CsaV3_7G026890 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G026890
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein
Location	chr7 : 16522042 .. 16524245 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAAAAGTAACCCAATTTCTGTCCCTTTCTTTCTCTTCCCCTTACTCCTCTGTCATTGTGTCTTCTAATTTCTTCTCCCAAAACCCCAAACCCCCATTTTCTTCTTCTTTTCCATTTTTATATAAATAACCCTCCCCCCCTCTCTCTTTTCTTTCAACTTCAACCCCCCCACCATTCCTCACTCACTTTCTCTCTTTCCAATTTACAAACCCAACCTGCTCCTGCTGCTGCTGCCTCTTCTTCCATGGAGGTATCTCATCAATCTCTATTAACCAACCCTCATTTCTCCTCCTCCTCTTCTTCTTTTTTGTACTTTATATTTATTGTGTTTTTTCTTTTCTCTTTTTTTTTGGTTGCATAGGATTACTACTACCGGAGAAACTACATTCCCAGCTTCGGTAACTGGGAATGGAACGACCATCTCCCTTTCTCCCACTGCTTTGAATCTTCTAGAATCGCGGGTTTCCCTCACGACACCGATCTCTACGTCGCCGGCGATCTCTACGAGAATGACGTGGTTACCCCAGCCATGATCGTCGTCCCTCGCCCCAGGGTCCGTTCCTCTTTTTCAACTCTTATTCTATCATCATCATTATTTATTAATTCCATTCTTTTAAATCACATTTTGTTGTTTATTTCTTTCAATGTTAAAATACATAGAAGCATAAAAATATGATTAAAGATTTAATTTAATGTTTTAGTAATATTATTTACTTTTGAAAAAGAAAAAAAAAAGAAAGGAAAGTGATGATAATGAGTGGATCCACATGCTTGCTCTTACATTAAGCATGCTCATAACCTTTTTTTTACCTTTCAATGTACAAGAAAAGGAAAGGCAAAAAAAAAAAGAAAATCAAGTGCGTGATAGGCACGTGACATTACATTTAATTAATGAATTATTTATAAGACTAAGTAGAAGGAGGAAGGGAAGGAAAAGGGTAAAAAAGAAAAAGAAAAAGACTTTTGGAAAAATGAATTAAAAGTTGTTGGCGGGTGATGCAGAGGAAGCGTGACAGACAGGGGAAGCAATCAAAGAAGGAGAAGTGGGGAAGCCCAAGTAATGGAATGAGTCATAATTATTCAACAAAGCCAATGCCAAAGCCCGTTGATGAAGATTTGTATAAAATTTCTCCTGACCTCCTTGCTGCCAAGTCCAAAAAGGTCTTTTCACTTTTCCCCTTTTCTTTTTTAAATTTTAGATTCCACTTTAATACATTTTCCCCTTCATTAACTTCACTTTTTCTGGTAACAACTTGGTATCAATATTTCCTTCTCTATTTTTTTTTTTCTCTTTTGTAATAAAAGATAATACATTAAAGAGGTTTCACTTTGAGTTAAAGATGGTATTTCTTCGTTTGGATTTTGACATTACATAACCTTATTTATTCAATTGTTTTTAGAGAATTATTATAAATGGCAAAATTATTGAAAATATTTACCATAGATCTGATACATCTGGAATTTTACGAAAATGATCCATTTTTCTTCAACATTTTTGTAAAACTCTACTAGAAAGATGATGGTAAGTTTTGGGTGTCATTAGAATGGTTTAAATTTATTTGAAATCTAGAGAGAAAAAACAAAAAAGATACAAAAGTTGAAAATAAAACTTCTTGTTAATACTTTTCTTTAAATTTTGTTTATGGGTTATGAACTTATGTATGTATTTAATTATAAATGGTTTTTCTAATGTATATATGTTTATTTATGCAGAAAAGAGGGCTGAGTTACATAACAAATTGCTTTGTGCCAACTTGTTTGATTTGATATGATTTGAAGAAGAAGAATGAAGGGGAAAAGAAGATGAAGATGATGAAGATGAAACTAATGGGAGAATGAAATGAATGTATATTTTTCTTATGAAAAGAACAGAGAGAGAGAGAGAGGCCAAATAGTACATAATCTTTTGGGATGTTTGGTTATCAAATTCATAATTATATATAATATATTTATCACCAAAAAAAAAAAAAAAATTATCATAGAGAGGTGCTGATTTTTAATTTTTATTTTTGAGAGTGTTTTTTCTTTCTTTTAAAATTAGAGGGGAGAATTAATTGTACAAGGTTCTCCCATTGGTTACTATGTTTACCTTTGGATGTGTAATGAATATTCTATATTTCAAAGTAAAAGACCACCACCTTTATTGGGCCTTCCATTTCACTATTATTTCTCTTTTTTTGGATTACATTTGGACCTATGAAG

mRNA sequence

ATGGAGGATTACTACTACCGGAGAAACTACATTCCCAGCTTCGGTAACTGGGAATGGAACGACCATCTCCCTTTCTCCCACTGCTTTGAATCTTCTAGAATCGCGGGTTTCCCTCACGACACCGATCTCTACGTCGCCGGCGATCTCTACGAGAATGACGTGGTTACCCCAGCCATGATCGTCGTCCCTCGCCCCAGGAGGAAGCGTGACAGACAGGGGAAGCAATCAAAGAAGGAGAAGTGGGGAAGCCCAAGTAATGGAATGAGTCATAATTATTCAACAAAGCCAATGCCAAAGCCCGTTGATGAAGATTTGTATAAAATTTCTCCTGACCTCCTTGCTGCCAAGTCCAAAAAGAAAAGAGGGCTGAGTTACATAACAAATTGCTTTGTGCCAACTTGTTTGATTTGA

Coding sequence (CDS)

ATGGAGGATTACTACTACCGGAGAAACTACATTCCCAGCTTCGGTAACTGGGAATGGAACGACCATCTCCCTTTCTCCCACTGCTTTGAATCTTCTAGAATCGCGGGTTTCCCTCACGACACCGATCTCTACGTCGCCGGCGATCTCTACGAGAATGACGTGGTTACCCCAGCCATGATCGTCGTCCCTCGCCCCAGGAGGAAGCGTGACAGACAGGGGAAGCAATCAAAGAAGGAGAAGTGGGGAAGCCCAAGTAATGGAATGAGTCATAATTATTCAACAAAGCCAATGCCAAAGCCCGTTGATGAAGATTTGTATAAAATTTCTCCTGACCTCCTTGCTGCCAAGTCCAAAAAGAAAAGAGGGCTGAGTTACATAACAAATTGCTTTGTGCCAACTTGTTTGATTTGA

Protein sequence

MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMIVVPRPRRKRDRQGKQSKKEKWGSPSNGMSHNYSTKPMPKPVDEDLYKISPDLLAAKSKKKRGLSYITNCFVPTCLI

Homology

[Close]

BLAST of CsaV3_7G026890 vs. NCBI nr
Match: XP_004150335.2 (PREDICTED: uncharacterized protein LOC101219200 [Cucumis sativus] >KGN44691.1 hypothetical protein Csa_7G372860 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 4.8e-76
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI 60
           MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI
Sbjct: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI 60

Query: 61  VVPRPRRKRDRQGKQSKKEKWGSPSNGMSHNYSTKPMPKPVDEDLYKISPDLLAAKSKKK 120
           VVPRPRRKRDRQGKQSKKEKWGSPSNGMSHNYSTKPMPKPVDEDLYKISPDLLAAKSKKK
Sbjct: 61  VVPRPRRKRDRQGKQSKKEKWGSPSNGMSHNYSTKPMPKPVDEDLYKISPDLLAAKSKKK 120

Query: 121 RGLSYITNCFVPTCLI 137
           RGLSYITNCFVPTCLI
Sbjct: 121 RGLSYITNCFVPTCLI 136

[Close]

BLAST of CsaV3_7G026890 vs. NCBI nr
Match: XP_023550147.1 (uncharacterized protein LOC111808425 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211.8 bits (538), Expect = 1.4e-51
Identity = 104/137 (75.91%), Postives = 115/137 (83.94%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI 60
           MEDY Y+RN+IP+FGNWEWNDHLPF+ CFE+SRIAG+P   DLYVAGDLY+NDVVTPAMI
Sbjct: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60

Query: 61  VVPRPRRKRDRQGKQSKKEKW-GSPSNGMSHNYSTKPMPKPVDEDLYKISPDLLAAKSKK 120
           VVPRPRRKRDR GKQ  ++KW  SP     H    KPMPKPVDEDLYKISP+ L AK KK
Sbjct: 61  VVPRPRRKRDRHGKQEMQQKWTESPPQVTLH--PPKPMPKPVDEDLYKISPN-LCAKPKK 120

Query: 121 KRGLSYITNCFVPTCLI 137
           KRGLSYIT+CFVPTCLI
Sbjct: 121 KRGLSYITSCFVPTCLI 134

[Close]

BLAST of CsaV3_7G026890 vs. NCBI nr
Match: XP_022960043.1 (uncharacterized protein LOC111460910 [Cucurbita moschata] >XP_023004237.1 uncharacterized protein LOC111497631 [Cucurbita maxima])

HSP 1 Score: 211.5 bits (537), Expect = 1.9e-51
Identity = 104/137 (75.91%), Postives = 115/137 (83.94%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI 60
           MEDY Y+RN+IP+FGNWEWNDHLPF+ CFE+SRIAG+P   DLYVAGDLY+NDVVTPAMI
Sbjct: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60

Query: 61  VVPRPRRKRDRQGKQSKKEKW-GSPSNGMSHNYSTKPMPKPVDEDLYKISPDLLAAKSKK 120
           VVPRPRRKRDR GKQ K++KW  SP     H    KPMPKPVDEDLYKISP+   AK KK
Sbjct: 61  VVPRPRRKRDRHGKQEKQQKWTESPPQVTLH--PPKPMPKPVDEDLYKISPN-PCAKPKK 120

Query: 121 KRGLSYITNCFVPTCLI 137
           KRGLSYIT+CFVPTCLI
Sbjct: 121 KRGLSYITSCFVPTCLI 134

[Close]

BLAST of CsaV3_7G026890 vs. NCBI nr
Match: XP_022991206.1 (uncharacterized protein LOC111487931 [Cucurbita maxima])

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43
Identity = 94/143 (65.73%), Postives = 103/143 (72.03%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI 60
           MEDYY RRNYIPSFGNWEWNDHL FSHCFESSRIAG+PHDTDLYV GDLYEND++TPAMI
Sbjct: 1   MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDIITPAMI 60

Query: 61  VVPRPRRKRDRQGKQSKKEKW-------GSPSNGMSHNYSTKPMPKPVDEDLYKISPDLL 120
           VVPR RR             W        SP + +      +P PKPVDEDLYKI P+LL
Sbjct: 61  VVPRHRRXXXXXXXXXXXXNWMMNMKETESPPHELLQ--FPRPKPKPVDEDLYKIPPELL 120

Query: 121 AAKSKKKRGLSYITNCFVPTCLI 137
            AKS+KKRGLS+  N FVP CLI
Sbjct: 121 -AKSRKKRGLSFFANWFVPNCLI 140

[Close]

BLAST of CsaV3_7G026890 vs. NCBI nr
Match: XP_023548222.1 (uncharacterized protein LOC111806925 [Cucurbita pepo subsp. pepo] >XP_023548223.1 uncharacterized protein LOC111806926 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.1 bits (466), Expect = 3.2e-43
Identity = 95/143 (66.43%), Postives = 102/143 (71.33%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI 60
           MEDYY RRNYIPSFGNWEWNDHL FSHCFESSRIAG+PHDTDLYV GDLYENDVVTPAMI
Sbjct: 1   MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMI 60

Query: 61  VVPRPRRKRDRQGKQSKKEKW-------GSPSNGMSHNYSTKPMPKPVDEDLYKISPDLL 120
           VVPR R              W        SP + +      +P PKPVDEDLYKI P+LL
Sbjct: 61  VVPRHRXXXXXXXXXXXXANWMMNMKETESPPHELLQ--FPRPKPKPVDEDLYKIPPELL 120

Query: 121 AAKSKKKRGLSYITNCFVPTCLI 137
            AKS+KKRGLS+  N FVP CLI
Sbjct: 121 -AKSRKKRGLSFFANWFVPNCLI 140

[Close]

BLAST of CsaV3_7G026890 vs. TAIR10
Match: AT5G48500.1 (unknown protein)

HSP 1 Score: 121.3 bits (303), Expect = 4.6e-28
Identity = 66/160 (41.25%), Postives = 92/160 (57.50%), Query Frame = 0


Query: 5   YYRRNYIPSFGNWEWNDHLPFSHCFESS--------RIAGFPHDTDLYVAGDLYEN-DVV 64
           Y RR ++P+FG+W+WND +PF+ CFE++          A +P D DLY+AGDLY+N  +V
Sbjct: 10  YCRRGHVPAFGSWDWNDAVPFTQCFETATTQQPAFLHYASYPQDRDLYLAGDLYDNHHLV 69

Query: 65  TPAMIVVPRPRRKRDRQGKQSKKEKWGSPSNGMSHNYSTK-------------------P 124
            PA+I+VPR R K  ++  + K+       +   HNY T+                    
Sbjct: 70  APAVIIVPRRRAKVGQEPAEKKRN-----VSKQQHNYKTEAREFNAPVSCPTPVVKRRMK 129

Query: 125 MPKPVDEDLYKISPDLLAAKSKKKR---GLSYITNCFVPT 134
            PKPVDEDLYK+SP LL+ KSK+KR   G   I+ CF+PT
Sbjct: 130 APKPVDEDLYKVSPQLLSVKSKRKRGGGGFGCISRCFLPT 164

[Close]

BLAST of CsaV3_7G026890 vs. TAIR10
Match: AT5G18310.2 (unknown protein)

HSP 1 Score: 43.1 bits (100), Expect = 1.6e-04
Identity = 44/162 (27.16%), Postives = 62/162 (38.27%), Query Frame = 0


Query: 2   EDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAG-FPHDTDLYVAGDLYENDVVTPAMI 61
           + Y  +   IP FG WE  + +P +  FE+ R AG   H                     
Sbjct: 7   DTYKKKSGQIPRFGEWEEANEMPITQYFENPRQAGLIRHQYXXXXXXXXXXXXXXXXXXX 66

Query: 62  VV---------PRPRRKRDRQGKQSKKEKWGSPS-----NGMSHNY-------------- 121
                      PRPR    ++     KEK G        +  S  Y              
Sbjct: 67  XXXXXXXXXHHPRPRHLHAQRQTAGTKEKRGPQRRVRDVSAQSDKYYIDVNGVKQFKNDV 126

Query: 122 --STKPMPKPVDEDLYKISPDLLAAKSKKKRGLSYITNCFVP 133
             + KP PKPVDEDLYKI P+ + + ++K+R  S++  C VP
Sbjct: 127 ALTCKP-PKPVDEDLYKIPPEFIHSSTRKRRP-SFLA-CLVP 165

[Close]

BLAST of CsaV3_7G026890 vs. TrEMBL
Match: tr|A0A0A0KA54|A0A0A0KA54_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372860 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 3.2e-76
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI 60
           MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI
Sbjct: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI 60

Query: 61  VVPRPRRKRDRQGKQSKKEKWGSPSNGMSHNYSTKPMPKPVDEDLYKISPDLLAAKSKKK 120
           VVPRPRRKRDRQGKQSKKEKWGSPSNGMSHNYSTKPMPKPVDEDLYKISPDLLAAKSKKK
Sbjct: 61  VVPRPRRKRDRQGKQSKKEKWGSPSNGMSHNYSTKPMPKPVDEDLYKISPDLLAAKSKKK 120

Query: 121 RGLSYITNCFVPTCLI 137
           RGLSYITNCFVPTCLI
Sbjct: 121 RGLSYITNCFVPTCLI 136

[Close]

BLAST of CsaV3_7G026890 vs. TrEMBL
Match: tr|A0A1S3VCC9|A0A1S3VCC9_VIGRR (uncharacterized protein LOC106773592 OS=Vigna radiata var. radiata OX=3916 GN=LOC106773592 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.4e-39
Identity = 83/145 (57.24%), Postives = 108/145 (74.48%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGF-------PHDTDLYVAGDLYEND 60
           ME+YYY+R+++P+FG+W+WND+LPF+ CFES+R AG          D DLYV GDLYEND
Sbjct: 1   MEEYYYKRHHVPAFGSWDWNDNLPFTQCFESARQAGLLRYSYSESEDRDLYVTGDLYEND 60

Query: 61  VVTPAMIVVPRPRRK-RDRQGKQSKKEKWGSPSNGMSH--NYSTKPMPKPVDEDLYKISP 120
           VVTPAMIVVPR R K R +  K++KK+ W S    +S   N  ++P PKPVDEDLYKISP
Sbjct: 61  VVTPAMIVVPRRREKVRCQHEKEAKKQNWVSNVKELSSPTNPISRPKPKPVDEDLYKISP 120

Query: 121 DLLAAKSKKKRGLSYITNCFVPTCL 136
           +LL AK++KKRGL +  +C +PTC+
Sbjct: 121 ELLYAKTRKKRGLCFFPSCLIPTCI 145

[Close]

BLAST of CsaV3_7G026890 vs. TrEMBL
Match: tr|V7ALX6|V7ALX6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_010G031300g PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.6e-38
Identity = 82/145 (56.55%), Postives = 106/145 (73.10%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGF-------PHDTDLYVAGDLYEND 60
           ME+YYY+R+++P+FG+W+WND+LPF+ CFES+R AG          D DLYV GDLYEND
Sbjct: 1   MEEYYYKRHHVPAFGSWDWNDNLPFTQCFESARQAGLLRYSYSESEDRDLYVTGDLYEND 60

Query: 61  VVTPAMIVVPRPRRK-RDRQGKQSKKEKWGSPSNGMSHNYS--TKPMPKPVDEDLYKISP 120
           VVTPAMIVVPR R K R +  K++KK+ W S    +    S   +P PKPVDEDLYKISP
Sbjct: 61  VVTPAMIVVPRRREKGRCQHEKEAKKQNWVSNVKELPSPTSPIARPKPKPVDEDLYKISP 120

Query: 121 DLLAAKSKKKRGLSYITNCFVPTCL 136
           +LL AK++KKRGL +  +C +PTC+
Sbjct: 121 ELLYAKTRKKRGLCFFPSCLIPTCI 145

[Close]

BLAST of CsaV3_7G026890 vs. TrEMBL
Match: tr|A0A0B2P8E6|A0A0B2P8E6_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_043819 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.0e-37
Identity = 81/145 (55.86%), Postives = 105/145 (72.41%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGF-------PHDTDLYVAGDLYEND 60
           ME YYY+R+++P+FG+W+WND+LPF+ CFE++R AG          D DLYV GDLYEND
Sbjct: 1   MEAYYYKRHHVPAFGSWDWNDNLPFTQCFETARQAGLLRYSYSESEDRDLYVTGDLYEND 60

Query: 61  VVTPAMIVVPRPRRK-RDRQGKQSKKEKWGSPSNGMSHNYS--TKPMPKPVDEDLYKISP 120
           VVTPAMIVVPR R K R +  K++KK+ W S    +    S   +P PKPVDEDLYKISP
Sbjct: 61  VVTPAMIVVPRRREKVRCQNEKEAKKQSWRSNVKELPSPTSPIQRPKPKPVDEDLYKISP 120

Query: 121 DLLAAKSKKKRGLSYITNCFVPTCL 136
           +LL AK++KKRGL +  +C +PTC+
Sbjct: 121 ELLYAKTRKKRGLCFFPSCLIPTCI 145

[Close]

BLAST of CsaV3_7G026890 vs. TrEMBL
Match: tr|C6SYN7|C6SYN7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.0e-37
Identity = 81/145 (55.86%), Postives = 105/145 (72.41%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGF-------PHDTDLYVAGDLYEND 60
           ME YYY+R+++P+FG+W+WND+LPF+ CFE++R AG          D DLYV GDLYEND
Sbjct: 1   MEAYYYKRHHVPAFGSWDWNDNLPFTQCFETARQAGLLRYSYSESEDRDLYVTGDLYEND 60

Query: 61  VVTPAMIVVPRPRRK-RDRQGKQSKKEKWGSPSNGMSHNYS--TKPMPKPVDEDLYKISP 120
           VVTPAMIVVPR R K R +  K++KK+ W S    +    S   +P PKPVDEDLYKISP
Sbjct: 61  VVTPAMIVVPRRREKVRCQNEKEAKKQSWRSNVKELPSPTSPIQRPKPKPVDEDLYKISP 120

Query: 121 DLLAAKSKKKRGLSYITNCFVPTCL 136
           +LL AK++KKRGL +  +C +PTC+
Sbjct: 121 ELLYAKTRKKRGLCFFPSCLIPTCI 145

The following BLAST results are available for this feature:

BLAST of CsaV3_7G026890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150335.2	4.8e-76	100.00	PREDICTED: uncharacterized protein LOC101219200 [Cucumis sativus] >KGN44691.1 hy...	[more]
XP_023550147.1	1.4e-51	75.91	uncharacterized protein LOC111808425 [Cucurbita pepo subsp. pepo]	[more]
XP_022960043.1	1.9e-51	75.91	uncharacterized protein LOC111460910 [Cucurbita moschata] >XP_023004237.1 unchar...	[more]
XP_022991206.1	1.1e-43	65.73	uncharacterized protein LOC111487931 [Cucurbita maxima]	[more]
XP_023548222.1	3.2e-43	66.43	uncharacterized protein LOC111806925 [Cucurbita pepo subsp. pepo] >XP_023548223....	[more]

BLAST of CsaV3_7G026890 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G48500.1	4.6e-28	41.25	unknown protein	[more]
AT5G18310.2	1.6e-04	27.16	unknown protein	[more]

BLAST of CsaV3_7G026890 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_7G026890 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KA54\|A0A0A0KA54_CUCSA	3.2e-76	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372860 PE=4 SV=1	[more]
tr\|A0A1S3VCC9\|A0A1S3VCC9_VIGRR	2.4e-39	57.24	uncharacterized protein LOC106773592 OS=Vigna radiata var. radiata OX=3916 GN=LO...	[more]
tr\|V7ALX6\|V7ALX6_PHAVU	1.6e-38	56.55	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_010G031300g PE=4 ...	[more]
tr\|A0A0B2P8E6\|A0A0B2P8E6_GLYSO	1.0e-37	55.86	Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_043819 PE=4 SV=1	[more]
tr\|C6SYN7\|C6SYN7_SOYBN	1.0e-37	55.86	Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0080167	response to karrikin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G026890.1	CsaV3_7G026890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..93
None	No IPR available	PANTHER	PTHR33699	FAMILY NOT NAMED	coord: 1..135
None	No IPR available	PANTHER	PTHR33699:SF2	SUBFAMILY NOT NAMED	coord: 1..135

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G026890	CSPI07G15120	Wild cucumber (PI 183967)	cpicucB414
CsaV3_7G026890	Cucsa.388060	Cucumber (Gy14) v1	cgycucB590
CsaV3_7G026890	CmaCh17G013150	Cucurbita maxima (Rimu)	cmacucB0457
CsaV3_7G026890	CmaCh08G002670	Cucurbita maxima (Rimu)	cmacucB1084
CsaV3_7G026890	CmoCh17G012850	Cucurbita moschata (Rifu)	cmocucB0450
CsaV3_7G026890	CmoCh08G002650	Cucurbita moschata (Rifu)	cmocucB1066
CsaV3_7G026890	Cp4.1LG12g10660	Cucurbita pepo (Zucchini)	cpecucB0182
CsaV3_7G026890	Cp4.1LG13g07050	Cucurbita pepo (Zucchini)	cpecucB0243
CsaV3_7G026890	CsGy7G013610	Cucumber (Gy14) v2	cgybcucB347
CsaV3_7G026890	Carg11495	Silver-seed gourd	carcucB0013
CsaV3_7G026890	Carg05090	Silver-seed gourd	carcucB0102
CsaV3_7G026890	Cla014867	Watermelon (97103) v1	cucwmB592
CsaV3_7G026890	ClCG09G008150	Watermelon (Charleston Gray)	cucwcgB547
CsaV3_7G026890	Lsi02G021680	Bottle gourd (USVL1VR-Ls)	cuclsiB538
CsaV3_7G026890	Cla97C09G170820	Watermelon (97103) v2	cucwmbB593
CsaV3_7G026890	Bhi09G001015	Wax gourd	cucwgoB731

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G026890	Melon (DHL92) v3.5.1	cucmeB542
CsaV3_7G026890	Melon (DHL92) v3.5.1	cucmeB558
CsaV3_7G026890	Melon (DHL92) v3.6.1	cucmedB531
CsaV3_7G026890	Melon (DHL92) v3.6.1	cucmedB545