CmaCh18G006030 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G006030
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Carbohydrate-binding X8 domain superfamily protein
Location	Cma_Chr18 : 5363462 .. 5365099 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAACAAAACACTACAATGTCTTCTCGTTCTACTCGGCTCACCATTCTCCATCTGTCTGTGCTGCTCGCTTTCCTCGTAGCTCCACGAAGATCAGGTACTTAGCTTCTTGTTTGTCTTGTTTTTATTAGGAATCACAACTCTCCACAACGGTATGGTGTTGTCCACTTTGAGTATAAGTTCTCGTGGCTTTGTTTTGGTCTGGGCTTCTCCAAAAAGCCTCATACTAATGGAGAGTATTTCTTGACCGTCTTTTTGTTATGAAAGAAAAATGGGTTCGATTTTTTTTTTTTCTTTCCTGTGTTGGGTTATGAAAGAGGGGCAATTTGAGGAGTGGTGCATAGCTGATGAGCAAGTGCCGGATGATGAGCTGCAAAGAGCTCTTGATTGGGCTTGTGGGAAAGGAGGAGCGAATTGTGGTGATATTCAAGTGAAGCGTCCTTGTTTTTACCCAGACACTGTTAGGGATCATGCTTCTTATGCTTTTAATAGTTACTATCAAAAGTTTAAGCATAAGGGTGCCTCTTGCTTCTTCAATTCGGCTGCCATGGTCACCGCTCTCGATCCTAGTAAGTGTTCTTAATCTAACCCCATCTTCTTGATCTTCTCGTCTTGTACTTCATGGTTACTATATAGTTTTTGTAATGGTACAAGCTCATCGCTAGTAGATATTGTTCTTTTTGAGCTTTTCTGTATAGTTTTTGTAACAGTACAAGCTCATCGTTAGTAGATATTTTTCTCTTTGAGCTTTCCTGTATTGTTTTTGTAACAGTACAAGCTCATCGCTAGTAGATATTTTTCTCTTTGGGGTTTTCTTTTCGGGTTTTCTCTCAGGTTTTTAAAATGTGTCTACTAGGGAGAGGTTTCCACATCTTTATAGAGAATGTTTCATTCTTCTCCTCAACTAATGTGGGATCTTGCAATCTCCTACGATGTGGGATCTCACAATCCACCATCGAGAGGTTTCTACACCCTTGTAAAAAATATTTTGCTCCCCTCTTGAATTGACGTGTGATCTCACAATCCAATCCTCAGAGGTTTCCACACCCTTATAAAAAATGATTAGTTCCCCTCTTCAACTGATGTCGAATCTCACAATCCATCCTAACAGGTTTTTACACTCTTATAAAGAATATTTCATTCCTCTCTCCAATTGACGTGGGATCTCCTAATCTACCCTCGAGAAGTTTCCACACCCTTATAAAAAATGTTTCGTTCCCCCTCTCCAACCGATGTGGGATCTCACATTTCACCCCCTTCAAAGTCCAGAGTTCTCGTTGAAACTCGTTCCTTTTTCCAATCAACGTGGACCTCGCCGTTTTCTTGGTCAACTTGCTTATACATTTTCCTTAAAACTAATCTTCCTTTCCTTGGCAGGTCATGGTTCATGCAAGTTTGAGTATGTACCTTGAAGAAGGGCATGGCTTAGTCATCAAAGAGGCTTCCTAACTTTGAGTATTCAACCGTTTTTTATATGGATCAAGATATCTCAATCATATAATATGAACTACGAAGAAAATAAGTTTTACTTATTTTTAGATGGTTACAAATTTTGAGTGAATGATAGTTTAGAATTATGGTGTTTCGTTACGGTGTTTTATGACTTTTTTGTTACTTGATTTGCAAAAATTCAAGTGTAC

mRNA sequence

AGAACAAAACACTACAATGTCTTCTCGTTCTACTCGGCTCACCATTCTCCATCTGTCTGTGCTGCTCGCTTTCCTCGTAGCTCCACGAAGATCAGAGGGGCAATTTGAGGAGTGGTGCATAGCTGATGAGCAAGTGCCGGATGATGAGCTGCAAAGAGCTCTTGATTGGGCTTGTGGGAAAGGAGGAGCGAATTGTGGTGATATTCAAGTGAAGCGTCCTTGTTTTTACCCAGACACTGTTAGGGATCATGCTTCTTATGCTTTTAATAGTTACTATCAAAAGTTTAAGCATAAGGGTGCCTCTTGCTTCTTCAATTCGGCTGCCATGGTCACCGCTCTCGATCCTAGTCATGGTTCATGCAAGTTTGAGTATGTACCTTGAAGAAGGGCATGGCTTAGTCATCAAAGAGGCTTCCTAACTTTGAGTATTCAACCGTTTTTTATATGGATCAAGATATCTCAATCATATAATATGAACTACGAAGAAAATAAGTTTTACTTATTTTTAGATGGTTACAAATTTTGAGTGAATGATAGTTTAGAATTATGGTGTTTCGTTACGGTGTTTTATGACTTTTTTGTTACTTGATTTGCAAAAATTCAAGTGTAC

Coding sequence (CDS)

ATGTCTTCTCGTTCTACTCGGCTCACCATTCTCCATCTGTCTGTGCTGCTCGCTTTCCTCGTAGCTCCACGAAGATCAGAGGGGCAATTTGAGGAGTGGTGCATAGCTGATGAGCAAGTGCCGGATGATGAGCTGCAAAGAGCTCTTGATTGGGCTTGTGGGAAAGGAGGAGCGAATTGTGGTGATATTCAAGTGAAGCGTCCTTGTTTTTACCCAGACACTGTTAGGGATCATGCTTCTTATGCTTTTAATAGTTACTATCAAAAGTTTAAGCATAAGGGTGCCTCTTGCTTCTTCAATTCGGCTGCCATGGTCACCGCTCTCGATCCTAGTCATGGTTCATGCAAGTTTGAGTATGTACCTTGA

Protein sequence

MSSRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP

Homology

[Close]

BLAST of CmaCh18G006030 vs. Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.1e-22
Identity = 46/94 (48.94%), Postives = 58/94 (61.70%), Query Frame = 1


Query: 28  GQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQVKRPCFYPDTVRDHASYAFNSYY 87
           G  ++WCIA  Q    ELQ ALDWACG G  +C  +Q  +PCF PDTV  HASYAFN+YY
Sbjct: 386 GGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYY 445

Query: 88  QKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP 122
           Q+       C FN A++    DPS+G+C +   P
Sbjct: 446 QQSGASSIDCSFNGASVEVDKDPSYGNCLYMIAP 479

[Close]

BLAST of CmaCh18G006030 vs. Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=3)

HSP 1 Score: 104.8 bits (260), Expect = 6.9e-22
Identity = 53/113 (46.90%), Postives = 68/113 (60.18%), Query Frame = 1


Query: 5   STRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQ 64
           ST + +LH+S    FL     ++   + +CIA + V    LQ ALDWACG G +NC +IQ
Sbjct: 357 STPVYLLHVSGSGTFLA----NDTTNQTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQ 416

Query: 65  VKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKF 118
               C+ P+ V+ HAS+AFNSYYQK      SC F   AM+T  DPSHGSC F
Sbjct: 417 PGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIF 465

[Close]

BLAST of CmaCh18G006030 vs. Swiss-Prot
Match: PDCB5_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana GN=PDCB5 PE=1 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 5.0e-20
Identity = 47/114 (41.23%), Postives = 69/114 (60.53%), Query Frame = 1


Query: 7   RLTILHLSVLLAFLVAPRRSEGQF---EEWCIADEQVPDDELQRALDWACGKGGANCGDI 66
           RL+IL  +  +  ++   +  GQ    E WC+A     D  LQ A++WACG+GGA+CG I
Sbjct: 12  RLSILAATAAMLMVITTAQIGGQVIQVELWCVAKNNAEDSSLQTAIEWACGQGGADCGPI 71

Query: 67  QVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKF 118
           Q   PC  P  V+  AS+ FN+YY K   +  +C FN+ A +T+L+PS G+CK+
Sbjct: 72  QQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKY 125

[Close]

BLAST of CmaCh18G006030 vs. Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-19
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 1


Query: 33  WCIADEQVPDDELQRALDWACGKGGANCGDIQVKRPCFYPDTVRDHASYAFNSYYQKFKH 92
           +C+A     DD+L   L+WACG+G ANC  IQ  +PC+ P+ V+ HAS+AFN YYQK K 
Sbjct: 362 FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKS 421

Query: 93  KGASCFFNSAAMVTALDPSHGSCKF 118
            G +C F+  A+ T  DPS+ +C +
Sbjct: 422 AGGTCDFDGTAITTTRDPSYRTCAY 446

[Close]

BLAST of CmaCh18G006030 vs. Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.6e-18
Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = 1


Query: 26  SEGQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQVKRPCFYPDTVRDHASYAFNS 85
           S G    WCIA  +  + +L+ ALDWACG G  +C  IQ  +PCF PDT+  HAS+ FNS
Sbjct: 362 SSGSSNSWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNS 421

Query: 86  YYQKFKHKGASCFFNSAAMVTALDPSHGSC 116
           Y+Q+ +    +C F  A +    DPS+  C
Sbjct: 422 YFQQNRATDVACSFGGAGVKVNKDPSYDKC 451

[Close]

BLAST of CmaCh18G006030 vs. TrEMBL
Match: A0A0A0LW57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181450 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 3.6e-49
Identity = 96/121 (79.34%), Postives = 107/121 (88.43%), Query Frame = 1


Query: 3   SRSTRLTILHLSVLLAFLVAPRRS-EGQF-EEWCIADEQVPDDELQRALDWACGKGGANC 62
           S ST L IL LS LL F++ P  S +  F EEWCIADEQVPDDELQRALDWACGKGGA+C
Sbjct: 2   SSSTHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGADC 61

Query: 63  GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 122
            +IQ+K+PCFYP+TVRDHASYAFNSYYQKFKHKGA+C+FNSAAMVT+LDPSHGSCKFEYV
Sbjct: 62  RNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYV 121

[Close]

BLAST of CmaCh18G006030 vs. TrEMBL
Match: A9P8Y9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s01780g PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.5e-42
Identity = 80/121 (66.12%), Postives = 98/121 (80.99%), Query Frame = 1


Query: 1   MSSRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANC 60
           MS    R+ +L LS     L   ++SEGQFEEWCIADEQ PDDELQRA+DWACGKGGA+C
Sbjct: 2   MSPNFPRILLLALSFHALML---QKSEGQFEEWCIADEQTPDDELQRAMDWACGKGGADC 61

Query: 61  GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 120
             IQ+ +PC+ P+T+RDHASYAFN YYQKFKHKGA+C+FN+AA++T LDPS  SCKF+Y+
Sbjct: 62  SKIQMNQPCYMPNTIRDHASYAFNDYYQKFKHKGATCYFNAAALITDLDPSQHSCKFDYL 119

Query: 121 P 122
           P
Sbjct: 122 P 119

[Close]

BLAST of CmaCh18G006030 vs. TrEMBL
Match: V4WA31_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017213mg PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 7.2e-42
Identity = 78/112 (69.64%), Postives = 96/112 (85.71%), Query Frame = 1


Query: 13  LSVLLAFLVAP---RRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQVKRPC 72
           LS+LLAFL+A    + S+G+F EWCIAD Q PDDELQ ALDWACGKGGA+C  +Q K+PC
Sbjct: 6   LSILLAFLIAISTLQTSDGEFMEWCIADGQTPDDELQMALDWACGKGGADCNKLQAKQPC 65

Query: 73  FYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP 122
           ++P+T+RDHASYAFN YYQKFKH+GA+C+F++AAM+T LDPSH SCKFEY P
Sbjct: 66  YFPNTLRDHASYAFNDYYQKFKHQGATCYFHAAAMITDLDPSHRSCKFEYRP 117

[Close]

BLAST of CmaCh18G006030 vs. TrEMBL
Match: G7JMV2_MEDTR (Glucan endo-1,3-beta-glucosidase-like protein OS=Medicago truncatula GN=MTR_4g133730 PE=4 SV=2)

HSP 1 Score: 175.3 bits (443), Expect = 4.7e-41
Identity = 78/121 (64.46%), Postives = 95/121 (78.51%), Query Frame = 1


Query: 1   MSSRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANC 60
           MSS   ++ I  L V L+F     ++ GQF EWCIADEQ PDD+LQRA+DWAC  GGANC
Sbjct: 1   MSSSMVKILIAMLLVTLSF-----QASGQFLEWCIADEQTPDDDLQRAMDWACHVGGANC 60

Query: 61  GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 120
            +IQV  PC+ P+T++DHASY FN+YYQKFKHKG SC+FNSAA+ + LDPSHGSCKFEY+
Sbjct: 61  SNIQVNHPCYLPNTMKDHASYVFNNYYQKFKHKGGSCYFNSAAITSDLDPSHGSCKFEYI 116

Query: 121 P 122
           P
Sbjct: 121 P 116

[Close]

BLAST of CmaCh18G006030 vs. TrEMBL
Match: B9IAQ9_POPTR (Glycosyl hydrolase family protein OS=Populus trichocarpa GN=POPTR_0014s16250g PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 6.1e-41
Identity = 73/106 (68.87%), Postives = 90/106 (84.91%), Query Frame = 1


Query: 16  LLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQVKRPCFYPDTV 75
           LL   +APR+S+G+ E+WCIADEQ PDDELQ ALDWACGKGGA+C  IQV +PC+ P+TV
Sbjct: 12  LLILSIAPRKSDGELEQWCIADEQTPDDELQIALDWACGKGGADCSKIQVNQPCYLPNTV 71

Query: 76  RDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP 122
           RDHASYAFN+Y+QKFKHKG SC+F  AA++T LDPSH SC++E+ P
Sbjct: 72  RDHASYAFNNYFQKFKHKGGSCYFKGAAIITELDPSHSSCQYEFHP 117

[Close]

BLAST of CmaCh18G006030 vs. TAIR10
Match: AT5G35740.1 (AT5G35740.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 168.3 bits (425), Expect = 2.9e-42
Identity = 75/118 (63.56%), Postives = 94/118 (79.66%), Query Frame = 1


Query: 5   STRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQ 64
           ST L  + L +L+  +  PRRSE + E+WCIADEQ PDDELQ ALDWACGKGGA+C  +Q
Sbjct: 2   STFLIRILLPLLIIAMTLPRRSEAESEQWCIADEQTPDDELQAALDWACGKGGADCSKMQ 61

Query: 65  VK-RPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP 122
            + +PCF P+T+RDHAS+AFNSYYQ +K+KG SC+F  AAM+T LDPSHGSC++EY P
Sbjct: 62  QENQPCFLPNTIRDHASFAFNSYYQTYKNKGGSCYFKGAAMITELDPSHGSCQYEYNP 119

[Close]

BLAST of CmaCh18G006030 vs. TAIR10
Match: AT2G04910.1 (AT2G04910.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 118.6 bits (296), Expect = 2.6e-27
Identity = 47/86 (54.65%), Postives = 64/86 (74.42%), Query Frame = 1


Query: 26  SEGQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQVKRPCFYPDTVRDHASYAFNS 85
           ++ +F +WC+AD Q+PD+ +Q A+DWAC  GGA+C  IQ  +PCF P+TV+DHAS  FN+
Sbjct: 8   AKAEFGQWCVADGQIPDNVIQAAVDWACQTGGADCSTIQPNQPCFLPNTVKDHASVVFNN 67

Query: 86  YYQKFKHKGASCFFNSAAMVTALDPS 112
           YYQ++K  G SC FNS A +T  DPS
Sbjct: 68  YYQRYKRNGGSCNFNSTAFITQTDPS 93

[Close]

BLAST of CmaCh18G006030 vs. TAIR10
Match: AT5G67460.1 (AT5G67460.1 O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 105.5 bits (262), Expect = 2.3e-23
Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 1


Query: 33  WCIADEQVPDDELQRALDWACGKGGANCGDIQVKRPCFYPDTVRDHASYAFNSYYQKFKH 92
           WC+A   V  + LQ++LD+ACG+GGANC +I+    C+YPDTV  HASYAFNSY+QK K 
Sbjct: 293 WCVAKPSVAAETLQQSLDFACGQGGANCDEIKPHGICYYPDTVMAHASYAFNSYWQKTKR 352

Query: 93  KGASCFFNSAAMVTALDPSHGSCKF 118
            G +C F   AM+   DPS+  C+F
Sbjct: 353 NGGTCSFGGTAMLITTDPSYQHCRF 377

[Close]

BLAST of CmaCh18G006030 vs. TAIR10
Match: AT4G29360.1 (AT4G29360.1 O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 105.5 bits (262), Expect = 2.3e-23
Identity = 46/94 (48.94%), Postives = 58/94 (61.70%), Query Frame = 1


Query: 28  GQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQVKRPCFYPDTVRDHASYAFNSYY 87
           G  ++WCIA  Q    ELQ ALDWACG G  +C  +Q  +PCF PDTV  HASYAFN+YY
Sbjct: 386 GGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYY 445

Query: 88  QKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP 122
           Q+       C FN A++    DPS+G+C +   P
Sbjct: 446 QQSGASSIDCSFNGASVEVDKDPSYGNCLYMIAP 479

[Close]

BLAST of CmaCh18G006030 vs. TAIR10
Match: AT1G11820.2 (AT1G11820.2 O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 104.8 bits (260), Expect = 3.9e-23
Identity = 53/113 (46.90%), Postives = 68/113 (60.18%), Query Frame = 1


Query: 5   STRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQ 64
           ST + +LH+S    FL     ++   + +CIA + V    LQ ALDWACG G +NC +IQ
Sbjct: 357 STPVYLLHVSGSGTFLA----NDTTNQTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQ 416

Query: 65  VKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKF 118
               C+ P+ V+ HAS+AFNSYYQK      SC F   AM+T  DPSHGSC F
Sbjct: 417 PGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIF 465

[Close]

BLAST of CmaCh18G006030 vs. NCBI nr
Match: gi|778659739|ref|XP_011654946.1| (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 5.1e-49
Identity = 96/121 (79.34%), Postives = 107/121 (88.43%), Query Frame = 1


Query: 3   SRSTRLTILHLSVLLAFLVAPRRS-EGQF-EEWCIADEQVPDDELQRALDWACGKGGANC 62
           S ST L IL LS LL F++ P  S +  F EEWCIADEQVPDDELQRALDWACGKGGA+C
Sbjct: 6   SSSTHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGADC 65

Query: 63  GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 122
            +IQ+K+PCFYP+TVRDHASYAFNSYYQKFKHKGA+C+FNSAAMVT+LDPSHGSCKFEYV
Sbjct: 66  RNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYV 125

[Close]

BLAST of CmaCh18G006030 vs. NCBI nr
Match: gi|700209936|gb|KGN65032.1| (hypothetical protein Csa_1G181450 [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 5.1e-49
Identity = 96/121 (79.34%), Postives = 107/121 (88.43%), Query Frame = 1


Query: 3   SRSTRLTILHLSVLLAFLVAPRRS-EGQF-EEWCIADEQVPDDELQRALDWACGKGGANC 62
           S ST L IL LS LL F++ P  S +  F EEWCIADEQVPDDELQRALDWACGKGGA+C
Sbjct: 2   SSSTHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGADC 61

Query: 63  GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 122
            +IQ+K+PCFYP+TVRDHASYAFNSYYQKFKHKGA+C+FNSAAMVT+LDPSHGSCKFEYV
Sbjct: 62  RNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYV 121

[Close]

BLAST of CmaCh18G006030 vs. NCBI nr
Match: gi|659127253|ref|XP_008463607.1| (PREDICTED: glucan endo-1,3-beta-glucosidase-like protein 1 [Cucumis melo])

HSP 1 Score: 202.2 bits (513), Expect = 5.1e-49
Identity = 94/122 (77.05%), Postives = 108/122 (88.52%), Query Frame = 1


Query: 1   MSSRSTRLTILHLSVLLAFLVAPRRS-EGQFEEWCIADEQVPDDELQRALDWACGKGGAN 60
           MSS +  + IL+LS LL F++ P  S E   EEWCIADEQVPDDELQRALDWACGKGGA+
Sbjct: 5   MSSSTHLIIILYLSFLLLFIITPTISDEWVDEEWCIADEQVPDDELQRALDWACGKGGAD 64

Query: 61  CGDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEY 120
           C +IQ+K+PCFYP+T+RDHASYAFNSYYQKFKHKGA+C+FNSAAMVT+LDPSHGSCKFEY
Sbjct: 65  CTNIQMKQPCFYPNTLRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEY 124

Query: 121 VP 122
           VP
Sbjct: 125 VP 126

[Close]

BLAST of CmaCh18G006030 vs. NCBI nr
Match: gi|743920910|ref|XP_011004510.1| (PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Populus euphratica])

HSP 1 Score: 185.3 bits (469), Expect = 6.5e-44
Identity = 82/121 (67.77%), Postives = 100/121 (82.64%), Query Frame = 1


Query: 1   MSSRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANC 60
           MS    R+ +L LS L   L   ++SEGQFEEWCIADEQ PDDELQRA+DWACGKGGA+C
Sbjct: 2   MSPNFPRILLLALSFLALML---QKSEGQFEEWCIADEQTPDDELQRAMDWACGKGGADC 61

Query: 61  GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 120
             IQ+ +PC+ P+T+RDHASYAFN YYQKFKHKGA+C+FN+AA++T LDPSH SCKF+Y+
Sbjct: 62  SKIQMNQPCYMPNTIRDHASYAFNDYYQKFKHKGATCYFNAAALITDLDPSHHSCKFDYL 119

Query: 121 P 122
           P
Sbjct: 122 P 119

[Close]

BLAST of CmaCh18G006030 vs. NCBI nr
Match: gi|566173969|ref|XP_002307902.2| (hypothetical protein POPTR_0006s01780g [Populus trichocarpa])

HSP 1 Score: 179.5 bits (454), Expect = 3.5e-42
Identity = 80/121 (66.12%), Postives = 98/121 (80.99%), Query Frame = 1


Query: 1   MSSRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANC 60
           MS    R+ +L LS     L   ++SEGQFEEWCIADEQ PDDELQRA+DWACGKGGA+C
Sbjct: 2   MSPNFPRILLLALSFHALML---QKSEGQFEEWCIADEQTPDDELQRAMDWACGKGGADC 61

Query: 61  GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 120
             IQ+ +PC+ P+T+RDHASYAFN YYQKFKHKGA+C+FN+AA++T LDPS  SCKF+Y+
Sbjct: 62  SKIQMNQPCYMPNTIRDHASYAFNDYYQKFKHKGATCYFNAAALITDLDPSQHSCKFDYL 119

Query: 121 P 122
           P
Sbjct: 122 P 119

The following BLAST results are available for this feature:

BLAST of CmaCh18G006030 vs. Swiss-Prot


Match Name	E-value	Identity	Description
E1312_ARATH	4.1e-22	48.94	Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV...	[more]
E131_ARATH	6.9e-22	46.90	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=...	[more]
PDCB5_ARATH	5.0e-20	41.23	PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana GN=PDCB5 PE=1 SV...	[more]
E134_ARATH	1.4e-19	47.06	Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=...	[more]
E1313_ARATH	3.6e-18	43.33	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV...	[more]

BLAST of CmaCh18G006030 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW57_CUCSA	3.6e-49	79.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181450 PE=4 SV=1	[more]
A9P8Y9_POPTR	2.5e-42	66.12	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s01780g PE=2 SV=1	[more]
V4WA31_9ROSI	7.2e-42	69.64	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017213mg PE=4 SV=1	[more]
G7JMV2_MEDTR	4.7e-41	64.46	Glucan endo-1,3-beta-glucosidase-like protein OS=Medicago truncatula GN=MTR_4g13...	[more]
B9IAQ9_POPTR	6.1e-41	68.87	Glycosyl hydrolase family protein OS=Populus trichocarpa GN=POPTR_0014s16250g PE...	[more]

BLAST of CmaCh18G006030 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G35740.1	2.9e-42	63.56	Carbohydrate-binding X8 domain superfamily protein	[more]
AT2G04910.1	2.6e-27	54.65	Carbohydrate-binding X8 domain superfamily protein	[more]
AT5G67460.1	2.3e-23	52.94	O-Glycosyl hydrolases family 17 protein	[more]
AT4G29360.1	2.3e-23	48.94	O-Glycosyl hydrolases family 17 protein	[more]
AT1G11820.2	3.9e-23	46.90	O-Glycosyl hydrolases family 17 protein	[more]

BLAST of CmaCh18G006030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778659739\|ref\|XP_011654946.1\|	5.1e-49	79.34	PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucumis sativus]	[more]
gi\|700209936\|gb\|KGN65032.1\|	5.1e-49	79.34	hypothetical protein Csa_1G181450 [Cucumis sativus]	[more]
gi\|659127253\|ref\|XP_008463607.1\|	5.1e-49	77.05	PREDICTED: glucan endo-1,3-beta-glucosidase-like protein 1 [Cucumis melo]	[more]
gi\|743920910\|ref\|XP_011004510.1\|	6.5e-44	67.77	PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Populus euphratica]	[more]
gi\|566173969\|ref\|XP_002307902.2\|	3.5e-42	66.12	hypothetical protein POPTR_0006s01780g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012946	X8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018106	peptidyl-histidine phosphorylation
biological_process	GO:0008150	biological_process
cellular_component	GO:0009365	protein histidine kinase complex
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0004673	protein histidine kinase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0030247	polysaccharide binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G006030.1	CmaCh18G006030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 33..104 score: 1.5
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 32..117 score: 2.0
None	No IPR available	PANTHER	PTHR32227	FAMILY NOT NAMED	coord: 1..121 score: 1.1
None	No IPR available	PANTHER	PTHR32227:SF60	CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN	coord: 1..121 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G006030	Cucsa.180520	Cucumber (Gy14) v1	cgycmaB0514
CmaCh18G006030	Cla009048	Watermelon (97103) v1	cmawmB381
CmaCh18G006030	Csa1G181450	Cucumber (Chinese Long) v2	cmacuB399
CmaCh18G006030	MELO3C025538	Melon (DHL92) v3.5.1	cmameB366
CmaCh18G006030	ClCG01G010670	Watermelon (Charleston Gray)	cmawcgB341
CmaCh18G006030	CSPI01G15730	Wild cucumber (PI 183967)	cmacpiB403
CmaCh18G006030	CmoCh18G005900	Cucurbita moschata (Rifu)	cmacmoB411
CmaCh18G006030	Lsi02G011280	Bottle gourd (USVL1VR-Ls)	cmalsiB369
CmaCh18G006030	MELO3C025538.2	Melon (DHL92) v3.6.1	cmamedB414
CmaCh18G006030	CsaV3_1G017020	Cucumber (Chinese Long) v3	cmacucB0476
CmaCh18G006030	CsaV3_UNG053460	Cucumber (Chinese Long) v3	cmacucB0510
CmaCh18G006030	Cla97C01G010440	Watermelon (97103) v2	cmawmbB394
CmaCh18G006030	Bhi08G000629	Wax gourd	cmawgoB0535
CmaCh18G006030	CsGy1G015440	Cucumber (Gy14) v2	cgybcmaB095
CmaCh18G006030	Carg25610	Silver-seed gourd	carcmaB0060

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G006030	Wax gourd	cmawgoB0515
CmaCh18G006030	Cucurbita maxima (Rimu)	cmacmaB211
CmaCh18G006030	Cucurbita maxima (Rimu)	cmacmaB212
CmaCh18G006030	Cucurbita maxima (Rimu)	cmacmaB216
CmaCh18G006030	Cucurbita maxima (Rimu)	cmacmaB399
CmaCh18G006030	Cucumber (Gy14) v1	cgycmaB0040
CmaCh18G006030	Cucurbita moschata (Rifu)	cmacmoB398
CmaCh18G006030	Cucurbita moschata (Rifu)	cmacmoB395
CmaCh18G006030	Cucurbita moschata (Rifu)	cmacmoB396
CmaCh18G006030	Cucurbita moschata (Rifu)	cmacmoB407
CmaCh18G006030	Cucurbita moschata (Rifu)	cmacmoB419
CmaCh18G006030	Cucurbita moschata (Rifu)	cmacmoB428
CmaCh18G006030	Wild cucumber (PI 183967)	cmacpiB428
CmaCh18G006030	Cucumber (Chinese Long) v2	cmacuB425
CmaCh18G006030	Watermelon (Charleston Gray)	cmawcgB349
CmaCh18G006030	Watermelon (97103) v1	cmawmB389
CmaCh18G006030	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G006030	Cucurbita pepo (Zucchini)	cmacpeB419
CmaCh18G006030	Cucurbita pepo (Zucchini)	cmacpeB438
CmaCh18G006030	Cucurbita pepo (Zucchini)	cmacpeB444
CmaCh18G006030	Bottle gourd (USVL1VR-Ls)	cmalsiB367
CmaCh18G006030	Cucumber (Gy14) v2	cgybcmaB771
CmaCh18G006030	Silver-seed gourd	carcmaB0562
CmaCh18G006030	Silver-seed gourd	carcmaB0907
CmaCh18G006030	Silver-seed gourd	carcmaB1436
CmaCh18G006030	Cucumber (Chinese Long) v3	cmacucB0509
CmaCh18G006030	Watermelon (97103) v2	cmawmbB402