CsaV3_7G004180 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G004180
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr7 : 3053810 .. 3056495 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTGTTCTTATATTTACAATATTGATATGTACTTAGTGTAAAATTGTTACCGATTATTACTAACTTATATGGTTTATAATAACCTTATATAATAAGATTAAAATGAAAATGATTGTATTCTTATGTAAAAGAAAAAACGTAATAATTAGAAGTGCAAAGTTTTGAGGTGCCATCGTTTCTACAAAAGTCCGCTCTTTTTTTACTTCCTTGGAAAAACTGAAGACGTTTCTCGTCAAATGATGCTCTTCTTGAAACGCCATTGCAGTAGTAGTTTCACCTCTCAAAATTTCAAATATTCTACTCACCCGTCAATCAAACTGTCTCAAATTCTCCAATTTTGCAAGTCTGGCTTACTCAACGATGCGCTACACCTCTTAAACTCCATTGATTTGTACGATTCTAGAATTAACAAACCACTTCTCTACGCTTCTCTCTTACAAACCTGCATCAAGGTAGATTCCTTCACCCGTGGCCGTCAATTTCATGCCCATGTTGTTAAATCTGGCCTTGAGACTGACCGCTTTGTTGGGAATAGCTTGCTTTCTCTCTACTTTAAATTGGGTTCAGATTCTCTGCTGACTCGAAGAGTATTTGATGGTCTTTTTGTCAAAGATGTGGTTTCTTGGGCATCCATGATTACGGGGTATGTTCGAGAAGGTAAATCTGGAATTGCGATTGAATTGTTTTGGGATATGTTGGATTCGGGGATTGAGCCGAATGGCTTTACTTTATCTGCTGTGATCAAAGCGTGCTCCGAGATTGGGAATTTGGTACTTGGTAAGTGCTTTCATGGGGTTGTTGTAAGGCGTGGATTCGATTCAAATCCTGTCATTTTGAGTTCTTTGATTGATATGTACGGGAGAAACTCTGTGTCAAGTGATGCACGCCAACTGTTTGATGAATTGCTTGAACCAGATCCAGTATGTTGGACAACGGTTATTTCAGCGTTTACAAGGAACGATTTGTATGAGGAAGCATTGGGGTTCTTTTATTTGAAGCATAGAGCTCATAGGTTGTGTCCTGATAATTATACATTTGGAAGTGTATTGACTGCCTGTGGTAATTTGGGGAGGTTGAGGCAAGGTGAAGAGATCCATGCTAAGGTGATTGCTTACGGATTTAGTGGGAATGTAGTGACTGAAAGTAGTCTGGTGGATATGTATGGAAAATGTGGAGCGGTTGAGAAATCTCAACGCTTATTCGATAGAATGTCGAACAGGAACTCAGTTTCATGGTCTGCATTGCTTGCAGTATATTGCCACAATGGTGACTACGAAAAGGCTGTAAATCTTTTCAGAGAGATGAAGGAGGTTGACCTCTACAGTTTTGGGACAGTTATTCGTGCGTGTGCCGGGTTGGCAGCTGTTACTCCAGGGAAGGAGATTCACTGTCAGTATATAAGAAAGGGTGGCTGGAGAGATGTCATTGTAGAATCAGCTCTAGTCGACTTGTATGCAAAATGTGGTTGCATTAATTTTGCATATAGAGTCTTTGATCGTATGCCCACAAGAAACTTGATCACGTGGAATTCGATGATTCATGGTTTTGCTCAGAATGGAAGTAGTGGAATTGCTATTCAGATCTTTGAAGCAATGATTAAGGAAGGGATTAAGCCTGATTGTATCAGTTTTATTGGTTTACTTTTTGCTTGTAGTCATACAGGTTTGGTCGATCAAGCACGGCACTACTTTGATCTAATGACTGGGAAATATGGAATTAAACCAGGAGTTGAGCATTATAACTGCATGGTTGATCTTCTAGGCCGTGCCGGGCTGCTAGAAGAAGCTGAGAATTTGATAGAAAATGCAGAATGTAGAAATGATTCGTCTCTTTGGCTGGTTCTTCTAGGAGCTTGCACTACTACATGCACGAACTCTGCTACTGCAGAACGCATTGCCAAGAAGTTGATGGAGCTTGAGCCTCAATGCTATTTAAGTTATGTTCACCTGGCTAATGTTTATAGAGCAGTAGGCCGATGGGATGACGCTGTAAAGGTTAGAGAGTTGATGAAAAACCGACAGCTGAAGAAGATGCCAGGTCAGAGTTGGATGTAAAGAGGTAAATCATGAAGGACAAGGTTATGAGCCTCATATTGAACCTGAATTCAAGACTGATGATGAGTTGACATTGATTATTAAAACATGATCATGTCCTTTTGCTCTTCCAAGATGAAGAAGAACAGCCATGAGAAGCCACTGAATATATCAATGATATACCAACCTGGTTGAAAAGGTTATATAGAGAGAGTTAGTGGATTTTCAGTTAATTGGTGTGGAGAAGAAGAGATAGACTTGCCGGCATTAACAACAAGAAATTGAATGTTTTGTTTTGATTTTTCTTTCTTTTCCCCCTGGAAAAACTAACTTATTTATTTGTTACATGTGTTCTTACCATTCTTTACATCTCTCCATTTCAACAGAAATAAATGGTTGTGGAATCAGCAAGAGCACCATCTTTGGATAATTAATTAGCATGTCAGTGATTCAAATCTTCATCATCCAGTTGTACTATTTTTTAAATGGTAAGAAACAATTTGGTGTGGAGCCATATCGTTTCCTTCTAACCAAATAGATTGTCAAGGCATCTATTGAACCTAAAATTGGCTGTTAATTCTTGTTAAGCACCGTTTGAGATTTAGAATAATTAACCGTGAAAAAAAGTAATATATTATTTGATAAATATCGG

mRNA sequence

ATGATGCTCTTCTTGAAACGCCATTGCAGTAGTAGTTTCACCTCTCAAAATTTCAAATATTCTACTCACCCGTCAATCAAACTGTCTCAAATTCTCCAATTTTGCAAGTCTGGCTTACTCAACGATGCGCTACACCTCTTAAACTCCATTGATTTGTACGATTCTAGAATTAACAAACCACTTCTCTACGCTTCTCTCTTACAAACCTGCATCAAGGTAGATTCCTTCACCCGTGGCCGTCAATTTCATGCCCATGTTGTTAAATCTGGCCTTGAGACTGACCGCTTTGTTGGGAATAGCTTGCTTTCTCTCTACTTTAAATTGGGTTCAGATTCTCTGCTGACTCGAAGAGTATTTGATGGTCTTTTTGTCAAAGATGTGGTTTCTTGGGCATCCATGATTACGGGGTATGTTCGAGAAGGTAAATCTGGAATTGCGATTGAATTGTTTTGGGATATGTTGGATTCGGGGATTGAGCCGAATGGCTTTACTTTATCTGCTGTGATCAAAGCGTGCTCCGAGATTGGGAATTTGGTACTTGGTAAGTGCTTTCATGGGGTTGTTGTAAGGCGTGGATTCGATTCAAATCCTGTCATTTTGAGTTCTTTGATTGATATGTACGGGAGAAACTCTGTGTCAAGTGATGCACGCCAACTGTTTGATGAATTGCTTGAACCAGATCCAGTATGTTGGACAACGGTTATTTCAGCGTTTACAAGGAACGATTTGTATGAGGAAGCATTGGGGTTCTTTTATTTGAAGCATAGAGCTCATAGGTTGTGTCCTGATAATTATACATTTGGAAGTGTATTGACTGCCTGTGGTAATTTGGGGAGGTTGAGGCAAGGTGAAGAGATCCATGCTAAGGTGATTGCTTACGGATTTAGTGGGAATGTAGTGACTGAAAGTAGTCTGGTGGATATGTATGGAAAATGTGGAGCGGTTGAGAAATCTCAACGCTTATTCGATAGAATGTCGAACAGGAACTCAGTTTCATGGTCTGCATTGCTTGCAGTATATTGCCACAATGGTGACTACGAAAAGGCTGTAAATCTTTTCAGAGAGATGAAGGAGGTTGACCTCTACAGTTTTGGGACAGTTATTCGTGCGTGTGCCGGGTTGGCAGCTGTTACTCCAGGGAAGGAGATTCACTGTCAGTATATAAGAAAGGGTGGCTGGAGAGATGTCATTGTAGAATCAGCTCTAGTCGACTTGTATGCAAAATGTGGTTGCATTAATTTTGCATATAGAGTCTTTGATCGTATGCCCACAAGAAACTTGATCACGTGGAATTCGATGATTCATGGTTTTGCTCAGAATGGAAGTAGTGGAATTGCTATTCAGATCTTTGAAGCAATGATTAAGGAAGGGATTAAGCCTGATTGTATCAGTTTTATTGGTTTACTTTTTGCTTGTAGTCATACAGGTTTGGTCGATCAAGCACGGCACTACTTTGATCTAATGACTGGGAAATATGGAATTAAACCAGGAGTTGAGCATTATAACTGCATGGTTGATCTTCTAGGCCGTGCCGGGCTGCTAGAAGAAGCTGAGAATTTGATAGAAAATGCAGAATGTAGAAATGATTCGTCTCTTTGGCTGGTTCTTCTAGGAGCTTGCACTACTACATGCACGAACTCTGCTACTGCAGAACGCATTGCCAAGAAGTTGATGGAGCTTGAGCCTCAATGCTATTTAAGTTATGTTCACCTGGCTAATGTTTATAGAGCAGTAGGCCGATGGGATGACGCTGTAAAGGTTAGAGAGTTGATGAAAAACCGACAGCTGAAGAAGATGCCAGGTCAGAGTTGGATGTAA

Coding sequence (CDS)

ATGATGCTCTTCTTGAAACGCCATTGCAGTAGTAGTTTCACCTCTCAAAATTTCAAATATTCTACTCACCCGTCAATCAAACTGTCTCAAATTCTCCAATTTTGCAAGTCTGGCTTACTCAACGATGCGCTACACCTCTTAAACTCCATTGATTTGTACGATTCTAGAATTAACAAACCACTTCTCTACGCTTCTCTCTTACAAACCTGCATCAAGGTAGATTCCTTCACCCGTGGCCGTCAATTTCATGCCCATGTTGTTAAATCTGGCCTTGAGACTGACCGCTTTGTTGGGAATAGCTTGCTTTCTCTCTACTTTAAATTGGGTTCAGATTCTCTGCTGACTCGAAGAGTATTTGATGGTCTTTTTGTCAAAGATGTGGTTTCTTGGGCATCCATGATTACGGGGTATGTTCGAGAAGGTAAATCTGGAATTGCGATTGAATTGTTTTGGGATATGTTGGATTCGGGGATTGAGCCGAATGGCTTTACTTTATCTGCTGTGATCAAAGCGTGCTCCGAGATTGGGAATTTGGTACTTGGTAAGTGCTTTCATGGGGTTGTTGTAAGGCGTGGATTCGATTCAAATCCTGTCATTTTGAGTTCTTTGATTGATATGTACGGGAGAAACTCTGTGTCAAGTGATGCACGCCAACTGTTTGATGAATTGCTTGAACCAGATCCAGTATGTTGGACAACGGTTATTTCAGCGTTTACAAGGAACGATTTGTATGAGGAAGCATTGGGGTTCTTTTATTTGAAGCATAGAGCTCATAGGTTGTGTCCTGATAATTATACATTTGGAAGTGTATTGACTGCCTGTGGTAATTTGGGGAGGTTGAGGCAAGGTGAAGAGATCCATGCTAAGGTGATTGCTTACGGATTTAGTGGGAATGTAGTGACTGAAAGTAGTCTGGTGGATATGTATGGAAAATGTGGAGCGGTTGAGAAATCTCAACGCTTATTCGATAGAATGTCGAACAGGAACTCAGTTTCATGGTCTGCATTGCTTGCAGTATATTGCCACAATGGTGACTACGAAAAGGCTGTAAATCTTTTCAGAGAGATGAAGGAGGTTGACCTCTACAGTTTTGGGACAGTTATTCGTGCGTGTGCCGGGTTGGCAGCTGTTACTCCAGGGAAGGAGATTCACTGTCAGTATATAAGAAAGGGTGGCTGGAGAGATGTCATTGTAGAATCAGCTCTAGTCGACTTGTATGCAAAATGTGGTTGCATTAATTTTGCATATAGAGTCTTTGATCGTATGCCCACAAGAAACTTGATCACGTGGAATTCGATGATTCATGGTTTTGCTCAGAATGGAAGTAGTGGAATTGCTATTCAGATCTTTGAAGCAATGATTAAGGAAGGGATTAAGCCTGATTGTATCAGTTTTATTGGTTTACTTTTTGCTTGTAGTCATACAGGTTTGGTCGATCAAGCACGGCACTACTTTGATCTAATGACTGGGAAATATGGAATTAAACCAGGAGTTGAGCATTATAACTGCATGGTTGATCTTCTAGGCCGTGCCGGGCTGCTAGAAGAAGCTGAGAATTTGATAGAAAATGCAGAATGTAGAAATGATTCGTCTCTTTGGCTGGTTCTTCTAGGAGCTTGCACTACTACATGCACGAACTCTGCTACTGCAGAACGCATTGCCAAGAAGTTGATGGAGCTTGAGCCTCAATGCTATTTAAGTTATGTTCACCTGGCTAATGTTTATAGAGCAGTAGGCCGATGGGATGACGCTGTAAAGGTTAGAGAGTTGATGAAAAACCGACAGCTGAAGAAGATGCCAGGTCAGAGTTGGATGTAA

Protein sequence

MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGACTTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMPGQSWM
Homology
[Close]
BLAST of CsaV3_7G004180 vs. NCBI nr
Match: XP_004137012.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g03540 [Cucumis sativus] >KGN43587.1 hypothetical protein Csa_7G047230 [Cucumis sativus])

HSP 1 Score: 1245.3 bits (3221), Expect = 0.0e+00
Identity = 605/605 (100.00%), Postives = 605/605 (100.00%), Query Frame = 0 

Query: 1   MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60
           MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP
Sbjct: 1   MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60

Query: 61  LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120
           LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD
Sbjct: 61  LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120

Query: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180
           GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL
Sbjct: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180

Query: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240
           GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR
Sbjct: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240

Query: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300
           NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV
Sbjct: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300

Query: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360
           TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD
Sbjct: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360

Query: 361 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD 420
           LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD
Sbjct: 361 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD 420

Query: 421 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480
           RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ
Sbjct: 421 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480

Query: 481 ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC 540
           ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC
Sbjct: 481 ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC 540

Query: 541 TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP 600
           TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP
Sbjct: 541 TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP 600

Query: 601 GQSWM 606
           GQSWM
Sbjct: 601 GQSWM 605

[Close]
BLAST of CsaV3_7G004180 vs. NCBI nr
Match: XP_008455346.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g03540 [Cucumis melo])

HSP 1 Score: 1101.3 bits (2847), Expect = 0.0e+00
Identity = 535/605 (88.43%), Postives = 558/605 (92.23%), Query Frame = 0 

Query: 1   MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60
           MMLF KRHC+SSFTSQNFKYSTH S KL QILQFCKSGLLNDALH+LNS+DLYDSRINKP
Sbjct: 1   MMLFFKRHCTSSFTSQNFKYSTHLSNKLFQILQFCKSGLLNDALHILNSVDLYDSRINKP 60

Query: 61  LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120
           LLYASLLQTC KVDSF+ G QFHAHVVKSGLETDRFVGNSLLSLYFKLGS+ LLTRRVFD
Sbjct: 61  LLYASLLQTCTKVDSFSSGCQFHAHVVKSGLETDRFVGNSLLSLYFKLGSNCLLTRRVFD 120

Query: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180
           GLFVKDVVSWASMITGYVREGKSG+AIELFWDMLDSGIEPN FTLS VIKACSEIGNLVL
Sbjct: 121 GLFVKDVVSWASMITGYVREGKSGMAIELFWDMLDSGIEPNDFTLSTVIKACSEIGNLVL 180

Query: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240
           GKCFHGVVVRRGFDSNPVILSSLIDMYGRN +SS+ARQLFDELLEPDPVCWTTVISAFTR
Sbjct: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNYLSSEARQLFDELLEPDPVCWTTVISAFTR 240

Query: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300
           ND YEEALGFFYL HRA+RL PDNYTFGSVLTACGNLGRL+QGEEIHAKVIAYGF GNVV
Sbjct: 241 NDFYEEALGFFYLMHRAYRLSPDNYTFGSVLTACGNLGRLKQGEEIHAKVIAYGFGGNVV 300

Query: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360
            ESSLVDMYGKCGAVEKSQR+FDRMSNRNSVSWSALLAVYC NGD+EK V+LFREMK+VD
Sbjct: 301 VESSLVDMYGKCGAVEKSQRVFDRMSNRNSVSWSALLAVYCQNGDFEKVVSLFREMKKVD 360

Query: 361 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD 420
           LYSFGTV+RACAGLAAV PGKE+HCQYIRKGGWRDVIVESALVDLYAKCG I+FAYR+F+
Sbjct: 361 LYSFGTVLRACAGLAAVAPGKEVHCQYIRKGGWRDVIVESALVDLYAKCGSIDFAYRIFE 420

Query: 421 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480
           RMPTRNLIT                      AMIKEGIKPDCISFIGLLFACSHTGLVDQ
Sbjct: 421 RMPTRNLITXXXXXXXXXXXXXXXXXXXXXXAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480

Query: 481 ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC 540
           ARHYFDLMTG+YGIKPG+EHYNCMVDLLGRAGLLEEAENLIENA+CRNDS+LWLVLLGA 
Sbjct: 481 ARHYFDLMTGEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADCRNDSALWLVLLGAS 540

Query: 541 TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP 600
           T T TNSA AERIAKKLMELEPQCYLSYVHLAN YRAVGRWDDAVKVRELMKNRQLKKMP
Sbjct: 541 TATWTNSAIAERIAKKLMELEPQCYLSYVHLANFYRAVGRWDDAVKVRELMKNRQLKKMP 600

Query: 601 GQSWM 606
           GQSWM
Sbjct: 601 GQSWM 605

[Close]
BLAST of CsaV3_7G004180 vs. NCBI nr
Match: XP_022147827.1 (pentatricopeptide repeat-containing protein At1g03540 [Momordica charantia])

HSP 1 Score: 1043.9 bits (2698), Expect = 2.1e-301
Identity = 500/605 (82.64%), Postives = 549/605 (90.74%), Query Frame = 0 

Query: 1   MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60
           M LF KRHC SSFT  N K  T+ S K SQ+LQ C+SGLL+DALH+LNS+DL+D+  NKP
Sbjct: 1   MRLFFKRHC-SSFTFHNLKNFTYASTKGSQVLQHCRSGLLHDALHILNSVDLFDTATNKP 60

Query: 61  LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120
           +LYASLLQTCIKV SF+ GRQ HAHVVKSGLETDRFVGNSLLSLYFKLGSD LLTRRVFD
Sbjct: 61  ILYASLLQTCIKVASFSHGRQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDYLLTRRVFD 120

Query: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180
           GLFVKDVVSW SMITGYVREGK G AIELFWDMLD GIEPNGFT+SAVIKACSEIGNLVL
Sbjct: 121 GLFVKDVVSWTSMITGYVREGKPGNAIELFWDMLDLGIEPNGFTISAVIKACSEIGNLVL 180

Query: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240
           G+CFHG+V+R GFDSN VI+SSLIDMYGRN  S+DARQLFDELLEPD +CWT+VISAFTR
Sbjct: 181 GRCFHGLVLRHGFDSNHVIVSSLIDMYGRNCASNDARQLFDELLEPDAICWTSVISAFTR 240

Query: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300
           NDLYEEALGFFY   R +RL PD +TFG+VLTACGNLGRLRQGEE+HAKVIA+G  GNVV
Sbjct: 241 NDLYEEALGFFYSMQRTYRLSPDGFTFGTVLTACGNLGRLRQGEEVHAKVIAHGLGGNVV 300

Query: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360
            ESSLVDMYGKCGAV+KSQ +FDRMS RNSVSWSALL VYC NGD+E  +NLFREM+EVD
Sbjct: 301 VESSLVDMYGKCGAVDKSQLVFDRMSRRNSVSWSALLGVYCQNGDFEMVINLFREMEEVD 360

Query: 361 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD 420
           LYSFGTVIRACAGLAAVT GKE+HCQY+RKGGWRDVIVESALVDLYAKCGCI+FAYR+F+
Sbjct: 361 LYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFE 420

Query: 421 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480
           +MP++NLITWNSMI GFAQNG  GIA+QIFE MIKEGIKPD ISFIG+LFACSHTGLVDQ
Sbjct: 421 QMPSKNLITWNSMIRGFAQNGQGGIALQIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQ 480

Query: 481 ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC 540
            RHYF LMT +YGIKPG+EHYNCMVDLLGR GLLEEAENLIENA+CRNDSSLW VLLGAC
Sbjct: 481 GRHYFALMTEQYGIKPGIEHYNCMVDLLGRTGLLEEAENLIENADCRNDSSLWQVLLGAC 540

Query: 541 TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP 600
            TTCTNSATAERIAKK+MELEP+ +LSYV LANVYRAVGRWDDA+K+R+LMKNRQ+KKMP
Sbjct: 541 -TTCTNSATAERIAKKMMELEPRHHLSYVLLANVYRAVGRWDDALKIRKLMKNRQVKKMP 600

Query: 601 GQSWM 606
           GQSW+
Sbjct: 601 GQSWI 603

[Close]
BLAST of CsaV3_7G004180 vs. NCBI nr
Match: XP_023529479.1 (pentatricopeptide repeat-containing protein At1g03540 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1020.4 bits (2637), Expect = 2.5e-294
Identity = 494/605 (81.65%), Postives = 540/605 (89.26%), Query Frame = 0 

Query: 1   MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60
           M LF+KRHC  SFTSQN K STHP  K SQILQFC S LL+DALH LNS+D +DS  NK 
Sbjct: 1   MRLFIKRHC-RSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKS 60

Query: 61  LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120
           +LYASLLQTC KV SFT GRQ HAHV+KSGLE DRFVGNSLLSLYFKLGSD  LTRRVFD
Sbjct: 61  ILYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFD 120

Query: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180
           GLFVKDVVSW SMIT YVREGK G AIELFWDMLD GIEPNGFTLSAVIKACSEIGNLVL
Sbjct: 121 GLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVL 180

Query: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240
           G+CFHG+VVR GF+SN VI+SSLIDMYGRN  SSDARQLFDE+ EPD +CWT+VISA TR
Sbjct: 181 GRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTR 240

Query: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300
           NDLYE+ALGFFYL  R + L PD +TFGSVLTAC NLGRLRQGEE+HAKVIA+G  GNVV
Sbjct: 241 NDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVV 300

Query: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360
            ESSLVDMYGKCGAVEKSQR+FDRMS RNSVSWSALL VYC NGD+EK +N+FR M+++D
Sbjct: 301 VESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKID 360

Query: 361 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD 420
           LYSFGTVIRACAGLAAVT GKE+HCQY+RKGGWRDVIVESALVDLYAKCGCI+FAYR+F+
Sbjct: 361 LYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFE 420

Query: 421 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480
           +MPTRNLITWNSMI GFAQNG SGI+I+IFE MIKEGIKPD ISFIG+LFACSHTGLVDQ
Sbjct: 421 QMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQ 480

Query: 481 ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC 540
            RHYF  MT +YGIKPG+EHYNCMVDLLGRAGLLEEAENLIENA+ RNDSSLW VLLGAC
Sbjct: 481 GRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGAC 540

Query: 541 TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP 600
           TT+ TNS TAERIAKK+MELEPQ +LSYV LANVYRAVGRWDDA+ +R+LMK+RQ+KK+P
Sbjct: 541 TTS-TNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVP 600

Query: 601 GQSWM 606
           GQSWM
Sbjct: 601 GQSWM 603

[Close]
BLAST of CsaV3_7G004180 vs. NCBI nr
Match: XP_022988714.1 (pentatricopeptide repeat-containing protein At1g03540 [Cucurbita maxima])

HSP 1 Score: 1018.8 bits (2633), Expect = 7.4e-294
Identity = 492/605 (81.32%), Postives = 541/605 (89.42%), Query Frame = 0 

Query: 1   MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60
           M LF+KRHC  SFTSQN K STHP  K SQILQFC SGLL+DALH LNS+D ++S  NK 
Sbjct: 1   MRLFIKRHC-RSFTSQNLKNSTHPPTKESQILQFCGSGLLHDALHTLNSLDSFNSTTNKS 60

Query: 61  LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120
           +LYASLLQTC KV SF+ GRQ HAHV+KSGLETDRFVGNSLLSLYFKLGSD  LTRRVFD
Sbjct: 61  ILYASLLQTCTKVASFSHGRQIHAHVLKSGLETDRFVGNSLLSLYFKLGSDFRLTRRVFD 120

Query: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180
           GLFVKDVVSW SMIT YVREGK G AIE FWDMLD GIEPNGFTLSAVIKACSEIGNL+L
Sbjct: 121 GLFVKDVVSWTSMITSYVREGKPGNAIEFFWDMLDLGIEPNGFTLSAVIKACSEIGNLIL 180

Query: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240
           G+CFHG+VVR GF+SN VI+SSLIDMYGRN  SSDARQLFDE+ EPD +CWT+VISA TR
Sbjct: 181 GRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTR 240

Query: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300
           NDLYE+ALGFFYL  R + L PD +TFGSVLTAC NLGRLRQGEE+HAKVIA+G  GNVV
Sbjct: 241 NDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVV 300

Query: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360
            ESSLVDMYGKCGA+EKSQ +FDRMS RNSVSWSALL VYC NGD+EK +N+FR M+++D
Sbjct: 301 VESSLVDMYGKCGAIEKSQLVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKID 360

Query: 361 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD 420
           LYSFGTVIRACAGLAAVT GKE+HCQY+RKGGWRDVIVESALVDLYAKCGCI+FAYR+F+
Sbjct: 361 LYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFE 420

Query: 421 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480
           RMPTRNLITWNSMI GFAQNG SGI+I+IFE MIKEGIKPD ISFIG+LFACSHTGLVDQ
Sbjct: 421 RMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQ 480

Query: 481 ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC 540
            RHYF LMT +YGIKPG+EHYNCMVDLLGRAGLLEEAENLIENA+ R+DSSLW VLLGAC
Sbjct: 481 GRHYFVLMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRSDSSLWQVLLGAC 540

Query: 541 TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP 600
           TT+ TNS TAERIAKK+MELEPQ +LSYV LANVYRAVGRWDDA+ VR+LMK+RQ+KK+P
Sbjct: 541 TTS-TNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTVRKLMKSRQVKKVP 600

Query: 601 GQSWM 606
           GQSWM
Sbjct: 601 GQSWM 603

[Close]
BLAST of CsaV3_7G004180 vs. TAIR10
Match: AT1G03540.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 728.8 bits (1880), Expect = 2.8e-210
Identity = 360/611 (58.92%), Postives = 451/611 (73.81%), Query Frame = 0 

Query: 2   MLFLKRHCSSSFTSQNFKYSTHPSI------KLSQILQFCKSGLLNDALHLLNSIDLYDS 61
           ++ LKRH      SQ+      PSI      K S+IL+ CK G L +A+ +LNS   + S
Sbjct: 3   LIILKRH-----FSQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNS--THSS 62

Query: 62  RI-NKPLLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLL 121
            I   P LYASLLQTC KV SF  G QFHAHVVKSGLETDR VGNSLLSLYFKLG     
Sbjct: 63  EIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRE 122

Query: 122 TRRVFDGLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSE 181
           TRRVFDG FVKD +SW SM++GYV   +   A+E+F +M+  G++ N FTLS+ +KACSE
Sbjct: 123 TRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSE 182

Query: 182 IGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTV 241
           +G + LG+CFHGVV+  GF+ N  I S+L  +YG N    DAR++FDE+ EPD +CWT V
Sbjct: 183 LGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAV 242

Query: 242 ISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYG 301
           +SAF++NDLYEEALG FY  HR   L PD  TFG+VLTACGNL RL+QG+EIH K+I  G
Sbjct: 243 LSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNG 302

Query: 302 FSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFR 361
              NVV ESSL+DMYGKCG+V +++++F+ MS +NSVSWSALL  YC NG++EKA+ +FR
Sbjct: 303 IGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFR 362

Query: 362 EMKEVDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINF 421
           EM+E DLY FGTV++ACAGLAAV  GKEIH QY+R+G + +VIVESAL+DLY K GCI+ 
Sbjct: 363 EMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDS 422

Query: 422 AYRVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSH 481
           A RV+ +M  RN+ITWN+M+   AQNG    A+  F  M+K+GIKPD ISFI +L AC H
Sbjct: 423 ASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGH 482

Query: 482 TGLVDQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWL 541
           TG+VD+ R+YF LM   YGIKPG EHY+CM+DLLGRAGL EEAENL+E AECRND+SLW 
Sbjct: 483 TGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWG 542

Query: 542 VLLGACTTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNR 601
           VLLG C      S  AERIAK++MELEP+ ++SYV L+N+Y+A+GR  DA+ +R+LM  R
Sbjct: 543 VLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRR 602

Query: 602 QLKKMPGQSWM 606
            + K  GQSW+
Sbjct: 603 GVAKTVGQSWI 606

[Close]
BLAST of CsaV3_7G004180 vs. TAIR10
Match: AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 382.5 bits (981), Expect = 4.9e-106
Identity = 200/545 (36.70%), Postives = 321/545 (58.90%), Query Frame = 0 

Query: 66  LLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVK 125
           +L T +KVDS   G+Q H   +K GL+    V NSL+++Y KL       R VFD +  +
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFG-FARTVFDNMSER 380

Query: 126 DVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEI-GNLVLGKCF 185
           D++SW S+I G  + G    A+ LF  +L  G++P+ +T+++V+KA S +   L L K  
Sbjct: 381 DLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQV 440

Query: 186 HGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLY 245
           H   ++    S+  + ++LID Y RN    +A  LF E    D V W  +++ +T++   
Sbjct: 441 HVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDG 500

Query: 246 EEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESS 305
            + L  F L H+      D++T  +V   CG L  + QG+++HA  I  G+  ++   S 
Sbjct: 501 HKTLKLFALMHKQGER-SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSG 560

Query: 306 LVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEV----D 365
           ++DMY KCG +  +Q  FD +   + V+W+ +++    NG+ E+A ++F +M+ +    D
Sbjct: 561 ILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPD 620

Query: 366 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD 425
            ++  T+ +A + L A+  G++IH   ++     D  V ++LVD+YAKCG I+ AY +F 
Sbjct: 621 EFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFK 680

Query: 426 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ 485
           R+   N+  WN+M+ G AQ+G     +Q+F+ M   GIKPD ++FIG+L ACSH+GLV +
Sbjct: 681 RIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSE 740

Query: 486 ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC 545
           A  +   M G YGIKP +EHY+C+ D LGRAGL+++AENLIE+      +S++  LL AC
Sbjct: 741 AYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAAC 800

Query: 546 TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP 605
                ++ T +R+A KL+ELEP    +YV L+N+Y A  +WD+    R +MK  ++KK P
Sbjct: 801 RVQ-GDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDP 860

[Close]
BLAST of CsaV3_7G004180 vs. TAIR10
Match: AT3G02330.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 369.4 bits (947), Expect = 4.3e-102
Identity = 206/607 (33.94%), Postives = 330/607 (54.37%), Query Frame = 0 

Query: 25  SIKLSQILQFC-KSGLLNDALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGRQFH 84
           S+  S I+  C ++ LL+ AL     +   ++ +++  +YAS+L++C  +     G Q H
Sbjct: 246 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS-IYASVLRSCAALSELRLGGQLH 305

Query: 85  AHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRV-FDGLFVKDVVSWASMITGYVREGK 144
           AH +KS    D  V  + L +Y K   D++   ++ FD     +  S+ +MITGY +E  
Sbjct: 306 AHALKSDFAADGIVRTATLDMYAK--CDNMQDAQILFDNSENLNRQSYNAMITGYSQEEH 365

Query: 145 SGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSS 204
              A+ LF  ++ SG+  +  +LS V +AC+ +  L  G   +G+ ++     +  + ++
Sbjct: 366 GFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANA 425

Query: 205 LIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCP 264
            IDMYG+    ++A ++FDE+   D V W  +I+A  +N    E L F ++     R+ P
Sbjct: 426 AIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL-FLFVSMLRSRIEP 485

Query: 265 DNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLF 324
           D +TFGS+L AC   G L  G EIH+ ++  G + N     SL+DMY KCG +E+++++ 
Sbjct: 486 DEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIH 545

Query: 325 DRMSNRNS--------------------VSWSALLAVYCHNGDYEKAVNLFREMKEV--- 384
            R   R +                    VSW+++++ Y      E A  LF  M E+   
Sbjct: 546 SRFFQRANVXXXXXXXXXXXXXXXXXXXVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT 605

Query: 385 -DLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRV 444
            D +++ TV+  CA LA+   GK+IH Q I+K    DV + S LVD+Y+KCG ++ +  +
Sbjct: 606 PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLM 665

Query: 445 FDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLV 504
           F++   R+ +TWN+MI G+A +G    AIQ+FE MI E IKP+ ++FI +L AC+H GL+
Sbjct: 666 FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI 725

Query: 505 DQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLG 564
           D+   YF +M   YG+ P + HY+ MVD+LG++G ++ A  LI       D  +W  LLG
Sbjct: 726 DKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 785

Query: 565 ACTTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKK 606
            CT    N   AE     L+ L+PQ   +Y  L+NVY   G W+    +R  M+  +LKK
Sbjct: 786 VCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKK 845

[Close]
BLAST of CsaV3_7G004180 vs. TAIR10
Match: AT5G09950.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 367.1 bits (941), Expect = 2.1e-101
Identity = 194/538 (36.06%), Postives = 317/538 (58.92%), Query Frame = 0 

Query: 78  RGRQFHAHVVKSGLETDRF-VGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMITG 137
           +GR+ H HV+ +GL      +GN L+++Y K GS +   RRVF  +  KD VSW SMITG
Sbjct: 331 KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIA-DARRVFYFMTDKDSVSWNSMITG 390

Query: 138 YVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSN 197
             + G    A+E +  M    I P  FTL + + +C+ +    LG+  HG  ++ G D N
Sbjct: 391 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN 450

Query: 198 PVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRND--LYEEALGFFYLK 257
             + ++L+ +Y      ++ R++F  + E D V W ++I A  R++  L E  + F   +
Sbjct: 451 VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQ 510

Query: 258 HRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGA 317
               +L  +  TF SVL+A  +L     G++IH   +    +    TE++L+  YGKCG 
Sbjct: 511 RAGQKL--NRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGE 570

Query: 318 VEKSQRLFDRMS-NRNSVSWSALLAVYCHNGDYEKAVNLFREM----KEVDLYSFGTVIR 377
           ++  +++F RM+  R++V+W+++++ Y HN    KA++L   M    + +D + + TV+ 
Sbjct: 571 MDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLS 630

Query: 378 ACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLIT 437
           A A +A +  G E+H   +R     DV+V SALVD+Y+KCG +++A R F+ MP RN  +
Sbjct: 631 AFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS 690

Query: 438 WNSMIHGFAQNGSSGIAIQIFEAMIKEG-IKPDCISFIGLLFACSHTGLVDQARHYFDLM 497
           WNSMI G+A++G    A+++FE M  +G   PD ++F+G+L ACSH GL+++   +F+ M
Sbjct: 691 WNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESM 750

Query: 498 TGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGACTTTCTNSA 557
           +  YG+ P +EH++CM D+LGRAG L++ E+ IE    + +  +W  +LGAC       A
Sbjct: 751 SDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKA 810

Query: 558 -TAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMPGQSWM 606
              ++ A+ L +LEP+  ++YV L N+Y A GRW+D VK R+ MK+  +KK  G SW+
Sbjct: 811 ELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865

[Close]
BLAST of CsaV3_7G004180 vs. TAIR10
Match: AT3G02010.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 363.2 bits (931), Expect = 3.1e-100
Identity = 197/550 (35.82%), Postives = 305/550 (55.45%), Query Frame = 0 

Query: 63  YASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRF--VGNSLLSLYFKLGSDSLLTRRVFD 122
           + +LL  C          Q HA  VK G +T+ F  V N LL  Y ++    L    +F+
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC-VLFE 209

Query: 123 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 182
            +  KD V++ ++ITGY ++G    +I LF  M  SG +P+ FT S V+KA   + +  L
Sbjct: 210 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 269

Query: 183 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 242
           G+  H + V  GF  +  + + ++D Y ++    + R LFDE+ E D V +  VIS++++
Sbjct: 270 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 329

Query: 243 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 302
            D YE +L FF  + +       N+ F ++L+   NL  L+ G ++H + +       + 
Sbjct: 330 ADQYEASLHFF-REMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 389

Query: 303 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMK--- 362
             +SLVDMY KC   E+++ +F  +  R +VSW+AL++ Y   G +   + LF +M+   
Sbjct: 390 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 449

Query: 363 -EVDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAY 422
              D  +F TV++A A  A++  GK++H   IR G   +V   S LVD+YAKCG I  A 
Sbjct: 450 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 509

Query: 423 RVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTG 482
           +VF+ MP RN ++WN++I   A NG    AI  F  MI+ G++PD +S +G+L ACSH G
Sbjct: 510 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 569

Query: 483 LVDQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVL 542
            V+Q   YF  M+  YGI P  +HY CM+DLLGR G   EAE L++      D  +W  +
Sbjct: 570 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 629

Query: 543 LGACTTTCTNSATAERIAKKLMELEP-QCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQ 602
           L AC     N + AER A+KL  +E  +   +YV ++N+Y A G W+    V++ M+ R 
Sbjct: 630 LNACRIH-KNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERG 689

Query: 603 LKKMPGQSWM 606
           +KK+P  SW+
Sbjct: 690 IKKVPAYSWV 696

[Close]
BLAST of CsaV3_7G004180 vs. Swiss-Prot
Match: sp|Q9LR69|PPR8_ARATH (Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E4 PE=2 SV=1)

HSP 1 Score: 728.8 bits (1880), Expect = 5.0e-209
Identity = 360/611 (58.92%), Postives = 451/611 (73.81%), Query Frame = 0 

Query: 2   MLFLKRHCSSSFTSQNFKYSTHPSI------KLSQILQFCKSGLLNDALHLLNSIDLYDS 61
           ++ LKRH      SQ+      PSI      K S+IL+ CK G L +A+ +LNS   + S
Sbjct: 3   LIILKRH-----FSQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNS--THSS 62

Query: 62  RI-NKPLLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLL 121
            I   P LYASLLQTC KV SF  G QFHAHVVKSGLETDR VGNSLLSLYFKLG     
Sbjct: 63  EIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRE 122

Query: 122 TRRVFDGLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSE 181
           TRRVFDG FVKD +SW SM++GYV   +   A+E+F +M+  G++ N FTLS+ +KACSE
Sbjct: 123 TRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSE 182

Query: 182 IGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTV 241
           +G + LG+CFHGVV+  GF+ N  I S+L  +YG N    DAR++FDE+ EPD +CWT V
Sbjct: 183 LGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAV 242

Query: 242 ISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYG 301
           +SAF++NDLYEEALG FY  HR   L PD  TFG+VLTACGNL RL+QG+EIH K+I  G
Sbjct: 243 LSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNG 302

Query: 302 FSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFR 361
              NVV ESSL+DMYGKCG+V +++++F+ MS +NSVSWSALL  YC NG++EKA+ +FR
Sbjct: 303 IGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFR 362

Query: 362 EMKEVDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINF 421
           EM+E DLY FGTV++ACAGLAAV  GKEIH QY+R+G + +VIVESAL+DLY K GCI+ 
Sbjct: 363 EMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDS 422

Query: 422 AYRVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSH 481
           A RV+ +M  RN+ITWN+M+   AQNG    A+  F  M+K+GIKPD ISFI +L AC H
Sbjct: 423 ASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGH 482

Query: 482 TGLVDQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWL 541
           TG+VD+ R+YF LM   YGIKPG EHY+CM+DLLGRAGL EEAENL+E AECRND+SLW 
Sbjct: 483 TGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWG 542

Query: 542 VLLGACTTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNR 601
           VLLG C      S  AERIAK++MELEP+ ++SYV L+N+Y+A+GR  DA+ +R+LM  R
Sbjct: 543 VLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRR 602

Query: 602 QLKKMPGQSWM 606
            + K  GQSW+
Sbjct: 603 GVAKTVGQSWI 606

[Close]
BLAST of CsaV3_7G004180 vs. Swiss-Prot
Match: sp|Q9SMZ2|PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 8.8e-105
Identity = 200/545 (36.70%), Postives = 321/545 (58.90%), Query Frame = 0 

Query: 66  LLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVK 125
           +L T +KVDS   G+Q H   +K GL+    V NSL+++Y KL       R VFD +  +
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFG-FARTVFDNMSER 380

Query: 126 DVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEI-GNLVLGKCF 185
           D++SW S+I G  + G    A+ LF  +L  G++P+ +T+++V+KA S +   L L K  
Sbjct: 381 DLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQV 440

Query: 186 HGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLY 245
           H   ++    S+  + ++LID Y RN    +A  LF E    D V W  +++ +T++   
Sbjct: 441 HVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDG 500

Query: 246 EEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESS 305
            + L  F L H+      D++T  +V   CG L  + QG+++HA  I  G+  ++   S 
Sbjct: 501 HKTLKLFALMHKQGER-SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSG 560

Query: 306 LVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEV----D 365
           ++DMY KCG +  +Q  FD +   + V+W+ +++    NG+ E+A ++F +M+ +    D
Sbjct: 561 ILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPD 620

Query: 366 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD 425
            ++  T+ +A + L A+  G++IH   ++     D  V ++LVD+YAKCG I+ AY +F 
Sbjct: 621 EFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFK 680

Query: 426 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ 485
           R+   N+  WN+M+ G AQ+G     +Q+F+ M   GIKPD ++FIG+L ACSH+GLV +
Sbjct: 681 RIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSE 740

Query: 486 ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC 545
           A  +   M G YGIKP +EHY+C+ D LGRAGL+++AENLIE+      +S++  LL AC
Sbjct: 741 AYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAAC 800

Query: 546 TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP 605
                ++ T +R+A KL+ELEP    +YV L+N+Y A  +WD+    R +MK  ++KK P
Sbjct: 801 RVQ-GDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDP 860

[Close]
BLAST of CsaV3_7G004180 vs. Swiss-Prot
Match: sp|Q9FWA6|PP207_ARATH (Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E90 PE=2 SV=2)

HSP 1 Score: 369.4 bits (947), Expect = 7.7e-101
Identity = 206/607 (33.94%), Postives = 330/607 (54.37%), Query Frame = 0 

Query: 25  SIKLSQILQFC-KSGLLNDALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGRQFH 84
           S+  S I+  C ++ LL+ AL     +   ++ +++  +YAS+L++C  +     G Q H
Sbjct: 246 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS-IYASVLRSCAALSELRLGGQLH 305

Query: 85  AHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRV-FDGLFVKDVVSWASMITGYVREGK 144
           AH +KS    D  V  + L +Y K   D++   ++ FD     +  S+ +MITGY +E  
Sbjct: 306 AHALKSDFAADGIVRTATLDMYAK--CDNMQDAQILFDNSENLNRQSYNAMITGYSQEEH 365

Query: 145 SGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSS 204
              A+ LF  ++ SG+  +  +LS V +AC+ +  L  G   +G+ ++     +  + ++
Sbjct: 366 GFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANA 425

Query: 205 LIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCP 264
            IDMYG+    ++A ++FDE+   D V W  +I+A  +N    E L F ++     R+ P
Sbjct: 426 AIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL-FLFVSMLRSRIEP 485

Query: 265 DNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLF 324
           D +TFGS+L AC   G L  G EIH+ ++  G + N     SL+DMY KCG +E+++++ 
Sbjct: 486 DEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIH 545

Query: 325 DRMSNRNS--------------------VSWSALLAVYCHNGDYEKAVNLFREMKEV--- 384
            R   R +                    VSW+++++ Y      E A  LF  M E+   
Sbjct: 546 SRFFQRANVXXXXXXXXXXXXXXXXXXXVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT 605

Query: 385 -DLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRV 444
            D +++ TV+  CA LA+   GK+IH Q I+K    DV + S LVD+Y+KCG ++ +  +
Sbjct: 606 PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLM 665

Query: 445 FDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLV 504
           F++   R+ +TWN+MI G+A +G    AIQ+FE MI E IKP+ ++FI +L AC+H GL+
Sbjct: 666 FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI 725

Query: 505 DQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLG 564
           D+   YF +M   YG+ P + HY+ MVD+LG++G ++ A  LI       D  +W  LLG
Sbjct: 726 DKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 785

Query: 565 ACTTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKK 606
            CT    N   AE     L+ L+PQ   +Y  L+NVY   G W+    +R  M+  +LKK
Sbjct: 786 VCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKK 845

[Close]
BLAST of CsaV3_7G004180 vs. Swiss-Prot
Match: sp|Q9FIB2|PP373_ARATH (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H35 PE=3 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 3.8e-100
Identity = 194/538 (36.06%), Postives = 317/538 (58.92%), Query Frame = 0 

Query: 78  RGRQFHAHVVKSGLETDRF-VGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMITG 137
           +GR+ H HV+ +GL      +GN L+++Y K GS +   RRVF  +  KD VSW SMITG
Sbjct: 331 KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIA-DARRVFYFMTDKDSVSWNSMITG 390

Query: 138 YVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSN 197
             + G    A+E +  M    I P  FTL + + +C+ +    LG+  HG  ++ G D N
Sbjct: 391 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN 450

Query: 198 PVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRND--LYEEALGFFYLK 257
             + ++L+ +Y      ++ R++F  + E D V W ++I A  R++  L E  + F   +
Sbjct: 451 VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQ 510

Query: 258 HRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGA 317
               +L  +  TF SVL+A  +L     G++IH   +    +    TE++L+  YGKCG 
Sbjct: 511 RAGQKL--NRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGE 570

Query: 318 VEKSQRLFDRMS-NRNSVSWSALLAVYCHNGDYEKAVNLFREM----KEVDLYSFGTVIR 377
           ++  +++F RM+  R++V+W+++++ Y HN    KA++L   M    + +D + + TV+ 
Sbjct: 571 MDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLS 630

Query: 378 ACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLIT 437
           A A +A +  G E+H   +R     DV+V SALVD+Y+KCG +++A R F+ MP RN  +
Sbjct: 631 AFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS 690

Query: 438 WNSMIHGFAQNGSSGIAIQIFEAMIKEG-IKPDCISFIGLLFACSHTGLVDQARHYFDLM 497
           WNSMI G+A++G    A+++FE M  +G   PD ++F+G+L ACSH GL+++   +F+ M
Sbjct: 691 WNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESM 750

Query: 498 TGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGACTTTCTNSA 557
           +  YG+ P +EH++CM D+LGRAG L++ E+ IE    + +  +W  +LGAC       A
Sbjct: 751 SDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKA 810

Query: 558 -TAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMPGQSWM 606
              ++ A+ L +LEP+  ++YV L N+Y A GRW+D VK R+ MK+  +KK  G SW+
Sbjct: 811 ELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865

[Close]
BLAST of CsaV3_7G004180 vs. Swiss-Prot
Match: sp|Q9S7F4|PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H36 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 5.5e-99
Identity = 197/550 (35.82%), Postives = 305/550 (55.45%), Query Frame = 0 

Query: 63  YASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRF--VGNSLLSLYFKLGSDSLLTRRVFD 122
           + +LL  C          Q HA  VK G +T+ F  V N LL  Y ++    L    +F+
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC-VLFE 209

Query: 123 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 182
            +  KD V++ ++ITGY ++G    +I LF  M  SG +P+ FT S V+KA   + +  L
Sbjct: 210 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 269

Query: 183 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 242
           G+  H + V  GF  +  + + ++D Y ++    + R LFDE+ E D V +  VIS++++
Sbjct: 270 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 329

Query: 243 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 302
            D YE +L FF  + +       N+ F ++L+   NL  L+ G ++H + +       + 
Sbjct: 330 ADQYEASLHFF-REMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 389

Query: 303 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMK--- 362
             +SLVDMY KC   E+++ +F  +  R +VSW+AL++ Y   G +   + LF +M+   
Sbjct: 390 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 449

Query: 363 -EVDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAY 422
              D  +F TV++A A  A++  GK++H   IR G   +V   S LVD+YAKCG I  A 
Sbjct: 450 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 509

Query: 423 RVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTG 482
           +VF+ MP RN ++WN++I   A NG    AI  F  MI+ G++PD +S +G+L ACSH G
Sbjct: 510 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 569

Query: 483 LVDQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVL 542
            V+Q   YF  M+  YGI P  +HY CM+DLLGR G   EAE L++      D  +W  +
Sbjct: 570 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 629

Query: 543 LGACTTTCTNSATAERIAKKLMELEP-QCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQ 602
           L AC     N + AER A+KL  +E  +   +YV ++N+Y A G W+    V++ M+ R 
Sbjct: 630 LNACRIH-KNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERG 689

Query: 603 LKKMPGQSWM 606
           +KK+P  SW+
Sbjct: 690 IKKVPAYSWV 696

[Close]
BLAST of CsaV3_7G004180 vs. TrEMBL
Match: tr|A0A0A0K5P0|A0A0A0K5P0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047230 PE=4 SV=1)

HSP 1 Score: 1245.3 bits (3221), Expect = 0.0e+00
Identity = 605/605 (100.00%), Postives = 605/605 (100.00%), Query Frame = 0 

Query: 1   MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60
           MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP
Sbjct: 1   MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60

Query: 61  LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120
           LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD
Sbjct: 61  LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120

Query: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180
           GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL
Sbjct: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180

Query: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240
           GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR
Sbjct: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240

Query: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300
           NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV
Sbjct: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300

Query: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360
           TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD
Sbjct: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360

Query: 361 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD 420
           LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD
Sbjct: 361 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD 420

Query: 421 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480
           RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ
Sbjct: 421 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480

Query: 481 ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC 540
           ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC
Sbjct: 481 ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC 540

Query: 541 TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP 600
           TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP
Sbjct: 541 TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP 600

Query: 601 GQSWM 606
           GQSWM
Sbjct: 601 GQSWM 605

[Close]
BLAST of CsaV3_7G004180 vs. TrEMBL
Match: tr|A0A1S3C0U7|A0A1S3C0U7_CUCME (pentatricopeptide repeat-containing protein At1g03540 OS=Cucumis melo OX=3656 GN=LOC103495534 PE=4 SV=1)

HSP 1 Score: 1101.3 bits (2847), Expect = 0.0e+00
Identity = 535/605 (88.43%), Postives = 558/605 (92.23%), Query Frame = 0 

Query: 1   MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60
           MMLF KRHC+SSFTSQNFKYSTH S KL QILQFCKSGLLNDALH+LNS+DLYDSRINKP
Sbjct: 1   MMLFFKRHCTSSFTSQNFKYSTHLSNKLFQILQFCKSGLLNDALHILNSVDLYDSRINKP 60

Query: 61  LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120
           LLYASLLQTC KVDSF+ G QFHAHVVKSGLETDRFVGNSLLSLYFKLGS+ LLTRRVFD
Sbjct: 61  LLYASLLQTCTKVDSFSSGCQFHAHVVKSGLETDRFVGNSLLSLYFKLGSNCLLTRRVFD 120

Query: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180
           GLFVKDVVSWASMITGYVREGKSG+AIELFWDMLDSGIEPN FTLS VIKACSEIGNLVL
Sbjct: 121 GLFVKDVVSWASMITGYVREGKSGMAIELFWDMLDSGIEPNDFTLSTVIKACSEIGNLVL 180

Query: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240
           GKCFHGVVVRRGFDSNPVILSSLIDMYGRN +SS+ARQLFDELLEPDPVCWTTVISAFTR
Sbjct: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNYLSSEARQLFDELLEPDPVCWTTVISAFTR 240

Query: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300
           ND YEEALGFFYL HRA+RL PDNYTFGSVLTACGNLGRL+QGEEIHAKVIAYGF GNVV
Sbjct: 241 NDFYEEALGFFYLMHRAYRLSPDNYTFGSVLTACGNLGRLKQGEEIHAKVIAYGFGGNVV 300

Query: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360
            ESSLVDMYGKCGAVEKSQR+FDRMSNRNSVSWSALLAVYC NGD+EK V+LFREMK+VD
Sbjct: 301 VESSLVDMYGKCGAVEKSQRVFDRMSNRNSVSWSALLAVYCQNGDFEKVVSLFREMKKVD 360

Query: 361 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD 420
           LYSFGTV+RACAGLAAV PGKE+HCQYIRKGGWRDVIVESALVDLYAKCG I+FAYR+F+
Sbjct: 361 LYSFGTVLRACAGLAAVAPGKEVHCQYIRKGGWRDVIVESALVDLYAKCGSIDFAYRIFE 420

Query: 421 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480
           RMPTRNLIT                      AMIKEGIKPDCISFIGLLFACSHTGLVDQ
Sbjct: 421 RMPTRNLITXXXXXXXXXXXXXXXXXXXXXXAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480

Query: 481 ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC 540
           ARHYFDLMTG+YGIKPG+EHYNCMVDLLGRAGLLEEAENLIENA+CRNDS+LWLVLLGA 
Sbjct: 481 ARHYFDLMTGEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADCRNDSALWLVLLGAS 540

Query: 541 TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP 600
           T T TNSA AERIAKKLMELEPQCYLSYVHLAN YRAVGRWDDAVKVRELMKNRQLKKMP
Sbjct: 541 TATWTNSAIAERIAKKLMELEPQCYLSYVHLANFYRAVGRWDDAVKVRELMKNRQLKKMP 600

Query: 601 GQSWM 606
           GQSWM
Sbjct: 601 GQSWM 605

[Close]
BLAST of CsaV3_7G004180 vs. TrEMBL
Match: tr|A0A2N9EWB8|A0A2N9EWB8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6833 PE=4 SV=1)

HSP 1 Score: 901.7 bits (2329), Expect = 8.7e-259
Identity = 438/605 (72.40%), Postives = 498/605 (82.31%), Query Frame = 0 

Query: 1   MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60
           +  F KRHC  SF +   + +  PS K SQIL FCK G L DAL LLNS +  D  + KP
Sbjct: 3   LFFFFKRHC--SFLTLTLQNTKTPSTKQSQILYFCKLGALPDALRLLNSANSADI-VVKP 62

Query: 61  LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120
           ++YASLLQTC KV SF  G Q HAHVVKSGLETDRFVGNSLLSLYFKLG D   TRRVFD
Sbjct: 63  IVYASLLQTCTKVVSFNHGLQIHAHVVKSGLETDRFVGNSLLSLYFKLGRDFSETRRVFD 122

Query: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180
           GLFVKDV+SW SM++GYVR GK   ++ELFW+ML  G+EPNGFTLSAVIKACSE+G L L
Sbjct: 123 GLFVKDVISWTSMVSGYVRAGKPRNSLELFWEMLAFGVEPNGFTLSAVIKACSELGELRL 182

Query: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240
           G+CFHGVV+R GFDSN VI S+LIDMYGRN  S DARQLFDEL EPD +CWT+VISAFTR
Sbjct: 183 GRCFHGVVMRHGFDSNHVISSALIDMYGRNYESRDARQLFDELPEPDTICWTSVISAFTR 242

Query: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300
           NDL+EEALGFFY   R   L PD +TFG+VLTACGNLGRL+ G E+HAKV+  G  GNV 
Sbjct: 243 NDLFEEALGFFYTMQRNRGLSPDEFTFGTVLTACGNLGRLKLGREVHAKVMTSGLCGNVF 302

Query: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360
            ESSLVDMYGKCG+V++S+R+FDRM  RNSVSWSALL VYC NGD+E  + +FREM E D
Sbjct: 303 VESSLVDMYGKCGSVDESRRVFDRMPRRNSVSWSALLGVYCQNGDFESVIKIFREMAETD 362

Query: 361 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD 420
           LY FGTV+RACAGLAAV  GKE+HCQY+++GGWRDVIVESALV LYAKCGCI+FAYR+F 
Sbjct: 363 LYCFGTVLRACAGLAAVRQGKEVHCQYVKRGGWRDVIVESALVCLYAKCGCISFAYRIFM 422

Query: 421 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480
           +M  RNLITWNSMI GFAQNG    A++IF+ MIKEGIKPD ISFIG+LFACSHTGLVDQ
Sbjct: 423 QMSVRNLITWNSMICGFAQNGKGEEALRIFDEMIKEGIKPDYISFIGVLFACSHTGLVDQ 482

Query: 481 ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC 540
            R YF  MT  YGIK G+EHYNCMVDLLGRAGLLEEAENLIENA+C+N+SSLW VLLGAC
Sbjct: 483 GRKYFISMTEDYGIKAGIEHYNCMVDLLGRAGLLEEAENLIENADCKNESSLWAVLLGAC 542

Query: 541 TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP 600
            TTCTNS TAERIAKK+MELEP  +LSYV LANVYRAVGRWDDA ++R +M+NR +KKMP
Sbjct: 543 -TTCTNSITAERIAKKMMELEPDYHLSYVLLANVYRAVGRWDDASEIRRVMENRGVKKMP 602

Query: 601 GQSWM 606
           G+SW+
Sbjct: 603 GRSWI 603

[Close]
BLAST of CsaV3_7G004180 vs. TrEMBL
Match: tr|A0A2C9UTE5|A0A2C9UTE5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G150300 PE=4 SV=1)

HSP 1 Score: 900.2 bits (2325), Expect = 2.5e-258
Identity = 435/607 (71.66%), Postives = 503/607 (82.87%), Query Frame = 0 

Query: 1   MMLF--LKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRIN 60
           M LF  +KRHCSS       K +     K  +ILQ+CKSG L DALHLLNS+D + +  N
Sbjct: 1   MKLFFSIKRHCSSC----TIKTTQIAQTKEFRILQYCKSGALFDALHLLNSLD-FKNLSN 60

Query: 61  KPLLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRV 120
           KP  YASLLQTC KV SF  G Q HAH+VKSGLETDRFVGNSLL+LYFKLG +   TRRV
Sbjct: 61  KPFFYASLLQTCTKVVSFNHGLQIHAHLVKSGLETDRFVGNSLLALYFKLGRNFFETRRV 120

Query: 121 FDGLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNL 180
           FDGL+ +DV+SW SMITGY+R  K   A++LFW+MLD G+EPN FTLSA+IKACS++G+L
Sbjct: 121 FDGLYFRDVISWTSMITGYIRLEKPKNALKLFWEMLDFGVEPNAFTLSAMIKACSDLGDL 180

Query: 181 VLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAF 240
            LGKCFHGVV+ RGFDSN VI S+LIDMYGRN    DAR LFDELLEPD +CWT+VISAF
Sbjct: 181 KLGKCFHGVVMIRGFDSNHVIASALIDMYGRNYGQDDARTLFDELLEPDAICWTSVISAF 240

Query: 241 TRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGN 300
           TRND+YE+ALGFFYL  R   L PD +TFG+VLTACGNLGRL+QG+E+HAKVI  GFSGN
Sbjct: 241 TRNDMYEKALGFFYLMQRKIGLTPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGFSGN 300

Query: 301 VVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKE 360
           VV ESSLVDMYGKCG V +SQR+FDRMS +NSVSWSALL  YC N D+E  + +FREM+E
Sbjct: 301 VVVESSLVDMYGKCGLVNESQRVFDRMSIKNSVSWSALLGGYCQNEDFESVIRIFREMEE 360

Query: 361 VDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRV 420
           VDLYSFGT++RACAGLAA+  GKE+HCQY+RKGGWRDVIVESALVDLYAKCGCI+FA R+
Sbjct: 361 VDLYSFGTILRACAGLAAIKQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIHFARRI 420

Query: 421 FDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLV 480
           F +MP RNLI+WNSMI GFAQNG  G A+QIF+ MIKEGIKPD I+FIGLLFACSH GLV
Sbjct: 421 FTKMPVRNLISWNSMIGGFAQNGRGGEALQIFDEMIKEGIKPDYITFIGLLFACSHAGLV 480

Query: 481 DQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLG 540
           D+ + YF  MT +YGIKPG+EHYNCMVDLL RAGLLEEAENLIENA+CR+DSSLW VLLG
Sbjct: 481 DEGKKYFMSMTKEYGIKPGIEHYNCMVDLLARAGLLEEAENLIENADCRDDSSLWAVLLG 540

Query: 541 ACTTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKK 600
           AC  TCT+S + ERIAKK M+LEP  +LSYV+LAN+YRAVGRWDDAVK+R LMK R +KK
Sbjct: 541 AC-ATCTDSVSGERIAKKTMQLEPGYHLSYVYLANIYRAVGRWDDAVKIRRLMKIRGVKK 600

Query: 601 MPGQSWM 606
           MPG+SW+
Sbjct: 601 MPGRSWI 601

[Close]
BLAST of CsaV3_7G004180 vs. TrEMBL
Match: tr|A0A2I4DNK8|A0A2I4DNK8_9ROSI (pentatricopeptide repeat-containing protein At1g03540 OS=Juglans regia OX=51240 GN=LOC108981936 PE=4 SV=1)

HSP 1 Score: 884.4 bits (2284), Expect = 1.4e-253
Identity = 432/605 (71.40%), Postives = 499/605 (82.48%), Query Frame = 0 

Query: 1   MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60
           +  F KRHC SS T  N K +   SIK SQIL  CK G L DAL LLNS +  D  + KP
Sbjct: 3   LSFFFKRHC-SSLTPLNPKNTKTTSIKESQILYLCKLGALPDALRLLNSTNYGDISV-KP 62

Query: 61  LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120
           +LYASLLQTC KV SF  G Q HAHVVKSGLETDRFVGNSLL+LYFKLG D   TRRVFD
Sbjct: 63  VLYASLLQTCTKVLSFNHGLQIHAHVVKSGLETDRFVGNSLLALYFKLGRDFSETRRVFD 122

Query: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180
           GLFVKDV+SW S+I+GYVR GK G ++E FW ML  G+EPNGFT+SA IKACSE+G L L
Sbjct: 123 GLFVKDVISWTSIISGYVRAGKPGDSLEFFWKMLLFGVEPNGFTISATIKACSELGYLRL 182

Query: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240
           G+CFHG+VVR GFDSN VI S+LIDMYGRN  S DA +LFD+L EPD +CWT++ISA+TR
Sbjct: 183 GRCFHGMVVRCGFDSNYVISSALIDMYGRNYESGDAHRLFDQLPEPDAICWTSLISAYTR 242

Query: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300
           NDL+ EA+GFFY  HR H L PD +T G+VLTACGNLGRL+QG+E+HAKVI  G  GNVV
Sbjct: 243 NDLFVEAMGFFYAMHRNHGLSPDEFTCGTVLTACGNLGRLKQGKELHAKVITSGLCGNVV 302

Query: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360
            ESSLVDMYGKCG+V++S+ +FDRM  RNSVSWSALL VYC N D+E  + LFREM+EVD
Sbjct: 303 VESSLVDMYGKCGSVDESRLVFDRMPKRNSVSWSALLGVYCQNSDFESVIKLFREMEEVD 362

Query: 361 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD 420
           LY FGTV+RACAGLAAV  GKE+HCQY+++GGWRDVIVESALV LYAKCGCI+FA+R+F 
Sbjct: 363 LYCFGTVLRACAGLAAVRLGKEVHCQYMKRGGWRDVIVESALVGLYAKCGCISFAFRIFM 422

Query: 421 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480
           +MP +NLITWNSMI GFAQNG    A++IF  MIK+GIKPD ISFIG+LFACSHTGLVDQ
Sbjct: 423 QMPVKNLITWNSMICGFAQNGKGEEALRIFYEMIKDGIKPDYISFIGVLFACSHTGLVDQ 482

Query: 481 ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC 540
            R YF LMT +YGIK G+EHYNCMVDLLGRAGLLEEAENLIENAE +NDSSLW VLLGAC
Sbjct: 483 GRKYFILMTEEYGIKAGIEHYNCMVDLLGRAGLLEEAENLIENAEFKNDSSLWAVLLGAC 542

Query: 541 TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP 600
            TTCTNS TAERIAKK++ELEP  +LSYV LANVYRA+GRW+DA+++R LM+NR +KKM 
Sbjct: 543 -TTCTNSITAERIAKKMIELEPGYHLSYVLLANVYRAIGRWNDALEIRRLMENRGVKKMV 602

Query: 601 GQSWM 606
           G+SW+
Sbjct: 603 GRSWI 604

The following BLAST results are available for this feature:
BLAST of CsaV3_7G004180 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004137012.10.0e+00100.00PREDICTED: pentatricopeptide repeat-containing protein At1g03540 [Cucumis sativu... [more]
XP_008455346.10.0e+0088.43PREDICTED: pentatricopeptide repeat-containing protein At1g03540 [Cucumis melo][more]
XP_022147827.12.1e-30182.64pentatricopeptide repeat-containing protein At1g03540 [Momordica charantia][more]
XP_023529479.12.5e-29481.65pentatricopeptide repeat-containing protein At1g03540 [Cucurbita pepo subsp. pep... [more]
XP_022988714.17.4e-29481.32pentatricopeptide repeat-containing protein At1g03540 [Cucurbita maxima][more]
BLAST of CsaV3_7G004180 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G03540.12.8e-21058.92Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT4G33170.14.9e-10636.70Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G02330.14.3e-10233.94Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G09950.12.1e-10136.06Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G02010.13.1e-10035.82Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CsaV3_7G004180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LR69|PPR8_ARATH5.0e-20958.92Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana OX... [more]
sp|Q9SMZ2|PP347_ARATH8.8e-10536.70Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... [more]
sp|Q9FWA6|PP207_ARATH7.7e-10133.94Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidop... [more]
sp|Q9FIB2|PP373_ARATH3.8e-10036.06Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis th... [more]
sp|Q9S7F4|PP206_ARATH5.5e-9935.82Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis th... [more]
BLAST of CsaV3_7G004180 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K5P0|A0A0A0K5P0_CUCSA0.0e+00100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047230 PE=4 SV=1[more]
tr|A0A1S3C0U7|A0A1S3C0U7_CUCME0.0e+0088.43pentatricopeptide repeat-containing protein At1g03540 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A2N9EWB8|A0A2N9EWB8_FAGSY8.7e-25972.40Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6833 PE=4 SV=1[more]
tr|A0A2C9UTE5|A0A2C9UTE5_MANES2.5e-25871.66Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G150300 PE=4 SV=... [more]
tr|A0A2I4DNK8|A0A2I4DNK8_9ROSI1.4e-25371.40pentatricopeptide repeat-containing protein At1g03540 OS=Juglans regia OX=51240 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR019734TPR_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G004180.1CsaV3_7G004180.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatPFAMPF13176TPR_7coord: 567..590
e-value: 0.01
score: 15.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 199..224
e-value: 0.26
score: 11.5
coord: 500..522
e-value: 0.0044
score: 17.1
coord: 229..251
e-value: 0.0013
score: 18.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 331..360
e-value: 2.3E-7
score: 28.6
coord: 428..462
e-value: 3.1E-8
score: 31.3
coord: 128..161
e-value: 5.5E-5
score: 21.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 329..372
e-value: 1.7E-9
score: 37.6
coord: 426..472
e-value: 1.1E-9
score: 38.2
coord: 125..172
e-value: 1.6E-12
score: 47.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 126..160
score: 12.101
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 395..425
score: 7.541
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 227..262
score: 8.353
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 161..195
score: 6.412
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 263..297
score: 8.133
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 59..93
score: 6.369
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 196..226
score: 7.333
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 298..328
score: 8.714
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 461..496
score: 6.818
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 426..460
score: 12.66
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 329..363
score: 11.564
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 564..598
score: 7.015
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 497..531
score: 7.618
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 277..376
e-value: 8.5E-21
score: 76.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 377..488
e-value: 5.1E-24
score: 87.3
coord: 489..604
e-value: 5.3E-10
score: 41.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 184..276
e-value: 2.0E-14
score: 55.7
coord: 29..183
e-value: 1.7E-22
score: 82.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 331..364
coord: 485..585
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 22..605
NoneNo IPR availablePANTHERPTHR24015:SF328SUBFAMILY NOT NAMEDcoord: 22..605

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G004180CSPI07G04370Wild cucumber (PI 183967)cpicucB415
CsaV3_7G004180Cucsa.147910Cucumber (Gy14) v1cgycucB226
CsaV3_7G004180CmaCh11G018600Cucurbita maxima (Rimu)cmacucB0172
CsaV3_7G004180Cp4.1LG04g03350Cucurbita pepo (Zucchini)cpecucB0863
CsaV3_7G004180CsGy7G003990Cucumber (Gy14) v2cgybcucB348
CsaV3_7G004180Carg19103Silver-seed gourdcarcucB0758
CsaV3_7G004180Cla007731Watermelon (97103) v1cucwmB626
CsaV3_7G004180MELO3C018759Melon (DHL92) v3.5.1cucmeB548
CsaV3_7G004180ClCG02G001260Watermelon (Charleston Gray)cucwcgB571
CsaV3_7G004180Lsi11G015230Bottle gourd (USVL1VR-Ls)cuclsiB529
CsaV3_7G004180MELO3C018759.2Melon (DHL92) v3.6.1cucmedB536
CsaV3_7G004180Cla97C02G027690Watermelon (97103) v2cucwmbB549
CsaV3_7G004180Bhi05G001582Wax gourdcucwgoB687
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G004180Cucumber (Chinese Long) v3cuccucB057
CsaV3_7G004180Cucumber (Chinese Long) v3cuccucB213
CsaV3_7G004180Silver-seed gourdcarcucB0034
CsaV3_7G004180Silver-seed gourdcarcucB0176
CsaV3_7G004180Silver-seed gourdcarcucB0675
CsaV3_7G004180Silver-seed gourdcarcucB0915
CsaV3_7G004180Silver-seed gourdcarcucB0993
CsaV3_7G004180Cucumber (Gy14) v1cgycucB029
CsaV3_7G004180Cucumber (Gy14) v1cgycucB177
CsaV3_7G004180Cucurbita maxima (Rimu)cmacucB0269
CsaV3_7G004180Cucurbita maxima (Rimu)cmacucB0511
CsaV3_7G004180Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G004180Cucurbita maxima (Rimu)cmacucB0768
CsaV3_7G004180Cucurbita maxima (Rimu)cmacucB0813
CsaV3_7G004180Cucurbita maxima (Rimu)cmacucB1040
CsaV3_7G004180Cucurbita moschata (Rifu)cmocucB0155
CsaV3_7G004180Cucurbita moschata (Rifu)cmocucB0259
CsaV3_7G004180Cucurbita moschata (Rifu)cmocucB0498
CsaV3_7G004180Cucurbita moschata (Rifu)cmocucB0622
CsaV3_7G004180Cucurbita moschata (Rifu)cmocucB0672
CsaV3_7G004180Cucurbita moschata (Rifu)cmocucB0754
CsaV3_7G004180Cucurbita moschata (Rifu)cmocucB0797
CsaV3_7G004180Cucurbita pepo (Zucchini)cpecucB0322
CsaV3_7G004180Cucurbita pepo (Zucchini)cpecucB0367
CsaV3_7G004180Cucurbita pepo (Zucchini)cpecucB0656
CsaV3_7G004180Cucurbita pepo (Zucchini)cpecucB0946
CsaV3_7G004180Wild cucumber (PI 183967)cpicucB061
CsaV3_7G004180Wild cucumber (PI 183967)cpicucB373
CsaV3_7G004180Bottle gourd (USVL1VR-Ls)cuclsiB522
CsaV3_7G004180Melon (DHL92) v3.5.1cucmeB588
CsaV3_7G004180Melon (DHL92) v3.6.1cucmedB576
CsaV3_7G004180Watermelon (Charleston Gray)cucwcgB580
CsaV3_7G004180Watermelon (Charleston Gray)cucwcgB561
CsaV3_7G004180Watermelon (Charleston Gray)cucwcgB564
CsaV3_7G004180Watermelon (97103) v1cucwmB609
CsaV3_7G004180Watermelon (97103) v1cucwmB623
CsaV3_7G004180Watermelon (97103) v1cucwmB627
CsaV3_7G004180Watermelon (97103) v2cucwmbB534
CsaV3_7G004180Watermelon (97103) v2cucwmbB542
CsaV3_7G004180Watermelon (97103) v2cucwmbB559
CsaV3_7G004180Wax gourdcucwgoB707
CsaV3_7G004180Wax gourdcucwgoB711