CsaV3_7G028330 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTCAAGGGCAGCCCATGTTTTCTTTCTTAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAGAAAACTTTTTTAGTTTTTGCTTTATATAACCTCTCCCCATGCCACACCCTCCATTTGTTAATATTCTACTAAATAAATCAACACATCACCTTTTTCTTGTTTTCTTATTCTTTTTTTCATTTTGATCATTATGCTCTCATCTCCTCTCTTCTTCAACTTCTATCCTCACCATTTTGTTCATAACCAAGGCAACCACATTGAGGATATTTCCTCTTATTTTCTCTTTGAGGCCACTGGGGACTCCGAGGTCGACCTTCAGAGCTCGTCTCCCGTCTCCACGGAGTTCAACGACGCGGAATCATGCACCGATGACACTGATCGTATTATGTTATGTAATAATGAAGATGATGAAGATGAAGAAGAGATGGGTGTTGAGAATGATGATGATGATGGGGATGAAGAAGAAGAAGAAGAAGAAGTAGTTGAAAGCAAGGCCATTGGGTTTTCAATAAAGTCAAATGCTTCTATTGATTCAACTAAGGATGAGTTCAAAATGTTGAATGAAGTTGATAAAAACAGGTTGTTTTGGGAGACTTGTTTGGCTTCATAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAATCTCATTTCTGAAAAACTGGGAGGGTTGTGGTGAAGGAAAAATGAAGGAAACTTGTGGGATTTCTTTCTTTTTTTAAAAAAAAAATATATACTTTTGTTGGTGTTGCTGTTTGATGTTTAAAATGTACATGAAAGCAAGAGATGGATTTTTATTGATCCATTTAAGACATTTCTTTTTCTTTTCGTTTGACTTTGTGTTATTGCCTTCTTTTTCTGGGTTCATTTATGATGTTTTAAGATTTCTGAAGATGGGGTGGTAATTCTCAAGTTGGACCTACACAAAAACTATTCATTTTAAATGGGCTAAATTGTAAATCTTGTCTCTGGTTTCAAGAAGTTTAGATTTCAGTTCTTATATTAAAATTTAATATTACCAATTTACATGATGACATATGTGTAAAAGACTAAGATGACTACTTTATCTTTTAGACTTGCTATTTTATTAAGTATGTAAAAGACTAAGATGTATCTAATTTTATACTGCTAAAAAAGAGTATATAAATGAAAAATACAAAACTGTCACATGGTAATTTTTCACCGGACAACTCCTTGGACGGCATGAATTAAAGATAGGTGCAATCTAGAGAACCATTCTCTCTTTGATTTATTAAGTTTTCTTTGTGAGAAAGAAAAACACATAGTTTAGTTCTAAAAAAAAG ATGCTCTCATCTCCTCTCTTCTTCAACTTCTATCCTCACCATTTTGTTCATAACCAAGGCAACCACATTGAGGATATTTCCTCTTATTTTCTCTTTGAGGCCACTGGGGACTCCGAGGTCGACCTTCAGAGCTCGTCTCCCGTCTCCACGGAGTTCAACGACGCGGAATCATGCACCGATGACACTGATCGTATTATGTTATGTAATAATGAAGATGATGAAGATGAAGAAGAGATGGGTGTTGAGAATGATGATGATGATGGGGATGAAGAAGAAGAAGAAGAAGAAGTAGTTGAAAGCAAGGCCATTGGGTTTTCAATAAAGTCAAATGCTTCTATTGATTCAACTAAGGATGAGTTCAAAATGTTGAATGAAGTTGATAAAAACAGGTTGTTTTGGGAGACTTGTTTGGCTTCATAG ATGCTCTCATCTCCTCTCTTCTTCAACTTCTATCCTCACCATTTTGTTCATAACCAAGGCAACCACATTGAGGATATTTCCTCTTATTTTCTCTTTGAGGCCACTGGGGACTCCGAGGTCGACCTTCAGAGCTCGTCTCCCGTCTCCACGGAGTTCAACGACGCGGAATCATGCACCGATGACACTGATCGTATTATGTTATGTAATAATGAAGATGATGAAGATGAAGAAGAGATGGGTGTTGAGAATGATGATGATGATGGGGATGAAGAAGAAGAAGAAGAAGAAGTAGTTGAAAGCAAGGCCATTGGGTTTTCAATAAAGTCAAATGCTTCTATTGATTCAACTAAGGATGAGTTCAAAATGTTGAATGAAGTTGATAAAAACAGGTTGTTTTGGGAGACTTGTTTGGCTTCATAG MLSSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEVDLQSSSPVSTEFNDAESCTDDTDRIMLCNNEDDEDEEEMGVENDDDDGDEEEEEEEVVESKAIGFSIKSNASIDSTKDEFKMLNEVDKNRLFWETCLAS
BLAST of CsaV3_7G028330 vs. NCBI nr
Match: XP_011659319.1 (PREDICTED: nucleophosmin [Cucumis sativus] >KGN44840.1 hypothetical protein Csa_7G390190 [Cucumis sativus]) HSP 1 Score: 203.0 bits (515), Expect = 6.7e-49 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
BLAST of CsaV3_7G028330 vs. NCBI nr
Match: XP_008451422.1 (PREDICTED: glutamic acid-rich protein [Cucumis melo]) HSP 1 Score: 151.4 bits (381), Expect = 2.3e-33 Identity = 121/147 (82.31%), Postives = 124/147 (84.35%), Query Frame = 0
BLAST of CsaV3_7G028330 vs. NCBI nr
Match: XP_022991734.1 (uncharacterized protein LOC111488264 [Cucurbita maxima]) HSP 1 Score: 125.2 bits (313), Expect = 1.8e-25 Identity = 93/142 (65.49%), Postives = 100/142 (70.42%), Query Frame = 0
BLAST of CsaV3_7G028330 vs. NCBI nr
Match: XP_023522205.1 (uncharacterized protein LOC111786091 [Cucurbita pepo subsp. pepo] >XP_023548487.1 uncharacterized protein LOC111807136 [Cucurbita pepo subsp. pepo] >XP_023549405.1 uncharacterized protein LOC111807769 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 122.1 bits (305), Expect = 1.5e-24 Identity = 82/142 (57.75%), Postives = 90/142 (63.38%), Query Frame = 0
BLAST of CsaV3_7G028330 vs. NCBI nr
Match: XP_022953969.1 (uncharacterized protein LOC111456367 [Cucurbita moschata]) HSP 1 Score: 117.5 bits (293), Expect = 3.7e-23 Identity = 87/142 (61.27%), Postives = 96/142 (67.61%), Query Frame = 0
BLAST of CsaV3_7G028330 vs. TrEMBL
Match: tr|A0A0A0K519|A0A0A0K519_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390190 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 4.5e-49 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
BLAST of CsaV3_7G028330 vs. TrEMBL
Match: tr|A0A1S3BRI2|A0A1S3BRI2_CUCME (glutamic acid-rich protein OS=Cucumis melo OX=3656 GN=LOC103492721 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.5e-33 Identity = 121/147 (82.31%), Postives = 124/147 (84.35%), Query Frame = 0
BLAST of CsaV3_7G028330 vs. TrEMBL
Match: tr|W9SBN2|W9SBN2_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_020441 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.5e-07 Identity = 77/131 (58.78%), Postives = 91/131 (69.47%), Query Frame = 0
BLAST of CsaV3_7G028330 vs. TrEMBL
Match: tr|A0A2P6PWD0|A0A2P6PWD0_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0292431 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 7.2e-07 Identity = 66/129 (51.16%), Postives = 82/129 (63.57%), Query Frame = 0
BLAST of CsaV3_7G028330 vs. TrEMBL
Match: tr|A0A2P5C845|A0A2P5C845_PARAD (Myelin transcription factor-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_176210 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.8e-05 Identity = 47/143 (32.87%), Postives = 59/143 (41.26%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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