CSPI01G15730 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G15730
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Glucan endo-1,3-beta-glucosidase-like protein
Location	Chr1 : 11270047 .. 11271878 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCACACGCTGTGTATTGTTGATGAAGAAACAAATGTCTTCCTCTACTCACCTCATCATTCTCTCTCTCTCTTTCCTCCTGCTTTTTATCATAACTCCAACCATATCAGGTAATTCATCTCTTTCTAATTAATGTCTACGTGAATTCTTGATATCGTTCATTTTAGATAGACATTATTATCGTTACCTTTACTTTTTATTCGTCAAACTATTTCATACAATAATTACTAGACATATAGTTGTTTTCCTTTGTACACAAATCCAAGATCGTTTTCTTACTAGACTTTGATTACATTATTTGTCGAACAAAAGGGACTGTCAAAATCAAAATGCTATGGTTGTTTTTCAAATTTTTTCCACTTTCATTACTTCAATAGATGAACATTTATTGTTTTTAAAAGTCTTGTTTATTTAGGTTTCCACTAAAATGATTTTGTTTCTAGCCATCTACTTTTACAATATATGCTTGTTTTCCTCAAATTTTCAGTCACTGATTGAAGGATGTATTTGAAAACTTTTGTCAAATTCGAAAAGCAAACACTGCATATATATACTTTTTTTAGTTTTTAAAATTTTGCTTTGGTTTTTCCAAAACATTAATAAAAAAATGAATAGCAATTAAAACAAAGGAACTTATAGATAGAAAAGTGTTTATAAGTTCAGTTCTTTTATTAAAAAATTAAATGAAGAAACTAGGAAGTTGGTCCCTTGATGGTTACAAAAGAACAATGTTGGGTGGATGCTTCTCACTTTGAGTTTCCCTATCAAACTTTTCAACTTTAAAATGAATTTTTGGTAGTGGCTAAAAAACATCAGTGGGATCCACTTGAAAATGCAACGAAAATAGAAAAGTAATGAGAACAAAACCATATTAAACATAAAATATTCGTACTTAAAACCAAATTAATCAATAAAATAAGAAACAGAAAGGTTATATATATATATGAATCCTTTGCAGAGAAGATAGTGTATTAATAAAGTTTGATTTGGGACAGGTGATGTATCGTTTGATGAGGAGTGGTGCATAGCTGATGAGCAAGTTCCAGATGACGAGTTGCAAAGAGCTCTTGATTGGGCTTGTGGAAAAGGAGGAGCTGATTGTAGAAATATTCAAATGAAGCAACCTTGTTTTTACCCAAACACTGTTAGAGATCATGCTTCCTATGCCTTCAACAGTTACTACCAAAAGTTTAAGCACAAGGGAGCCACTTGCTATTTCAATTCAGCTGCCATGGTCACTTCTCTTGATCCTAGTAAGTATAACATCAAACTACTTAACCATAAAGGCTCGTTGGGATTAGGGTTAGAAAAAATTTGTCAAGAGATTATAGAGAACTCTTGACGCTATCCAAAAGGCATCATAATAATACCACTCTCGACGTTGTATATACGACCTCGAGAGTTCTCCATGATCTCCTGATGCATCATGTTGTACGTTGGAAGATCATCTATTTCTTTTTATTAAAAAAACACTTTTAGGTATATACATCGCTTACCCTATGTCACCTTTTTTATTGTTACAATTTCATTTGTTTTCTAACACTTTGATCTAAAATATTTAACAAAACTTGGTATTCTTTGGCAGGTCATGGTTCATGCAAGTTTGAGTACGTTCCTTGAAGAAGAGCATATTTATATATATAATTAATTGATGGATCAAAGATGGTCCCTGATTATAACTGGAGCTTCTTTTCAAATTCCATTCTTGATTTTCTACTTTGGATGTGAAAGCATTGTTTTCCCATTTTCAAATTTTAAGGTAGGATGGTTGCCTTAATATTTTAGAACCTAAGGTTTATTAATTAATCAATCAATGGAAGTATGGATGTTTGA

mRNA sequence

ATGAAGAAACAAATGTCTTCCTCTACTCACCTCATCATTCTCTCTCTCTCTTTCCTCCTGCTTTTTATCATAACTCCAACCATATCAGGTGATGTATCGTTTGATGAGGAGTGGTGCATAGCTGATGAGCAAGTTCCAGATGACGAGTTGCAAAGAGCTCTTGATTGGGCTTGTGGAAAAGGAGGAGCTGATTGTAGAAATATTCAAATGAAGCAACCTTGTTTTTACCCAAACACTGTTAGAGATCATGCTTCCTATGCCTTCAACAGTTACTACCAAAAGTTTAAGCACAAGGGAGCCACTTGCTATTTCAATTCAGCTGCCATGGTCACTTCTCTTGATCCTAGTCATGGTTCATGCAAGTTTGAGTACGTTCCTTGA

Coding sequence (CDS)

ATGAAGAAACAAATGTCTTCCTCTACTCACCTCATCATTCTCTCTCTCTCTTTCCTCCTGCTTTTTATCATAACTCCAACCATATCAGGTGATGTATCGTTTGATGAGGAGTGGTGCATAGCTGATGAGCAAGTTCCAGATGACGAGTTGCAAAGAGCTCTTGATTGGGCTTGTGGAAAAGGAGGAGCTGATTGTAGAAATATTCAAATGAAGCAACCTTGTTTTTACCCAAACACTGTTAGAGATCATGCTTCCTATGCCTTCAACAGTTACTACCAAAAGTTTAAGCACAAGGGAGCCACTTGCTATTTCAATTCAGCTGCCATGGTCACTTCTCTTGATCCTAGTCATGGTTCATGCAAGTTTGAGTACGTTCCTTGA

Homology

[Close]

BLAST of CSPI01G15730 vs. Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.5e-22
Identity = 46/91 (50.55%), Postives = 57/91 (62.64%), Query Frame = 1


Query: 36  EEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKF 95
           ++WCIA  Q    ELQ ALDWACG G  DC  +Q  QPCF P+TV  HASYAFN+YYQ+ 
Sbjct: 389 KKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQS 448

Query: 96  KHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 127
                 C FN A++    DPS+G+C +   P
Sbjct: 449 GASSIDCSFNGASVEVDKDPSYGNCLYMIAP 479

[Close]

BLAST of CSPI01G15730 vs. Swiss-Prot
Match: PDCB5_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana GN=PDCB5 PE=1 SV=2)

HSP 1 Score: 101.7 bits (252), Expect = 6.2e-21
Identity = 49/111 (44.14%), Postives = 67/111 (60.36%), Query Frame = 1


Query: 12  IILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMK 71
           I+ + + +L+ I T  I G V   E WC+A     D  LQ A++WACG+GGADC  IQ  
Sbjct: 15  ILAATAAMLMVITTAQIGGQVIQVELWCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQG 74

Query: 72  QPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKF 123
            PC  P  V+  AS+ FN+YY K   +   C FN+ A +TSL+PS G+CK+
Sbjct: 75  GPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKY 125

[Close]

BLAST of CSPI01G15730 vs. Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.8e-20
Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 1


Query: 38  WCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKH 97
           +C+A     DD+L   L+WACG+G A+C  IQ  QPC+ PN V+ HAS+AFN YYQK K 
Sbjct: 362 FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKS 421

Query: 98  KGATCYFNSAAMVTSLDPSHGSCKF 123
            G TC F+  A+ T+ DPS+ +C +
Sbjct: 422 AGGTCDFDGTAITTTRDPSYRTCAY 446

[Close]

BLAST of CSPI01G15730 vs. Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=3)

HSP 1 Score: 99.0 bits (245), Expect = 4.0e-20
Identity = 51/116 (43.97%), Postives = 69/116 (59.48%), Query Frame = 1


Query: 7   SSTHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCR 66
           +ST + +L +S    F+   T +      + +CIA + V    LQ ALDWACG G ++C 
Sbjct: 356 NSTPVYLLHVSGSGTFLANDTTN------QTYCIAMDGVDAKTLQAALDWACGPGRSNCS 415

Query: 67  NIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKF 123
            IQ  + C+ PN V+ HAS+AFNSYYQK      +C F   AM+T+ DPSHGSC F
Sbjct: 416 EIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIF 465

[Close]

BLAST of CSPI01G15730 vs. Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.4e-18
Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 1


Query: 38  WCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKH 97
           WCIA  +  + +L+ ALDWACG G  DC  IQ  QPCF P+T+  HAS+ FNSY+Q+ + 
Sbjct: 369 WCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQQNRA 428

Query: 98  KGATCYFNSAAMVTSLDPSHGSC 121
               C F  A +  + DPS+  C
Sbjct: 429 TDVACSFGGAGVKVNKDPSYDKC 451

[Close]

BLAST of CSPI01G15730 vs. TrEMBL
Match: A0A0A0LW57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181450 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 4.4e-66
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1


Query: 5   MSSSTHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGAD 64
           MSSSTHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGAD
Sbjct: 1   MSSSTHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGAD 60

Query: 65  CRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEY 124
           CRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEY
Sbjct: 61  CRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEY 120

Query: 125 VP 127
           VP
Sbjct: 121 VP 122

[Close]

BLAST of CSPI01G15730 vs. TrEMBL
Match: A9P8Y9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s01780g PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 4.9e-41
Identity = 80/116 (68.97%), Postives = 94/116 (81.03%), Query Frame = 1


Query: 11  LIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQM 70
           +++L+LSF  L +       +  F EEWCIADEQ PDDELQRA+DWACGKGGADC  IQM
Sbjct: 9   ILLLALSFHALMLQ----KSEGQF-EEWCIADEQTPDDELQRAMDWACGKGGADCSKIQM 68

Query: 71  KQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 127
            QPC+ PNT+RDHASYAFN YYQKFKHKGATCYFN+AA++T LDPS  SCKF+Y+P
Sbjct: 69  NQPCYMPNTIRDHASYAFNDYYQKFKHKGATCYFNAAALITDLDPSQHSCKFDYLP 119

[Close]

BLAST of CSPI01G15730 vs. TrEMBL
Match: A0A061GP73_THECC (Carbohydrate-binding X8 domain superfamily protein OS=Theobroma cacao GN=TCM_030398 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 4.9e-41
Identity = 85/122 (69.67%), Postives = 97/122 (79.51%), Query Frame = 1


Query: 5   MSSSTHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGAD 64
           M S+ H  +L+L F+ L I+  T   D  F  EWCIADEQ PDDELQ+ALDWACGKGGAD
Sbjct: 20  MPSALHWTLLALCFVSL-ILQKT---DAQF-REWCIADEQTPDDELQKALDWACGKGGAD 79

Query: 65  CRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEY 124
           C  IQ+ QPC+ PNT+RDHASYAFN+YYQKFK+KGATCYFNSAAM+T LDPSH SCKF  
Sbjct: 80  CSKIQVNQPCYLPNTIRDHASYAFNNYYQKFKNKGATCYFNSAAMITDLDPSHHSCKFVS 136

Query: 125 VP 127
           VP
Sbjct: 140 VP 136

[Close]

BLAST of CSPI01G15730 vs. TrEMBL
Match: B9SA90_RICCO (Hydrolase, hydrolyzing O-glycosyl compounds, putative OS=Ricinus communis GN=RCOM_0864270 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 8.3e-41
Identity = 85/122 (69.67%), Postives = 95/122 (77.87%), Query Frame = 1


Query: 5   MSSSTHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGAD 64
           MS S +L  L+L F  L     T   D  F EEWCIADEQ PD ELQ ALDWACGKGGAD
Sbjct: 1   MSFSLNLFCLALIFTAL----ATQRTDGQF-EEWCIADEQTPDQELQIALDWACGKGGAD 60

Query: 65  CRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEY 124
           CR IQ  QPC+ PNTV+DHAS+AFN+YYQKFKHKGATCYF++AAM+T LDPSH SCKFEY
Sbjct: 61  CRMIQEHQPCYLPNTVKDHASFAFNNYYQKFKHKGATCYFSAAAMITDLDPSHSSCKFEY 117

Query: 125 VP 127
           +P
Sbjct: 121 LP 117

[Close]

BLAST of CSPI01G15730 vs. TrEMBL
Match: V4WA31_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017213mg PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.1e-40
Identity = 79/119 (66.39%), Postives = 93/119 (78.15%), Query Frame = 1


Query: 8   STHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRN 67
           S+ L+ + L+FL+      T  G+     EWCIAD Q PDDELQ ALDWACGKGGADC  
Sbjct: 2   SSALLSILLAFLIAISTLQTSDGEFM---EWCIADGQTPDDELQMALDWACGKGGADCNK 61

Query: 68  IQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 127
           +Q KQPC++PNT+RDHASYAFN YYQKFKH+GATCYF++AAM+T LDPSH SCKFEY P
Sbjct: 62  LQAKQPCYFPNTLRDHASYAFNDYYQKFKHQGATCYFHAAAMITDLDPSHRSCKFEYRP 117

[Close]

BLAST of CSPI01G15730 vs. TAIR10
Match: AT5G35740.1 (AT5G35740.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 163.3 bits (412), Expect = 9.7e-41
Identity = 77/120 (64.17%), Postives = 92/120 (76.67%), Query Frame = 1


Query: 8   STHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRN 67
           ST LI + L  L++ +  P  S   S  E+WCIADEQ PDDELQ ALDWACGKGGADC  
Sbjct: 2   STFLIRILLPLLIIAMTLPRRSEAES--EQWCIADEQTPDDELQAALDWACGKGGADCSK 61

Query: 68  IQMK-QPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 127
           +Q + QPCF PNT+RDHAS+AFNSYYQ +K+KG +CYF  AAM+T LDPSHGSC++EY P
Sbjct: 62  MQQENQPCFLPNTIRDHASFAFNSYYQTYKNKGGSCYFKGAAMITELDPSHGSCQYEYNP 119

[Close]

BLAST of CSPI01G15730 vs. TAIR10
Match: AT2G04910.1 (AT2G04910.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 119.8 bits (299), Expect = 1.2e-27
Identity = 48/80 (60.00%), Postives = 60/80 (75.00%), Query Frame = 1


Query: 37  EWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFK 96
           +WC+AD Q+PD+ +Q A+DWAC  GGADC  IQ  QPCF PNTV+DHAS  FN+YYQ++K
Sbjct: 14  QWCVADGQIPDNVIQAAVDWACQTGGADCSTIQPNQPCFLPNTVKDHASVVFNNYYQRYK 73

Query: 97  HKGATCYFNSAAMVTSLDPS 117
             G +C FNS A +T  DPS
Sbjct: 74  RNGGSCNFNSTAFITQTDPS 93

[Close]

BLAST of CSPI01G15730 vs. TAIR10
Match: AT4G29360.1 (AT4G29360.1 O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 106.3 bits (264), Expect = 1.4e-23
Identity = 46/91 (50.55%), Postives = 57/91 (62.64%), Query Frame = 1


Query: 36  EEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKF 95
           ++WCIA  Q    ELQ ALDWACG G  DC  +Q  QPCF P+TV  HASYAFN+YYQ+ 
Sbjct: 389 KKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQS 448

Query: 96  KHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 127
                 C FN A++    DPS+G+C +   P
Sbjct: 449 GASSIDCSFNGASVEVDKDPSYGNCLYMIAP 479

[Close]

BLAST of CSPI01G15730 vs. TAIR10
Match: AT1G29380.1 (AT1G29380.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 106.3 bits (264), Expect = 1.4e-23
Identity = 51/87 (58.62%), Postives = 59/87 (67.82%), Query Frame = 1


Query: 37  EWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFK 96
           +WCIA        LQ ALD+ACG GGADC  IQ    C+ PNT+RDHAS+AFNSYYQ  K
Sbjct: 147 QWCIAKANASPTSLQVALDYACGYGGADCGQIQQGAACYEPNTIRDHASFAFNSYYQ--K 206

Query: 97  HKGA-TCYFNSAAMVTSLDPSHGSCKF 123
           H G+ +C F  AA +TS DPS GSC F
Sbjct: 207 HPGSDSCNFGGAAQLTSTDPSKGSCHF 231

[Close]

BLAST of CSPI01G15730 vs. TAIR10
Match: AT2G05790.1 (AT2G05790.1 O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 104.0 bits (258), Expect = 7.0e-23
Identity = 49/103 (47.57%), Postives = 64/103 (62.14%), Query Frame = 1


Query: 23  IITPTISGDVSFDEE---WCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNT 82
           +  P +SG VS       WC+A+    ++ LQ  LD+ACG+GGADCR IQ    C+ P+T
Sbjct: 366 VTKPPMSGGVSKSLNGYTWCVANGDAGEERLQGGLDYACGEGGADCRPIQPGANCYSPDT 425

Query: 83  VRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKF 123
           +  HAS+AFNSYYQK    G +CYF  AA V S  P +G C+F
Sbjct: 426 LEAHASFAFNSYYQKKGRAGGSCYFGGAAYVVSQPPKYGRCEF 468

[Close]

BLAST of CSPI01G15730 vs. NCBI nr
Match: gi|778659739|ref|XP_011654946.1| (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 2.3e-68
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1


Query: 1   MKKQMSSSTHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGK 60
           MKKQMSSSTHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGK
Sbjct: 1   MKKQMSSSTHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGK 60

Query: 61  GGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSC 120
           GGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSC
Sbjct: 61  GGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSC 120

Query: 121 KFEYVP 127
           KFEYVP
Sbjct: 121 KFEYVP 126

[Close]

BLAST of CSPI01G15730 vs. NCBI nr
Match: gi|700209936|gb|KGN65032.1| (hypothetical protein Csa_1G181450 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 6.3e-66
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1


Query: 5   MSSSTHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGAD 64
           MSSSTHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGAD
Sbjct: 1   MSSSTHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGAD 60

Query: 65  CRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEY 124
           CRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEY
Sbjct: 61  CRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEY 120

Query: 125 VP 127
           VP
Sbjct: 121 VP 122

[Close]

BLAST of CSPI01G15730 vs. NCBI nr
Match: gi|659127253|ref|XP_008463607.1| (PREDICTED: glucan endo-1,3-beta-glucosidase-like protein 1 [Cucumis melo])

HSP 1 Score: 239.2 bits (609), Expect = 4.0e-60
Identity = 118/127 (92.91%), Postives = 119/127 (93.70%), Query Frame = 1


Query: 1   MKKQMSSSTHLII-LSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACG 60
           M KQMSSSTHLII L LSFLLLFIITPTIS D   DEEWCIADEQVPDDELQRALDWACG
Sbjct: 1   MNKQMSSSTHLIIILYLSFLLLFIITPTIS-DEWVDEEWCIADEQVPDDELQRALDWACG 60

Query: 61  KGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGS 120
           KGGADC NIQMKQPCFYPNT+RDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGS
Sbjct: 61  KGGADCTNIQMKQPCFYPNTLRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGS 120

Query: 121 CKFEYVP 127
           CKFEYVP
Sbjct: 121 CKFEYVP 126

[Close]

BLAST of CSPI01G15730 vs. NCBI nr
Match: gi|743920910|ref|XP_011004510.1| (PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Populus euphratica])

HSP 1 Score: 181.0 bits (458), Expect = 1.3e-42
Identity = 82/116 (70.69%), Postives = 96/116 (82.76%), Query Frame = 1


Query: 11  LIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQM 70
           +++L+LSFL L +       +  F EEWCIADEQ PDDELQRA+DWACGKGGADC  IQM
Sbjct: 9   ILLLALSFLALMLQ----KSEGQF-EEWCIADEQTPDDELQRAMDWACGKGGADCSKIQM 68

Query: 71  KQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYVP 127
            QPC+ PNT+RDHASYAFN YYQKFKHKGATCYFN+AA++T LDPSH SCKF+Y+P
Sbjct: 69  NQPCYMPNTIRDHASYAFNDYYQKFKHKGATCYFNAAALITDLDPSHHSCKFDYLP 119

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BLAST of CSPI01G15730 vs. NCBI nr
Match: gi|802578118|ref|XP_012069362.1| (PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Jatropha curcas])

HSP 1 Score: 179.1 bits (453), Expect = 4.9e-42
Identity = 87/122 (71.31%), Postives = 100/122 (81.97%), Query Frame = 1


Query: 5   MSSSTHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGAD 64
           MSSS H+ +L+L F+ L    P  S D  F EEWCIADEQ P+ ELQ ALDWACGKGGAD
Sbjct: 16  MSSSIHIFLLALIFVAL---APQKS-DGQF-EEWCIADEQTPEAELQIALDWACGKGGAD 75

Query: 65  CRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEY 124
           CR IQ  QPC++PNTV+DHAS+AFNSYYQKFKHKGATCYF+SAA++T LDPSH SCKFEY
Sbjct: 76  CRMIQENQPCYFPNTVKDHASFAFNSYYQKFKHKGATCYFSSAAIITDLDPSHHSCKFEY 132

Query: 125 VP 127
           +P
Sbjct: 136 LP 132

The following BLAST results are available for this feature:

BLAST of CSPI01G15730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
E1312_ARATH	2.5e-22	50.55	Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV...	[more]
PDCB5_ARATH	6.2e-21	44.14	PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana GN=PDCB5 PE=1 SV...	[more]
E134_ARATH	1.8e-20	49.41	Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=...	[more]
E131_ARATH	4.0e-20	43.97	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=...	[more]
E1313_ARATH	6.4e-18	45.78	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV...	[more]

BLAST of CSPI01G15730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW57_CUCSA	4.4e-66	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181450 PE=4 SV=1	[more]
A9P8Y9_POPTR	4.9e-41	68.97	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s01780g PE=2 SV=1	[more]
A0A061GP73_THECC	4.9e-41	69.67	Carbohydrate-binding X8 domain superfamily protein OS=Theobroma cacao GN=TCM_030...	[more]
B9SA90_RICCO	8.3e-41	69.67	Hydrolase, hydrolyzing O-glycosyl compounds, putative OS=Ricinus communis GN=RCO...	[more]
V4WA31_9ROSI	1.1e-40	66.39	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017213mg PE=4 SV=1	[more]

BLAST of CSPI01G15730 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G35740.1	9.7e-41	64.17	Carbohydrate-binding X8 domain superfamily protein	[more]
AT2G04910.1	1.2e-27	60.00	Carbohydrate-binding X8 domain superfamily protein	[more]
AT4G29360.1	1.4e-23	50.55	O-Glycosyl hydrolases family 17 protein	[more]
AT1G29380.1	1.4e-23	58.62	Carbohydrate-binding X8 domain superfamily protein	[more]
AT2G05790.1	7.0e-23	47.57	O-Glycosyl hydrolases family 17 protein	[more]

BLAST of CSPI01G15730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778659739\|ref\|XP_011654946.1\|	2.3e-68	100.00	PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucumis sativus]	[more]
gi\|700209936\|gb\|KGN65032.1\|	6.3e-66	100.00	hypothetical protein Csa_1G181450 [Cucumis sativus]	[more]
gi\|659127253\|ref\|XP_008463607.1\|	4.0e-60	92.91	PREDICTED: glucan endo-1,3-beta-glucosidase-like protein 1 [Cucumis melo]	[more]
gi\|743920910\|ref\|XP_011004510.1\|	1.3e-42	70.69	PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Populus euphratica]	[more]
gi\|802578118\|ref\|XP_012069362.1\|	4.9e-42	71.31	PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012946	X8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018106	peptidyl-histidine phosphorylation
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0009365	protein histidine kinase complex
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0046658	anchored component of plasma membrane
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0004673	protein histidine kinase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0030247	polysaccharide binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G15730.1	CSPI01G15730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 38..109 score: 2.9
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 37..122 score: 1.3
None	No IPR available	PANTHER	PTHR32227	FAMILY NOT NAMED	coord: 12..126 score: 7.6
None	No IPR available	PANTHER	PTHR32227:SF60	CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN	coord: 12..126 score: 7.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G15730	Cla009048	Watermelon (97103) v1	cpiwmB054
CSPI01G15730	Csa1G181450	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G15730	MELO3C025538	Melon (DHL92) v3.5.1	cpimeB016
CSPI01G15730	ClCG01G010670	Watermelon (Charleston Gray)	cpiwcgB025
CSPI01G15730	Lsi02G011280	Bottle gourd (USVL1VR-Ls)	cpilsiB033
CSPI01G15730	MELO3C025538.2	Melon (DHL92) v3.6.1	cpimedB025
CSPI01G15730	CsaV3_UNG053460	Cucumber (Chinese Long) v3	cpicucB060
CSPI01G15730	CsaV3_1G017020	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G15730	Cla97C01G010440	Watermelon (97103) v2	cpiwmbB009
CSPI01G15730	Bhi08G000629	Wax gourd	cpiwgoB036
CSPI01G15730	Cucsa.180520	Cucumber (Gy14) v1	cgycpiB286
CSPI01G15730	CmaCh18G006030	Cucurbita maxima (Rimu)	cmacpiB403
CSPI01G15730	CmoCh18G005900	Cucurbita moschata (Rifu)	cmocpiB385
CSPI01G15730	CsGy1G015440	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G15730	Carg25610	Silver-seed gourd	carcpiB0055

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G15730	Cucumber (Chinese Long) v3	cpicucB052
CSPI01G15730	Watermelon (97103) v2	cpiwmbB005
CSPI01G15730	Wild cucumber (PI 183967)	cpicpiB039
CSPI01G15730	Cucumber (Gy14) v1	cgycpiB017
CSPI01G15730	Cucurbita maxima (Rimu)	cmacpiB212
CSPI01G15730	Cucurbita maxima (Rimu)	cmacpiB224
CSPI01G15730	Cucurbita moschata (Rifu)	cmocpiB200
CSPI01G15730	Cucurbita moschata (Rifu)	cmocpiB211
CSPI01G15730	Watermelon (Charleston Gray)	cpiwcgB022
CSPI01G15730	Watermelon (97103) v1	cpiwmB050
CSPI01G15730	Cucurbita pepo (Zucchini)	cpecpiB017
CSPI01G15730	Cucurbita pepo (Zucchini)	cpecpiB051
CSPI01G15730	Cucurbita pepo (Zucchini)	cpecpiB511
CSPI01G15730	Bottle gourd (USVL1VR-Ls)	cpilsiB019
CSPI01G15730	Bottle gourd (USVL1VR-Ls)	cpilsiB038
CSPI01G15730	Cucumber (Gy14) v2	cgybcpiB249
CSPI01G15730	Silver-seed gourd	carcpiB0435
CSPI01G15730	Silver-seed gourd	carcpiB1074