BLAST of Carg19103 vs. NCBI nr
Match:
XP_022930613.1 (pentatricopeptide repeat-containing protein At1g03540 [Cucurbita moschata])
HSP 1 Score: 1225.3 bits (3169), Expect = 0.0e+00
Identity = 599/603 (99.34%), Postives = 602/603 (99.83%), Query Frame = 0
Query: 1 MRLIIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKSI 60
MRLIIKRHCRSFTSQNLKNSTHPPTK+SQILQFCGSGLL+DA+HTLNSLDSFDSTTNKSI
Sbjct: 1 MRLIIKRHCRSFTSQNLKNSTHPPTKQSQILQFCGSGLLYDALHTLNSLDSFDSTTNKSI 60
Query: 61 LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 120
LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG
Sbjct: 61 LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 120
Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG
Sbjct: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN
Sbjct: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVI HGLGGNVVV
Sbjct: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIVHGLGGNVVV 300
Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL
Sbjct: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
Query: 361 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 420
YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ
Sbjct: 361 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 420
Query: 421 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 480
MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG
Sbjct: 421 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 480
Query: 481 RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT 540
RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT
Sbjct: 481 RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT 540
Query: 541 TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQ 600
TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQ
Sbjct: 541 TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQ 600
Query: 601 SWM 604
SWM
Sbjct: 601 SWM 603
BLAST of Carg19103 vs. NCBI nr
Match:
XP_023529479.1 (pentatricopeptide repeat-containing protein At1g03540 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1223.0 bits (3163), Expect = 0.0e+00
Identity = 598/603 (99.17%), Postives = 600/603 (99.50%), Query Frame = 0
Query: 1 MRLIIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKSI 60
MRL IKRHCRSFTSQNLKNSTHPPTKESQILQFCGS LLHDA+HTLNSLDSFDSTTNKSI
Sbjct: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 60
Query: 61 LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 120
LYASLLQTCTKVASF+HGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSD RLTRRVFDG
Sbjct: 61 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG
Sbjct: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN
Sbjct: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV
Sbjct: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL
Sbjct: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
Query: 361 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 420
YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ
Sbjct: 361 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 420
Query: 421 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 480
MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG
Sbjct: 421 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 480
Query: 481 RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT 540
RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT
Sbjct: 481 RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT 540
Query: 541 TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQ 600
TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQ
Sbjct: 541 TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQ 600
Query: 601 SWM 604
SWM
Sbjct: 601 SWM 603
BLAST of Carg19103 vs. NCBI nr
Match:
XP_022988714.1 (pentatricopeptide repeat-containing protein At1g03540 [Cucurbita maxima])
HSP 1 Score: 1211.8 bits (3134), Expect = 0.0e+00
Identity = 590/603 (97.84%), Postives = 597/603 (99.00%), Query Frame = 0
Query: 1 MRLIIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKSI 60
MRL IKRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDA+HTLNSLDSF+STTNKSI
Sbjct: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDALHTLNSLDSFNSTTNKSI 60
Query: 61 LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 120
LYASLLQTCTKVASFSHGRQIHAHVLKSGLE DRFVGNSLLSLYFKLGSD RLTRRVFDG
Sbjct: 61 LYASLLQTCTKVASFSHGRQIHAHVLKSGLETDRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
LFVKDVVSWTSMITSYVREGKPGNAIE FWDMLDLGIEPNGFTLSAVIKACSEIGNL+LG
Sbjct: 121 LFVKDVVSWTSMITSYVREGKPGNAIEFFWDMLDLGIEPNGFTLSAVIKACSEIGNLILG 180
Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN
Sbjct: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV
Sbjct: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
ESSLVDMYGKCGA+EKSQ VFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL
Sbjct: 301 ESSLVDMYGKCGAIEKSQLVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
Query: 361 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 420
YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFE+
Sbjct: 361 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFER 420
Query: 421 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 480
MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG
Sbjct: 421 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 480
Query: 481 RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT 540
RHYFV MTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFR+DSSLWQVLLGACT
Sbjct: 481 RHYFVLMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRSDSSLWQVLLGACT 540
Query: 541 TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQ 600
TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALT+RKLMKSRQVKKVPGQ
Sbjct: 541 TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTVRKLMKSRQVKKVPGQ 600
Query: 601 SWM 604
SWM
Sbjct: 601 SWM 603
BLAST of Carg19103 vs. NCBI nr
Match:
XP_022147827.1 (pentatricopeptide repeat-containing protein At1g03540 [Momordica charantia])
HSP 1 Score: 1109.7 bits (2869), Expect = 0.0e+00
Identity = 536/603 (88.89%), Postives = 565/603 (93.70%), Query Frame = 0
Query: 1 MRLIIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKSI 60
MRL KRHC SFT NLKN T+ TK SQ+LQ C SGLLHDA+H LNS+D FD+ TNK I
Sbjct: 1 MRLFFKRHCSSFTFHNLKNFTYASTKGSQVLQHCRSGLLHDALHILNSVDLFDTATNKPI 60
Query: 61 LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 120
LYASLLQTC KVASFSHGRQIHAHV+KSGLE DRFVGNSLLSLYFKLGSD LTRRVFDG
Sbjct: 61 LYASLLQTCIKVASFSHGRQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDYLLTRRVFDG 120
Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
LFVKDVVSWTSMIT YVREGKPGNAIELFWDMLDLGIEPNGFT+SAVIKACSEIGNLVLG
Sbjct: 121 LFVKDVVSWTSMITGYVREGKPGNAIELFWDMLDLGIEPNGFTISAVIKACSEIGNLVLG 180
Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
RCFHGLV+RHGF+SNHVIVSSLIDMYGRN AS+DARQLFDE+ EPDAICWTSVISA TRN
Sbjct: 181 RCFHGLVLRHGFDSNHVIVSSLIDMYGRNCASNDARQLFDELLEPDAICWTSVISAFTRN 240
Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
DLYE+ALGFFY M RTY LSPDGFTFG+VLTAC NLGRLRQGEEVHAKVIAHGLGGNVVV
Sbjct: 241 DLYEEALGFFYSMQRTYRLSPDGFTFGTVLTACGNLGRLRQGEEVHAKVIAHGLGGNVVV 300
Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
ESSLVDMYGKCGAV+KSQ VFDRMS+RNSVSWSALLGVYCQNGDFE VIN+FR ME++DL
Sbjct: 301 ESSLVDMYGKCGAVDKSQLVFDRMSRRNSVSWSALLGVYCQNGDFEMVINLFREMEEVDL 360
Query: 361 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 420
YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ
Sbjct: 361 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 420
Query: 421 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 480
MP++NLITWNSMIRGFAQNG+ GI+++IFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG
Sbjct: 421 MPSKNLITWNSMIRGFAQNGQGGIALQIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 480
Query: 481 RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT 540
RHYF MTE+YGIKPGIEHYNCMVDLLGR GLLEEAENLIENAD RNDSSLWQVLLGACT
Sbjct: 481 RHYFALMTEQYGIKPGIEHYNCMVDLLGRTGLLEEAENLIENADCRNDSSLWQVLLGACT 540
Query: 541 TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQ 600
T TNS TAERIAKKMMELEP+HHLSYVLLANVYRAVGRWDDAL IRKLMK+RQVKK+PGQ
Sbjct: 541 TCTNSATAERIAKKMMELEPRHHLSYVLLANVYRAVGRWDDALKIRKLMKNRQVKKMPGQ 600
Query: 601 SWM 604
SW+
Sbjct: 601 SWI 603
BLAST of Carg19103 vs. NCBI nr
Match:
XP_004137012.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g03540 [Cucumis sativus] >KGN43587.1 hypothetical protein Csa_7G047230 [Cucumis sativus])
HSP 1 Score: 1015.0 bits (2623), Expect = 1.1e-292
Identity = 492/605 (81.32%), Postives = 540/605 (89.26%), Query Frame = 0
Query: 1 MRLIIKRHC-RSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKS 60
M L +KRHC SFTSQN K STHP K SQILQFC SGLL+DA+H LNS+D +DS NK
Sbjct: 1 MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60
Query: 61 ILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFD 120
+LYASLLQTC KV SF+ GRQ HAHV+KSGLE DRFVGNSLLSLYFKLGSD LTRRVFD
Sbjct: 61 LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120
Query: 121 GLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVL 180
GLFVKDVVSW SMIT YVREGK G AIELFWDMLD GIEPNGFTLSAVIKACSEIGNLVL
Sbjct: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180
Query: 181 GRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTR 240
G+CFHG+VVR GF+SN VI+SSLIDMYGRN SSDARQLFDE+ EPD +CWT+VISA TR
Sbjct: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240
Query: 241 NDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVV 300
NDLYE+ALGFFYL R + L PD +TFGSVLTAC NLGRLRQGEE+HAKVIA+G GNVV
Sbjct: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300
Query: 301 VESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKID 360
ESSLVDMYGKCGAVEKSQR+FDRMS RNSVSWSALL VYC NGD+EK +N+FR M+++D
Sbjct: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360
Query: 361 LYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFE 420
LYSFGTVIRACAGLAAVT GKE+HCQY+RKGGWRDVIVESALVDLYAKCGCI+FAYR+F+
Sbjct: 361 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD 420
Query: 421 QMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQ 480
+MPTRNLITWNSMI GFAQNG SGI+I+IFE MIKEGIKPD ISFIG+LFACSHTGLVDQ
Sbjct: 421 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480
Query: 481 GRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGAC 540
RHYF MT +YGIKPG+EHYNCMVDLLGRAGLLEEAENLIENA+ RNDSSLW VLLGAC
Sbjct: 481 ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC 540
Query: 541 TTS-TNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVP 600
TT+ TNS TAERIAKK+MELEPQ +LSYV LANVYRAVGRWDDA+ +R+LMK+RQ+KK+P
Sbjct: 541 TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP 600
Query: 601 GQSWM 604
GQSWM
Sbjct: 601 GQSWM 605
BLAST of Carg19103 vs. TAIR10
Match:
AT1G03540.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)
HSP 1 Score: 762.7 bits (1968), Expect = 1.7e-220
Identity = 371/604 (61.42%), Postives = 463/604 (76.66%), Query Frame = 0
Query: 3 LIIKRHCRSFTSQNL--KNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKSI 62
+I+KRH S L S+ PTK+S+IL+ C G L +A+ LNS S +
Sbjct: 4 IILKRHFSQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPK- 63
Query: 63 LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 122
LYASLLQTC KV SF HG Q HAHV+KSGLE DR VGNSLLSLYFKLG +R TRRVFDG
Sbjct: 64 LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 123
Query: 123 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 182
FVKD +SWTSM++ YV + A+E+F +M+ G++ N FTLS+ +KACSE+G + LG
Sbjct: 124 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 183
Query: 183 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 242
RCFHG+V+ HGF NH I S+L +YG N DAR++FDEMPEPD ICWT+V+SA ++N
Sbjct: 184 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 243
Query: 243 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 302
DLYE+ALG FY M R L PDG TFG+VLTAC NL RL+QG+E+H K+I +G+G NVVV
Sbjct: 244 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 303
Query: 303 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 362
ESSL+DMYGKCG+V ++++VF+ MSK+NSVSWSALLG YCQNG+ EK I IFR ME+ DL
Sbjct: 304 ESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL 363
Query: 363 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 422
Y FGTV++ACAGLAAV GKE+H QYVR+G + +VIVESAL+DLY K GCID A R++ +
Sbjct: 364 YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSK 423
Query: 423 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 482
M RN+ITWN+M+ AQNGR ++ F +M+K+GIKPDYISFI +L AC HTG+VD+G
Sbjct: 424 MSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEG 483
Query: 483 RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT 542
R+YFV M + YGIKPG EHY+CM+DLLGRAGL EEAENL+E A+ RND+SLW VLLG C
Sbjct: 484 RNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCA 543
Query: 543 TSTN-SGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPG 602
+ + S AERIAK+MMELEP++H+SYVLL+N+Y+A+GR DAL IRKLM R V K G
Sbjct: 544 ANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVG 603
Query: 603 QSWM 604
QSW+
Sbjct: 604 QSWI 606
BLAST of Carg19103 vs. TAIR10
Match:
AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 383.3 bits (983), Expect = 2.8e-106
Identity = 199/549 (36.25%), Postives = 322/549 (58.65%), Query Frame = 0
Query: 60 ILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFD 119
+ + +L T KV S + G+Q+H LK GL+ V NSL+++Y KL R VFD
Sbjct: 316 VTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKL-RKFGFARTVFD 375
Query: 120 GLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEI-GNLV 179
+ +D++SW S+I + G A+ LF +L G++P+ +T+++V+KA S + L
Sbjct: 376 NMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLS 435
Query: 180 LGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALT 239
L + H ++ S+ + ++LID Y RN +A LF E D + W ++++ T
Sbjct: 436 LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYT 495
Query: 240 RNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNV 299
++ L F LM + S D FT +V C L + QG++VHA I G ++
Sbjct: 496 QSHDGHKTLKLFALMHKQGERS-DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 555
Query: 300 VVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKI 359
V S ++DMY KCG + +Q FD + + V+W+ ++ +NG+ E+ ++F M +
Sbjct: 556 WVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLM 615
Query: 360 ----DLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFA 419
D ++ T+ +A + L A+ QG+++H ++ D V ++LVD+YAKCG ID A
Sbjct: 616 GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDA 675
Query: 420 YRIFEQMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHT 479
Y +F+++ N+ WN+M+ G AQ+G ++++F++M GIKPD ++FIGVL ACSH+
Sbjct: 676 YCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHS 735
Query: 480 GLVDQGRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQV 539
GLV + + M +YGIKP IEHY+C+ D LGRAGL+++AENLIE+ +S+++
Sbjct: 736 GLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRT 795
Query: 540 LLGACTTSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQV 599
LL AC ++ T +R+A K++ELEP +YVLL+N+Y A +WD+ R +MK +V
Sbjct: 796 LLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKV 855
Query: 600 KKVPGQSWM 604
KK PG SW+
Sbjct: 856 KKDPGFSWI 861
BLAST of Carg19103 vs. TAIR10
Match:
AT3G49170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 380.6 bits (976), Expect = 1.8e-105
Identity = 196/551 (35.57%), Postives = 324/551 (58.80%), Query Frame = 0
Query: 62 YASLLQTCTKVASFSHGRQIHAHVLKSG-LEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 121
Y ++++ C+ GR ++K+G E+D VG SL+ ++ K + +VFD
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 122 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 181
+ +VV+WT MIT ++ G P AI F DM+ G E + FTLS+V AC+E+ NL LG
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 182 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFAS---SDARQLFDEMPEPDAICWTSVISAL 241
+ H +R G + + SL+DMY + A D R++FD M + + WT++I+
Sbjct: 289 KQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 348
Query: 242 TRN-DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGG 301
+N +L +A+ F M+ + P+ FTF S AC NL R G++V + GL
Sbjct: 349 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 408
Query: 302 NVVVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGME 361
N V +S++ M+ K +E +QR F+ +S++N VS++ L C+N +FE+ + +
Sbjct: 409 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 468
Query: 362 KIDL----YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCID 421
+ +L ++F +++ A + ++ +G+++H Q V+ G + V +AL+ +Y+KCG ID
Sbjct: 469 ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSID 528
Query: 422 FAYRIFEQMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACS 481
A R+F M RN+I+W SMI GFA++G + +E F +MI+EG+KP+ ++++ +L ACS
Sbjct: 529 TASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 588
Query: 482 HTGLVDQGRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLW 541
H GLV +G +F M E++ IKP +EHY CMVDLL RAGLL +A I F+ D +W
Sbjct: 589 HVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVW 648
Query: 542 QVLLGACTTSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSR 601
+ LGAC +N+ + A+K++EL+P +Y+ L+N+Y G+W+++ +R+ MK R
Sbjct: 649 RTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKER 708
Query: 602 QVKKVPGQSWM 604
+ K G SW+
Sbjct: 709 NLVKEGGCSWI 717
BLAST of Carg19103 vs. TAIR10
Match:
AT3G02330.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 379.0 bits (972), Expect = 5.4e-105
Identity = 202/593 (34.06%), Postives = 335/593 (56.49%), Query Frame = 0
Query: 36 SGLLHDAVHTLNSLDSFDSTTNKSILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRF 95
+ LL A+ + ++ ++SI YAS+L++C ++ G Q+HAH LKS AD
Sbjct: 259 NNLLSLALKFFKEMQKVNAGVSQSI-YASVLRSCAALSELRLGGQLHAHALKSDFAADGI 318
Query: 96 VGNSLLSLYFKLGSDVRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDL 155
V + L +Y K +++ + +FD + S+ +MIT Y +E A+ LF ++
Sbjct: 319 VRTATLDMYAKC-DNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS 378
Query: 156 GIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDA 215
G+ + +LS V +AC+ + L G +GL ++ + + + ++ IDMYG+ A ++A
Sbjct: 379 GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEA 438
Query: 216 RQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACAN 275
++FDEM DA+ W ++I+A +N + L F MLR+ + PD FTFGS+L AC
Sbjct: 439 FRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS-RIEPDEFTFGSILKACTG 498
Query: 276 LGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSKRNS------ 335
G L G E+H+ ++ G+ N V SL+DMY KCG +E+++++ R +R +
Sbjct: 499 -GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVXXXXX 558
Query: 336 --------------VSWSALLGVYCQNGDFEKVINIFRGMEKI----DLYSFGTVIRACA 395
VSW++++ Y E +F M ++ D +++ TV+ CA
Sbjct: 559 XXXXXXXXXXXXXXVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCA 618
Query: 396 GLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQMPTRNLITWNS 455
LA+ GK++H Q ++K DV + S LVD+Y+KCG + + +FE+ R+ +TWN+
Sbjct: 619 NLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNA 678
Query: 456 MIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQGRHYFVRMTEEY 515
MI G+A +G+ +I++FE MI E IKP++++FI +L AC+H GL+D+G YF M +Y
Sbjct: 679 MICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDY 738
Query: 516 GIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACTTSTNS-GTAER 575
G+ P + HY+ MVD+LG++G ++ A LI F D +W+ LLG CT N+ AE
Sbjct: 739 GLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEE 798
Query: 576 IAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQSWM 604
++ L+PQ +Y LL+NVY G W+ +R+ M+ ++KK PG SW+
Sbjct: 799 ATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 847
BLAST of Carg19103 vs. TAIR10
Match:
AT3G02010.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 377.5 bits (968), Expect = 1.6e-104
Identity = 201/560 (35.89%), Postives = 312/560 (55.71%), Query Frame = 0
Query: 51 SFDSTTNKSILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRF--VGNSLLSLYFKLG 110
S T + + +LL C + Q+HA +K G + + F V N LL Y ++
Sbjct: 139 SSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV- 198
Query: 111 SDVRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVI 170
+ L +F+ + KD V++ ++IT Y ++G +I LF M G +P+ FT S V+
Sbjct: 199 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 258
Query: 171 KACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAI 230
KA + + LG+ H L V GF+ + + + ++D Y ++ + R LFDEMPE D +
Sbjct: 259 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV 318
Query: 231 CWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAK 290
+ VIS+ ++ D YE +L FF M + F F ++L+ ANL L+ G ++H +
Sbjct: 319 SYNVVISSYSQADQYEASLHFFREM-QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 378
Query: 291 VIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKV 350
+ + V +SLVDMY KC E+++ +F + +R +VSW+AL+ Y Q G
Sbjct: 379 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 438
Query: 351 INIFRGME----KIDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDL 410
+ +F M + D +F TV++A A A++ GK++H +R G +V S LVD+
Sbjct: 439 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 498
Query: 411 YAKCGCIDFAYRIFEQMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISF 470
YAKCG I A ++FE+MP RN ++WN++I A NG +I F +MI+ G++PD +S
Sbjct: 499 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 558
Query: 471 IGVLFACSHTGLVDQGRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENAD 530
+GVL ACSH G V+QG YF M+ YGI P +HY CM+DLLGR G EAE L++
Sbjct: 559 LGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP 618
Query: 531 FRNDSSLWQVLLGACTTSTNSGTAERIAKKMMELEP-QHHLSYVLLANVYRAVGRWDDAL 590
F D +W +L AC N AER A+K+ +E + +YV ++N+Y A G W+
Sbjct: 619 FEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVR 678
Query: 591 TIRKLMKSRQVKKVPGQSWM 604
++K M+ R +KKVP SW+
Sbjct: 679 DVKKAMRERGIKKVPAYSWV 696
BLAST of Carg19103 vs. Swiss-Prot
Match:
sp|Q9LR69|PPR8_ARATH (Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E4 PE=2 SV=1)
HSP 1 Score: 762.7 bits (1968), Expect = 3.1e-219
Identity = 371/604 (61.42%), Postives = 463/604 (76.66%), Query Frame = 0
Query: 3 LIIKRHCRSFTSQNL--KNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKSI 62
+I+KRH S L S+ PTK+S+IL+ C G L +A+ LNS S +
Sbjct: 4 IILKRHFSQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPK- 63
Query: 63 LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 122
LYASLLQTC KV SF HG Q HAHV+KSGLE DR VGNSLLSLYFKLG +R TRRVFDG
Sbjct: 64 LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 123
Query: 123 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 182
FVKD +SWTSM++ YV + A+E+F +M+ G++ N FTLS+ +KACSE+G + LG
Sbjct: 124 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 183
Query: 183 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 242
RCFHG+V+ HGF NH I S+L +YG N DAR++FDEMPEPD ICWT+V+SA ++N
Sbjct: 184 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 243
Query: 243 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 302
DLYE+ALG FY M R L PDG TFG+VLTAC NL RL+QG+E+H K+I +G+G NVVV
Sbjct: 244 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 303
Query: 303 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 362
ESSL+DMYGKCG+V ++++VF+ MSK+NSVSWSALLG YCQNG+ EK I IFR ME+ DL
Sbjct: 304 ESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL 363
Query: 363 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 422
Y FGTV++ACAGLAAV GKE+H QYVR+G + +VIVESAL+DLY K GCID A R++ +
Sbjct: 364 YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSK 423
Query: 423 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 482
M RN+ITWN+M+ AQNGR ++ F +M+K+GIKPDYISFI +L AC HTG+VD+G
Sbjct: 424 MSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEG 483
Query: 483 RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT 542
R+YFV M + YGIKPG EHY+CM+DLLGRAGL EEAENL+E A+ RND+SLW VLLG C
Sbjct: 484 RNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCA 543
Query: 543 TSTN-SGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPG 602
+ + S AERIAK+MMELEP++H+SYVLL+N+Y+A+GR DAL IRKLM R V K G
Sbjct: 544 ANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVG 603
Query: 603 QSWM 604
QSW+
Sbjct: 604 QSWI 606
BLAST of Carg19103 vs. Swiss-Prot
Match:
sp|Q9SMZ2|PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)
HSP 1 Score: 383.3 bits (983), Expect = 5.1e-105
Identity = 199/549 (36.25%), Postives = 322/549 (58.65%), Query Frame = 0
Query: 60 ILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFD 119
+ + +L T KV S + G+Q+H LK GL+ V NSL+++Y KL R VFD
Sbjct: 316 VTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKL-RKFGFARTVFD 375
Query: 120 GLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEI-GNLV 179
+ +D++SW S+I + G A+ LF +L G++P+ +T+++V+KA S + L
Sbjct: 376 NMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLS 435
Query: 180 LGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALT 239
L + H ++ S+ + ++LID Y RN +A LF E D + W ++++ T
Sbjct: 436 LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYT 495
Query: 240 RNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNV 299
++ L F LM + S D FT +V C L + QG++VHA I G ++
Sbjct: 496 QSHDGHKTLKLFALMHKQGERS-DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 555
Query: 300 VVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKI 359
V S ++DMY KCG + +Q FD + + V+W+ ++ +NG+ E+ ++F M +
Sbjct: 556 WVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLM 615
Query: 360 ----DLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFA 419
D ++ T+ +A + L A+ QG+++H ++ D V ++LVD+YAKCG ID A
Sbjct: 616 GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDA 675
Query: 420 YRIFEQMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHT 479
Y +F+++ N+ WN+M+ G AQ+G ++++F++M GIKPD ++FIGVL ACSH+
Sbjct: 676 YCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHS 735
Query: 480 GLVDQGRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQV 539
GLV + + M +YGIKP IEHY+C+ D LGRAGL+++AENLIE+ +S+++
Sbjct: 736 GLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRT 795
Query: 540 LLGACTTSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQV 599
LL AC ++ T +R+A K++ELEP +YVLL+N+Y A +WD+ R +MK +V
Sbjct: 796 LLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKV 855
Query: 600 KKVPGQSWM 604
KK PG SW+
Sbjct: 856 KKDPGFSWI 861
BLAST of Carg19103 vs. Swiss-Prot
Match:
sp|Q5G1T1|PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2261 PE=2 SV=1)
HSP 1 Score: 380.6 bits (976), Expect = 3.3e-104
Identity = 196/551 (35.57%), Postives = 324/551 (58.80%), Query Frame = 0
Query: 62 YASLLQTCTKVASFSHGRQIHAHVLKSG-LEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 121
Y ++++ C+ GR ++K+G E+D VG SL+ ++ K + +VFD
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 122 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 181
+ +VV+WT MIT ++ G P AI F DM+ G E + FTLS+V AC+E+ NL LG
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 182 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFAS---SDARQLFDEMPEPDAICWTSVISAL 241
+ H +R G + + SL+DMY + A D R++FD M + + WT++I+
Sbjct: 289 KQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 348
Query: 242 TRN-DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGG 301
+N +L +A+ F M+ + P+ FTF S AC NL R G++V + GL
Sbjct: 349 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 408
Query: 302 NVVVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGME 361
N V +S++ M+ K +E +QR F+ +S++N VS++ L C+N +FE+ + +
Sbjct: 409 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 468
Query: 362 KIDL----YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCID 421
+ +L ++F +++ A + ++ +G+++H Q V+ G + V +AL+ +Y+KCG ID
Sbjct: 469 ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSID 528
Query: 422 FAYRIFEQMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACS 481
A R+F M RN+I+W SMI GFA++G + +E F +MI+EG+KP+ ++++ +L ACS
Sbjct: 529 TASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 588
Query: 482 HTGLVDQGRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLW 541
H GLV +G +F M E++ IKP +EHY CMVDLL RAGLL +A I F+ D +W
Sbjct: 589 HVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVW 648
Query: 542 QVLLGACTTSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSR 601
+ LGAC +N+ + A+K++EL+P +Y+ L+N+Y G+W+++ +R+ MK R
Sbjct: 649 RTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKER 708
Query: 602 QVKKVPGQSWM 604
+ K G SW+
Sbjct: 709 NLVKEGGCSWI 717
BLAST of Carg19103 vs. Swiss-Prot
Match:
sp|Q9FWA6|PP207_ARATH (Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E90 PE=2 SV=2)
HSP 1 Score: 379.0 bits (972), Expect = 9.7e-104
Identity = 202/593 (34.06%), Postives = 335/593 (56.49%), Query Frame = 0
Query: 36 SGLLHDAVHTLNSLDSFDSTTNKSILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRF 95
+ LL A+ + ++ ++SI YAS+L++C ++ G Q+HAH LKS AD
Sbjct: 259 NNLLSLALKFFKEMQKVNAGVSQSI-YASVLRSCAALSELRLGGQLHAHALKSDFAADGI 318
Query: 96 VGNSLLSLYFKLGSDVRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDL 155
V + L +Y K +++ + +FD + S+ +MIT Y +E A+ LF ++
Sbjct: 319 VRTATLDMYAKC-DNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS 378
Query: 156 GIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDA 215
G+ + +LS V +AC+ + L G +GL ++ + + + ++ IDMYG+ A ++A
Sbjct: 379 GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEA 438
Query: 216 RQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACAN 275
++FDEM DA+ W ++I+A +N + L F MLR+ + PD FTFGS+L AC
Sbjct: 439 FRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS-RIEPDEFTFGSILKACTG 498
Query: 276 LGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSKRNS------ 335
G L G E+H+ ++ G+ N V SL+DMY KCG +E+++++ R +R +
Sbjct: 499 -GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVXXXXX 558
Query: 336 --------------VSWSALLGVYCQNGDFEKVINIFRGMEKI----DLYSFGTVIRACA 395
VSW++++ Y E +F M ++ D +++ TV+ CA
Sbjct: 559 XXXXXXXXXXXXXXVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCA 618
Query: 396 GLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQMPTRNLITWNS 455
LA+ GK++H Q ++K DV + S LVD+Y+KCG + + +FE+ R+ +TWN+
Sbjct: 619 NLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNA 678
Query: 456 MIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQGRHYFVRMTEEY 515
MI G+A +G+ +I++FE MI E IKP++++FI +L AC+H GL+D+G YF M +Y
Sbjct: 679 MICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDY 738
Query: 516 GIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACTTSTNS-GTAER 575
G+ P + HY+ MVD+LG++G ++ A LI F D +W+ LLG CT N+ AE
Sbjct: 739 GLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEE 798
Query: 576 IAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQSWM 604
++ L+PQ +Y LL+NVY G W+ +R+ M+ ++KK PG SW+
Sbjct: 799 ATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 847
BLAST of Carg19103 vs. Swiss-Prot
Match:
sp|Q9S7F4|PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H36 PE=3 SV=1)
HSP 1 Score: 377.5 bits (968), Expect = 2.8e-103
Identity = 201/560 (35.89%), Postives = 312/560 (55.71%), Query Frame = 0
Query: 51 SFDSTTNKSILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRF--VGNSLLSLYFKLG 110
S T + + +LL C + Q+HA +K G + + F V N LL Y ++
Sbjct: 139 SSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV- 198
Query: 111 SDVRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVI 170
+ L +F+ + KD V++ ++IT Y ++G +I LF M G +P+ FT S V+
Sbjct: 199 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 258
Query: 171 KACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAI 230
KA + + LG+ H L V GF+ + + + ++D Y ++ + R LFDEMPE D +
Sbjct: 259 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV 318
Query: 231 CWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAK 290
+ VIS+ ++ D YE +L FF M + F F ++L+ ANL L+ G ++H +
Sbjct: 319 SYNVVISSYSQADQYEASLHFFREM-QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 378
Query: 291 VIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKV 350
+ + V +SLVDMY KC E+++ +F + +R +VSW+AL+ Y Q G
Sbjct: 379 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 438
Query: 351 INIFRGME----KIDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDL 410
+ +F M + D +F TV++A A A++ GK++H +R G +V S LVD+
Sbjct: 439 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 498
Query: 411 YAKCGCIDFAYRIFEQMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISF 470
YAKCG I A ++FE+MP RN ++WN++I A NG +I F +MI+ G++PD +S
Sbjct: 499 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 558
Query: 471 IGVLFACSHTGLVDQGRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENAD 530
+GVL ACSH G V+QG YF M+ YGI P +HY CM+DLLGR G EAE L++
Sbjct: 559 LGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP 618
Query: 531 FRNDSSLWQVLLGACTTSTNSGTAERIAKKMMELEP-QHHLSYVLLANVYRAVGRWDDAL 590
F D +W +L AC N AER A+K+ +E + +YV ++N+Y A G W+
Sbjct: 619 FEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVR 678
Query: 591 TIRKLMKSRQVKKVPGQSWM 604
++K M+ R +KKVP SW+
Sbjct: 679 DVKKAMRERGIKKVPAYSWV 696
BLAST of Carg19103 vs. TrEMBL
Match:
tr|A0A0A0K5P0|A0A0A0K5P0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047230 PE=4 SV=1)
HSP 1 Score: 1015.0 bits (2623), Expect = 7.0e-293
Identity = 492/605 (81.32%), Postives = 540/605 (89.26%), Query Frame = 0
Query: 1 MRLIIKRHC-RSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKS 60
M L +KRHC SFTSQN K STHP K SQILQFC SGLL+DA+H LNS+D +DS NK
Sbjct: 1 MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60
Query: 61 ILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFD 120
+LYASLLQTC KV SF+ GRQ HAHV+KSGLE DRFVGNSLLSLYFKLGSD LTRRVFD
Sbjct: 61 LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120
Query: 121 GLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVL 180
GLFVKDVVSW SMIT YVREGK G AIELFWDMLD GIEPNGFTLSAVIKACSEIGNLVL
Sbjct: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180
Query: 181 GRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTR 240
G+CFHG+VVR GF+SN VI+SSLIDMYGRN SSDARQLFDE+ EPD +CWT+VISA TR
Sbjct: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240
Query: 241 NDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVV 300
NDLYE+ALGFFYL R + L PD +TFGSVLTAC NLGRLRQGEE+HAKVIA+G GNVV
Sbjct: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300
Query: 301 VESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKID 360
ESSLVDMYGKCGAVEKSQR+FDRMS RNSVSWSALL VYC NGD+EK +N+FR M+++D
Sbjct: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360
Query: 361 LYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFE 420
LYSFGTVIRACAGLAAVT GKE+HCQY+RKGGWRDVIVESALVDLYAKCGCI+FAYR+F+
Sbjct: 361 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD 420
Query: 421 QMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQ 480
+MPTRNLITWNSMI GFAQNG SGI+I+IFE MIKEGIKPD ISFIG+LFACSHTGLVDQ
Sbjct: 421 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480
Query: 481 GRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGAC 540
RHYF MT +YGIKPG+EHYNCMVDLLGRAGLLEEAENLIENA+ RNDSSLW VLLGAC
Sbjct: 481 ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC 540
Query: 541 TTS-TNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVP 600
TT+ TNS TAERIAKK+MELEPQ +LSYV LANVYRAVGRWDDA+ +R+LMK+RQ+KK+P
Sbjct: 541 TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP 600
Query: 601 GQSWM 604
GQSWM
Sbjct: 601 GQSWM 605
BLAST of Carg19103 vs. TrEMBL
Match:
tr|A0A1S3C0U7|A0A1S3C0U7_CUCME (pentatricopeptide repeat-containing protein At1g03540 OS=Cucumis melo OX=3656 GN=LOC103495534 PE=4 SV=1)
HSP 1 Score: 959.1 bits (2478), Expect = 4.6e-276
Identity = 476/605 (78.68%), Postives = 515/605 (85.12%), Query Frame = 0
Query: 1 MRLIIKRHC-RSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKS 60
M L KRHC SFTSQN K STH K QILQFC SGLL+DA+H LNS+D +DS NK
Sbjct: 1 MMLFFKRHCTSSFTSQNFKYSTHLSNKLFQILQFCKSGLLNDALHILNSVDLYDSRINKP 60
Query: 61 ILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFD 120
+LYASLLQTCTKV SFS G Q HAHV+KSGLE DRFVGNSLLSLYFKLGS+ LTRRVFD
Sbjct: 61 LLYASLLQTCTKVDSFSSGCQFHAHVVKSGLETDRFVGNSLLSLYFKLGSNCLLTRRVFD 120
Query: 121 GLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVL 180
GLFVKDVVSW SMIT YVREGK G AIELFWDMLD GIEPN FTLS VIKACSEIGNLVL
Sbjct: 121 GLFVKDVVSWASMITGYVREGKSGMAIELFWDMLDSGIEPNDFTLSTVIKACSEIGNLVL 180
Query: 181 GRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTR 240
G+CFHG+VVR GF+SN VI+SSLIDMYGRN+ SS+ARQLFDE+ EPD +CWT+VISA TR
Sbjct: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNYLSSEARQLFDELLEPDPVCWTTVISAFTR 240
Query: 241 NDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVV 300
ND YE+ALGFFYLM R Y LSPD +TFGSVLTAC NLGRL+QGEE+HAKVIA+G GGNVV
Sbjct: 241 NDFYEEALGFFYLMHRAYRLSPDNYTFGSVLTACGNLGRLKQGEEIHAKVIAYGFGGNVV 300
Query: 301 VESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKID 360
VESSLVDMYGKCGAVEKSQRVFDRMS RNSVSWSALL VYCQNGDFEKV+++FR M+K+D
Sbjct: 301 VESSLVDMYGKCGAVEKSQRVFDRMSNRNSVSWSALLAVYCQNGDFEKVVSLFREMKKVD 360
Query: 361 LYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFE 420
LYSFGTV+RACAGLAAV GKEVHCQY+RKGGWRDVIVESALVDLYAKCG IDFAYRIFE
Sbjct: 361 LYSFGTVLRACAGLAAVAPGKEVHCQYIRKGGWRDVIVESALVDLYAKCGSIDFAYRIFE 420
Query: 421 QMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQ 480
+MPTRNLIT MIKEGIKPD ISFIG+LFACSHTGLVDQ
Sbjct: 421 RMPTRNLITXXXXXXXXXXXXXXXXXXXXXXAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480
Query: 481 GRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGAC 540
RHYF MT EYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENAD RNDS+LW VLLGA
Sbjct: 481 ARHYFDLMTGEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADCRNDSALWLVLLGAS 540
Query: 541 T-TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVP 600
T T TNS AERIAKK+MELEPQ +LSYV LAN YRAVGRWDDA+ +R+LMK+RQ+KK+P
Sbjct: 541 TATWTNSAIAERIAKKLMELEPQCYLSYVHLANFYRAVGRWDDAVKVRELMKNRQLKKMP 600
Query: 601 GQSWM 604
GQSWM
Sbjct: 601 GQSWM 605
BLAST of Carg19103 vs. TrEMBL
Match:
tr|A0A2N9EWB8|A0A2N9EWB8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6833 PE=4 SV=1)
HSP 1 Score: 953.4 bits (2463), Expect = 2.5e-274
Identity = 463/598 (77.42%), Postives = 516/598 (86.29%), Query Frame = 0
Query: 6 KRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKSILYASL 65
KRHC SF + L+N+ P TK+SQIL FC G L DA+ LNS +S D K I+YASL
Sbjct: 8 KRHC-SFLTLTLQNTKTPSTKQSQILYFCKLGALPDALRLLNSANSADIVV-KPIVYASL 67
Query: 66 LQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDGLFVKD 125
LQTCTKV SF+HG QIHAHV+KSGLE DRFVGNSLLSLYFKLG D TRRVFDGLFVKD
Sbjct: 68 LQTCTKVVSFNHGLQIHAHVVKSGLETDRFVGNSLLSLYFKLGRDFSETRRVFDGLFVKD 127
Query: 126 VVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHG 185
V+SWTSM++ YVR GKP N++ELFW+ML G+EPNGFTLSAVIKACSE+G L LGRCFHG
Sbjct: 128 VISWTSMVSGYVRAGKPRNSLELFWEMLAFGVEPNGFTLSAVIKACSELGELRLGRCFHG 187
Query: 186 LVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRNDLYED 245
+V+RHGF+SNHVI S+LIDMYGRN+ S DARQLFDE+PEPD ICWTSVISA TRNDL+E+
Sbjct: 188 VVMRHGFDSNHVISSALIDMYGRNYESRDARQLFDELPEPDTICWTSVISAFTRNDLFEE 247
Query: 246 ALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVESSLV 305
ALGFFY M R LSPD FTFG+VLTAC NLGRL+ G EVHAKV+ GL GNV VESSLV
Sbjct: 248 ALGFFYTMQRNRGLSPDEFTFGTVLTACGNLGRLKLGREVHAKVMTSGLCGNVFVESSLV 307
Query: 306 DMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDLYSFGT 365
DMYGKCG+V++S+RVFDRM +RNSVSWSALLGVYCQNGDFE VI IFR M + DLY FGT
Sbjct: 308 DMYGKCGSVDESRRVFDRMPRRNSVSWSALLGVYCQNGDFESVIKIFREMAETDLYCFGT 367
Query: 366 VIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQMPTRN 425
V+RACAGLAAV QGKEVHCQYV++GGWRDVIVESALV LYAKCGCI FAYRIF QM RN
Sbjct: 368 VLRACAGLAAVRQGKEVHCQYVKRGGWRDVIVESALVCLYAKCGCISFAYRIFMQMSVRN 427
Query: 426 LITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQGRHYFV 485
LITWNSMI GFAQNG+ ++ IF+EMIKEGIKPDYISFIGVLFACSHTGLVDQGR YF+
Sbjct: 428 LITWNSMICGFAQNGKGEEALRIFDEMIKEGIKPDYISFIGVLFACSHTGLVDQGRKYFI 487
Query: 486 RMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACTTSTNS 545
MTE+YGIK GIEHYNCMVDLLGRAGLLEEAENLIENAD +N+SSLW VLLGACTT TNS
Sbjct: 488 SMTEDYGIKAGIEHYNCMVDLLGRAGLLEEAENLIENADCKNESSLWAVLLGACTTCTNS 547
Query: 546 GTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQSWM 604
TAERIAKKMMELEP +HLSYVLLANVYRAVGRWDDA IR++M++R VKK+PG+SW+
Sbjct: 548 ITAERIAKKMMELEPDYHLSYVLLANVYRAVGRWDDASEIRRVMENRGVKKMPGRSWI 603
BLAST of Carg19103 vs. TrEMBL
Match:
tr|A0A1R3J2H0|A0A1R3J2H0_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_08075 PE=4 SV=1)
HSP 1 Score: 935.3 bits (2416), Expect = 7.1e-269
Identity = 449/601 (74.71%), Postives = 517/601 (86.02%), Query Frame = 0
Query: 6 KRHCRSFTSQNLKNSTH-PPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTN--KSILY 65
KRHC SF S N +N+ P K SQIL FC S L A+H LN+L+ TT+ K +LY
Sbjct: 8 KRHCCSFASLNPQNNIEIPLDKHSQILHFCRSAQLLPAIHLLNTLNIPTETTSSKKPLLY 67
Query: 66 ASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDGLF 125
ASLLQTCTKV SF+HG + HAHV+KSGL+ DRFVGNSLL+LYFKLG D R TRRVFDGLF
Sbjct: 68 ASLLQTCTKVQSFAHGLRFHAHVIKSGLDTDRFVGNSLLALYFKLGHDFRETRRVFDGLF 127
Query: 126 VKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRC 185
VKDV+SWTSM++ Y+R GKP +++E+FW+MLD G+EPNGFTLS+VIKACSE+G L LG C
Sbjct: 128 VKDVISWTSMVSGYIRAGKPESSLEMFWEMLDFGVEPNGFTLSSVIKACSELGKLRLGWC 187
Query: 186 FHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRNDL 245
FHG+VV+ GF+SN VI S+LID YGRN ++A QLF+E+PEPDAICWTS+ISALTRNDL
Sbjct: 188 FHGVVVKRGFDSNLVISSALIDFYGRNLQLNEACQLFEELPEPDAICWTSIISALTRNDL 247
Query: 246 YEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVES 305
Y +AL FFY M R Y LSPDG+TFG++LTACANLGRLRQG+++HAKVI GL GNVVVES
Sbjct: 248 YGEALNFFYSMHRNYGLSPDGYTFGTILTACANLGRLRQGKQLHAKVITTGLCGNVVVES 307
Query: 306 SLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDLYS 365
SL+DMYGKCG V +S+R+FDRMSK+NSVSWSALLGVYCQN D+E VI IFRGM+++DLY
Sbjct: 308 SLLDMYGKCGLVNESRRIFDRMSKKNSVSWSALLGVYCQNKDYESVIRIFRGMDEVDLYC 367
Query: 366 FGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQMP 425
FGT+IRACAGLAAV QGKEVHCQYVRKGGW++VIVESALVDLYAKCGCIDFA+RIF QM
Sbjct: 368 FGTIIRACAGLAAVRQGKEVHCQYVRKGGWKNVIVESALVDLYAKCGCIDFAHRIFIQMS 427
Query: 426 TRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQGRH 485
RNLITWNSMI GFAQNGR +++IF+EMI EGIKPDYISFIGVLFACSHTGLVDQGR
Sbjct: 428 IRNLITWNSMIYGFAQNGRGVEALKIFDEMINEGIKPDYISFIGVLFACSHTGLVDQGRK 487
Query: 486 YFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACTTS 545
YF M +EYGIKPGIEHYNCMVDLLGRAGLLEEAENLIE+ADFRNDSSLW VLLGACTT
Sbjct: 488 YFTSMIKEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIESADFRNDSSLWAVLLGACTTC 547
Query: 546 TNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQSW 604
T+S TAERIA+KM+EL P +H+SYVLLANVYRAVGRW DAL +RKLMK R VKK+ G+SW
Sbjct: 548 TSSSTAERIARKMIELAPDYHMSYVLLANVYRAVGRWSDALKVRKLMKDRGVKKITGKSW 607
BLAST of Carg19103 vs. TrEMBL
Match:
tr|A0A1R3JV86|A0A1R3JV86_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_13705 PE=4 SV=1)
HSP 1 Score: 932.2 bits (2408), Expect = 6.0e-268
Identity = 449/601 (74.71%), Postives = 516/601 (85.86%), Query Frame = 0
Query: 6 KRHCRSFTSQNLKNS-THPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTN--KSILY 65
KRHC SF S N +N +P K SQIL FC S L A+H L++LD TT+ K +LY
Sbjct: 8 KRHCCSFASLNPQNHIENPLDKHSQILHFCRSAQLLPAIHLLSTLDIPTETTSSKKPLLY 67
Query: 66 ASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDGLF 125
ASLLQTCTKV SF+HG + HAHV+KSGLE DRFVGNSLL+LYFKLG D R TRRVFDGLF
Sbjct: 68 ASLLQTCTKVQSFAHGLRFHAHVIKSGLETDRFVGNSLLALYFKLGHDFRETRRVFDGLF 127
Query: 126 VKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRC 185
VKDV+SWTSM++ Y+R GKP +++E+FW+MLD G+EPNGFTLS+VIKACSE+G L LG C
Sbjct: 128 VKDVISWTSMVSGYIRAGKPESSLEMFWEMLDFGVEPNGFTLSSVIKACSELGKLRLGWC 187
Query: 186 FHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRNDL 245
FHG+VV+ GF+SN VI S+LID YGRN ++A QLF+E+PEPDAICWTS+ISALTRNDL
Sbjct: 188 FHGVVVKRGFDSNLVISSALIDFYGRNLQLNEACQLFEELPEPDAICWTSIISALTRNDL 247
Query: 246 YEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVES 305
Y +AL FFY M R Y LSPDG+TFG++LTACANLGRLRQG+++HA+VI GL GNVVVES
Sbjct: 248 YGEALNFFYSMHRNYGLSPDGYTFGTILTACANLGRLRQGKQLHARVITTGLCGNVVVES 307
Query: 306 SLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDLYS 365
SL+DMYGKCG V +S+RVFDRMSK+NSVSW ALLGVYCQN D+E VI IFRGM+++DLY
Sbjct: 308 SLLDMYGKCGLVIESRRVFDRMSKKNSVSWCALLGVYCQNKDYESVIRIFRGMDEVDLYC 367
Query: 366 FGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQMP 425
FGT+IRACAGLAAV QGKEVHCQYVRKGGW++VIVESALVDLYAKCGCIDFA+RIF QM
Sbjct: 368 FGTIIRACAGLAAVRQGKEVHCQYVRKGGWKNVIVESALVDLYAKCGCIDFAHRIFIQMS 427
Query: 426 TRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQGRH 485
RNLITWNSMI GFAQNGR +++IF+EMI EGIKPDYISFIGVLFACSHTGLVDQGR
Sbjct: 428 IRNLITWNSMIYGFAQNGRGVEALKIFDEMINEGIKPDYISFIGVLFACSHTGLVDQGRK 487
Query: 486 YFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACTTS 545
YF M +EYGIKPGIEHYNCMVDLLGRAGLLEEAENLIE+ADFRNDSSLW VLLGACTT
Sbjct: 488 YFTSMIKEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIESADFRNDSSLWAVLLGACTTC 547
Query: 546 TNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQSW 604
T+S TAERIA+KM+EL P +H+SYVLLANVYRAVGRW DAL +RKLMK R VKK+ G+SW
Sbjct: 548 TSSSTAERIARKMIELAPDYHMSYVLLANVYRAVGRWSDALKVRKLMKDRGVKKITGKSW 607
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022930613.1 | 0.0e+00 | 99.34 | pentatricopeptide repeat-containing protein At1g03540 [Cucurbita moschata] | [more] |
XP_023529479.1 | 0.0e+00 | 99.17 | pentatricopeptide repeat-containing protein At1g03540 [Cucurbita pepo subsp. pep... | [more] |
XP_022988714.1 | 0.0e+00 | 97.84 | pentatricopeptide repeat-containing protein At1g03540 [Cucurbita maxima] | [more] |
XP_022147827.1 | 0.0e+00 | 88.89 | pentatricopeptide repeat-containing protein At1g03540 [Momordica charantia] | [more] |
XP_004137012.1 | 1.1e-292 | 81.32 | PREDICTED: pentatricopeptide repeat-containing protein At1g03540 [Cucumis sativu... | [more] |
Match Name | E-value | Identity | Description | |
AT1G03540.1 | 1.7e-220 | 61.42 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT4G33170.1 | 2.8e-106 | 36.25 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G49170.1 | 1.8e-105 | 35.57 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G02330.1 | 5.4e-105 | 34.06 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G02010.1 | 1.6e-104 | 35.89 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |