CsaV3_UNG046330 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_UNG046330
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionZinc finger CCCH domain-containing protein
Locationscaffold72 : 14990 .. 15834 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGCATCCCTCCGGAACTTACATCTGAGCAAGGTCAAATCGTTACCATCTTCCTGGAATGTTCAAATTGGCTCTCCTGGTTATCCATCTCGAGTCTGCCATGGATTTTGCAGCCTTCCAACAACTCCAACTCGGGCTCCAACTGGTCATGGTGTTGGACTGCTCGATTTCACAGAGCATGGATTCGAGGAGGAGCCGGTGATGGAGCGAGTCGAATCGGGGAGGGAGCTGAGGGCAAAGATGCTGGAGAAGCTGAGCAAGGAAAATTCGCTGGACTGGGCTGAGTCAAATCCTTCAACCTGCACACCGGATGTTGAATGGGTATCAGAGCTAGTGAAGTGAGTATTGAAATTGAACTTTTTGGTTGGTTCTTCAAATGGGTTTTTTTTCTCTAATCATTATTCGATTCTGATTTTAAGGAAACAAAAAATTAGCCTAAGCCTAAGCCTAAGCCTAAGCCGAATCTTTTTGTTTGATATGTAAATACACAAAATGGGGGCAACTAAAACTGGGAAGACAATAGGATTTTAATTTTTACTTGTGTAAGCCTTAAATATGTATATATGGGCTCTGTTTTTAGAATTTTGAAATGGGTTGATAAGAATTTTGATGGAGAAATGAAAATTCCATCTAACTCTCAATGTATAGGTAGTAATTTTAGTGAACTAGATATGATGATCCATAGGATCATGGGGTTATGATAGTTTTCTACTTTCTGATCATTGTGATTATATATTGTAAGTTAATGTTTGTGTTAATGCAAATTATATGGATGAACTTGATTTAAATTGTCGTTGACTTGTTAATTGTGTTGTTGTTGATAAAGGTGGCCTGAATTGTGA

mRNA sequence

ATGGTCGCATCCCTCCGGAACTTACATCTGAGCAAGGTCAAATCGTTACCATCTTCCTGGAATGTTCAAATTGGCTCTCCTGGTTATCCATCTCGAGTCTGCCATGGATTTTGCAGCCTTCCAACAACTCCAACTCGGGCTCCAACTGGTCATGGTGTTGGACTGCTCGATTTCACAGAGCATGGATTCGAGGAGGAGCCGGTGATGGAGCGAGTCGAATCGGGGAGGGAGCTGAGGGCAAAGATGCTGGAGAAGCTGAGCAAGGAAAATTCGCTGGACTGGGCTGAGTCAAATCCTTCAACCTGCACACCGGATGTTGAATGGGTATCAGAGCTAGTGAAGTGGCCTGAATTGTGA

Coding sequence (CDS)

ATGGTCGCATCCCTCCGGAACTTACATCTGAGCAAGGTCAAATCGTTACCATCTTCCTGGAATGTTCAAATTGGCTCTCCTGGTTATCCATCTCGAGTCTGCCATGGATTTTGCAGCCTTCCAACAACTCCAACTCGGGCTCCAACTGGTCATGGTGTTGGACTGCTCGATTTCACAGAGCATGGATTCGAGGAGGAGCCGGTGATGGAGCGAGTCGAATCGGGGAGGGAGCTGAGGGCAAAGATGCTGGAGAAGCTGAGCAAGGAAAATTCGCTGGACTGGGCTGAGTCAAATCCTTCAACCTGCACACCGGATGTTGAATGGGTATCAGAGCTAGTGAAGTGGCCTGAATTGTGA

Protein sequence

MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFTEHGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVKWPEL
Homology
[Close]
BLAST of CsaV3_UNG046330 vs. NCBI nr
Match: XP_004135688.1 (PREDICTED: zinc finger CCCH domain-containing protein 20-like [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 7.2e-60
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFTE 60
           MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFTE
Sbjct: 269 MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFTE 328

Query: 61  HGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK 115
           HGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK
Sbjct: 329 HGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK 382

[Close]
BLAST of CsaV3_UNG046330 vs. NCBI nr
Match: KGN66203.1 (hypothetical protein Csa_1G575190 [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 7.2e-60
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFTE 60
           MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFTE
Sbjct: 164 MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFTE 223

Query: 61  HGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK 115
           HGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK
Sbjct: 224 HGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK 277

[Close]
BLAST of CsaV3_UNG046330 vs. NCBI nr
Match: NP_001315383.1 (zinc finger CCCH domain-containing protein 49-like [Cucumis melo] >AGL76984.1 zinc finger CCCH domain-containing protein [Cucumis melo])

HSP 1 Score: 235.3 bits (599), Expect = 1.0e-58
Identity = 112/114 (98.25%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFTE 60
           MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDF+E
Sbjct: 272 MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFSE 331

Query: 61  HGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK 115
           +GFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK
Sbjct: 332 YGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK 385

[Close]
BLAST of CsaV3_UNG046330 vs. NCBI nr
Match: XP_022961034.1 (zinc finger CCCH domain-containing protein 20 [Cucurbita moschata])

HSP 1 Score: 206.5 bits (524), Expect = 5.2e-50
Identity = 98/114 (85.96%), Postives = 105/114 (92.11%), Query Frame = 0 

Query: 1   MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFTE 60
           MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSR+CHGFCSLPTTPTRAPT  GVGLLDF++
Sbjct: 268 MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRICHGFCSLPTTPTRAPTAPGVGLLDFSD 327

Query: 61  HGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK 115
           HG +EEP MERVESGRELRAKMLEKLSKENSLD  +S+ S CTPDV WVSEL+K
Sbjct: 328 HGLQEEPAMERVESGRELRAKMLEKLSKENSLDLVDSSSSACTPDVGWVSELLK 381

[Close]
BLAST of CsaV3_UNG046330 vs. NCBI nr
Match: XP_023516367.1 (zinc finger CCCH domain-containing protein 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.5 bits (524), Expect = 5.2e-50
Identity = 98/114 (85.96%), Postives = 105/114 (92.11%), Query Frame = 0 

Query: 1   MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFTE 60
           MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSR+CHGFCSLPTTPTRAPT  GVGLLDF++
Sbjct: 268 MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRICHGFCSLPTTPTRAPTAPGVGLLDFSD 327

Query: 61  HGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK 115
           HG +EEP MERVESGRELRAKMLEKLSKENSLD  +S+ S CTPDV WVSEL+K
Sbjct: 328 HGLQEEPAMERVESGRELRAKMLEKLSKENSLDLVDSSSSACTPDVGWVSELLK 381

[Close]
BLAST of CsaV3_UNG046330 vs. TAIR10
Match: AT2G19810.1 (CCCH-type zinc finger family protein)

HSP 1 Score: 105.5 bits (262), Expect = 2.3e-23
Identity = 68/123 (55.28%), Postives = 81/123 (65.85%), Query Frame = 0 

Query: 1   MVASLRNLHLSKVK-SLPSSWNVQIGSPGYP------SRVCHGFCSLPTTPTRAPTGHGV 60
           +VASLRNL L+KVK SL SS+N QIG  G        S +  GF SLPTTPTR       
Sbjct: 242 VVASLRNLQLNKVKSSLSSSYNNQIGGYGXXXXXXRGSVLGPGFRSLPTTPTRP------ 301

Query: 61  GLLDFTEHGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNP---STCTPDVEWVS 114
           G ++  E+G EEEP MERVESGRELRA++ EKLSKEN +   E +P   +  TPDV WVS
Sbjct: 302 GFMNIWENGLEEEPAMERVESGRELRAQLFEKLSKENCMGRIEPDPDQGAGDTPDVGWVS 358

[Close]
BLAST of CsaV3_UNG046330 vs. TAIR10
Match: AT4G29190.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 88.2 bits (217), Expect = 3.7e-18
Identity = 61/118 (51.69%), Postives = 71/118 (60.17%), Query Frame = 0 

Query: 1   MVASLRNLHLSKVKSLPSSWNV-QIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFT 60
           +V S RNL  + VKS P +  +   GSP   S +  GF SLPTTPTR       G LD  
Sbjct: 245 VVPSFRNLQFNSVKSFPRNNPLFGFGSP-RGSILGPGFQSLPTTPTRP------GNLDIW 304

Query: 61  EHGFEEEPVMER-VESGRELRAKMLEKLSKENSLDWAESNPSTC---TPDVEWVSELV 114
           E+G EEEPVMER VESGRELR KM EKL KEN +D    +P       PDV WVS+L+
Sbjct: 305 EYGLEEEPVMERVVESGRELREKMREKLHKENCMDRVAQDPDQNLGEAPDVGWVSDLL 355

[Close]
BLAST of CsaV3_UNG046330 vs. TAIR10
Match: AT2G25900.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 41.2 bits (95), Expect = 5.2e-04
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 0 

Query: 60  EHGFEEEPVMERVESGRELRAKMLEKLSKENSL 93
           E   EE P ME VESG+ELRA+M  +LS+ENSL
Sbjct: 282 EFEIEEAPAMEFVESGKELRAEMYARLSRENSL 314

[Close]
BLAST of CsaV3_UNG046330 vs. Swiss-Prot
Match: sp|O82199|C3H20_ARATH (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=At2g19810 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.1e-22
Identity = 68/123 (55.28%), Postives = 81/123 (65.85%), Query Frame = 0 

Query: 1   MVASLRNLHLSKVK-SLPSSWNVQIGSPGYP------SRVCHGFCSLPTTPTRAPTGHGV 60
           +VASLRNL L+KVK SL SS+N QIG  G        S +  GF SLPTTPTR       
Sbjct: 242 VVASLRNLQLNKVKSSLSSSYNNQIGGYGXXXXXXRGSVLGPGFRSLPTTPTRP------ 301

Query: 61  GLLDFTEHGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNP---STCTPDVEWVS 114
           G ++  E+G EEEP MERVESGRELRA++ EKLSKEN +   E +P   +  TPDV WVS
Sbjct: 302 GFMNIWENGLEEEPAMERVESGRELRAQLFEKLSKENCMGRIEPDPDQGAGDTPDVGWVS 358

[Close]
BLAST of CsaV3_UNG046330 vs. Swiss-Prot
Match: sp|Q9M0G2|C3H49_ARATH (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 6.7e-17
Identity = 61/118 (51.69%), Postives = 71/118 (60.17%), Query Frame = 0 

Query: 1   MVASLRNLHLSKVKSLPSSWNV-QIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFT 60
           +V S RNL  + VKS P +  +   GSP   S +  GF SLPTTPTR       G LD  
Sbjct: 245 VVPSFRNLQFNSVKSFPRNNPLFGFGSP-RGSILGPGFQSLPTTPTRP------GNLDIW 304

Query: 61  EHGFEEEPVMER-VESGRELRAKMLEKLSKENSLDWAESNPSTC---TPDVEWVSELV 114
           E+G EEEPVMER VESGRELR KM EKL KEN +D    +P       PDV WVS+L+
Sbjct: 305 EYGLEEEPVMERVVESGRELREKMREKLHKENCMDRVAQDPDQNLGEAPDVGWVSDLL 355

[Close]
BLAST of CsaV3_UNG046330 vs. Swiss-Prot
Match: sp|Q9FU27|C3H2_ORYSJ (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0192000 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 49/125 (39.20%), Postives = 69/125 (55.20%), Query Frame = 0 

Query: 1   MVASLRNLHLSKVKSLPS-SWNVQIGSPGYPS-RVCHGFCSLPTTP--------TRAPTG 60
           ++AS R L L+KVKS PS  W+    S  Y S +   G  SLPTTP        T +   
Sbjct: 263 VLASFRQLRLNKVKSSPSGGWSYPSSSAVYGSPKAATGLYSLPTTPLASTATVTTASSFM 322

Query: 61  HGVGLLDFTEHGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTP--DVEW 114
             +  LD    G +EEPV +RVESGR LR K+ E+LS++ ++    +  +T     DV+W
Sbjct: 323 PNLEPLDLGLIG-DEEPV-QRVESGRALREKVFERLSRDGAISGDATAFATAGVGLDVDW 382

[Close]
BLAST of CsaV3_UNG046330 vs. Swiss-Prot
Match: sp|Q6L4N4|C3H35_ORYSJ (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0195200 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.5e-05
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 0 

Query: 64  EEEPVMERVESGRELRAKMLEKLSKENSLDW-AESNPSTCTPDVEWVSELV 114
           EEE  MERVESGR LR K+ E+LSKE ++   A +  +   PDV WVS+L+
Sbjct: 351 EEEQPMERVESGRALREKVFERLSKEATVSTDAAAAAAGVAPDVGWVSDLI 401

[Close]
BLAST of CsaV3_UNG046330 vs. TrEMBL
Match: tr|A0A0A0LWQ7|A0A0A0LWQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G575190 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.8e-60
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFTE 60
           MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFTE
Sbjct: 164 MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFTE 223

Query: 61  HGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK 115
           HGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK
Sbjct: 224 HGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK 277

[Close]
BLAST of CsaV3_UNG046330 vs. TrEMBL
Match: tr|A0A1S3BQ41|A0A1S3BQ41_CUCME (zinc finger CCCH domain-containing protein 49-like OS=Cucumis melo OX=3656 GN=LOC103492287 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 6.9e-59
Identity = 112/114 (98.25%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFTE 60
           MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDF+E
Sbjct: 269 MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFSE 328

Query: 61  HGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK 115
           +GFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK
Sbjct: 329 YGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK 382

[Close]
BLAST of CsaV3_UNG046330 vs. TrEMBL
Match: tr|R4QQJ8|R4QQJ8_CUCME (Zinc finger CCCH domain-containing protein OS=Cucumis melo OX=3656 PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 6.9e-59
Identity = 112/114 (98.25%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFTE 60
           MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDF+E
Sbjct: 272 MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSRVCHGFCSLPTTPTRAPTGHGVGLLDFSE 331

Query: 61  HGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK 115
           +GFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK
Sbjct: 332 YGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK 385

[Close]
BLAST of CsaV3_UNG046330 vs. TrEMBL
Match: tr|A0A2N9IKS7|A0A2N9IKS7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52602 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-32
Identity = 80/119 (67.23%), Postives = 90/119 (75.63%), Query Frame = 0 

Query: 1   MVASLRNLHLSKVKSLPSSWNVQIGSPGYPSR----VCHGFCSLPTTPTR-APTGHGVGL 60
           MVASLRNL L KVKSLPSSWNVQIGS G+ S     +  GFCS+PTTPTR APT  G+G 
Sbjct: 277 MVASLRNLQLGKVKSLPSSWNVQIGSSGFGSPRGSILRPGFCSMPTTPTRTAPTRPGIGY 336

Query: 61  LDFTEHGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEWVSELVK 115
            D  E G EEEP MERVESGR++RAKM EKL +ENSL   + +PST +PDV WVSELVK
Sbjct: 337 FDLWEQGCEEEPPMERVESGRDIRAKMFEKLREENSLGRVDPSPSTNSPDVGWVSELVK 395

[Close]
BLAST of CsaV3_UNG046330 vs. TrEMBL
Match: tr|A0A251NEY3|A0A251NEY3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G216200 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.2e-32
Identity = 81/126 (64.29%), Postives = 87/126 (69.05%), Query Frame = 0 

Query: 1   MVASLRNLHLSKVKSLPSSWNVQI-----GSPGYPSRVC-------HGFCSLPTTPTRAP 60
           +VASLRNL L KVKSLPSSWNVQ+     GSPG P  V         GFCSLP+TPTR P
Sbjct: 272 VVASLRNLQLGKVKSLPSSWNVQVGSSGFGSPGSPGFVSPRGSILRPGFCSLPSTPTRVP 331

Query: 61  TGHGVGLLDFTEHGFEEEPVMERVESGRELRAKMLEKLSKENSLDWAESNPSTCTPDVEW 115
              G+G LDF E G EEEP MERVESGR LRAKM E+L +ENSL   ES PS   PDV W
Sbjct: 332 GRSGIGYLDFCEEGCEEEPAMERVESGRGLRAKMFERLREENSLGRVESGPSGGAPDVGW 391

The following BLAST results are available for this feature:
BLAST of CsaV3_UNG046330 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004135688.17.2e-60100.00PREDICTED: zinc finger CCCH domain-containing protein 20-like [Cucumis sativus][more]
KGN66203.17.2e-60100.00hypothetical protein Csa_1G575190 [Cucumis sativus][more]
NP_001315383.11.0e-5898.25zinc finger CCCH domain-containing protein 49-like [Cucumis melo] >AGL76984.1 zi... [more]
XP_022961034.15.2e-5085.96zinc finger CCCH domain-containing protein 20 [Cucurbita moschata][more]
XP_023516367.15.2e-5085.96zinc finger CCCH domain-containing protein 20-like [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_UNG046330 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G19810.12.3e-2355.28CCCH-type zinc finger family protein[more]
AT4G29190.13.7e-1851.69Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT2G25900.15.2e-0463.64Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
BLAST of CsaV3_UNG046330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O82199|C3H20_ARATH4.1e-2255.28Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q9M0G2|C3H49_ARATH6.7e-1751.69Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q9FU27|C3H2_ORYSJ1.1e-0839.20Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=... [more]
sp|Q6L4N4|C3H35_ORYSJ4.5e-0552.94Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX... [more]
BLAST of CsaV3_UNG046330 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LWQ7|A0A0A0LWQ7_CUCSA4.8e-60100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G575190 PE=4 SV=1[more]
tr|A0A1S3BQ41|A0A1S3BQ41_CUCME6.9e-5998.25zinc finger CCCH domain-containing protein 49-like OS=Cucumis melo OX=3656 GN=LO... [more]
tr|R4QQJ8|R4QQJ8_CUCME6.9e-5998.25Zinc finger CCCH domain-containing protein OS=Cucumis melo OX=3656 PE=2 SV=1[more]
tr|A0A2N9IKS7|A0A2N9IKS7_FAGSY1.1e-3267.23Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52602 PE=4 SV=1[more]
tr|A0A251NEY3|A0A251NEY3_PRUPE4.2e-3264.29Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G216200 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_UNG046330.1CsaV3_UNG046330.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_UNG046330Carg12262Silver-seed gourdcarcucB0046
CsaV3_UNG046330Carg13023Silver-seed gourdcarcucB0112
CsaV3_UNG046330Cla97C03G066180Watermelon (97103) v2cucwmbB350
CsaV3_UNG046330Bhi02G001603Wax gourdcucwgoB441
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_UNG046330CsaV3_1G040060Cucumber (Chinese Long) v3cuccucB033
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_UNG046330Cucurbita moschata (Rifu)cmocucB0139
CsaV3_UNG046330Cucurbita pepo (Zucchini)cpecucB0850
CsaV3_UNG046330Wild cucumber (PI 183967)cpicucB041
CsaV3_UNG046330Bottle gourd (USVL1VR-Ls)cuclsiB343
CsaV3_UNG046330Melon (DHL92) v3.5.1cucmeB349
CsaV3_UNG046330Melon (DHL92) v3.6.1cucmedB341
CsaV3_UNG046330Watermelon (Charleston Gray)cucwcgB359
CsaV3_UNG046330Watermelon (97103) v1cucwmB383
CsaV3_UNG046330Cucumber (Gy14) v1cgycucB449
CsaV3_UNG046330Cucurbita maxima (Rimu)cmacucB0154