp|Q94AK4|RZF1_ARATH (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.9e-17
Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 0


Query: 109 PQFLRLFQQLADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKD 168
           P    L +QL+  +     P  P       K+S+ A+PTIK++   L+      C +CKD
Sbjct: 140 PGLEELIEQLSSGTHHRGPPPAP-------KSSIDALPTIKITQKHLKSSD-SHCPVCKD 199

Query: 169 KFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRYKLPS 210
           +F L+ EAKQ+PC H+YH DCI+PWL  H+SCP+CR +LPS
Sbjct: 200 EFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPS 232

[Close]

BLAST of Carg18712 vs. Swiss-Prot
Match: sp|O22197|RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.4e-17
Identity = 43/101 (42.57%), Postives = 62/101 (61.39%), Query Frame = 0


Query: 109 PQFLRLFQQLADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKD 168
           P    LF+QL+  +     P  P       ++++ A+PTIK++   L       C +CKD
Sbjct: 144 PGLEELFEQLSAGTTRRGPPPAP-------RSAIDALPTIKIAQRHLRSSD-SNCPVCKD 203

Query: 169 KFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRYKLPS 210
           +F L  EAKQ+PC+H+YH DCI+PWL  H+SCP+CR +LPS
Sbjct: 204 EFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS 236

[Close]

BLAST of Carg18712 vs. TrEMBL
Match: tr|A0A1S3CE92|A0A1S3CE92_CUCME (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103499880 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 4.0e-133
Identity = 267/309 (86.41%), Postives = 282/309 (91.26%), Query Frame = 0


Query: 1   MSSASAATAAAAERHTYWCHECDMSVTXXXXXXXXXXXXXXXXXXXXXLCPHCLTDFLEH 60
           MSSA+   AAAAERHTYWCHECDMSVT    XXXXXXXXXXXXXXXXXLCPHCLTDFLEH
Sbjct: 1   MSSATITAAAAAERHTYWCHECDMSVT--LVXXXXXXXXXXXXXXXXXLCPHCLTDFLEH 60

Query: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120
           MDFTIPTSSSSISDHP    SP DSDPSSFV+VDPLP TSDDNYLL+SPQFLRLFQ LAD
Sbjct: 61  MDFTIPTSSSSISDHPNXXXSPTDSDPSSFVVVDPLPITSDDNYLLNSPQFLRLFQHLAD 120

Query: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLP 180
           SS+SDF PSVPFNPFTPIKASVMAIPTIKV+SA+L+ED +LICAICKD+FLLEVEAKQLP
Sbjct: 121 SSESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDQVLICAICKDQFLLEVEAKQLP 180

Query: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240
           CSHLYHPDCILPWLSNHDSCPLCR+KLPSD+PSD VRCR  T ALLRARDLM QEDSYGL
Sbjct: 181 CSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCR--TSALLRARDLMHQEDSYGL 240

Query: 241 RTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300
           RTTLE MARRHSSI SEG+ VDS QSPTQ GVA+M +GEQTDSVETVSSVATDDGIVIVN
Sbjct: 241 RTTLELMARRHSSISSEGINVDSFQSPTQFGVAMMRSGEQTDSVETVSSVATDDGIVIVN 300

Query: 301 SSGDENGFV 310
           S+GDENGFV
Sbjct: 301 SNGDENGFV 305

[Close]

BLAST of Carg18712 vs. TrEMBL
Match: tr|A0A0A0KBK3|A0A0A0KBK3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429620 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 6.5e-131
Identity = 264/309 (85.44%), Postives = 282/309 (91.26%), Query Frame = 0


Query: 1   MSSASAATAAAAERHTYWCHECDMSVTXXXXXXXXXXXXXXXXXXXXXLCPHCLTDFLEH 60
           MSSA+    AAAERHTYWCHECDMSVT  XXXXXXXXXXXXXXXXXXX+CPHCLTDF+EH
Sbjct: 1   MSSATITATAAAERHTYWCHECDMSVT-LXXXXXXXXXXXXXXXXXXXVCPHCLTDFIEH 60

Query: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120
           MDFTIPTSSSSISD+P     P DSDPSSFV VDPLP TSDDNYLL+SPQFLRLFQ LAD
Sbjct: 61  MDFTIPTSSSSISDNPNXXXPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLAD 120

Query: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLP 180
           SS+SDF PSVPFNPFTPIKASVMAIPTIKV+SA+L+EDP+LICAICKD+FLLEVEAKQLP
Sbjct: 121 SSESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLP 180

Query: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240
           CSHLYHPDCILPWLSNHDSCPLCR+KLPSD+PSD VRCR  T ALLRARDLM QEDSYGL
Sbjct: 181 CSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCR--TSALLRARDLMHQEDSYGL 240

Query: 241 RTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300
           RTTLE MARRHSSI SEG+ VDS QSPTQ GVA+M +GEQTDSVETVSSVATDDGIVIVN
Sbjct: 241 RTTLELMARRHSSISSEGIHVDSFQSPTQFGVAMMESGEQTDSVETVSSVATDDGIVIVN 300

Query: 301 SSGDENGFV 310
           S+GDENGF+
Sbjct: 301 SNGDENGFL 306

[Close]

BLAST of Carg18712 vs. TrEMBL
Match: tr|A0A103Y170|A0A103Y170_CYNCS (Zinc finger, RING/FYVE/PHD-type OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_021127 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 4.2e-45
Identity = 130/345 (37.68%), Postives = 191/345 (55.36%), Query Frame = 0


Query: 13  ERHTYWCHECDMSVTXXXXXXXXXXXXXXXXXXXXXLCPHCLTDFLEHMDFTIP-TSSSS 72
           +RHTYWCHECDMS++                     LCPHC +DFLE +D  I   ++S+
Sbjct: 29  DRHTYWCHECDMSIS-----------LIPSSTTASLLCPHCNSDFLEELDSPITFNNTSN 88

Query: 73  ISDHPISSSSPPDSDPSSFV--------IVDP------LPTT--------SDDNYLLSSP 132
           ++++P    +P D D S+ V         +DP       PTT        SDDN+LL SP
Sbjct: 89  VNNNP----NPDDHDDSNHVSSQLLFPSFLDPSLPAADYPTTFQFPPVAPSDDNFLLDSP 148

Query: 133 QFLRLFQQLADSSDSDFAPSVPFNPF--TPIKASVMAIPTIKVSSAMLEEDPILICAICK 192
            F R+   L +S DS  + +   +       K+++ AIP++K++SA LE DPI+ICA+CK
Sbjct: 149 YFHRVIHHLFNSEDSSPSTTATTSRHHSPASKSAIEAIPSVKITSAFLEIDPIVICAVCK 208

Query: 193 DKFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMA-LL 252
           D+F+++ E K+LPC H+YHPDCILPWLS H+SCP+CR++LP++     ++ R  + + +L
Sbjct: 209 DQFVIDDETKELPCKHMYHPDCILPWLSQHNSCPVCRFQLPTEAVDGDLKVRRRSRSRVL 268

Query: 253 RARDLMPQED-----SYGLRTTLEHMARRHSSIFS------EGVQVDSSQ-----SPTQL 304
           R  DL+  ED      +GLR    H+ARRH  +F          QV+  +     S TQ+
Sbjct: 269 RLGDLIDDEDDEELLGFGLR----HLARRHRLVFPMRHHHYRHPQVEEEEPEVLFSSTQI 328

[Close]

BLAST of Carg18712 vs. TrEMBL
Match: tr|A0A0V0HZ86|A0A0V0HZ86_SOLCH (Putative E3 ubiquitin-protein ligase RING1-like OS=Solanum chacoense OX=4108 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 9.3e-45
Identity = 111/280 (39.64%), Postives = 159/280 (56.79%), Query Frame = 0


Query: 15  HTYWCHECDMSVTXXXXXXXXXXXXXXXXXXXXXLCPHCLTDFLEHMDFTIPTSSSSISD 74
           HT+WCHECDMSV                       CPHC +DFLEHMD   PT      +
Sbjct: 13  HTFWCHECDMSV------------FLLHPTPNNPRCPHCHSDFLEHMDSITPTILPQFPN 72

Query: 75  HPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLADSSDSDFAPSVPFNP 134
           HP         +P+S +      T SDDN+LL+SP   RL + L  ++D   AP+   + 
Sbjct: 73  HP---------NPTSDIETPTTFTPSDDNFLLNSPYLHRLIRHLTTTND---APTPNPHN 132

Query: 135 FTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLPCSHLYHPDCILPWL 194
            +  +++V A+  ++++S+MLE DP + CA+CKD+FLL+++ K LPC H+YH DCILPWL
Sbjct: 133 NSASRSAVAALELLQITSSMLENDPDIPCAVCKDQFLLDMQVKMLPCKHMYHSDCILPWL 192

Query: 195 SNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGLRTTLEHMARRHSSI 254
             ++SCP+CR++LP++E     R +    A+     L  QED +G R TL  +ARRH   
Sbjct: 193 EMNNSCPVCRFQLPTEEDEVCRRRQNFVAAMRLEEFLGEQEDLFGFRRTLRRVARRHHLD 252

Query: 255 FSEGVQVDSSQ---SPTQLGVAVMGNG--EQTDSVETVSS 290
             +  + DS +   SPTQ+G    G+G   + +SVETVSS
Sbjct: 253 REDTTRGDSLEFLLSPTQIGQTGQGDGVVARANSVETVSS 268

[Close]

BLAST of Carg18712 vs. TrEMBL
Match: tr|A0A2G3BDQ4|A0A2G3BDQ4_CAPCH (Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_25443 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 4.6e-44
Identity = 119/297 (40.07%), Postives = 166/297 (55.89%), Query Frame = 0


Query: 1   MSSASAATAAAAERHTYWCHECDMSVTXXXXXXXXXXXXXXXXXXXXXLCPHCLTDFLEH 60
           MS+ ++AT      HT+WCHECDMSV                       CPHC +DFLE 
Sbjct: 1   MSTTTSAT-PPQPHHTFWCHECDMSV------------FLLHPPPTNPRCPHCHSDFLEQ 60

Query: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120
           MD   PT      +HP  S S     P            SDDN+LL+SP   RL + L  
Sbjct: 61  MDSFTPTLVPQFPNHPNPSHSSDTFTP------------SDDNFLLNSPYLQRLIRHLTT 120

Query: 121 SSDSDFA-PSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL 180
           ++D   A  +      +  +++V A+  +++SS+MLE DP++ CA+CKD+FLL+++ K L
Sbjct: 121 TNDGPAATANANHQNSSASRSAVEALEVLQISSSMLENDPVIPCAVCKDQFLLDMQVKML 180

Query: 181 PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLM--PQEDS 240
           PC H+YH DCILPWL +++SCP+CR++LPS+E  +  R R    A +R  +LM   QED+
Sbjct: 181 PCKHMYHSDCILPWLESNNSCPVCRFRLPSEE-DEVCRRRQNFAAAMRLEELMGGEQEDA 240

Query: 241 YGLRTTLEHMARRHSSIFSEGVQVDSSQ---SPTQLGVAVMGNGEQT--DSVETVSS 290
           +G R TL  +ARRH     +  + DS +   S TQ+G A  G G  T  +SVETVSS
Sbjct: 241 FGFRRTLRRVARRHQLDREDTTRGDSLEFLLSSTQIGQAGQGIGVVTRANSVETVSS 271

The following BLAST results are available for this feature:

BLAST of Carg18712 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991911.1	2.3e-156	99.35	E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima]	[more]
XP_023549060.1	6.7e-156	99.68	E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022953211.1	4.5e-152	97.74	E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]	[more]
XP_008461232.1	6.1e-133	86.41	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo]	[more]
XP_004135900.2	9.8e-131	85.44	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >KGN45176.1 ...	[more]

BLAST of Carg18712 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60080.1	5.5e-35	40.61	RING/U-box superfamily protein	[more]
AT3G19950.1	1.9e-19	39.13	RING/U-box superfamily protein	[more]
AT2G39720.1	4.2e-19	38.24	RING-H2 finger C2A	[more]
AT3G56580.2	1.6e-18	43.56	RING/U-box superfamily protein	[more]
AT2G44330.1	2.1e-18	35.40	RING/U-box superfamily protein	[more]

BLAST of Carg18712 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P0CH30\|RING1_GOSHI	6.9e-19	39.06	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
sp\|Q8LPN7\|RNG1L_ARATH	3.4e-18	39.13	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
sp\|O22283\|RHC2A_ARATH	7.6e-18	38.24	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
sp\|Q94AK4\|RZF1_ARATH	2.9e-17	43.56	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
sp\|O22197\|RHC1A_ARATH	6.4e-17	42.57	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]

BLAST of Carg18712 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CE92\|A0A1S3CE92_CUCME	4.0e-133	86.41	E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103499880 P...	[more]
tr\|A0A0A0KBK3\|A0A0A0KBK3_CUCSA	6.5e-131	85.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429620 PE=4 SV=1	[more]
tr\|A0A103Y170\|A0A103Y170_CYNCS	4.2e-45	37.68	Zinc finger, RING/FYVE/PHD-type OS=Cynara cardunculus var. scolymus OX=59895 GN=...	[more]
tr\|A0A0V0HZ86\|A0A0V0HZ86_SOLCH	9.3e-45	39.64	Putative E3 ubiquitin-protein ligase RING1-like OS=Solanum chacoense OX=4108 PE=...	[more]
tr\|A0A2G3BDQ4\|A0A2G3BDQ4_CAPCH	4.6e-44	40.07	Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_25443 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18712-RA	Carg18712-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 163..203 e-value: 2.4E-6 score: 37.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 163..204 e-value: 4.0E-10 score: 39.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 163..204 score: 12.165
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 135..210 e-value: 4.2E-17 score: 63.6
None	No IPR available	PFAM	PF14369	zinc_ribbon_9	coord: 16..61 e-value: 7.8E-10 score: 38.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..92
None	No IPR available	PANTHER	PTHR44679:SF3	SUBFAMILY NOT NAMED	coord: 110..224 coord: 1..136
None	No IPR available	PANTHER	PTHR44679	FAMILY NOT NAMED	coord: 110..224 coord: 1..136
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 145..210

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18712	Cla015285	Watermelon (97103) v1	carwmB0345
Carg18712	Csa7G429620	Cucumber (Chinese Long) v2	carcuB0387
Carg18712	MELO3C023504	Melon (DHL92) v3.5.1	carmeB0359
Carg18712	ClCG09G003690	Watermelon (Charleston Gray)	carwcgB0346
Carg18712	CSPI07G19690	Wild cucumber (PI 183967)	carcpiB0391
Carg18712	Cucsa.049930	Cucumber (Gy14) v1	carcgyB0413
Carg18712	CmaCh17G009230	Cucurbita maxima (Rimu)	carcmaB0497
Carg18712	CmoCh17G008940	Cucurbita moschata (Rifu)	carcmoB0480
Carg18712	Lsi02G026250	Bottle gourd (USVL1VR-Ls)	carlsiB321
Carg18712	Cp4.1LG12g07140	Cucurbita pepo (Zucchini)	carcpeB0493
Carg18712	CsGy7G018010	Cucumber (Gy14) v2	carcgybB0366
Carg18712	MELO3C023504.2	Melon (DHL92) v3.6.1	carmedB0364
Carg18712	CsaV3_7G031510	Cucumber (Chinese Long) v3	carcucB0390
Carg18712	Cla97C09G165940	Watermelon (97103) v2	carwmbB0371
Carg18712	Bhi09G000477	Wax gourd	carwgoB0439

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18712	Silver-seed gourd	carcarB379
Carg18712	Silver-seed gourd	carcarB381
Carg18712	Silver-seed gourd	carcarB383
Carg18712	Cucumber (Gy14) v2	carcgybB0365
Carg18712	Cucurbita maxima (Rimu)	carcmaB0496
Carg18712	Cucurbita maxima (Rimu)	carcmaB0498
Carg18712	Cucurbita maxima (Rimu)	carcmaB0499
Carg18712	Cucurbita moschata (Rifu)	carcmoB0479
Carg18712	Cucurbita moschata (Rifu)	carcmoB0481
Carg18712	Cucurbita moschata (Rifu)	carcmoB0482
Carg18712	Cucurbita pepo (Zucchini)	carcpeB0494
Carg18712	Cucurbita pepo (Zucchini)	carcpeB0495
Carg18712	Wild cucumber (PI 183967)	carcpiB0390
Carg18712	Cucumber (Chinese Long) v2	carcuB0386
Carg18712	Cucumber (Chinese Long) v3	carcucB0389
Carg18712	Bottle gourd (USVL1VR-Ls)	carlsiB322
Carg18712	Melon (DHL92) v3.5.1	carmeB0360
Carg18712	Watermelon (Charleston Gray)	carwcgB0347
Carg18712	Watermelon (97103) v1	carwmB0346
Carg18712	Watermelon (97103) v2	carwmbB0369
Carg18712	Wax gourd	carwgoB0437