CsaV3_7G031860 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G031860
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	pentatricopeptide repeat-containing protein At1g80880, mitochondrial
Location	chr7 : 20221283 .. 20224608 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTAGATTTTCCATTTTAGTTTGTCAAATAATTTTTTTTTTAAAAGTAAGTGAGAAAAACTAAAGGACTAAGAAATTTAATTCTACAACTATAACTTATGGTATATAAGTTAGACTTAAAATATATACGTAGGTATTCCTCTTTTGCACGGCCACTACTAAAAGGTTTATAAACACAATTGAGCTTCACTTTCCCCAATATATATATATTAAGGGATTGTAATTCAAATTTTACCGCGCAGCGAAACTCCCTCTCTGTATCTTCAGTCGTTTTTCATGGTAATCCATGGCAAGCCTTTCTTCTATTGCCAGAAGGCTCTGCAGAATCCATCCATTGCCATTCCATCATCTCCTTTATCTCAACCGTTTACGTATCCCCGATTCCCCCTTTCAGGCATTTCATCAAACATTTAGTCTGCATTCTTTCTTCGCTCGTCAATTCTCAGCTCTTCCATCTTTTTCTCAAAAACTTGGCGACCCATTTCTGTTTGACACAGGAAGATTCCAAAACTATCGCCAGAGTGACGCGTGTAATGCCCGATTCATCGAATTGTTCAAACGGGTCGCTCTTTTGCCATCGGAAGTGGAGGCTGTTGCTGCATTGGACGAGTTTGATGTCAAGGCAGATTTGGATTTGGTTTACTCGGCAATTTGGGTGTTGAGGGATGATTGGAAATCGTCCCTTCTAGCATTCAAATGGGGTGAGAAAGTGGGAGCCATTGATGAAGAGATTTGTAATTTGATGATATGGGTGTTGGGCAATCATAAGAAATTCAGTACTGCTTGGTCTTTGATCAGAGAATTGCACGGATCCTTGCTGAATTCGATGCAAGCGATGCTTGTCATGATTGATAGGTGAAGTTTATTTTCGCATATCTTCATTTATTCTACACTTGATTGTTGATATTCTGATATGCCATTTGTAACTATTGTCAAAGTCGTTTTGCATTTTGACTTTATTCGATAGCTTAGTTTATATGCTTAAGTGTAGAAAGCTAAGACGTATACTACATGACGGCATGCTATATTTTAAAAGTCTAGGAATGACACGACAAGGAAACTTTTATCAAAAGATCTTTTTTTAATGCATTCTGTTAATTGGTTTCTTACTGATTTATGTAGTAAATGAGAAAATGAAGGGAGATTACATCCATAGTTATCTTTTCGATTTATATGCTGCTAACAAGGAAGTTCCTGGTTTAAGGTATGCATATGCAAATGAGGCAAGTAAGGCTATTAAGACATTCCACATGATGGAGAAGTTCAGATTGACACCGGATCAAGAGGCTTTTCACGTGCTTCTCAATTCTCTCTGTAAATATGGGAATATCGAAGAAGCTGAAGAGTTTATGTTTGTAAACAAGAAGCTTTTTCCTTTGGGAACAGAAAGCTTTAATATTATTCTCAACGGTTGGTGCAATGTAACTGTTGATGTGTTTGAAGCAAAGAGAATTTGGAGAGAAATGTCTAAATGTTGCATTTTACCAGATTCAACTTCTTATACCCACATGATTTCCTGTTTTTCGAAGAATGGGAACCTTTTCGACTCGCTTAGATTCTATGATCAGATGAAGAAAAGGGATTGGATTCCAAGCGTCGAAGTCTATAATTCTTTAGCTTACGTGTTGACCCGGGAGAATTGCTTCAATGAAGCTCTCAAAATCCTTGAGAAAATAAAAGAAGTGGGCTTGCGGCCAGACTCCACTACATACAACTCACTTATAAGTCCTCTGTGTGAGGCGGGAAAGCTGGACGAAGCAAAAGATGTACTGACCATGATGACTGAGGACAATATCAGTCCGACGATCGAAACCTACCATTCTTTTATTCAGGCTGCAGATTCTAAAATGAGCTTTGAACTTCTTAAGCGGATGAGACAAGATGGTTTGGGTCCTACAGAGGGTACCTTTCTTATCATGTTTAATAAGTCATTTGAATTAGAAGAACCGGAGTATGCATTGAATGTGTGGGTAGAAATGAAGCGGTACGAGGTATTTCCGAGTTGTGAACATTACTCAGTCTTGATACAAGGCCTTGCAACATGTGGTCACTTAAAAAAGGCCAGGGAATTATATGACGAAATGATATTACATGGATTTATCGCACATCCAAAGATTAAAACGCTTCTGAAGGAACCAGATTTAGGTAGCATTGACGAAGCAAGGCAGCAAGTGAGACACAACAACAAAGGTAAGTTCATTCCTCATAGGAAAGGGAGAACGATGAGGTGGAAATCACATAAACAACGATCTAAAGGGGCTGCATCATTTGAATAGGTAATTTATCTGTATACGTGTTACTCGAATAAATTGAATCATATTCTATGTTCTGCTAGTATTGTATAGGTCCTATAGGAGATGAGCTAGATATCAATCTGATCATTCTGCTCGATACTCCTTTCACAATCTTTCAATCAGCACCCTTTAGTCCATAATTTTATGCTTGTGTAGAAAAAAATCATTAGAGGTTCATGGGTGCCTTCATGTGAGGGTTACAATTGAGGTTTTCGATTAGATCTCGTCAGGATGTGAACACAGTTCCACTTAAGTTAGAAATATACAAAATCCTTGGTATAAAAATAAGGAGAACTTCTTGTTAGGAATAGGATGAATCCTTGTCCTAACAAATTAATTATTCACTCTTCCATTGAATGCAGGATGACTTAATAATCTTGCAGCCCATATAAAAGTTAGATAGATTTCTGATTGAATGATGGGGGAGGTATTTTTTAAGATTGAGATTTAAATCTCTGATTTACTATTTGAACTATGTTTAAGTTGAGTAAGATCTTACATATTTGCTTTTTGGATGAACTGTTGACTGTTTGTCTTTTATCTGAATCCTTTGTCTGATAAGGAACAAGAACTCATTGTGGAAGCAGGTGAAAAAGCATTCCTTCCTTCGCTTTGGCACAAAGCTCGAAGAGAACACTCGCATGGGCTAGAGAAAAGATACGACATCGTTTTCCTTTTTTTCTTTTTCCTCTTTTGAAGGTATAAGCTGTTTGGCCTGGCAGTTGGATGATCGAGAAAGTTTAATTCTCAGTTGTCCTTTTTGTAGCTTCATTTGTTGGAATTGGCCACACTATAAAAGGTTATAAATTCTCACCAGAAGGGCAACCTTTTCAAGCATGGACACAGTTTTAAGGATTTTTCTTTTCATTGGAAAGATAATTAAGAGAATATTTCTTGTTTGTATAAATTAAAGTTGGGAAGTTTTTGTTTGGATCTTATAAATATGAACAAGTGTCAAAAAAACAAAAGATTAAATTAGAGTGAAAATATTTGAACTACATATCTATTGATTTTTAGCTTGAGCTAAAACTTT

mRNA sequence

ATGGCAAGCCTTTCTTCTATTGCCAGAAGGCTCTGCAGAATCCATCCATTGCCATTCCATCATCTCCTTTATCTCAACCGTTTACGTATCCCCGATTCCCCCTTTCAGGCATTTCATCAAACATTTAGTCTGCATTCTTTCTTCGCTCGTCAATTCTCAGCTCTTCCATCTTTTTCTCAAAAACTTGGCGACCCATTTCTGTTTGACACAGGAAGATTCCAAAACTATCGCCAGAGTGACGCGTGTAATGCCCGATTCATCGAATTGTTCAAACGGGTCGCTCTTTTGCCATCGGAAGTGGAGGCTGTTGCTGCATTGGACGAGTTTGATGTCAAGGCAGATTTGGATTTGGTTTACTCGGCAATTTGGGTGTTGAGGGATGATTGGAAATCGTCCCTTCTAGCATTCAAATGGGGTGAGAAAGTGGGAGCCATTGATGAAGAGATTTGTAATTTGATGATATGGGTGTTGGGCAATCATAAGAAATTCAGTACTGCTTGGTCTTTGATCAGAGAATTGCACGGATCCTTGCTGAATTCGATGCAAGCGATGCTTGTCATGATTGATAGGTATGCATATGCAAATGAGGCAAGTAAGGCTATTAAGACATTCCACATGATGGAGAAGTTCAGATTGACACCGGATCAAGAGGCTTTTCACGTGCTTCTCAATTCTCTCTGTAAATATGGGAATATCGAAGAAGCTGAAGAGTTTATGTTTGTAAACAAGAAGCTTTTTCCTTTGGGAACAGAAAGCTTTAATATTATTCTCAACGGTTGGTGCAATGTAACTGTTGATGTGTTTGAAGCAAAGAGAATTTGGAGAGAAATGTCTAAATGTTGCATTTTACCAGATTCAACTTCTTATACCCACATGATTTCCTGTTTTTCGAAGAATGGGAACCTTTTCGACTCGCTTAGATTCTATGATCAGATGAAGAAAAGGGATTGGATTCCAAGCGTCGAAGTCTATAATTCTTTAGCTTACGTGTTGACCCGGGAGAATTGCTTCAATGAAGCTCTCAAAATCCTTGAGAAAATAAAAGAAGTGGGCTTGCGGCCAGACTCCACTACATACAACTCACTTATAAGTCCTCTGTGTGAGGCGGGAAAGCTGGACGAAGCAAAAGATGTACTGACCATGATGACTGAGGACAATATCAGTCCGACGATCGAAACCTACCATTCTTTTATTCAGGCTGCAGATTCTAAAATGAGCTTTGAACTTCTTAAGCGGATGAGACAAGATGGTTTGGGTCCTACAGAGGGTACCTTTCTTATCATGTTTAATAAGTCATTTGAATTAGAAGAACCGGAGTATGCATTGAATGTGTGGGTAGAAATGAAGCGGTACGAGGTATTTCCGAGTTGTGAACATTACTCAGTCTTGATACAAGGCCTTGCAACATGTGGTCACTTAAAAAAGGCCAGGGAATTATATGACGAAATGATATTACATGGATTTATCGCACATCCAAAGATTAAAACGCTTCTGAAGGAACCAGATTTAGGTAGCATTGACGAAGCAAGGCAGCAAGTGAGACACAACAACAAAGGTAAGTTCATTCCTCATAGGAAAGGGAGAACGATGAGGTGGAAATCACATAAACAACGATCTAAAGGGGCTGCATCATTTGAATAG

Coding sequence (CDS)

ATGGCAAGCCTTTCTTCTATTGCCAGAAGGCTCTGCAGAATCCATCCATTGCCATTCCATCATCTCCTTTATCTCAACCGTTTACGTATCCCCGATTCCCCCTTTCAGGCATTTCATCAAACATTTAGTCTGCATTCTTTCTTCGCTCGTCAATTCTCAGCTCTTCCATCTTTTTCTCAAAAACTTGGCGACCCATTTCTGTTTGACACAGGAAGATTCCAAAACTATCGCCAGAGTGACGCGTGTAATGCCCGATTCATCGAATTGTTCAAACGGGTCGCTCTTTTGCCATCGGAAGTGGAGGCTGTTGCTGCATTGGACGAGTTTGATGTCAAGGCAGATTTGGATTTGGTTTACTCGGCAATTTGGGTGTTGAGGGATGATTGGAAATCGTCCCTTCTAGCATTCAAATGGGGTGAGAAAGTGGGAGCCATTGATGAAGAGATTTGTAATTTGATGATATGGGTGTTGGGCAATCATAAGAAATTCAGTACTGCTTGGTCTTTGATCAGAGAATTGCACGGATCCTTGCTGAATTCGATGCAAGCGATGCTTGTCATGATTGATAGGTATGCATATGCAAATGAGGCAAGTAAGGCTATTAAGACATTCCACATGATGGAGAAGTTCAGATTGACACCGGATCAAGAGGCTTTTCACGTGCTTCTCAATTCTCTCTGTAAATATGGGAATATCGAAGAAGCTGAAGAGTTTATGTTTGTAAACAAGAAGCTTTTTCCTTTGGGAACAGAAAGCTTTAATATTATTCTCAACGGTTGGTGCAATGTAACTGTTGATGTGTTTGAAGCAAAGAGAATTTGGAGAGAAATGTCTAAATGTTGCATTTTACCAGATTCAACTTCTTATACCCACATGATTTCCTGTTTTTCGAAGAATGGGAACCTTTTCGACTCGCTTAGATTCTATGATCAGATGAAGAAAAGGGATTGGATTCCAAGCGTCGAAGTCTATAATTCTTTAGCTTACGTGTTGACCCGGGAGAATTGCTTCAATGAAGCTCTCAAAATCCTTGAGAAAATAAAAGAAGTGGGCTTGCGGCCAGACTCCACTACATACAACTCACTTATAAGTCCTCTGTGTGAGGCGGGAAAGCTGGACGAAGCAAAAGATGTACTGACCATGATGACTGAGGACAATATCAGTCCGACGATCGAAACCTACCATTCTTTTATTCAGGCTGCAGATTCTAAAATGAGCTTTGAACTTCTTAAGCGGATGAGACAAGATGGTTTGGGTCCTACAGAGGGTACCTTTCTTATCATGTTTAATAAGTCATTTGAATTAGAAGAACCGGAGTATGCATTGAATGTGTGGGTAGAAATGAAGCGGTACGAGGTATTTCCGAGTTGTGAACATTACTCAGTCTTGATACAAGGCCTTGCAACATGTGGTCACTTAAAAAAGGCCAGGGAATTATATGACGAAATGATATTACATGGATTTATCGCACATCCAAAGATTAAAACGCTTCTGAAGGAACCAGATTTAGGTAGCATTGACGAAGCAAGGCAGCAAGTGAGACACAACAACAAAGGTAAGTTCATTCCTCATAGGAAAGGGAGAACGATGAGGTGGAAATCACATAAACAACGATCTAAAGGGGCTGCATCATTTGAATAG

Protein sequence

MASLSSIARRLCRIHPLPFHHLLYLNRLRIPDSPFQAFHQTFSLHSFFARQFSALPSFSQKLGDPFLFDTGRFQNYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDVKADLDLVYSAIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMIWVLGNHKKFSTAWSLIRELHGSLLNSMQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMFVNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNGNLFDSLRFYDQMKKRDWIPSVEVYNSLAYVLTRENCFNEALKILEKIKEVGLRPDSTTYNSLISPLCEAGKLDEAKDVLTMMTEDNISPTIETYHSFIQAADSKMSFELLKRMRQDGLGPTEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHLKKARELYDEMILHGFIAHPKIKTLLKEPDLGSIDEARQQVRHNNKGKFIPHRKGRTMRWKSHKQRSKGAASFE

Homology

[Close]

BLAST of CsaV3_7G031860 vs. NCBI nr
Match: XP_011659500.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g80880, mitochondrial [Cucumis sativus] >XP_011659501.1 PREDICTED: pentatricopeptide repeat-containing protein At1g80880, mitochondrial [Cucumis sativus] >KGN45215.1 hypothetical protein Csa_7G431960 [Cucumis sativus])

HSP 1 Score: 877.5 bits (2266), Expect = 2.4e-251
Identity = 546/546 (100.00%), Postives = 546/546 (100.00%), Query Frame = 0


Query: 1   MASLSSIARRLCRIHPLPFHHLLYLNRLRIPDSPFQAFHQTFSLHSFFARQFSALPSFSQ 60
           MASLSSIARRLCRIHPLPFHHLLYLNRLRIPDSPFQAFHQTFSLHSFFARQFSALPSFSQ
Sbjct: 1   MASLSSIARRLCRIHPLPFHHLLYLNRLRIPDSPFQAFHQTFSLHSFFARQFSALPSFSQ 60

Query: 61  KLGDPFLFDTGRFQNYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDVKADLDLVYS 120
           KLGDPFLFDTGRFQNYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDVKADLDLVYS
Sbjct: 61  KLGDPFLFDTGRFQNYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDVKADLDLVYS 120

Query: 121 AIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMIWVLGNHKKFSTAWSLIRELHGSLLNS 180
           AIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMIWVLGNHKKFSTAWSLIRELHGSLLNS
Sbjct: 121 AIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMIWVLGNHKKFSTAWSLIRELHGSLLNS 180

Query: 181 MQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMF 240
           MQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMF
Sbjct: 181 MQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMF 240

Query: 241 VNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNG 300
           VNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNG
Sbjct: 241 VNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNG 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADSKMSFELLKRMRQDGLGP 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADSKMSFELLKRMRQDGLGP
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADSKMSFELLKRMRQDGLGP 420

Query: 421 TEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHLKKARELY 480
           TEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHLKKARELY
Sbjct: 421 TEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHLKKARELY 480

Query: 481 DEMILHGFIAHPKIKTLLKEPDLGSIDEARQQVRHNNKGKFIPHRKGRTMRWKSHKQRSK 540
           DEMILHGFIAHPKIKTLLKEPDLGSIDEARQQVRHNNKGKFIPHRKGRTMRWKSHKQRSK
Sbjct: 481 DEMILHGFIAHPKIKTLLKEPDLGSIDEARQQVRHNNKGKFIPHRKGRTMRWKSHKQRSK 540

Query: 541 GAASFE 547
           GAASFE
Sbjct: 541 GAASFE 546

[Close]

BLAST of CsaV3_7G031860 vs. NCBI nr
Match: XP_008461183.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g80880, mitochondrial [Cucumis melo] >XP_016902675.1 PREDICTED: pentatricopeptide repeat-containing protein At1g80880, mitochondrial [Cucumis melo] >XP_016902676.1 PREDICTED: pentatricopeptide repeat-containing protein At1g80880, mitochondrial [Cucumis melo])

HSP 1 Score: 798.5 bits (2061), Expect = 1.4e-227
Identity = 511/546 (93.59%), Postives = 518/546 (94.87%), Query Frame = 0


Query: 1   MASLSSIARRLCRIHPLPFHHLLYLNRLRIPDSPFQAFHQTFSLHSFFARQFSALPSFSQ 60
           MA LSSIARRLCRIHPLPFHHLLYLNRL I DSPFQAF QT  L S FA QFSALPSFSQ
Sbjct: 1   MACLSSIARRLCRIHPLPFHHLLYLNRLSIRDSPFQAFRQTLCLRSLFAHQFSALPSFSQ 60

Query: 61  KLGDPFLFDTGRFQNYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDVKADLDLVYS 120
           K+GD F FDTGRF+NYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDV+AD DLVYS
Sbjct: 61  KVGDQFQFDTGRFKNYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDVQADSDLVYS 120

Query: 121 AIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMIWVLGNHKKFSTAWSLIRELHGSLLNS 180
           AIWVLRDDWKSS LAFKWGEK GAIDEEICNLMIWVLGNHKKFSTAW LIRELHGSLLNS
Sbjct: 121 AIWVLRDDWKSSFLAFKWGEKWGAIDEEICNLMIWVLGNHKKFSTAWCLIRELHGSLLNS 180

Query: 181 MQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMF 240
            QAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFH LLNSLCKYGNIEEAEEFMF
Sbjct: 181 RQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHALLNSLCKYGNIEEAEEFMF 240

Query: 241 VNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNG 300
           VNKKLFPL TESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNG
Sbjct: 241 VNKKLFPLETESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNG 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADSKMSFELLKRMRQDGLGP 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADSKMSFELLKRMRQDGLGP
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADSKMSFELLKRMRQDGLGP 420

Query: 421 TEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHLKKARELY 480
            E TFLIMFNKSFELE+PEYALN WVEMKRY+VFPS EHYSVLIQGLATCGHLKKARELY
Sbjct: 421 IEVTFLIMFNKSFELEQPEYALNAWVEMKRYKVFPSSEHYSVLIQGLATCGHLKKARELY 480

Query: 481 DEMILHGFIAHPKIKTLLKEPDLGSIDEARQQVRHNNKGKFIPHRKGRTMRWKSHKQRSK 540
           DEMILHGFIAHPKIKTLLKEPD GSIDEARQQVRHN KGKF+ HRKG TMRWKSHKQ+SK
Sbjct: 481 DEMILHGFIAHPKIKTLLKEPDSGSIDEARQQVRHNKKGKFLSHRKGSTMRWKSHKQQSK 540

Query: 541 GAASFE 547
             ASFE
Sbjct: 541 RDASFE 546

[Close]

BLAST of CsaV3_7G031860 vs. NCBI nr
Match: XP_023547792.1 (pentatricopeptide repeat-containing protein At1g80880, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023547793.1 pentatricopeptide repeat-containing protein At1g80880, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 670.2 bits (1728), Expect = 5.8e-189
Identity = 452/546 (82.78%), Postives = 484/546 (88.64%), Query Frame = 0


Query: 1   MASLSSIARRLCRIHPLPFHHLLYLNRLRIPDSPFQAFHQTFSLHSFFARQFSALPSFSQ 60
           MA LSSIAR L R  PLPF  LL L   +IPDSPFQAFHQT  L S  ARQFSALP  SQ
Sbjct: 1   MACLSSIARGLSRNSPLPFRQLLQLINFQIPDSPFQAFHQTLHLPSQSARQFSALPFCSQ 60

Query: 61  KLGDPFLFDTGRFQNYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDVKADLDLVYS 120
           K+  PF FDT RFQN+R +DA +A+F+EL KR A LPSEVEA+AAL EFDV+AD +LVYS
Sbjct: 61  KVAHPFHFDTVRFQNHRPNDARSAQFVELLKRAARLPSEVEAIAALGEFDVQADPNLVYS 120

Query: 121 AIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMIWVLGNHKKFSTAWSLIRELHGSLLNS 180
           AIWVLRDDWKSS LAFKWGEK G+IDEEICNLMIWVLGNHKKFSTAW LIRE HGSLLNS
Sbjct: 121 AIWVLRDDWKSSFLAFKWGEKWGSIDEEICNLMIWVLGNHKKFSTAWCLIREFHGSLLNS 180

Query: 181 MQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMF 240
            QAMLVMIDRYA+ANEASKAIKTFHMMEKFRLTPDQEAFH LLNSLCKYGNIEEAEEFM 
Sbjct: 181 RQAMLVMIDRYAHANEASKAIKTFHMMEKFRLTPDQEAFHALLNSLCKYGNIEEAEEFML 240

Query: 241 VNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNG 300
           VNKKLFPL TESFNIILNGWCNV+VDVFEAKRIWREMSKCCILPDSTSYT MISCFS+ G
Sbjct: 241 VNKKLFPLETESFNIILNGWCNVSVDVFEAKRIWREMSKCCILPDSTSYTLMISCFSRTG 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADSKMSFELLKRMRQDGLGP 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ADS+ SFELLK+MRQ+GLGP
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADSETSFELLKQMRQNGLGP 420

Query: 421 TEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHLKKARELY 480
           TE TF+IMFNKSFELE+P+YAL  W EMKRYE+ P+ EHY+VL+QGLAT G LK+ARELY
Sbjct: 421 TEATFVIMFNKSFELEQPDYALKAWAEMKRYEISPNSEHYAVLVQGLATYGLLKQARELY 480

Query: 481 DEMILHGFIAHPKIKTLLKEPDLGSIDEARQQVRHNNKGKFIPHRKGRTMRWKSHKQRSK 540
           D+M  HG+I HPKIK L+KEP+L SI+EA QQVRHN KGKF  HRKG  MRWKSHKQ+S+
Sbjct: 481 DQMTSHGYILHPKIKMLVKEPELRSIEEATQQVRHNKKGKFF-HRKGSMMRWKSHKQQSR 540

Query: 541 GAASFE 547
             ASFE
Sbjct: 541 DDASFE 545

[Close]

BLAST of CsaV3_7G031860 vs. NCBI nr
Match: XP_022992478.1 (pentatricopeptide repeat-containing protein At1g80880, mitochondrial [Cucurbita maxima])

HSP 1 Score: 664.1 bits (1712), Expect = 4.2e-187
Identity = 451/546 (82.60%), Postives = 482/546 (88.28%), Query Frame = 0


Query: 1   MASLSSIARRLCRIHPLPFHHLLYLNRLRIPDSPFQAFHQTFSLHSFFARQFSALPSFSQ 60
           MA LSSIAR L R  PLPF  LL L   +IP SP QAFHQT  L S  ARQFSALP  SQ
Sbjct: 1   MACLSSIARGLSRNTPLPFRQLLQLINFQIPHSPSQAFHQTLLLPSQSARQFSALPFCSQ 60

Query: 61  KLGDPFLFDTGRFQNYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDVKADLDLVYS 120
           K+  PF FDT RFQN+RQ+DA +A+F+EL KR A LPSEVEA+AAL EFDV+AD +LVYS
Sbjct: 61  KVAHPFHFDTLRFQNHRQNDARSAQFVELLKRAARLPSEVEAIAALGEFDVQADPNLVYS 120

Query: 121 AIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMIWVLGNHKKFSTAWSLIRELHGSLLNS 180
           AIWVLRDDWKSS LAFKWGEK G+IDEEICNLMIWVLGNHKKFSTAW LIRE HGSLLNS
Sbjct: 121 AIWVLRDDWKSSFLAFKWGEKWGSIDEEICNLMIWVLGNHKKFSTAWCLIREFHGSLLNS 180

Query: 181 MQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMF 240
            QAM VMIDRYA+ANEASKAIKTFHMMEKFRLTPDQEAFH LLNSLCKYGNIEEAEEFM 
Sbjct: 181 RQAMHVMIDRYAHANEASKAIKTFHMMEKFRLTPDQEAFHALLNSLCKYGNIEEAEEFML 240

Query: 241 VNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNG 300
           VNKKLFPL TESFNIILNGWCNV+VDVFEAKRIWREMSKCCILPDSTSYT MISCFS+ G
Sbjct: 241 VNKKLFPLETESFNIILNGWCNVSVDVFEAKRIWREMSKCCILPDSTSYTLMISCFSRTG 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADSKMSFELLKRMRQDGLGP 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ADS+MSFELLK+MRQ+GLGP
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADSEMSFELLKQMRQNGLGP 420

Query: 421 TEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHLKKARELY 480
           TE TF+IMFNKSFELE+P+YAL  W EMKRYE+ P+ EHY VLIQGLAT G LK+ARELY
Sbjct: 421 TEATFVIMFNKSFELEQPDYALKAWEEMKRYEILPNSEHYEVLIQGLATYGLLKQARELY 480

Query: 481 DEMILHGFIAHPKIKTLLKEPDLGSIDEARQQVRHNNKGKFIPHRKGRTMRWKSHKQRSK 540
           D+M  HGFI HPKIK L+K+P+L SI+E+ QQVRHN KGKF  HRKG  MRWKSHKQ+S+
Sbjct: 481 DQMTSHGFILHPKIKMLVKQPELRSIEESTQQVRHNKKGKFF-HRKGSMMRWKSHKQQSR 540

Query: 541 GAASFE 547
             ASFE
Sbjct: 541 DDASFE 545

[Close]

BLAST of CsaV3_7G031860 vs. NCBI nr
Match: XP_022953169.1 (pentatricopeptide repeat-containing protein At1g80880, mitochondrial [Cucurbita moschata] >XP_022953170.1 pentatricopeptide repeat-containing protein At1g80880, mitochondrial [Cucurbita moschata])

HSP 1 Score: 663.7 bits (1711), Expect = 5.4e-187
Identity = 451/546 (82.60%), Postives = 481/546 (88.10%), Query Frame = 0


Query: 1   MASLSSIARRLCRIHPLPFHHLLYLNRLRIPDSPFQAFHQTFSLHSFFARQFSALPSFSQ 60
           MA LSSIAR L R  PLPF  LL L   +IPDSP QAFHQT  L S  ARQFSALP  SQ
Sbjct: 1   MACLSSIARGLSRNTPLPFRQLLQLISFKIPDSPSQAFHQTLLLPSQSARQFSALPFCSQ 60

Query: 61  KLGDPFLFDTGRFQNYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDVKADLDLVYS 120
           K+  PF FDT RFQN+R +DA +A F+EL KR A LPSEVEA+AAL EFDV+AD +LVYS
Sbjct: 61  KVAHPFHFDTVRFQNHRPNDARSAEFVELLKRAARLPSEVEAIAALGEFDVQADSNLVYS 120

Query: 121 AIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMIWVLGNHKKFSTAWSLIRELHGSLLNS 180
           AIWVLRDDWKSS LAFKWGEK G+IDEEICNLMIWVLGNHKKFSTAW LIRE HGSLLNS
Sbjct: 121 AIWVLRDDWKSSFLAFKWGEKWGSIDEEICNLMIWVLGNHKKFSTAWCLIREFHGSLLNS 180

Query: 181 MQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMF 240
            QAMLVMIDRYA+ANEASKAIKTFHMMEKFRLTPDQEAFH LLNSLCKYGNIEEAEEFM 
Sbjct: 181 RQAMLVMIDRYAHANEASKAIKTFHMMEKFRLTPDQEAFHALLNSLCKYGNIEEAEEFML 240

Query: 241 VNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNG 300
           VNKKLFPL TESFNIILNGWCNV+VDVFEAKRIWREMSKCCILPDSTSYT MISCFS+ G
Sbjct: 241 VNKKLFPLETESFNIILNGWCNVSVDVFEAKRIWREMSKCCILPDSTSYTLMISCFSRTG 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADSKMSFELLKRMRQDGLGP 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ADS+MSFELLK++RQ+GLGP
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADSEMSFELLKQIRQNGLGP 420

Query: 421 TEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHLKKARELY 480
           TE TF+IMFNKSFELE+P+YAL  W EMKRYE+ P+ EHY+VLIQGLAT G LK+ARELY
Sbjct: 421 TEATFIIMFNKSFELEQPDYALKAWEEMKRYEISPNSEHYAVLIQGLATYGLLKQARELY 480

Query: 481 DEMILHGFIAHPKIKTLLKEPDLGSIDEARQQVRHNNKGKFIPHRKGRTMRWKSHKQRSK 540
           D+M  HGFI HPKIK L+KEP+L SI+EA QQV HN KGKF  HRKG  MRWKSHKQ+S+
Sbjct: 481 DQMTSHGFILHPKIKMLVKEPELRSIEEATQQVTHNKKGKFF-HRKGSMMRWKSHKQQSR 540

Query: 541 GAASFE 547
             AS E
Sbjct: 541 DDASIE 545

[Close]

BLAST of CsaV3_7G031860 vs. TAIR10
Match: AT1G80880.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 298.1 bits (762), Expect = 1.1e-80
Identity = 266/477 (55.77%), Postives = 337/477 (70.65%), Query Frame = 0


Query: 37  AFHQTFSLHSFFARQFSALPSF--SQKLGDPFLFDTGRFQNYRQSDACNARFIELFKRVA 96
           AFH+   +HS   +  S LP F  S +     + +T    N           I+L ++V+
Sbjct: 47  AFHRAGHVHS---QVLSYLPHFASSNRFSTKTISETFDI-NLTALAPLEKGLIDLIRQVS 106

Query: 97  LLPSEVEAVAALDEFDVKADLDLVYSAIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMI 156
            L SE +A+A+L++     + D  YS IW LRD+W+ + LAFKWGEK G  D++ C+LMI
Sbjct: 107 ELESEADAMASLEDSSFDLNHDSFYSLIWELRDEWRLAFLAFKWGEKRGCDDQKSCDLMI 166

Query: 157 WVLGNHKKFSTAWSLIRELHGSLLNSMQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTP 216
           WVLGNH+KF+ AW LIR++     ++ +AM +M+DRYA AN+ S+AI+TF +M+KF+ TP
Sbjct: 167 WVLGNHQKFNIAWCLIRDMFNVSKDTRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHTP 226

Query: 217 DQEAFHVLLNSLCKYGNIEEAEEFMFVNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIW 276
             EAF  LL +LC++G+IE+AEEFM  +KKLFP+  E FN+ILNGWCN+  DV EAKRIW
Sbjct: 227 YDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIW 286

Query: 277 REMSKCCILPDSTSYTHMISCFSKNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 336
           REM   CI P+  SY+HMISCFSK G   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 287 REMGNYCITPNKDSYSHMISCFSKVGNLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 346

Query: 337 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 396
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 347 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 406

Query: 397 XXXXXAADSKMSFELLKRMRQDGLGPTEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVF 456
           XXXXX                   GPTE TFL++  K F+ ++PE AL +W EM R+E+ 
Sbjct: 407 XXXXXXXXXXXXXXXXXXXXXXXXGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIV 466

Query: 457 PSCEHYSVLIQGLATCGHLKKARELYDEMILHGFIAHPKIKTLLKEPDLGSIDEARQ 512
            +   Y   IQGL +CG L+KARE+Y EM   GF+ +P ++ LL+E  +  + ++++
Sbjct: 467 ANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFVGNPMLQKLLEEQKVKGVRKSKR 519

[Close]

BLAST of CsaV3_7G031860 vs. TAIR10
Match: AT5G15010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 155.6 bits (392), Expect = 8.7e-38
Identity = 81/200 (40.50%), Postives = 119/200 (59.50%), Query Frame = 0


Query: 106 LDEFDVKADLDLVYSAIWVLRDDWKSSLLAFKWGEKVGAIDEEI--CNLMIWVLGNHKKF 165
           L+E DVK   +LV   +  +R+DW+++   F W  K       +   + MI +LG  +KF
Sbjct: 118 LEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKF 177

Query: 166 STAWSLI---RELHGSLLNSMQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFH 225
            TAW+LI   R+   SL+NS Q +L+MI +Y   ++  KAI TFH  ++F+L    + F 
Sbjct: 178 DTAWTLIDEMRKFSPSLVNS-QTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQ 237

Query: 226 VLLNSLCKYGNIEEAEEFMFVNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKC 285
            LL++LC+Y N+ +A   +F NK  +P   +SFNI+LNGWCNV     EA+R+W EM   
Sbjct: 238 SLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNV 297

Query: 286 CILPDSTSYTHMISCFSKNG 301
            +  D  SY+ MISC+SK G
Sbjct: 298 GVKHDVVSYSSMISCYSKGG 316

[Close]

BLAST of CsaV3_7G031860 vs. TAIR10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 77.8 bits (190), Expect = 2.3e-14
Identity = 41/134 (30.60%), Postives = 71/134 (52.99%), Query Frame = 0


Query: 148 EICNLMIWVLGNHKKFSTAWSLIREL--HGSLLNSMQAMLVMIDRYAYANEASKAIKTFH 207
           E+   M+ +L   ++F   W LI E+      L   +  +V++ R+A A+   KAI+   
Sbjct: 148 EVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLD 207

Query: 208 MMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMFVNKKLFPLGTESFNIILNGWCNVTV 267
            M KF   PD+  F  LL++LCK+G++++A +     +  FP+    F  +L GWC V  
Sbjct: 208 EMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVG- 267

Query: 268 DVFEAKRIWREMSK 280
            + EAK +  +M++
Sbjct: 268 KMMEAKYVLVQMNE 280

[Close]

BLAST of CsaV3_7G031860 vs. TAIR10
Match: AT5G11310.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 70.1 bits (170), Expect = 4.8e-12
Identity = 54/189 (28.57%), Postives = 91/189 (48.15%), Query Frame = 0


Query: 104 AALDEFDVKADLDLVYSAIWVLRDDWKSSLLAFKWGE-KVG-AIDEEICNLMIWVLGNHK 163
           +ALDE  ++  ++LV++    L          FKW E K G  +   + + ++  L   +
Sbjct: 90  SALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAR 149

Query: 164 KFSTAWSL----IRELHGSLLNSMQAMLVMIDRYAYANEASKAIKTFHMMEKF----RLT 223
           +F  AWSL    +R   GS L S    +V+I RYA A    +AI+ F     +    +  
Sbjct: 150 EFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSA 209

Query: 224 PDQEAFHVLLNSLCKYGNIEEAEEFM-----FVNKKLFPLGTESFNIILNGWCNVTVDVF 278
            +     VLL++LCK G++ EA  ++      ++    P     FNI+LNGW   +  + 
Sbjct: 210 TELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVP-SVRIFNILLNGWFR-SRKLK 269

[Close]

BLAST of CsaV3_7G031860 vs. TAIR10
Match: AT1G20300.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 67.4 bits (163), Expect = 3.1e-11
Identity = 42/150 (28.00%), Postives = 74/150 (49.33%), Query Frame = 0


Query: 132 SLLAFKWGEKVGAIDEEI---CNLMIWVLGNHKKFSTAWSLIRELHGSLLN-SMQAMLVM 191
           SL  F W       D +     N MI + G  ++F  AW LI  +    +  S++   ++
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192

Query: 192 IDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMFVNKKLFP 251
           I RY  A  AS+A+  F+ ME +   PD+ AF +++++L +     EA+ F    K  F 
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFE 252

Query: 252 LGTESFNIILNGWCNVTVDVFEAKRIWREM 278
                +  ++ GWC    ++ EA+++++EM
Sbjct: 253 PDVIVYTNLVRGWCRAG-EISEAEKVFKEM 281

[Close]

BLAST of CsaV3_7G031860 vs. Swiss-Prot
Match: sp|Q9SAH2|PP137_ARATH (Pentatricopeptide repeat-containing protein At1g80880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80880 PE=2 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.0e-79
Identity = 266/477 (55.77%), Postives = 337/477 (70.65%), Query Frame = 0


Query: 37  AFHQTFSLHSFFARQFSALPSF--SQKLGDPFLFDTGRFQNYRQSDACNARFIELFKRVA 96
           AFH+   +HS   +  S LP F  S +     + +T    N           I+L ++V+
Sbjct: 47  AFHRAGHVHS---QVLSYLPHFASSNRFSTKTISETFDI-NLTALAPLEKGLIDLIRQVS 106

Query: 97  LLPSEVEAVAALDEFDVKADLDLVYSAIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMI 156
            L SE +A+A+L++     + D  YS IW LRD+W+ + LAFKWGEK G  D++ C+LMI
Sbjct: 107 ELESEADAMASLEDSSFDLNHDSFYSLIWELRDEWRLAFLAFKWGEKRGCDDQKSCDLMI 166

Query: 157 WVLGNHKKFSTAWSLIRELHGSLLNSMQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTP 216
           WVLGNH+KF+ AW LIR++     ++ +AM +M+DRYA AN+ S+AI+TF +M+KF+ TP
Sbjct: 167 WVLGNHQKFNIAWCLIRDMFNVSKDTRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHTP 226

Query: 217 DQEAFHVLLNSLCKYGNIEEAEEFMFVNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIW 276
             EAF  LL +LC++G+IE+AEEFM  +KKLFP+  E FN+ILNGWCN+  DV EAKRIW
Sbjct: 227 YDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIW 286

Query: 277 REMSKCCILPDSTSYTHMISCFSKNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 336
           REM   CI P+  SY+HMISCFSK G   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 287 REMGNYCITPNKDSYSHMISCFSKVGNLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 346

Query: 337 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 396
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 347 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 406

Query: 397 XXXXXAADSKMSFELLKRMRQDGLGPTEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVF 456
           XXXXX                   GPTE TFL++  K F+ ++PE AL +W EM R+E+ 
Sbjct: 407 XXXXXXXXXXXXXXXXXXXXXXXXGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIV 466

Query: 457 PSCEHYSVLIQGLATCGHLKKARELYDEMILHGFIAHPKIKTLLKEPDLGSIDEARQ 512
            +   Y   IQGL +CG L+KARE+Y EM   GF+ +P ++ LL+E  +  + ++++
Sbjct: 467 ANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFVGNPMLQKLLEEQKVKGVRKSKR 519

[Close]

BLAST of CsaV3_7G031860 vs. Swiss-Prot
Match: sp|Q9LFQ4|PP383_ARATH (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 1.6e-36
Identity = 81/200 (40.50%), Postives = 119/200 (59.50%), Query Frame = 0


Query: 106 LDEFDVKADLDLVYSAIWVLRDDWKSSLLAFKWGEKVGAIDEEI--CNLMIWVLGNHKKF 165
           L+E DVK   +LV   +  +R+DW+++   F W  K       +   + MI +LG  +KF
Sbjct: 118 LEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKF 177

Query: 166 STAWSLI---RELHGSLLNSMQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFH 225
            TAW+LI   R+   SL+NS Q +L+MI +Y   ++  KAI TFH  ++F+L    + F 
Sbjct: 178 DTAWTLIDEMRKFSPSLVNS-QTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQ 237

Query: 226 VLLNSLCKYGNIEEAEEFMFVNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKC 285
            LL++LC+Y N+ +A   +F NK  +P   +SFNI+LNGWCNV     EA+R+W EM   
Sbjct: 238 SLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNV 297

Query: 286 CILPDSTSYTHMISCFSKNG 301
            +  D  SY+ MISC+SK G
Sbjct: 298 GVKHDVVSYSSMISCYSKGG 316

[Close]

BLAST of CsaV3_7G031860 vs. Swiss-Prot
Match: sp|Q9FH87|PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 4.2e-13
Identity = 41/134 (30.60%), Postives = 71/134 (52.99%), Query Frame = 0


Query: 148 EICNLMIWVLGNHKKFSTAWSLIREL--HGSLLNSMQAMLVMIDRYAYANEASKAIKTFH 207
           E+   M+ +L   ++F   W LI E+      L   +  +V++ R+A A+   KAI+   
Sbjct: 148 EVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLD 207

Query: 208 MMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMFVNKKLFPLGTESFNIILNGWCNVTV 267
            M KF   PD+  F  LL++LCK+G++++A +     +  FP+    F  +L GWC V  
Sbjct: 208 EMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVG- 267

Query: 268 DVFEAKRIWREMSK 280
            + EAK +  +M++
Sbjct: 268 KMMEAKYVLVQMNE 280

[Close]

BLAST of CsaV3_7G031860 vs. Swiss-Prot
Match: sp|Q9LFM6|PP375_ARATH (Pentatricopeptide repeat-containing protein At5g11310, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g11310 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 8.7e-11
Identity = 54/189 (28.57%), Postives = 91/189 (48.15%), Query Frame = 0


Query: 104 AALDEFDVKADLDLVYSAIWVLRDDWKSSLLAFKWGE-KVG-AIDEEICNLMIWVLGNHK 163
           +ALDE  ++  ++LV++    L          FKW E K G  +   + + ++  L   +
Sbjct: 90  SALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAR 149

Query: 164 KFSTAWSL----IRELHGSLLNSMQAMLVMIDRYAYANEASKAIKTFHMMEKF----RLT 223
           +F  AWSL    +R   GS L S    +V+I RYA A    +AI+ F     +    +  
Sbjct: 150 EFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSA 209

Query: 224 PDQEAFHVLLNSLCKYGNIEEAEEFM-----FVNKKLFPLGTESFNIILNGWCNVTVDVF 278
            +     VLL++LCK G++ EA  ++      ++    P     FNI+LNGW   +  + 
Sbjct: 210 TELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVP-SVRIFNILLNGWFR-SRKLK 269

[Close]

BLAST of CsaV3_7G031860 vs. Swiss-Prot
Match: sp|Q9LN22|PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g20300 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 5.6e-10
Identity = 42/150 (28.00%), Postives = 74/150 (49.33%), Query Frame = 0


Query: 132 SLLAFKWGEKVGAIDEEI---CNLMIWVLGNHKKFSTAWSLIRELHGSLLN-SMQAMLVM 191
           SL  F W       D +     N MI + G  ++F  AW LI  +    +  S++   ++
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192

Query: 192 IDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMFVNKKLFP 251
           I RY  A  AS+A+  F+ ME +   PD+ AF +++++L +     EA+ F    K  F 
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFE 252

Query: 252 LGTESFNIILNGWCNVTVDVFEAKRIWREM 278
                +  ++ GWC    ++ EA+++++EM
Sbjct: 253 PDVIVYTNLVRGWCRAG-EISEAEKVFKEM 281

[Close]

BLAST of CsaV3_7G031860 vs. TrEMBL
Match: tr|A0A0A0K678|A0A0A0K678_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G431960 PE=4 SV=1)

HSP 1 Score: 877.5 bits (2266), Expect = 1.6e-251
Identity = 546/546 (100.00%), Postives = 546/546 (100.00%), Query Frame = 0


Query: 1   MASLSSIARRLCRIHPLPFHHLLYLNRLRIPDSPFQAFHQTFSLHSFFARQFSALPSFSQ 60
           MASLSSIARRLCRIHPLPFHHLLYLNRLRIPDSPFQAFHQTFSLHSFFARQFSALPSFSQ
Sbjct: 1   MASLSSIARRLCRIHPLPFHHLLYLNRLRIPDSPFQAFHQTFSLHSFFARQFSALPSFSQ 60

Query: 61  KLGDPFLFDTGRFQNYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDVKADLDLVYS 120
           KLGDPFLFDTGRFQNYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDVKADLDLVYS
Sbjct: 61  KLGDPFLFDTGRFQNYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDVKADLDLVYS 120

Query: 121 AIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMIWVLGNHKKFSTAWSLIRELHGSLLNS 180
           AIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMIWVLGNHKKFSTAWSLIRELHGSLLNS
Sbjct: 121 AIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMIWVLGNHKKFSTAWSLIRELHGSLLNS 180

Query: 181 MQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMF 240
           MQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMF
Sbjct: 181 MQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMF 240

Query: 241 VNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNG 300
           VNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNG
Sbjct: 241 VNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNG 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADSKMSFELLKRMRQDGLGP 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADSKMSFELLKRMRQDGLGP
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADSKMSFELLKRMRQDGLGP 420

Query: 421 TEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHLKKARELY 480
           TEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHLKKARELY
Sbjct: 421 TEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHLKKARELY 480

Query: 481 DEMILHGFIAHPKIKTLLKEPDLGSIDEARQQVRHNNKGKFIPHRKGRTMRWKSHKQRSK 540
           DEMILHGFIAHPKIKTLLKEPDLGSIDEARQQVRHNNKGKFIPHRKGRTMRWKSHKQRSK
Sbjct: 481 DEMILHGFIAHPKIKTLLKEPDLGSIDEARQQVRHNNKGKFIPHRKGRTMRWKSHKQRSK 540

Query: 541 GAASFE 547
           GAASFE
Sbjct: 541 GAASFE 546

[Close]

BLAST of CsaV3_7G031860 vs. TrEMBL
Match: tr|A0A1S3CE43|A0A1S3CE43_CUCME (pentatricopeptide repeat-containing protein At1g80880, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499843 PE=4 SV=1)

HSP 1 Score: 798.5 bits (2061), Expect = 9.4e-228
Identity = 511/546 (93.59%), Postives = 518/546 (94.87%), Query Frame = 0


Query: 1   MASLSSIARRLCRIHPLPFHHLLYLNRLRIPDSPFQAFHQTFSLHSFFARQFSALPSFSQ 60
           MA LSSIARRLCRIHPLPFHHLLYLNRL I DSPFQAF QT  L S FA QFSALPSFSQ
Sbjct: 1   MACLSSIARRLCRIHPLPFHHLLYLNRLSIRDSPFQAFRQTLCLRSLFAHQFSALPSFSQ 60

Query: 61  KLGDPFLFDTGRFQNYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDVKADLDLVYS 120
           K+GD F FDTGRF+NYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDV+AD DLVYS
Sbjct: 61  KVGDQFQFDTGRFKNYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDVQADSDLVYS 120

Query: 121 AIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMIWVLGNHKKFSTAWSLIRELHGSLLNS 180
           AIWVLRDDWKSS LAFKWGEK GAIDEEICNLMIWVLGNHKKFSTAW LIRELHGSLLNS
Sbjct: 121 AIWVLRDDWKSSFLAFKWGEKWGAIDEEICNLMIWVLGNHKKFSTAWCLIRELHGSLLNS 180

Query: 181 MQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMF 240
            QAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFH LLNSLCKYGNIEEAEEFMF
Sbjct: 181 RQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHALLNSLCKYGNIEEAEEFMF 240

Query: 241 VNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNG 300
           VNKKLFPL TESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNG
Sbjct: 241 VNKKLFPLETESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNG 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADSKMSFELLKRMRQDGLGP 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADSKMSFELLKRMRQDGLGP
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADSKMSFELLKRMRQDGLGP 420

Query: 421 TEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHLKKARELY 480
            E TFLIMFNKSFELE+PEYALN WVEMKRY+VFPS EHYSVLIQGLATCGHLKKARELY
Sbjct: 421 IEVTFLIMFNKSFELEQPEYALNAWVEMKRYKVFPSSEHYSVLIQGLATCGHLKKARELY 480

Query: 481 DEMILHGFIAHPKIKTLLKEPDLGSIDEARQQVRHNNKGKFIPHRKGRTMRWKSHKQRSK 540
           DEMILHGFIAHPKIKTLLKEPD GSIDEARQQVRHN KGKF+ HRKG TMRWKSHKQ+SK
Sbjct: 481 DEMILHGFIAHPKIKTLLKEPDSGSIDEARQQVRHNKKGKFLSHRKGSTMRWKSHKQQSK 540

Query: 541 GAASFE 547
             ASFE
Sbjct: 541 RDASFE 546

[Close]

BLAST of CsaV3_7G031860 vs. TrEMBL
Match: tr|A0A2I4GIU2|A0A2I4GIU2_9ROSI (pentatricopeptide repeat-containing protein At1g80880, mitochondrial OS=Juglans regia OX=51240 GN=LOC109008254 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 4.5e-121
Identity = 349/558 (62.54%), Postives = 421/558 (75.45%), Query Frame = 0


Query: 1   MASLSSIARRLCRIHP---LPFHHLLYLNRLRIPDSP-----------FQAFHQTFSLHS 60
           MA L S+ARRL R  P   LP   L  + R   P              F+AFHQT  L S
Sbjct: 1   MAHLPSLARRLPRTDPHFFLPLSMLHPITRSPCPSPATTILQPFLRYLFRAFHQTRHLPS 60

Query: 61  FFARQFSALPSFS-QKLGDPFLFDTGRFQ-NYRQSDACNARFIELFKRVALLPSEVEAVA 120
              R+FS    FS Q    PF FD  +F+  +   D    RF+E+ + V+  PSE +A+ 
Sbjct: 61  PQTRRFSTFQPFSAQNYHYPFDFDNYKFKVTHGTHDPGLPRFLEMLRGVSQCPSEAKAIE 120

Query: 121 ALDEFDVKADLDLVYSAIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMIWVLGNHKKFS 180
           +LDE  ++A+ ++V SAIW  R++W+ + LAFKWGEK G  DE+ C LMIWVLGNH+KF+
Sbjct: 121 SLDESGIEANREIVCSAIWESREEWRLAFLAFKWGEKWGCTDEKACYLMIWVLGNHRKFN 180

Query: 181 TAWSLIREL--HGSLLNSMQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVL 240
            AW LIR++  H S +++ +AML+MIDRYA AN+  KAI+TFH+ME FRLTPDQEAFH +
Sbjct: 181 IAWCLIRDMHTHRSKMDTRRAMLIMIDRYASANDPCKAIRTFHVMETFRLTPDQEAFHTV 240

Query: 241 LNSLCKYGNIEEAEEFMFVNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKCCI 300
           L +LCKYGNIEEAEEFMFVNKKLFPL TE FNIILN WCNV++DVFEAKR+WREMSKCCI
Sbjct: 241 LKALCKYGNIEEAEEFMFVNKKLFPLETEGFNIILNAWCNVSLDVFEAKRVWREMSKCCI 300

Query: 301 LPDSTSYTHMISCFSKNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
            PD+TSYT MISCFSK G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 TPDATSYTLMISCFSKVGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAD 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +A 
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAG 420

Query: 421 SKMSFELLKRMRQDGLGPTEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSV 480
            + + E+L RM++ GLGPT  TFLI+  K F+L +P++AL V++EMK+YE+ P+  HYSV
Sbjct: 421 FEGTLEVLNRMKKAGLGPTGDTFLIIIGKFFKLGQPDHALKVFMEMKQYEIVPNSLHYSV 480

Query: 481 LIQGLATCGHLKKARELYDEMILHGFIAHPKIKTLLKEPDLGSIDEARQQVRHNNKGKFI 540
           L+QGLATCG L KARE Y EM  +GF+  PK+K LLKEP   S+ E ++QV+  N+ +  
Sbjct: 481 LVQGLATCGWLIKAREFYAEMRSNGFLEDPKLKKLLKEPVRCSVHEGKRQVQRVNRDERA 540

[Close]

BLAST of CsaV3_7G031860 vs. TrEMBL
Match: tr|A0A2P4LEF9|A0A2P4LEF9_QUESU (Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_34421 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 8.5e-120
Identity = 337/547 (61.61%), Postives = 415/547 (75.87%), Query Frame = 0


Query: 4   LSSIARRLCRIHPLPF---HHLLYLNRLRIPDSP------FQAFHQTFSLHSFFARQFSA 63
           L S+ARRL R  P  F   H +  L+    P S       F A HQT  + +     FS 
Sbjct: 6   LPSLARRLQRTPPHLFLLSHIIPSLSSSPSPSSQLPSHFLFHALHQTSLIPTLQTHHFST 65

Query: 64  LPSFS-QKLGDPFLFDTGRFQNYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDVKA 123
              FS   L DPF F+  RF+ Y   D    RF+EL + V   PS+ EA+ +LD+  ++ 
Sbjct: 66  FQPFSAHNLDDPFDFNHPRFRTYDPHDRFLLRFLELLREVPHYPSKAEAMTSLDDSGIEV 125

Query: 124 DLDLVYSAIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMIWVLGNHKKFSTAWSLIREL 183
           + +++YSA+W LR++W+ +LLAF+W E+ G  DE+  NLMIWVLGNH+KF+TAW LIR++
Sbjct: 126 NSEMIYSAVWELREEWRLALLAFRWSEQWGCADEKSSNLMIWVLGNHRKFNTAWCLIRDM 185

Query: 184 HGSLLNSMQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIE 243
           H S +++ +AML+MIDRYA AN+  KAI TFH+MEKFRL+PDQ+AFH +LN+LCKYGN+E
Sbjct: 186 HQSKVDTRRAMLIMIDRYASANDPCKAIGTFHIMEKFRLSPDQQAFHTVLNALCKYGNVE 245

Query: 244 EAEEFMFVNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMI 303
           EAEEFMF+NKKLFPL TE FNIILNGWCN+++D+FEAKR+WREMSKCCI PD+TSYT+MI
Sbjct: 246 EAEEFMFLNKKLFPLETEGFNIILNGWCNISLDIFEAKRVWREMSKCCITPDATSYTNMI 305

Query: 304 SCFSKNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363
           SCF+K GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 306 SCFAKVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 365

Query: 364 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADSKMSFELLKRM 423
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  A  + + E+L RM
Sbjct: 366 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGAGFEGTLEILNRM 425

Query: 424 RQDGLGPTEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHL 483
           R+ GLGPT  + LI+ ++ F+L +PE AL +WVEMK+YEV  S  H SVL+QGLATCG L
Sbjct: 426 RKAGLGPTGDSLLIILSRFFKLGQPENALKIWVEMKQYEVELSHTHQSVLVQGLATCGWL 485

Query: 484 KKARELYDEMILHGFIAHPKIKTLLKEPDLGSIDEARQQVRHNNKGKFIPHRKGRTMRWK 541
            KARE Y +M   GF   PK+K LLKEP   S+ + +QQV+  N+  ++ H KG  +RWK
Sbjct: 486 TKAREFYADMRSKGFAEDPKLKKLLKEPARDSMHKGKQQVQRLNREGWLNHGKGTRVRWK 545

[Close]

BLAST of CsaV3_7G031860 vs. TrEMBL
Match: tr|A0A2P4LEG7|A0A2P4LEG7_QUESU (Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_34421 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 2.2e-115
Identity = 331/533 (62.10%), Postives = 405/533 (75.98%), Query Frame = 0


Query: 4   LSSIARRLCRIHPLPF---HHLLYLNRLRIPDSP------FQAFHQTFSLHSFFARQFSA 63
           L S+ARRL R  P  F   H +  L+    P S       F A HQT  + +     FS 
Sbjct: 6   LPSLARRLQRTPPHLFLLSHIIPSLSSSPSPSSQLPSHFLFHALHQTSLIPTLQTHHFST 65

Query: 64  LPSFS-QKLGDPFLFDTGRFQNYRQSDACNARFIELFKRVALLPSEVEAVAALDEFDVKA 123
              FS   L DPF F+  RF+ Y   D    RF+EL + V   PS+ EA+ +LD+  ++ 
Sbjct: 66  FQPFSAHNLDDPFDFNHPRFRTYDPHDRFLLRFLELLREVPHYPSKAEAMTSLDDSGIEV 125

Query: 124 DLDLVYSAIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMIWVLGNHKKFSTAWSLIREL 183
           + +++YSA+W LR++W+ +LLAF+W E+ G  DE+  NLMIWVLGNH+KF+TAW LIR++
Sbjct: 126 NSEMIYSAVWELREEWRLALLAFRWSEQWGCADEKSSNLMIWVLGNHRKFNTAWCLIRDM 185

Query: 184 HGSLLNSMQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIE 243
           H S +++ +AML+MIDRYA AN+  KAI TFH+MEKFRL+PDQ+AFH +LN+LCKYGN+E
Sbjct: 186 HQSKVDTRRAMLIMIDRYASANDPCKAIGTFHIMEKFRLSPDQQAFHTVLNALCKYGNVE 245

Query: 244 EAEEFMFVNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMI 303
           EAEEFMF+NKKLFPL TE FNIILNGWCN+++D+FEAKR+WREMSKCCI PD+TSYT+MI
Sbjct: 246 EAEEFMFLNKKLFPLETEGFNIILNGWCNISLDIFEAKRVWREMSKCCITPDATSYTNMI 305

Query: 304 SCFSKNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363
           SCF+K GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 306 SCFAKVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 365

Query: 364 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADSKMSFELLKRM 423
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  A  + + E+L RM
Sbjct: 366 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGAGFEGTLEILNRM 425

Query: 424 RQDGLGPTEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHL 483
           R+ GLGPT  + LI+ ++ F+L +PE AL +WVEMK+YEV  S  H SVL+QGLATCG L
Sbjct: 426 RKAGLGPTGDSLLIILSRFFKLGQPENALKIWVEMKQYEVELSHTHQSVLVQGLATCGWL 485

Query: 484 KKARELYDEMILHGFIAHPKIKTLLKEPDLGSIDEARQQVRHNNKGKFIPHRK 527
            KARE Y +M   GF   PK+K LLKEP   S+ + +QQV+  N+  ++ H K
Sbjct: 486 TKAREFYADMRSKGFAEDPKLKKLLKEPARDSMHKGKQQVQRLNREGWLNHGK 538

The following BLAST results are available for this feature:

BLAST of CsaV3_7G031860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659500.1	2.4e-251	100.00	PREDICTED: pentatricopeptide repeat-containing protein At1g80880, mitochondrial ...	[more]
XP_008461183.1	1.4e-227	93.59	PREDICTED: pentatricopeptide repeat-containing protein At1g80880, mitochondrial ...	[more]
XP_023547792.1	5.8e-189	82.78	pentatricopeptide repeat-containing protein At1g80880, mitochondrial [Cucurbita ...	[more]
XP_022992478.1	4.2e-187	82.60	pentatricopeptide repeat-containing protein At1g80880, mitochondrial [Cucurbita ...	[more]
XP_022953169.1	5.4e-187	82.60	pentatricopeptide repeat-containing protein At1g80880, mitochondrial [Cucurbita ...	[more]

BLAST of CsaV3_7G031860 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80880.1	1.1e-80	55.77	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G15010.1	8.7e-38	40.50	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G65820.1	2.3e-14	30.60	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G11310.1	4.8e-12	28.57	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G20300.1	3.1e-11	28.00	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of CsaV3_7G031860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SAH2\|PP137_ARATH	2.0e-79	55.77	Pentatricopeptide repeat-containing protein At1g80880, mitochondrial OS=Arabidop...	[more]
sp\|Q9LFQ4\|PP383_ARATH	1.6e-36	40.50	Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop...	[more]
sp\|Q9FH87\|PP447_ARATH	4.2e-13	30.60	Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th...	[more]
sp\|Q9LFM6\|PP375_ARATH	8.7e-11	28.57	Pentatricopeptide repeat-containing protein At5g11310, mitochondrial OS=Arabidop...	[more]
sp\|Q9LN22\|PPR54_ARATH	5.6e-10	28.00	Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidop...	[more]

BLAST of CsaV3_7G031860 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K678\|A0A0A0K678_CUCSA	1.6e-251	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G431960 PE=4 SV=1	[more]
tr\|A0A1S3CE43\|A0A1S3CE43_CUCME	9.4e-228	93.59	pentatricopeptide repeat-containing protein At1g80880, mitochondrial OS=Cucumis ...	[more]
tr\|A0A2I4GIU2\|A0A2I4GIU2_9ROSI	4.5e-121	62.54	pentatricopeptide repeat-containing protein At1g80880, mitochondrial OS=Juglans ...	[more]
tr\|A0A2P4LEF9\|A0A2P4LEF9_QUESU	8.5e-120	61.61	Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=5...	[more]
tr\|A0A2P4LEG7\|A0A2P4LEG7_QUESU	2.2e-115	62.10	Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=5...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0009451	RNA modification
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G031860.1	CsaV3_7G031860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 243..404 e-value: 9.6E-35 score: 122.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 405..504 e-value: 1.2E-12 score: 49.5 coord: 118..242 e-value: 1.9E-11 score: 45.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 146..511
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 288..315 e-value: 9.5E-6 score: 25.4 coord: 219..238 e-value: 0.13 score: 12.5 coord: 459..488 e-value: 4.1E-5 score: 23.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 342..400 e-value: 7.3E-10 score: 38.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 358..390 e-value: 1.5E-6 score: 26.0 coord: 460..488 e-value: 1.3E-4 score: 19.9 coord: 323..356 e-value: 1.9E-4 score: 19.4 coord: 288..320 e-value: 2.3E-7 score: 28.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 320..354 score: 9.898
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 249..284 score: 8.309
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 456..490 score: 10.008
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 180..214 score: 7.289
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 421..455 score: 6.533
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 355..389 score: 12.682
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 215..245 score: 7.048
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 285..319 score: 11.323
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 146..176 score: 6.347
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 526..546
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 30..517
None	No IPR available	PANTHER	PTHR24015:SF602	SUBFAMILY NOT NAMED	coord: 30..517

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G031860	CSPI07G20080	Wild cucumber (PI 183967)	cpicucB414
CsaV3_7G031860	Cucsa.105940	Cucumber (Gy14) v1	cgycucB131
CsaV3_7G031860	CmaCh17G009000	Cucurbita maxima (Rimu)	cmacucB0462
CsaV3_7G031860	CmoCh17G008710	Cucurbita moschata (Rifu)	cmocucB0455
CsaV3_7G031860	Cp4.1LG12g07180	Cucurbita pepo (Zucchini)	cpecucB0188
CsaV3_7G031860	CsGy7G018360	Cucumber (Gy14) v2	cgybcucB347
CsaV3_7G031860	Carg18732	Silver-seed gourd	carcucB0390
CsaV3_7G031860	Cla015319	Watermelon (97103) v1	cucwmB591
CsaV3_7G031860	MELO3C023471	Melon (DHL92) v3.5.1	cucmeB537
CsaV3_7G031860	ClCG09G003370	Watermelon (Charleston Gray)	cucwcgB546
CsaV3_7G031860	Lsi02G026640	Bottle gourd (USVL1VR-Ls)	cuclsiB538
CsaV3_7G031860	MELO3C023471.2	Melon (DHL92) v3.6.1	cucmedB525
CsaV3_7G031860	Cla97C09G165600	Watermelon (97103) v2	cucwmbB592
CsaV3_7G031860	Bhi09G000437	Wax gourd	cucwgoB730

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G031860	Cucumber (Chinese Long) v3	cuccucB154
CsaV3_7G031860	Cucumber (Chinese Long) v3	cuccucB186
CsaV3_7G031860	Silver-seed gourd	carcucB0486
CsaV3_7G031860	Cucumber (Gy14) v2	cgybcucB154
CsaV3_7G031860	Cucumber (Gy14) v1	cgycucB417
CsaV3_7G031860	Cucurbita maxima (Rimu)	cmacucB0595
CsaV3_7G031860	Cucurbita maxima (Rimu)	cmacucB1084
CsaV3_7G031860	Cucurbita moschata (Rifu)	cmocucB0582
CsaV3_7G031860	Cucurbita moschata (Rifu)	cmocucB1066
CsaV3_7G031860	Cucurbita pepo (Zucchini)	cpecucB0422
CsaV3_7G031860	Cucurbita pepo (Zucchini)	cpecucB0726
CsaV3_7G031860	Wild cucumber (PI 183967)	cpicucB191
CsaV3_7G031860	Wild cucumber (PI 183967)	cpicucB247
CsaV3_7G031860	Melon (DHL92) v3.5.1	cucmeB586
CsaV3_7G031860	Melon (DHL92) v3.6.1	cucmedB573
CsaV3_7G031860	Watermelon (Charleston Gray)	cucwcgB555
CsaV3_7G031860	Watermelon (Charleston Gray)	cucwcgB583