CsaV3_UNG053460 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_UNG053460
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Glucan endo-1,3-beta-glucosidase-like protein
Location	scaffold92 : 73460 .. 77367 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCTTCCATTGTTATGGATTCTGATCATCCTATTATGGTAACCCGAAGGAACAATGGAACCCGTCGGAAATCGAATCAAGTCACTGAATTGAAGCGGCATGAGGATCATATGGCTGAGCACAAACGCCTCGAGACGGTCAACAGCGATGGAGATGTTGGAGATCTGGGGGTCTTGGGGGATGAAAAAGGTGATTTCTTTTAGGGTCAGTTGAGTAGTGATGTTGAGCATTTGGAGAAGGATGGCAAAGCCATAGAAGGATTGGGCCTTCATGTCTTCAATGGCAGCTTGGAGGTCTGTTTTGTTTGAGGTTTGGGATGAAACTATTGAGGCAGCTGAAGAGACATTAATTAAGAATAAGAGAGAAACAAGAACACAAATTCTAGGAATAATTATGCCATTAGTTAGGTGTTGAATGGACCAAGAAACAAATGAGGAATTTGAAGTTATTTATTAATGAGTTTTTCAATAATGTGTTTTATGTATGTTTTTGGTTAGAGATTAGGTTGGTCATGGATCATACCCATATATATTTTCCTTATGTCAGTGTTGATCTAGAGTTTAGCTTTTTTTCATCAACTTTGTAGTCCTCTCAAACATTCAGAGTGGATGGGGTTATAATAAAATTAATTATACGTTGATACCTTCCCCTTTATCATCTTTCTTGGTTTTATCACGTTAAATCATAACTCAATCTACTCAAAACTTTGGTTTTATAATCTTTGGTTCTCTTTCTTGTAACCTTTTCATGTTTGATGAACCCTATACAAACAACTGCACCAAGTTCTTTTTAGGAGTATCTGTCAACATCCGTTTTGAAAGGAAAAAAAGAGTAATCTTACAAAAGGTTGTTTTTTATTTTTAGAATTTAGCTACTAATCAAATTTTAACTATTATTTTTATTCTTTAAGAAAATTTAAATTTCAAGTCAAGATAAGACGAGGACAAGACAAAAGTGAGCAAGAAATTAGCACATGTTTTAAAAATACTCAAACCGAAAAGAGAAAAAAATATCAAAGAAACATAACATATACGAGTTTTGATAAACTGAATTATTAAGACTCAACAATTTACGGTGAAATATGACAACAAAACGCTCCTACTCAGTTCTTCGCCCTGCTCCGATTCTACTCTAATTCAGTTTTGCTTTGCTATGCTTTTGTTTTGTTTTATCCTTGAAATTCTTTGTGTGCTTGTTCTCGTGGATTTCTAATTCTATTCTAGATCTACTTATTTGATTATTTTCATAACAAATTCAAGTTTGTGAGACTAGAACATTGAGTTTGAGGGAGAGTATTGTCCTAACTAGAGTATTTTGTGAGATATTATTTTCTTTAAGTGTTTTGTTCTTTATCTATATAATTAACTATCCTTGTACTTCTCCTAATTTATGGATGAAATAGAGAATTATTTCAGGAAAACAACTAAAGATATATTTATATATAGAGGAAAGAAAGGTAAAGATATATATTATGATATTAACTTAAAAACAAAAAGAAAGAATTGGATTGAAATGGAAGTGGAGGTGGATGCCACATCTTCTTCCAAAAGATAGATCCAAATAAAAGGTATTAATGTTAAATATCACATCTTTGGCTCTCTCATCACACACACATTAACTGATTAAGTTTATTTTCCATTGGCTATTGCATGCTATTGGGGTCAGAAAGCACTTTCCACCTTCCACCTTCCACTACTTAATTTGAATTCACTGACTTGATTCTCCCTTCCCATAACTATTCCATTCAATTAACTCCAAATTAATTAAAGTCATCTAAAGTGTTAAGCATGTGGCTAATGTTTTTTAAAAAAAAAAAACAAACAAAAAAAAAAGTATTAAGACCCCAATCTATATTTAAGAATAATAACCAACCTTTTTAATTATCCTCTAACTTAAACATATATAGCTCAACGCAGCTCAAAGTATCACTAAATTAATTTTTCCTCACATTAATTATAATGTTATATTCTAAACACACAAATGTCTTCTAATGCCTAATTAAAGTGTAGATTGTACTGTTCTAAAATAAACATGATATTATATTTGTGAAAAGAAAATATACAAATAAGATGTGATTTTGTGAAAGTAATGCATTTGGTTTGAGTAGAAAGAGTATTGAATACGCGCAGGACCAATTACCCAAAAAATAAAGCTGTTTATTATTATTATTTAACGTAAGATTGAAGGAATGAATTGTTTTGTGGATGAACATAAGAATCTAAACTTTCTCGAAGGCTGTGAAATGAAGCCCTTAAATTAAAGCTTTCTTCAAATTTGGCCACTCACATTTTCAAAACCCACACGCTGTGTATTGTTGATGAAGAAACAAATGTCTTCCTCTACTCACCTCATCATTCTCTCTCTCTCTTTCCTCCTGCTTTTTATCATAACTCCAACCATATCAGGTAATTCATCTCTTTCTAATTAATGTCGATGTGAGTTCTTGATATCGTTTCATTTTAGATATACATTATTATCGTTACCTTTATTTCTTATTCGTCAAACTATTTCATACAATAATTATTAGACATATAGTTGTTTTCCTTTGTATACAAATCCAAGATCGTTTTCTTACTAGACTTTGATTACATTATTTGTCGAACAAAAGGGACTGTCAAAATCAAAATGCTATGGTTGTTTTTCAAATTTTTTCCACTTTCATTACTTCAATAGATGAACATTTATTGTTTTTAAAAGTCTTGTTTATTTAGGTTTCCACTAAAATGATTTTGTTTCTAGCCATCTACTTTTAAAATATATGCTTGTTTTTCTCAAATTTTCAGTCACTGATTGAAGGATGTATTTGAAAACTTTTGTCAAATTCGAAAAGCAAACACTGCATATATATACTTTTTTTAGTTTTAAAATTTTGCTTTGGTTTTTCCAAAACATTAATAAAAAAAAAATGAATAGCAATTAAAACAAAGAAACTTATAGATAGAAAAGTGTTTATAAGTTAAGTTCTTTTATTAAAAAATTAAATGAAGAAACTAGGAAGTTGGTCCTTGATGGTTACAAAAGAACAATGTTGGGTGGATGCTTCTCACTTTGAGTTTCCCTATCAAACTTTTCAACTTTAAAATGAATTTTTGGTAGTGGCTAAAAAACATCAGTGGGATCCACTTAAAAATGCAACGAAAATAGAAAAGTAATTAGAACAAAACCATATTAAACATAAAATATTCGTACTTAAAACCAAATTAATCAATAAAATAAGAAACAGAAAGGTTATATATATATATGAATCCTTTGCAGAGAAGATAGTGTATTAATAAAGTTTGATTTGGGACAGGTGATGTATCGTTTGATGAGGAGTGGTGCATAGCTGATGAGCAAGTTCCAGATGACGAGTTGCAAAGAGCTCTTGATTGGGCTTGTGGAAAAGGAGGAGCTGATTGTAGAAATATTCAAATGAAGCAACCTTGTTTTTACCCAAACACTGTTAGAGATCATGCTTCCTATGCCTTCAACAGTTACTACCAAAAGTTTAAGCACAAGGGAGCCACTTGCTATTTCAATTCAGCTGCCATGGTCACTTCTCTTGATCCTAGTAAGTATAACATCAAACTACTTAACCATAAACGCTCGTTGGGATTAGGGTTAGAAAAAATTTGTCAAGAGATTACAAAGAACTCTTGACGCTATCCAAAAGGCATCATAATAATACCACTCTCGACGTTGTATATACGACCTCGAGAGTTCTCCATGATCTCCTGACGCATCATGTTGTGCGTTGGAAGATCCTCTATTTCTTTTTATTAAAAAAACACTGTCGATTACCCTACGTCACCTTTTTTATTGTTACAATTTCATTTGTTTTCTAACACTTTGATCTAAAATATTTAACAAAACTTGGTATTCTTTGGCAGGTCATGGTTCATGCAAGTTTGAGTATGTTCCTTGA

mRNA sequence

ATGGCCTCTTCCATTGTTATGGATTCTGATCATCCTATTATGGTAACCCGAAGGAACAATGGAACCCGTCGGAAATCGAATCAAGTCACTGAATTGAAGCGGCATGAGGATCATATGGCTGAGCACAAACGCCTCGAGACGGTCAACAGCGATGGAGATGTTGGAGATCTGGGGGTCTTGGGGGATGAAAAAGGTGATGTATCGTTTGATGAGGAGTGGTGCATAGCTGATGAGCAAGTTCCAGATGACGAGTTGCAAAGAGCTCTTGATTGGGCTTGTGGAAAAGGAGGAGCTGATTGTAGAAATATTCAAATGAAGCAACCTTGTTTTTACCCAAACACTGTTAGAGATCATGCTTCCTATGCCTTCAACAGTTACTACCAAAAGTTTAAGCACAAGGGAGCCACTTGCTATTTCAATTCAGCTGCCATGGTCACTTCTCTTGATCCTAGTCATGGTTCATGCAAGTTTGAGTATGTTCCTTGA

Coding sequence (CDS)

ATGGCCTCTTCCATTGTTATGGATTCTGATCATCCTATTATGGTAACCCGAAGGAACAATGGAACCCGTCGGAAATCGAATCAAGTCACTGAATTGAAGCGGCATGAGGATCATATGGCTGAGCACAAACGCCTCGAGACGGTCAACAGCGATGGAGATGTTGGAGATCTGGGGGTCTTGGGGGATGAAAAAGGTGATGTATCGTTTGATGAGGAGTGGTGCATAGCTGATGAGCAAGTTCCAGATGACGAGTTGCAAAGAGCTCTTGATTGGGCTTGTGGAAAAGGAGGAGCTGATTGTAGAAATATTCAAATGAAGCAACCTTGTTTTTACCCAAACACTGTTAGAGATCATGCTTCCTATGCCTTCAACAGTTACTACCAAAAGTTTAAGCACAAGGGAGCCACTTGCTATTTCAATTCAGCTGCCATGGTCACTTCTCTTGATCCTAGTCATGGTTCATGCAAGTTTGAGTATGTTCCTTGA

Protein sequence

MASSIVMDSDHPIMVTRRNNGTRRKSNQVTELKRHEDHMAEHKRLETVNSDGDVGDLGVLGDEKGDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP

Homology

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BLAST of CsaV3_UNG053460 vs. NCBI nr
Match: KGN65032.1 (hypothetical protein Csa_1G181450 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 5.2e-53
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 65  GDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFN 124
           GDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFN
Sbjct: 26  GDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFN 85

Query: 125 SYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 162
           SYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP
Sbjct: 86  SYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 122

[Close]

BLAST of CsaV3_UNG053460 vs. NCBI nr
Match: XP_011654946.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 5.2e-53
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 65  GDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFN 124
           GDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFN
Sbjct: 30  GDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFN 89

Query: 125 SYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 162
           SYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP
Sbjct: 90  SYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 126

[Close]

BLAST of CsaV3_UNG053460 vs. NCBI nr
Match: XP_008463607.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucumis melo])

HSP 1 Score: 203.4 bits (516), Expect = 6.0e-49
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 70  DEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQK 129
           DEEWCIADEQVPDDELQRALDWACGKGGADC NIQMKQPCFYPNT+RDHASYAFNSYYQK
Sbjct: 35  DEEWCIADEQVPDDELQRALDWACGKGGADCTNIQMKQPCFYPNTLRDHASYAFNSYYQK 94

Query: 130 FKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 162
           FKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP
Sbjct: 95  FKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 126

[Close]

BLAST of CsaV3_UNG053460 vs. NCBI nr
Match: XP_022142612.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Momordica charantia])

HSP 1 Score: 198.7 bits (504), Expect = 1.5e-47
Identity = 87/91 (95.60%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 71  EEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKF 130
           EEWCIADEQVPDDELQRALDWACGKGGADCR IQ+KQPCFYPNTVRDHASYAFN+YYQKF
Sbjct: 30  EEWCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKF 89

Query: 131 KHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 162
           KHKGATCYFNSAAMVT+LDPSHGSCKFEYVP
Sbjct: 90  KHKGATCYFNSAAMVTALDPSHGSCKFEYVP 120

[Close]

BLAST of CsaV3_UNG053460 vs. NCBI nr
Match: XP_022925351.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita moschata])

HSP 1 Score: 193.0 bits (489), Expect = 8.1e-46
Identity = 84/91 (92.31%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 71  EEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKF 130
           EEWCIADEQVPDDELQRALDWACGKGGADC +IQ+K+PCFYPNTVRDHASYAFNSYYQKF
Sbjct: 31  EEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKF 90

Query: 131 KHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 162
           KHKGA+C+FNSAAMVT+LDPSHGSCKFEYVP
Sbjct: 91  KHKGASCFFNSAAMVTALDPSHGSCKFEYVP 121

[Close]

BLAST of CsaV3_UNG053460 vs. TAIR10
Match: AT5G35740.1 (Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 160.6 bits (405), Expect = 8.0e-40
Identity = 68/92 (73.91%), Postives = 79/92 (85.87%), Query Frame = 0


Query: 71  EEWCIADEQVPDDELQRALDWACGKGGADCRNIQMK-QPCFYPNTVRDHASYAFNSYYQK 130
           E+WCIADEQ PDDELQ ALDWACGKGGADC  +Q + QPCF PNT+RDHAS+AFNSYYQ 
Sbjct: 28  EQWCIADEQTPDDELQAALDWACGKGGADCSKMQQENQPCFLPNTIRDHASFAFNSYYQT 87

Query: 131 FKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 162
           +K+KG +CYF  AAM+T LDPSHGSC++EY P
Sbjct: 88  YKNKGGSCYFKGAAMITELDPSHGSCQYEYNP 119

[Close]

BLAST of CsaV3_UNG053460 vs. TAIR10
Match: AT2G04910.1 (Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 119.8 bits (299), Expect = 1.6e-27
Identity = 48/80 (60.00%), Postives = 60/80 (75.00%), Query Frame = 0


Query: 72  EWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFK 131
           +WC+AD Q+PD+ +Q A+DWAC  GGADC  IQ  QPCF PNTV+DHAS  FN+YYQ++K
Sbjct: 14  QWCVADGQIPDNVIQAAVDWACQTGGADCSTIQPNQPCFLPNTVKDHASVVFNNYYQRYK 73

Query: 132 HKGATCYFNSAAMVTSLDPS 152
             G +C FNS A +T  DPS
Sbjct: 74  RNGGSCNFNSTAFITQTDPS 93

[Close]

BLAST of CsaV3_UNG053460 vs. TAIR10
Match: AT1G29380.1 (Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 106.3 bits (264), Expect = 1.8e-23
Identity = 51/87 (58.62%), Postives = 59/87 (67.82%), Query Frame = 0


Query: 72  EWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFK 131
           +WCIA        LQ ALD+ACG GGADC  IQ    C+ PNT+RDHAS+AFNSYYQ  K
Sbjct: 147 QWCIAKANASPTSLQVALDYACGYGGADCGQIQQGAACYEPNTIRDHASFAFNSYYQ--K 206

Query: 132 HKGA-TCYFNSAAMVTSLDPSHGSCKF 158
           H G+ +C F  AA +TS DPS GSC F
Sbjct: 207 HPGSDSCNFGGAAQLTSTDPSKGSCHF 231

[Close]

BLAST of CsaV3_UNG053460 vs. TAIR10
Match: AT4G29360.1 (O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 105.5 bits (262), Expect = 3.1e-23
Identity = 46/89 (51.69%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 73  WCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKH 132
           WCIA  Q    ELQ ALDWACG G  DC  +Q  QPCF P+TV  HASYAFN+YYQ+   
Sbjct: 391 WCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGA 450

Query: 133 KGATCYFNSAAMVTSLDPSHGSCKFEYVP 162
               C FN A++    DPS+G+C +   P
Sbjct: 451 SSIDCSFNGASVEVDKDPSYGNCLYMIAP 479

[Close]

BLAST of CsaV3_UNG053460 vs. TAIR10
Match: AT4G26830.1 (O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 104.0 bits (258), Expect = 8.9e-23
Identity = 43/85 (50.59%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 73  WCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKH 132
           WC+++ +V  ++LQ ALD+ACG+GGADCR IQ    C++P ++  HASYAFNSYYQK   
Sbjct: 367 WCVSNGEVAKEKLQEALDYACGEGGADCRPIQPGATCYHPESLEAHASYAFNSYYQKNSR 426

Query: 133 KGATCYFNSAAMVTSLDPSHGSCKF 158
           +  TC+F  AA V +  P +G C+F
Sbjct: 427 RVGTCFFGGAAHVVTQPPRYGKCEF 451

[Close]

BLAST of CsaV3_UNG053460 vs. Swiss-Prot
Match: sp|Q8VYE5|E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.5e-22
Identity = 46/89 (51.69%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 73  WCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKH 132
           WCIA  Q    ELQ ALDWACG G  DC  +Q  QPCF P+TV  HASYAFN+YYQ+   
Sbjct: 391 WCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGA 450

Query: 133 KGATCYFNSAAMVTSLDPSHGSCKFEYVP 162
               C FN A++    DPS+G+C +   P
Sbjct: 451 SSIDCSFNGASVEVDKDPSYGNCLYMIAP 479

[Close]

BLAST of CsaV3_UNG053460 vs. Swiss-Prot
Match: sp|O65399|E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3)

HSP 1 Score: 100.9 bits (250), Expect = 1.4e-20
Identity = 45/88 (51.14%), Postives = 58/88 (65.91%), Query Frame = 0


Query: 70  DEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQK 129
           ++ +CIA + V    LQ ALDWACG G ++C  IQ  + C+ PN V+ HAS+AFNSYYQK
Sbjct: 378 NQTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQK 437

Query: 130 FKHKGATCYFNSAAMVTSLDPSHGSCKF 158
                 +C F   AM+T+ DPSHGSC F
Sbjct: 438 EGRASGSCDFKGVAMITTTDPSHGSCIF 465

[Close]

BLAST of CsaV3_UNG053460 vs. Swiss-Prot
Match: sp|Q94CD8|E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.0e-20
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 0


Query: 61  GDEKGDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHAS 120
           G     ++    +C+A     DD+L   L+WACG+G A+C  IQ  QPC+ PN V+ HAS
Sbjct: 350 GSSSAALNGSSMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHAS 409

Query: 121 YAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKF 158
           +AFN YYQK K  G TC F+  A+ T+ DPS+ +C +
Sbjct: 410 FAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAY 446

[Close]

BLAST of CsaV3_UNG053460 vs. Swiss-Prot
Match: sp|Q9M2K6|PDCB5_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5 PE=2 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 4.4e-19
Identity = 44/93 (47.31%), Postives = 57/93 (61.29%), Query Frame = 0


Query: 65  GDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFN 124
           G V   E WC+A     D  LQ A++WACG+GGADC  IQ   PC  P  V+  AS+ FN
Sbjct: 33  GQVIQVELWCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFVFN 92

Query: 125 SYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKF 158
           +YY K   +   C FN+ A +TSL+PS G+CK+
Sbjct: 93  NYYLKNGEEDEACNFNNNAALTSLNPSQGTCKY 125

[Close]

BLAST of CsaV3_UNG053460 vs. Swiss-Prot
Match: sp|Q9FJU9|E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 8.3e-18
Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 73  WCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKH 132
           WCIA  +  + +L+ ALDWACG G  DC  IQ  QPCF P+T+  HAS+ FNSY+Q+ + 
Sbjct: 369 WCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQQNRA 428

Query: 133 KGATCYFNSAAMVTSLDPSHGSC 156
               C F  A +  + DPS+  C
Sbjct: 429 TDVACSFGGAGVKVNKDPSYDKC 451

[Close]

BLAST of CsaV3_UNG053460 vs. TrEMBL
Match: tr|A0A0A0LW57|A0A0A0LW57_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181450 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.4e-53
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 65  GDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFN 124
           GDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFN
Sbjct: 26  GDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFN 85

Query: 125 SYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 162
           SYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP
Sbjct: 86  SYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 122

[Close]

BLAST of CsaV3_UNG053460 vs. TrEMBL
Match: tr|A0A1S3CJN7|A0A1S3CJN7_CUCME (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucumis melo OX=3656 GN=LOC103501716 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.9e-49
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 70  DEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQK 129
           DEEWCIADEQVPDDELQRALDWACGKGGADC NIQMKQPCFYPNT+RDHASYAFNSYYQK
Sbjct: 35  DEEWCIADEQVPDDELQRALDWACGKGGADCTNIQMKQPCFYPNTLRDHASYAFNSYYQK 94

Query: 130 FKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 162
           FKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP
Sbjct: 95  FKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 126

[Close]

BLAST of CsaV3_UNG053460 vs. TrEMBL
Match: tr|A9P8Y9|A9P8Y9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G016800v3 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.0e-41
Identity = 74/91 (81.32%), Postives = 82/91 (90.11%), Query Frame = 0


Query: 71  EEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKF 130
           EEWCIADEQ PDDELQRA+DWACGKGGADC  IQM QPC+ PNT+RDHASYAFN YYQKF
Sbjct: 29  EEWCIADEQTPDDELQRAMDWACGKGGADCSKIQMNQPCYMPNTIRDHASYAFNDYYQKF 88

Query: 131 KHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 162
           KHKGATCYFN+AA++T LDPS  SCKF+Y+P
Sbjct: 89  KHKGATCYFNAAALITDLDPSQHSCKFDYLP 119

[Close]

BLAST of CsaV3_UNG053460 vs. TrEMBL
Match: tr|A0A1U7ZG57|A0A1U7ZG57_NELNU (glucan endo-1,3-beta-glucosidase 4-like OS=Nelumbo nucifera OX=4432 GN=LOC104594218 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.6e-40
Identity = 74/103 (71.84%), Postives = 87/103 (84.47%), Query Frame = 0


Query: 59  VLGDEKGDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDH 118
           V+   K    F E+WCIADEQ PD+ELQ+ALDWACGKGGADCR IQ+ +PC+ PNTV+DH
Sbjct: 16  VITSHKSGAQF-EQWCIADEQTPDEELQKALDWACGKGGADCRKIQLNEPCYLPNTVKDH 75

Query: 119 ASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 162
           ASYAFN+YYQKFK+KG TCYFN AAM+T LDPSH SC+FEY+P
Sbjct: 76  ASYAFNNYYQKFKNKGGTCYFNGAAMITELDPSHKSCQFEYIP 117

[Close]

BLAST of CsaV3_UNG053460 vs. TrEMBL
Match: tr|A0A061GP73|A0A061GP73_THECC (Carbohydrate-binding X8 domain superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_030398 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.6e-40
Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 0


Query: 63  EKGDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYA 122
           +K D  F  EWCIADEQ PDDELQ+ALDWACGKGGADC  IQ+ QPC+ PNT+RDHASYA
Sbjct: 39  QKTDAQF-REWCIADEQTPDDELQKALDWACGKGGADCSKIQVNQPCYLPNTIRDHASYA 98

Query: 123 FNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 162
           FN+YYQKFK+KGATCYFNSAAM+T LDPSH SCKF  VP
Sbjct: 99  FNNYYQKFKNKGATCYFNSAAMITDLDPSHHSCKFVSVP 136

The following BLAST results are available for this feature:

BLAST of CsaV3_UNG053460 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65032.1	5.2e-53	100.00	hypothetical protein Csa_1G181450 [Cucumis sativus]	[more]
XP_011654946.1	5.2e-53	100.00	PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucumis sativus]	[more]
XP_008463607.1	6.0e-49	97.83	PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucumis melo]	[more]
XP_022142612.1	1.5e-47	95.60	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Momordica charantia]	[more]
XP_022925351.1	8.1e-46	92.31	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita moschata]	[more]

BLAST of CsaV3_UNG053460 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G35740.1	8.0e-40	73.91	Carbohydrate-binding X8 domain superfamily protein	[more]
AT2G04910.1	1.6e-27	60.00	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G29380.1	1.8e-23	58.62	Carbohydrate-binding X8 domain superfamily protein	[more]
AT4G29360.1	3.1e-23	51.69	O-Glycosyl hydrolases family 17 protein	[more]
AT4G26830.1	8.9e-23	50.59	O-Glycosyl hydrolases family 17 protein	[more]

BLAST of CsaV3_UNG053460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8VYE5\|E1312_ARATH	5.5e-22	51.69	Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360...	[more]
sp\|O65399\|E131_ARATH	1.4e-20	51.14	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 ...	[more]
sp\|Q94CD8\|E134_ARATH	4.0e-20	44.33	Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 ...	[more]
sp\|Q9M2K6\|PDCB5_ARATH	4.4e-19	47.31	PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5...	[more]
sp\|Q9FJU9\|E1313_ARATH	8.3e-18	45.78	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590...	[more]

BLAST of CsaV3_UNG053460 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LW57\|A0A0A0LW57_CUCSA	3.4e-53	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181450 PE=4 SV=1	[more]
tr\|A0A1S3CJN7\|A0A1S3CJN7_CUCME	3.9e-49	97.83	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
tr\|A9P8Y9\|A9P8Y9_POPTR	3.0e-41	81.32	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G016800v3 PE=...	[more]
tr\|A0A1U7ZG57\|A0A1U7ZG57_NELNU	2.6e-40	71.84	glucan endo-1,3-beta-glucosidase 4-like OS=Nelumbo nucifera OX=4432 GN=LOC104594...	[more]
tr\|A0A061GP73\|A0A061GP73_THECC	2.6e-40	77.78	Carbohydrate-binding X8 domain superfamily protein OS=Theobroma cacao OX=3641 GN...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012946	X8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0018106	peptidyl-histidine phosphorylation
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009365	protein histidine kinase complex
cellular_component	GO:0046658	anchored component of plasma membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0004673	protein histidine kinase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0030247	polysaccharide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_UNG053460.1	CsaV3_UNG053460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 72..157 e-value: 1.3E-46 score: 170.8
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 73..144 e-value: 5.5E-21 score: 74.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	PANTHER	PTHR32227	FAMILY NOT NAMED	coord: 70..158
None	No IPR available	PANTHER	PTHR32227:SF98	GB\|AAD30228.1	coord: 70..158

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_UNG053460	CSPI01G15730	Wild cucumber (PI 183967)	cpicucB060
CsaV3_UNG053460	Cucsa.180520	Cucumber (Gy14) v1	cgycucB291
CsaV3_UNG053460	CmaCh18G006030	Cucurbita maxima (Rimu)	cmacucB0510
CsaV3_UNG053460	CmoCh18G005900	Cucurbita moschata (Rifu)	cmocucB0496
CsaV3_UNG053460	Cp4.1LG20g06560	Cucurbita pepo (Zucchini)	cpecucB0655
CsaV3_UNG053460	CsGy1G015440	Cucumber (Gy14) v2	cgybcucB051
CsaV3_UNG053460	Carg25610	Silver-seed gourd	carcucB0057
CsaV3_UNG053460	Cla009048	Watermelon (97103) v1	cucwmB575
CsaV3_UNG053460	MELO3C025538	Melon (DHL92) v3.5.1	cucmeB527
CsaV3_UNG053460	ClCG01G010670	Watermelon (Charleston Gray)	cucwcgB534
CsaV3_UNG053460	Lsi02G011280	Bottle gourd (USVL1VR-Ls)	cuclsiB518
CsaV3_UNG053460	MELO3C025539.2	Melon (DHL92) v3.6.1	cucmedB514
CsaV3_UNG053460	Cla97C01G010440	Watermelon (97103) v2	cucwmbB533
CsaV3_UNG053460	Bhi08G000629	Wax gourd	cucwgoB671

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_UNG053460	CsaV3_1G017020	Cucumber (Chinese Long) v3	cuccucB056

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_UNG053460	Cucurbita maxima (Rimu)	cmacucB0268
CsaV3_UNG053460	Cucurbita moschata (Rifu)	cmocucB0258
CsaV3_UNG053460	Cucurbita pepo (Zucchini)	cpecucB0056
CsaV3_UNG053460	Silver-seed gourd	carcucB1085