CmaCh08G002670 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh08G002670
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein
Location	Cma_Chr08 : 1533820 .. 1535724 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTCCAAAATTCTCAACTCTCTCTGCAAAAAAAGCTTGTTCACTTCATCAATGGAGGTTTGTATACTTCCCTTCGTCTTCGTGTTTGACTTTTTCTTCTGGTTTTTTTGACTCGTTACCATGGTTTTGGCTGCATAGGATTACGACTACCAGAGGAACTTCATCCCTACCTTCGGAAACTGGGAATGGAACGACCATCTCCCTTTCACACAGTGCTTCGAAGCTTCCAGAATCGCCGGATATCCCGATGTTCGCGATCTCTACGTCGCCGGCGATCTCTACCAAAACGACGTCGTTACTCCCGCTATGATCGTCGTTCCGCGCCCCAGGGTAACTAACTAACTCATTTACTATTTTTATTATTTATTTATTTATTTATTTATTATTATTATTATTTGTTGTGTGAATCATTTTTAGAGGACACTTTTTTCCAGCCTTAAGCATGCTTTGCCTTTTTATTTTTTCACTTTCACTTATTATAAATTAAAAAGGAAAAAAAAAATGTAAACTGCGTGATCGCCACGTGACTTTACTTGATTCCTACAGAAAAGTTGTCCCCCTAATTATTATTATTATTTTTAAAAGTTTTTGTTGAGATATTCATTATTATAGTAATTTCAAAAAACAAAATATATATATATATATAGTTCAAATATTTTAAATAATATATTTTTATTTACTCGATTATTTAATTTCTTTATTTATTCGAATAAAATTTTTAAGTTTTTAATTTTTAACAAAATTTGAAATAAATAACCTTAAAAATCAATTGAGTAACTCGAATAAAGGATGTATAATAATAAATAAATAAAAGTAAAAGTTATTTAAAATTAAAGTTAGCATTTTCATTTGGAAGTGAGCGAAAGTTAATGCTAAAGTGACAGGCGGTGAGGGAAATGGGGAAAAAAAACAGTGAACATTAAACGAAATTTAATGAAATTTTTGGAAAAAATGACAAAAAAAAAAACATTTTTGTACTAAATTAATGGTATAGTGACAAGCGGTGATGTAATAATAATAATATTATTATTTTTTATTGTGGAATTATAAAATGGTGAGTGGGGTGACGGATGAATGTGCAGAGAAAGCGTGACAGACATGGGAAGCAAGAAAAGCAGCAAAAGTGGACCGAAAGCCCTCCTCAAGTGACACTGCACCCTCCAAAGCCAATGCCCAAACCCGTCGACGAAGACTTATACAAAATCTCTCCCAATCCCTGCGCCAAGCCCAAAAAGGTCTTTTCACTTTAATGTTTTTTTTCTAACTCGTTCGGGCACTCGTAGATATAAATAATAGACGTTGGGTCAGGTCAAGTTGAGACATATTCTAGACTCAACGTTATTGTTCGAGCACTCGTAGATATAAATAATAAAGGTGTTTGTGAGTTAGGTTAGGTTAGGTTGAGACATTTTTTAAACATAACGTTATCATTCGGGTCATATTAAATAAGGACCCAACCCGACTCATCCATAGATTTTTTTGAGTATGAGTTGATTGGGTTTTCTCGAAACTAGATTATAATGTGAATTGGTTTGAAATTTTGCAGAAAAGAGGGTTGAGTTACATAACGAGCTGCTTTGTGCCAACGTGTTTGATTTGAAGACGACGAGGAAGAAAGAGCGGAATGTTCCACGGGGACGAGGAATGTATATTTGAAGAAAAAAAAAAAAAACAAACCGTACATAATGTTTTGGGATGTTTGGTTATTAGATTAATGTGATGTTTTTATGTTTTATATATATATTTTGAAGAAAAATAGATTTTCTTTTTTTTTTTTTAATTTTTAATTTTGGGAGTGTGTTTTTTGATTAGAGGAGAGAGGGGAGAGCTATTTGTACAAGGTTCTTCCATTGATTACTATGCTATGACCTATCAATGAATGTCGTTGTGCTTCTTCTTTTCTCA

mRNA sequence

CCTTCCAAAATTCTCAACTCTCTCTGCAAAAAAAGCTTGTTCACTTCATCAATGGAGGATTACGACTACCAGAGGAACTTCATCCCTACCTTCGGAAACTGGGAATGGAACGACCATCTCCCTTTCACACAGTGCTTCGAAGCTTCCAGAATCGCCGGATATCCCGATGTTCGCGATCTCTACGTCGCCGGCGATCTCTACCAAAACGACGTCGTTACTCCCGCTATGATCGTCGTTCCGCGCCCCAGGAGAAAGCGTGACAGACATGGGAAGCAAGAAAAGCAGCAAAAGTGGACCGAAAGCCCTCCTCAAGTGACACTGCACCCTCCAAAGCCAATGCCCAAACCCGTCGACGAAGACTTATACAAAATCTCTCCCAATCCCTGCGCCAAGCCCAAAAAGAAAAGAGGGTTGAGTTACATAACGAGCTGCTTTGTGCCAACGTGTTTGATTTGAAGACGACGAGGAAGAAAGAGCGGAATGTTCCACGGGGACGAGGAATGTATATTTGAAGAAAAAAAAAAAAAACAAACCGTACATAATGTTTTGGGATGTTTGGTTATTAGATTAATGTGATGTTTTTATGTTTTATATATATATTTTGAAGAAAAATAGATTTTCTTTTTTTTTTTTTAATTTTTAATTTTGGGAGTGTGTTTTTTGATTAGAGGAGAGAGGGGAGAGCTATTTGTACAAGGTTCTTCCATTGATTACTATGCTATGACCTATCAATGAATGTCGTTGTGCTTCTTCTTTTCTCA

Coding sequence (CDS)

ATGGAGGATTACGACTACCAGAGGAACTTCATCCCTACCTTCGGAAACTGGGAATGGAACGACCATCTCCCTTTCACACAGTGCTTCGAAGCTTCCAGAATCGCCGGATATCCCGATGTTCGCGATCTCTACGTCGCCGGCGATCTCTACCAAAACGACGTCGTTACTCCCGCTATGATCGTCGTTCCGCGCCCCAGGAGAAAGCGTGACAGACATGGGAAGCAAGAAAAGCAGCAAAAGTGGACCGAAAGCCCTCCTCAAGTGACACTGCACCCTCCAAAGCCAATGCCCAAACCCGTCGACGAAGACTTATACAAAATCTCTCCCAATCCCTGCGCCAAGCCCAAAAAGAAAAGAGGGTTGAGTTACATAACGAGCTGCTTTGTGCCAACGTGTTTGATTTGA

Protein sequence

MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRHGKQEKQQKWTESPPQVTLHPPKPMPKPVDEDLYKISPNPCAKPKKKRGLSYITSCFVPTCLI

Homology

[Close]

BLAST of CmaCh08G002670 vs. TrEMBL
Match: A0A0A0KA54_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G372860 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.9e-51
Identity = 104/137 (75.91%), Postives = 115/137 (83.94%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60
           MEDY Y+RN+IP+FGNWEWNDHLPF+ CFE+SRIAG+P   DLYVAGDLY+NDVVTPAMI
Sbjct: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI 60

Query: 61  VVPRPRRKRDRHGKQEKQQKWTESPPQVTLH--PPKPMPKPVDEDLYKISPN-PCAKPKK 120
           VVPRPRRKRDR GKQ K++KW  SP     H    KPMPKPVDEDLYKISP+   AK KK
Sbjct: 61  VVPRPRRKRDRQGKQSKKEKWG-SPSNGMSHNYSTKPMPKPVDEDLYKISPDLLAAKSKK 120

Query: 121 KRGLSYITSCFVPTCLI 135
           KRGLSYIT+CFVPTCLI
Sbjct: 121 KRGLSYITNCFVPTCLI 136

[Close]

BLAST of CmaCh08G002670 vs. TrEMBL
Match: A0A0B0MSN2_GOSAR (Atp-dependent rna helicase dbp7 OS=Gossypium arboreum GN=F383_27938 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.6e-37
Identity = 87/146 (59.59%), Postives = 106/146 (72.60%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAG-----YPDVRDLYVAGDLYQNDVV 60
           M+DY Y R+ +P FG+W+WN+ LPFTQCFE++R AG     Y + RDLYVAGDLY NDVV
Sbjct: 1   MDDY-YTRSHVPAFGSWDWNNDLPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYDNDVV 60

Query: 61  TPAMIVVPRPRRK-RDRHGKQEKQQKW-----TESPPQVTLHPPKPMPKPVDEDLYKISP 120
           TPAMIVVPR R+K R  + K+ K+Q W      ESP    LH  +P PKPVDEDLYKISP
Sbjct: 61  TPAMIVVPRRRKKGRQSNDKEGKRQNWEINDVKESPSPTPLH--RPTPKPVDEDLYKISP 120

Query: 121 NPC-AKPKKKRGLSYITSCFVPTCLI 135
           +   AKP+KKRGLS+  SC VPTC++
Sbjct: 121 HLLYAKPRKKRGLSFFASCMVPTCVL 143

[Close]

BLAST of CmaCh08G002670 vs. TrEMBL
Match: A0A0D2PA14_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G159300 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.5e-37
Identity = 87/146 (59.59%), Postives = 106/146 (72.60%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAG-----YPDVRDLYVAGDLYQNDVV 60
           M+DY Y R+ +P FG+W+WN+ LPFTQCFE++R AG     Y + RDLYVAGDLY NDVV
Sbjct: 1   MDDY-YTRSHVPAFGSWDWNNDLPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYDNDVV 60

Query: 61  TPAMIVVPRPRRK-RDRHGKQEKQQKW-----TESPPQVTLHPPKPMPKPVDEDLYKISP 120
           TPAMIVVPR R+K R  + K+ K+Q W      ESP    LH  +P PKPVDEDLYKISP
Sbjct: 61  TPAMIVVPRRRKKGRKSNDKEGKRQNWEINDVKESPSPTPLH--RPTPKPVDEDLYKISP 120

Query: 121 NPC-AKPKKKRGLSYITSCFVPTCLI 135
           +   AKP+KKRGLS+  SC VPTC++
Sbjct: 121 HLLYAKPRKKRGLSFFASCMVPTCVL 143

[Close]

BLAST of CmaCh08G002670 vs. TrEMBL
Match: A0A0B0MMT2_GOSAR (RPM1-interacting 4-like protein OS=Gossypium arboreum GN=F383_01439 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 7.7e-37
Identity = 84/141 (59.57%), Postives = 104/141 (73.76%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAG-----YPDVRDLYVAGDLYQNDVV 60
           M+DY Y+R+ +P FG+W+WN+ LPFTQCFE +R  G     Y + RDLYVAGDLY+NDVV
Sbjct: 1   MDDY-YRRSHVPAFGSWDWNNDLPFTQCFETARPTGMLRYSYSEDRDLYVAGDLYENDVV 60

Query: 61  TPAMIVVPRPRRK-RDRHGKQEKQQKWTESPPQVTLHP-PKPMPKPVDEDLYKISPNPC- 120
           TPAMIVVPR R K    H K+ K+Q+W  S  +    P P+P PKPVDEDLYKISP+   
Sbjct: 61  TPAMIVVPRRRTKVGQTHSKEGKKQRWEVSDGKEAPEPRPRPTPKPVDEDLYKISPDLLY 120

Query: 121 AKPKKKRGLSYITSCFVPTCL 134
           AKPKKKRGLS+ +SC +PTC+
Sbjct: 121 AKPKKKRGLSFFSSCLLPTCV 140

[Close]

BLAST of CmaCh08G002670 vs. TrEMBL
Match: A0A061DMX9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_002679 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.0e-36
Identity = 85/144 (59.03%), Postives = 104/144 (72.22%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAG-----YPDVRDLYVAGDLYQNDVV 60
           M+D+ Y+R+ +P FG+W+WN+ LPFTQCFE++R AG     Y + RDLYVAGDLY+NDVV
Sbjct: 1   MDDF-YRRSHVPAFGSWDWNNDLPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYENDVV 60

Query: 61  TPAMIVVPRPRRK-RDRHGKQEKQQKWTESPPQVTLHP---PKPMPKPVDEDLYKISPNP 120
           TPAMIVVPR R K R  H K+ K+Q W  S  +    P   P+P PKPVDEDLYKISP  
Sbjct: 61  TPAMIVVPRRRTKVRQSHVKEGKKQNWEVSDVKEPASPTPLPRPTPKPVDEDLYKISPEL 120

Query: 121 C-AKPKKKRGLSYITSCFVPTCLI 135
             AKPKKKRGL + +SC VPTC +
Sbjct: 121 LYAKPKKKRGLGFFSSCLVPTCAL 143

[Close]

BLAST of CmaCh08G002670 vs. TAIR10
Match: AT5G48500.1 (AT5G48500.1 unknown protein)

HSP 1 Score: 105.9 bits (263), Expect = 1.9e-23
Identity = 67/163 (41.10%), Postives = 87/163 (53.37%), Query Frame = 1


Query: 3   DYDY------QRNFIPTFGNWEWNDHLPFTQCFEAS--------RIAGYPDVRDLYVAGD 62
           DY+Y      +R  +P FG+W+WND +PFTQCFE +          A YP  RDLY+AGD
Sbjct: 2   DYEYGGGEYCRRGHVPAFGSWDWNDAVPFTQCFETATTQQPAFLHYASYPQDRDLYLAGD 61

Query: 63  LYQN-DVVTPAMIVVPR--------PRRKRDRHGKQEKQQKWTESPPQVTLHPPKPM--- 122
           LY N  +V PA+I+VPR        P  K+    KQ+   K         +  P P+   
Sbjct: 62  LYDNHHLVAPAVIIVPRRRAKVGQEPAEKKRNVSKQQHNYKTEAREFNAPVSCPTPVVKR 121

Query: 123 ----PKPVDEDLYKISPNPCA-KPKKKR---GLSYITSCFVPT 132
               PKPVDEDLYK+SP   + K K+KR   G   I+ CF+PT
Sbjct: 122 RMKAPKPVDEDLYKVSPQLLSVKSKRKRGGGGFGCISRCFLPT 164

[Close]

BLAST of CmaCh08G002670 vs. NCBI nr
Match: gi|778727195|ref|XP_004150335.2| (PREDICTED: uncharacterized protein LOC101219200 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 2.7e-51
Identity = 104/137 (75.91%), Postives = 115/137 (83.94%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60
           MEDY Y+RN+IP+FGNWEWNDHLPF+ CFE+SRIAG+P   DLYVAGDLY+NDVVTPAMI
Sbjct: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI 60

Query: 61  VVPRPRRKRDRHGKQEKQQKWTESPPQVTLH--PPKPMPKPVDEDLYKISPN-PCAKPKK 120
           VVPRPRRKRDR GKQ K++KW  SP     H    KPMPKPVDEDLYKISP+   AK KK
Sbjct: 61  VVPRPRRKRDRQGKQSKKEKWG-SPSNGMSHNYSTKPMPKPVDEDLYKISPDLLAAKSKK 120

Query: 121 KRGLSYITSCFVPTCLI 135
           KRGLSYIT+CFVPTCLI
Sbjct: 121 KRGLSYITNCFVPTCLI 136

[Close]

BLAST of CmaCh08G002670 vs. NCBI nr
Match: gi|728819725|gb|KHG03357.1| (atp-dependent rna helicase dbp7 [Gossypium arboreum])

HSP 1 Score: 162.9 bits (411), Expect = 3.8e-37
Identity = 87/146 (59.59%), Postives = 106/146 (72.60%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAG-----YPDVRDLYVAGDLYQNDVV 60
           M+DY Y R+ +P FG+W+WN+ LPFTQCFE++R AG     Y + RDLYVAGDLY NDVV
Sbjct: 1   MDDY-YTRSHVPAFGSWDWNNDLPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYDNDVV 60

Query: 61  TPAMIVVPRPRRK-RDRHGKQEKQQKW-----TESPPQVTLHPPKPMPKPVDEDLYKISP 120
           TPAMIVVPR R+K R  + K+ K+Q W      ESP    LH  +P PKPVDEDLYKISP
Sbjct: 61  TPAMIVVPRRRKKGRQSNDKEGKRQNWEINDVKESPSPTPLH--RPTPKPVDEDLYKISP 120

Query: 121 NPC-AKPKKKRGLSYITSCFVPTCLI 135
           +   AKP+KKRGLS+  SC VPTC++
Sbjct: 121 HLLYAKPRKKRGLSFFASCMVPTCVL 143

[Close]

BLAST of CmaCh08G002670 vs. NCBI nr
Match: gi|823189703|ref|XP_012490918.1| (PREDICTED: uncharacterized protein LOC105803339 [Gossypium raimondii])

HSP 1 Score: 162.5 bits (410), Expect = 5.0e-37
Identity = 87/146 (59.59%), Postives = 106/146 (72.60%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAG-----YPDVRDLYVAGDLYQNDVV 60
           M+DY Y R+ +P FG+W+WN+ LPFTQCFE++R AG     Y + RDLYVAGDLY NDVV
Sbjct: 1   MDDY-YTRSHVPAFGSWDWNNDLPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYDNDVV 60

Query: 61  TPAMIVVPRPRRK-RDRHGKQEKQQKW-----TESPPQVTLHPPKPMPKPVDEDLYKISP 120
           TPAMIVVPR R+K R  + K+ K+Q W      ESP    LH  +P PKPVDEDLYKISP
Sbjct: 61  TPAMIVVPRRRKKGRKSNDKEGKRQNWEINDVKESPSPTPLH--RPTPKPVDEDLYKISP 120

Query: 121 NPC-AKPKKKRGLSYITSCFVPTCLI 135
           +   AKP+KKRGLS+  SC VPTC++
Sbjct: 121 HLLYAKPRKKRGLSFFASCMVPTCVL 143

[Close]

BLAST of CmaCh08G002670 vs. NCBI nr
Match: gi|728814943|gb|KHG01682.1| (RPM1-interacting 4 -like protein [Gossypium arboreum])

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-36
Identity = 84/141 (59.57%), Postives = 104/141 (73.76%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAG-----YPDVRDLYVAGDLYQNDVV 60
           M+DY Y+R+ +P FG+W+WN+ LPFTQCFE +R  G     Y + RDLYVAGDLY+NDVV
Sbjct: 1   MDDY-YRRSHVPAFGSWDWNNDLPFTQCFETARPTGMLRYSYSEDRDLYVAGDLYENDVV 60

Query: 61  TPAMIVVPRPRRK-RDRHGKQEKQQKWTESPPQVTLHP-PKPMPKPVDEDLYKISPNPC- 120
           TPAMIVVPR R K    H K+ K+Q+W  S  +    P P+P PKPVDEDLYKISP+   
Sbjct: 61  TPAMIVVPRRRTKVGQTHSKEGKKQRWEVSDGKEAPEPRPRPTPKPVDEDLYKISPDLLY 120

Query: 121 AKPKKKRGLSYITSCFVPTCL 134
           AKPKKKRGLS+ +SC +PTC+
Sbjct: 121 AKPKKKRGLSFFSSCLLPTCV 140

[Close]

BLAST of CmaCh08G002670 vs. NCBI nr
Match: gi|590713307|ref|XP_007049605.1| (Uncharacterized protein TCM_002679 [Theobroma cacao])

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-36
Identity = 85/144 (59.03%), Postives = 104/144 (72.22%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAG-----YPDVRDLYVAGDLYQNDVV 60
           M+D+ Y+R+ +P FG+W+WN+ LPFTQCFE++R AG     Y + RDLYVAGDLY+NDVV
Sbjct: 1   MDDF-YRRSHVPAFGSWDWNNDLPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYENDVV 60

Query: 61  TPAMIVVPRPRRK-RDRHGKQEKQQKWTESPPQVTLHP---PKPMPKPVDEDLYKISPNP 120
           TPAMIVVPR R K R  H K+ K+Q W  S  +    P   P+P PKPVDEDLYKISP  
Sbjct: 61  TPAMIVVPRRRTKVRQSHVKEGKKQNWEVSDVKEPASPTPLPRPTPKPVDEDLYKISPEL 120

Query: 121 C-AKPKKKRGLSYITSCFVPTCLI 135
             AKPKKKRGL + +SC VPTC +
Sbjct: 121 LYAKPKKKRGLGFFSSCLVPTCAL 143

The following BLAST results are available for this feature:

BLAST of CmaCh08G002670 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh08G002670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA54_CUCSA	1.9e-51	75.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G372860 PE=4 SV=1	[more]
A0A0B0MSN2_GOSAR	2.6e-37	59.59	Atp-dependent rna helicase dbp7 OS=Gossypium arboreum GN=F383_27938 PE=4 SV=1	[more]
A0A0D2PA14_GOSRA	3.5e-37	59.59	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G159300 PE=4 SV=1	[more]
A0A0B0MMT2_GOSAR	7.7e-37	59.57	RPM1-interacting 4-like protein OS=Gossypium arboreum GN=F383_01439 PE=4 SV=1	[more]
A0A061DMX9_THECC	1.0e-36	59.03	Uncharacterized protein OS=Theobroma cacao GN=TCM_002679 PE=4 SV=1	[more]

BLAST of CmaCh08G002670 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G48500.1	1.9e-23	41.10	unknown protein	[more]

BLAST of CmaCh08G002670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778727195\|ref\|XP_004150335.2\|	2.7e-51	75.91	PREDICTED: uncharacterized protein LOC101219200 [Cucumis sativus]	[more]
gi\|728819725\|gb\|KHG03357.1\|	3.8e-37	59.59	atp-dependent rna helicase dbp7 [Gossypium arboreum]	[more]
gi\|823189703\|ref\|XP_012490918.1\|	5.0e-37	59.59	PREDICTED: uncharacterized protein LOC105803339 [Gossypium raimondii]	[more]
gi\|728814943\|gb\|KHG01682.1\|	1.1e-36	59.57	RPM1-interacting 4 -like protein [Gossypium arboreum]	[more]
gi\|590713307\|ref\|XP_007049605.1\|	1.4e-36	59.03	Uncharacterized protein TCM_002679 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0080167	response to karrikin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G002670.1	CmaCh08G002670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33699	FAMILY NOT NAMED	coord: 1..134 score: 7.0
None	No IPR available	PANTHER	PTHR33699:SF2	SUBFAMILY NOT NAMED	coord: 1..134 score: 7.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh08G002670	Cucsa.388060	Cucumber (Gy14) v1	cgycmaB1079
CmaCh08G002670	Cla014867	Watermelon (97103) v1	cmawmB856
CmaCh08G002670	Csa7G372860	Cucumber (Chinese Long) v2	cmacuB914
CmaCh08G002670	ClCG09G008150	Watermelon (Charleston Gray)	cmawcgB786
CmaCh08G002670	CSPI07G15120	Wild cucumber (PI 183967)	cmacpiB934
CmaCh08G002670	CmoCh08G002650	Cucurbita moschata (Rifu)	cmacmoB913
CmaCh08G002670	CmoCh17G012850	Cucurbita moschata (Rifu)	cmacmoB888
CmaCh08G002670	Lsi02G021680	Bottle gourd (USVL1VR-Ls)	cmalsiB822
CmaCh08G002670	Cp4.1LG12g10660	Cucurbita pepo (Zucchini)	cmacpeB896
CmaCh08G002670	Cp4.1LG13g07050	Cucurbita pepo (Zucchini)	cmacpeB911
CmaCh08G002670	CsaV3_7G026890	Cucumber (Chinese Long) v3	cmacucB1084
CmaCh08G002670	Cla97C09G170820	Watermelon (97103) v2	cmawmbB940
CmaCh08G002670	Bhi09G001015	Wax gourd	cmawgoB1130
CmaCh08G002670	CsGy7G013610	Cucumber (Gy14) v2	cgybcmaB973
CmaCh08G002670	Carg11495	Silver-seed gourd	carcmaB0021
CmaCh08G002670	Carg05090	Silver-seed gourd	carcmaB0112

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh08G002670	CmaCh17G013150	Cucurbita maxima (Rimu)	cmacmaB374

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh08G002670	Melon (DHL92) v3.6.1	cmamedB926
CmaCh08G002670	Melon (DHL92) v3.6.1	cmamedB933
CmaCh08G002670	Melon (DHL92) v3.5.1	cmameB828
CmaCh08G002670	Melon (DHL92) v3.5.1	cmameB834