Carg19103 (gene) Silver-seed gourd

NameCarg19103
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat-containing protein
LocationCucurbita_argyrosperma_scaffold_112 : 198893 .. 200704 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACTCATCATCAAACGCCATTGCCGTAGTTTCACCTCTCAAAATCTAAAGAATTCGACACACCCACCAACAAAAGAGTCTCAAATTCTCCAATTTTGCGGCTCAGGCCTACTCCACGATGCTGTACACACCCTAAACTCCCTCGATTCCTTCGATTCCACCACCAACAAATCCATTCTCTACGCTTCTCTCCTGCAAACCTGCACCAAGGTTGCTTCCTTCAGCCATGGCCGTCAAATTCATGCCCATGTTCTTAAATCTGGCCTTGAAGCTGACCGGTTTGTTGGGAATAGCTTACTTTCTCTTTACTTTAAATTGGGTTCTGATGTCCGGCTGACTCGAAGAGTATTCGATGGTCTTTTTGTGAAGGATGTGGTGTCCTGGACGTCCATGATTACGAGCTATGTTCGAGAAGGTAAACCTGGTAATGCGATTGAATTGTTTTGGGATATGTTGGATTTAGGGATTGAGCCTAATGGGTTTACTTTATCGGCTGTGATCAAGGCGTGTTCTGAGATTGGGAATTTGGTACTTGGTCGATGCTTTCATGGGTTAGTTGTTAGGCATGGATTCAATTCAAATCATGTCATTGTGAGTTCTCTGATAGACATGTACGGGAGAAACTTTGCTTCGAGCGATGCACGCCAGCTGTTCGATGAAATGCCTGAACCAGATGCAATATGTTGGACCTCTGTTATTTCAGCTCTTACAAGGAATGATTTGTATGAGGATGCATTGGGTTTCTTTTATTTGATGCTAAGAACTTATAGTTTGTCTCCTGATGGTTTTACATTTGGTTCTGTATTGACTGCCTGTGCTAATTTGGGGAGATTGAGGCAAGGTGAAGAAGTTCATGCTAAGGTGATTGCGCATGGACTTGGTGGGAATGTGGTGGTTGAGAGTAGTCTGGTGGATATGTATGGGAAATGTGGAGCGGTTGAGAAGTCTCAACGCGTGTTCGATAGGATGTCGAAGAGGAACTCGGTTTCGTGGTCTGCATTGCTTGGAGTATATTGCCAAAACGGAGACTTCGAAAAGGTTATAAATATCTTTAGGGGAATGGAGAAGATCGACCTCTACAGTTTCGGAACGGTTATTCGTGCGTGTGCTGGGTTAGCAGCTGTAACTCAAGGGAAGGAGGTTCACTGTCAGTATGTAAGAAAGGGTGGATGGAGAGATGTCATTGTGGAATCAGCTCTAGTCGACTTATACGCGAAATGTGGTTGTATTGATTTTGCATATCGAATCTTTGAGCAGATGCCAACAAGAAACTTGATCACGTGGAACTCGATGATTCGTGGGTTCGCTCAGAACGGAAGAAGTGGGATTTCTATTGAGATATTTGAAGAGATGATTAAGGAAGGGATTAAGCCTGATTATATCAGTTTTATTGGTGTTCTTTTTGCTTGTAGTCATACAGGTTTGGTCGATCAAGGGCGACATTACTTCGTTCGAATGACCGAGGAATATGGAATCAAACCAGGAATCGAGCATTATAATTGTATGGTTGATCTTCTCGGCCGAGCTGGGCTGCTAGAAGAAGCTGAAAATTTGATCGAAAACGCAGACTTCAGAAACGATTCGTCTCTTTGGCAGGTTCTTCTAGGGGCTTGTACTACCTCTACAAACTCTGGTACTGCAGAACGCATAGCCAAGAAAATGATGGAGCTTGAACCTCAACACCATTTAAGCTATGTTCTCCTGGCTAACGTGTACAGAGCAGTAGGCCGATGGGACGACGCGTTGACGATCAGGAAGTTGATGAAAAGCCGACAGGTGAAGAAGGTGCCTGGTCAGAGCTGGATGTAG

mRNA sequence

ATGAGACTCATCATCAAACGCCATTGCCGTAGTTTCACCTCTCAAAATCTAAAGAATTCGACACACCCACCAACAAAAGAGTCTCAAATTCTCCAATTTTGCGGCTCAGGCCTACTCCACGATGCTGTACACACCCTAAACTCCCTCGATTCCTTCGATTCCACCACCAACAAATCCATTCTCTACGCTTCTCTCCTGCAAACCTGCACCAAGGTTGCTTCCTTCAGCCATGGCCGTCAAATTCATGCCCATGTTCTTAAATCTGGCCTTGAAGCTGACCGGTTTGTTGGGAATAGCTTACTTTCTCTTTACTTTAAATTGGGTTCTGATGTCCGGCTGACTCGAAGAGTATTCGATGGTCTTTTTGTGAAGGATGTGGTGTCCTGGACGTCCATGATTACGAGCTATGTTCGAGAAGGTAAACCTGGTAATGCGATTGAATTGTTTTGGGATATGTTGGATTTAGGGATTGAGCCTAATGGGTTTACTTTATCGGCTGTGATCAAGGCGTGTTCTGAGATTGGGAATTTGGTACTTGGTCGATGCTTTCATGGGTTAGTTGTTAGGCATGGATTCAATTCAAATCATGTCATTGTGAGTTCTCTGATAGACATGTACGGGAGAAACTTTGCTTCGAGCGATGCACGCCAGCTGTTCGATGAAATGCCTGAACCAGATGCAATATGTTGGACCTCTGTTATTTCAGCTCTTACAAGGAATGATTTGTATGAGGATGCATTGGGTTTCTTTTATTTGATGCTAAGAACTTATAGTTTGTCTCCTGATGGTTTTACATTTGGTTCTGTATTGACTGCCTGTGCTAATTTGGGGAGATTGAGGCAAGGTGAAGAAGTTCATGCTAAGGTGATTGCGCATGGACTTGGTGGGAATGTGGTGGTTGAGAGTAGTCTGGTGGATATGTATGGGAAATGTGGAGCGGTTGAGAAGTCTCAACGCGTGTTCGATAGGATGTCGAAGAGGAACTCGGTTTCGTGGTCTGCATTGCTTGGAGTATATTGCCAAAACGGAGACTTCGAAAAGGTTATAAATATCTTTAGGGGAATGGAGAAGATCGACCTCTACAGTTTCGGAACGGTTATTCGTGCGTGTGCTGGGTTAGCAGCTGTAACTCAAGGGAAGGAGGTTCACTGTCAGTATGTAAGAAAGGGTGGATGGAGAGATGTCATTGTGGAATCAGCTCTAGTCGACTTATACGCGAAATGTGGTTGTATTGATTTTGCATATCGAATCTTTGAGCAGATGCCAACAAGAAACTTGATCACGTGGAACTCGATGATTCGTGGGTTCGCTCAGAACGGAAGAAGTGGGATTTCTATTGAGATATTTGAAGAGATGATTAAGGAAGGGATTAAGCCTGATTATATCAGTTTTATTGGTGTTCTTTTTGCTTGTAGTCATACAGGTTTGGTCGATCAAGGGCGACATTACTTCGTTCGAATGACCGAGGAATATGGAATCAAACCAGGAATCGAGCATTATAATTGTATGGTTGATCTTCTCGGCCGAGCTGGGCTGCTAGAAGAAGCTGAAAATTTGATCGAAAACGCAGACTTCAGAAACGATTCGTCTCTTTGGCAGGTTCTTCTAGGGGCTTGTACTACCTCTACAAACTCTGGTACTGCAGAACGCATAGCCAAGAAAATGATGGAGCTTGAACCTCAACACCATTTAAGCTATGTTCTCCTGGCTAACGTGTACAGAGCAGTAGGCCGATGGGACGACGCGTTGACGATCAGGAAGTTGATGAAAAGCCGACAGGTGAAGAAGGTGCCTGGTCAGAGCTGGATGTAG

Coding sequence (CDS)

ATGAGACTCATCATCAAACGCCATTGCCGTAGTTTCACCTCTCAAAATCTAAAGAATTCGACACACCCACCAACAAAAGAGTCTCAAATTCTCCAATTTTGCGGCTCAGGCCTACTCCACGATGCTGTACACACCCTAAACTCCCTCGATTCCTTCGATTCCACCACCAACAAATCCATTCTCTACGCTTCTCTCCTGCAAACCTGCACCAAGGTTGCTTCCTTCAGCCATGGCCGTCAAATTCATGCCCATGTTCTTAAATCTGGCCTTGAAGCTGACCGGTTTGTTGGGAATAGCTTACTTTCTCTTTACTTTAAATTGGGTTCTGATGTCCGGCTGACTCGAAGAGTATTCGATGGTCTTTTTGTGAAGGATGTGGTGTCCTGGACGTCCATGATTACGAGCTATGTTCGAGAAGGTAAACCTGGTAATGCGATTGAATTGTTTTGGGATATGTTGGATTTAGGGATTGAGCCTAATGGGTTTACTTTATCGGCTGTGATCAAGGCGTGTTCTGAGATTGGGAATTTGGTACTTGGTCGATGCTTTCATGGGTTAGTTGTTAGGCATGGATTCAATTCAAATCATGTCATTGTGAGTTCTCTGATAGACATGTACGGGAGAAACTTTGCTTCGAGCGATGCACGCCAGCTGTTCGATGAAATGCCTGAACCAGATGCAATATGTTGGACCTCTGTTATTTCAGCTCTTACAAGGAATGATTTGTATGAGGATGCATTGGGTTTCTTTTATTTGATGCTAAGAACTTATAGTTTGTCTCCTGATGGTTTTACATTTGGTTCTGTATTGACTGCCTGTGCTAATTTGGGGAGATTGAGGCAAGGTGAAGAAGTTCATGCTAAGGTGATTGCGCATGGACTTGGTGGGAATGTGGTGGTTGAGAGTAGTCTGGTGGATATGTATGGGAAATGTGGAGCGGTTGAGAAGTCTCAACGCGTGTTCGATAGGATGTCGAAGAGGAACTCGGTTTCGTGGTCTGCATTGCTTGGAGTATATTGCCAAAACGGAGACTTCGAAAAGGTTATAAATATCTTTAGGGGAATGGAGAAGATCGACCTCTACAGTTTCGGAACGGTTATTCGTGCGTGTGCTGGGTTAGCAGCTGTAACTCAAGGGAAGGAGGTTCACTGTCAGTATGTAAGAAAGGGTGGATGGAGAGATGTCATTGTGGAATCAGCTCTAGTCGACTTATACGCGAAATGTGGTTGTATTGATTTTGCATATCGAATCTTTGAGCAGATGCCAACAAGAAACTTGATCACGTGGAACTCGATGATTCGTGGGTTCGCTCAGAACGGAAGAAGTGGGATTTCTATTGAGATATTTGAAGAGATGATTAAGGAAGGGATTAAGCCTGATTATATCAGTTTTATTGGTGTTCTTTTTGCTTGTAGTCATACAGGTTTGGTCGATCAAGGGCGACATTACTTCGTTCGAATGACCGAGGAATATGGAATCAAACCAGGAATCGAGCATTATAATTGTATGGTTGATCTTCTCGGCCGAGCTGGGCTGCTAGAAGAAGCTGAAAATTTGATCGAAAACGCAGACTTCAGAAACGATTCGTCTCTTTGGCAGGTTCTTCTAGGGGCTTGTACTACCTCTACAAACTCTGGTACTGCAGAACGCATAGCCAAGAAAATGATGGAGCTTGAACCTCAACACCATTTAAGCTATGTTCTCCTGGCTAACGTGTACAGAGCAGTAGGCCGATGGGACGACGCGTTGACGATCAGGAAGTTGATGAAAAGCCGACAGGTGAAGAAGGTGCCTGGTCAGAGCTGGATGTAG

Protein sequence

MRLIIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKSILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQGRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACTTSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQSWM
BLAST of Carg19103 vs. NCBI nr
Match: XP_022930613.1 (pentatricopeptide repeat-containing protein At1g03540 [Cucurbita moschata])

HSP 1 Score: 1225.3 bits (3169), Expect = 0.0e+00
Identity = 599/603 (99.34%), Postives = 602/603 (99.83%), Query Frame = 0

Query: 1   MRLIIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKSI 60
           MRLIIKRHCRSFTSQNLKNSTHPPTK+SQILQFCGSGLL+DA+HTLNSLDSFDSTTNKSI
Sbjct: 1   MRLIIKRHCRSFTSQNLKNSTHPPTKQSQILQFCGSGLLYDALHTLNSLDSFDSTTNKSI 60

Query: 61  LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 120
           LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG
Sbjct: 61  LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 120

Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
           LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG
Sbjct: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180

Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
           RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN
Sbjct: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240

Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
           DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVI HGLGGNVVV
Sbjct: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIVHGLGGNVVV 300

Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
           ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL
Sbjct: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360

Query: 361 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 420
           YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ
Sbjct: 361 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 420

Query: 421 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 480
           MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG
Sbjct: 421 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 480

Query: 481 RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT 540
           RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT
Sbjct: 481 RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT 540

Query: 541 TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQ 600
           TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQ
Sbjct: 541 TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQ 600

Query: 601 SWM 604
           SWM
Sbjct: 601 SWM 603

BLAST of Carg19103 vs. NCBI nr
Match: XP_023529479.1 (pentatricopeptide repeat-containing protein At1g03540 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1223.0 bits (3163), Expect = 0.0e+00
Identity = 598/603 (99.17%), Postives = 600/603 (99.50%), Query Frame = 0

Query: 1   MRLIIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKSI 60
           MRL IKRHCRSFTSQNLKNSTHPPTKESQILQFCGS LLHDA+HTLNSLDSFDSTTNKSI
Sbjct: 1   MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 60

Query: 61  LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 120
           LYASLLQTCTKVASF+HGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSD RLTRRVFDG
Sbjct: 61  LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 120

Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
           LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG
Sbjct: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180

Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
           RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN
Sbjct: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240

Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
           DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV
Sbjct: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300

Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
           ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL
Sbjct: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360

Query: 361 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 420
           YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ
Sbjct: 361 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 420

Query: 421 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 480
           MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG
Sbjct: 421 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 480

Query: 481 RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT 540
           RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT
Sbjct: 481 RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT 540

Query: 541 TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQ 600
           TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQ
Sbjct: 541 TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQ 600

Query: 601 SWM 604
           SWM
Sbjct: 601 SWM 603

BLAST of Carg19103 vs. NCBI nr
Match: XP_022988714.1 (pentatricopeptide repeat-containing protein At1g03540 [Cucurbita maxima])

HSP 1 Score: 1211.8 bits (3134), Expect = 0.0e+00
Identity = 590/603 (97.84%), Postives = 597/603 (99.00%), Query Frame = 0

Query: 1   MRLIIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKSI 60
           MRL IKRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDA+HTLNSLDSF+STTNKSI
Sbjct: 1   MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDALHTLNSLDSFNSTTNKSI 60

Query: 61  LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 120
           LYASLLQTCTKVASFSHGRQIHAHVLKSGLE DRFVGNSLLSLYFKLGSD RLTRRVFDG
Sbjct: 61  LYASLLQTCTKVASFSHGRQIHAHVLKSGLETDRFVGNSLLSLYFKLGSDFRLTRRVFDG 120

Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
           LFVKDVVSWTSMITSYVREGKPGNAIE FWDMLDLGIEPNGFTLSAVIKACSEIGNL+LG
Sbjct: 121 LFVKDVVSWTSMITSYVREGKPGNAIEFFWDMLDLGIEPNGFTLSAVIKACSEIGNLILG 180

Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
           RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN
Sbjct: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240

Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
           DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV
Sbjct: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300

Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
           ESSLVDMYGKCGA+EKSQ VFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL
Sbjct: 301 ESSLVDMYGKCGAIEKSQLVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360

Query: 361 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 420
           YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFE+
Sbjct: 361 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFER 420

Query: 421 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 480
           MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG
Sbjct: 421 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 480

Query: 481 RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT 540
           RHYFV MTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFR+DSSLWQVLLGACT
Sbjct: 481 RHYFVLMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRSDSSLWQVLLGACT 540

Query: 541 TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQ 600
           TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALT+RKLMKSRQVKKVPGQ
Sbjct: 541 TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTVRKLMKSRQVKKVPGQ 600

Query: 601 SWM 604
           SWM
Sbjct: 601 SWM 603

BLAST of Carg19103 vs. NCBI nr
Match: XP_022147827.1 (pentatricopeptide repeat-containing protein At1g03540 [Momordica charantia])

HSP 1 Score: 1109.7 bits (2869), Expect = 0.0e+00
Identity = 536/603 (88.89%), Postives = 565/603 (93.70%), Query Frame = 0

Query: 1   MRLIIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKSI 60
           MRL  KRHC SFT  NLKN T+  TK SQ+LQ C SGLLHDA+H LNS+D FD+ TNK I
Sbjct: 1   MRLFFKRHCSSFTFHNLKNFTYASTKGSQVLQHCRSGLLHDALHILNSVDLFDTATNKPI 60

Query: 61  LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 120
           LYASLLQTC KVASFSHGRQIHAHV+KSGLE DRFVGNSLLSLYFKLGSD  LTRRVFDG
Sbjct: 61  LYASLLQTCIKVASFSHGRQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDYLLTRRVFDG 120

Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
           LFVKDVVSWTSMIT YVREGKPGNAIELFWDMLDLGIEPNGFT+SAVIKACSEIGNLVLG
Sbjct: 121 LFVKDVVSWTSMITGYVREGKPGNAIELFWDMLDLGIEPNGFTISAVIKACSEIGNLVLG 180

Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
           RCFHGLV+RHGF+SNHVIVSSLIDMYGRN AS+DARQLFDE+ EPDAICWTSVISA TRN
Sbjct: 181 RCFHGLVLRHGFDSNHVIVSSLIDMYGRNCASNDARQLFDELLEPDAICWTSVISAFTRN 240

Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
           DLYE+ALGFFY M RTY LSPDGFTFG+VLTAC NLGRLRQGEEVHAKVIAHGLGGNVVV
Sbjct: 241 DLYEEALGFFYSMQRTYRLSPDGFTFGTVLTACGNLGRLRQGEEVHAKVIAHGLGGNVVV 300

Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
           ESSLVDMYGKCGAV+KSQ VFDRMS+RNSVSWSALLGVYCQNGDFE VIN+FR ME++DL
Sbjct: 301 ESSLVDMYGKCGAVDKSQLVFDRMSRRNSVSWSALLGVYCQNGDFEMVINLFREMEEVDL 360

Query: 361 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 420
           YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ
Sbjct: 361 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 420

Query: 421 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 480
           MP++NLITWNSMIRGFAQNG+ GI+++IFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG
Sbjct: 421 MPSKNLITWNSMIRGFAQNGQGGIALQIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 480

Query: 481 RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT 540
           RHYF  MTE+YGIKPGIEHYNCMVDLLGR GLLEEAENLIENAD RNDSSLWQVLLGACT
Sbjct: 481 RHYFALMTEQYGIKPGIEHYNCMVDLLGRTGLLEEAENLIENADCRNDSSLWQVLLGACT 540

Query: 541 TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQ 600
           T TNS TAERIAKKMMELEP+HHLSYVLLANVYRAVGRWDDAL IRKLMK+RQVKK+PGQ
Sbjct: 541 TCTNSATAERIAKKMMELEPRHHLSYVLLANVYRAVGRWDDALKIRKLMKNRQVKKMPGQ 600

Query: 601 SWM 604
           SW+
Sbjct: 601 SWI 603

BLAST of Carg19103 vs. NCBI nr
Match: XP_004137012.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g03540 [Cucumis sativus] >KGN43587.1 hypothetical protein Csa_7G047230 [Cucumis sativus])

HSP 1 Score: 1015.0 bits (2623), Expect = 1.1e-292
Identity = 492/605 (81.32%), Postives = 540/605 (89.26%), Query Frame = 0

Query: 1   MRLIIKRHC-RSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKS 60
           M L +KRHC  SFTSQN K STHP  K SQILQFC SGLL+DA+H LNS+D +DS  NK 
Sbjct: 1   MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60

Query: 61  ILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFD 120
           +LYASLLQTC KV SF+ GRQ HAHV+KSGLE DRFVGNSLLSLYFKLGSD  LTRRVFD
Sbjct: 61  LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120

Query: 121 GLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVL 180
           GLFVKDVVSW SMIT YVREGK G AIELFWDMLD GIEPNGFTLSAVIKACSEIGNLVL
Sbjct: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180

Query: 181 GRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTR 240
           G+CFHG+VVR GF+SN VI+SSLIDMYGRN  SSDARQLFDE+ EPD +CWT+VISA TR
Sbjct: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240

Query: 241 NDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVV 300
           NDLYE+ALGFFYL  R + L PD +TFGSVLTAC NLGRLRQGEE+HAKVIA+G  GNVV
Sbjct: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300

Query: 301 VESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKID 360
            ESSLVDMYGKCGAVEKSQR+FDRMS RNSVSWSALL VYC NGD+EK +N+FR M+++D
Sbjct: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360

Query: 361 LYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFE 420
           LYSFGTVIRACAGLAAVT GKE+HCQY+RKGGWRDVIVESALVDLYAKCGCI+FAYR+F+
Sbjct: 361 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD 420

Query: 421 QMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQ 480
           +MPTRNLITWNSMI GFAQNG SGI+I+IFE MIKEGIKPD ISFIG+LFACSHTGLVDQ
Sbjct: 421 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480

Query: 481 GRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGAC 540
            RHYF  MT +YGIKPG+EHYNCMVDLLGRAGLLEEAENLIENA+ RNDSSLW VLLGAC
Sbjct: 481 ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC 540

Query: 541 TTS-TNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVP 600
           TT+ TNS TAERIAKK+MELEPQ +LSYV LANVYRAVGRWDDA+ +R+LMK+RQ+KK+P
Sbjct: 541 TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP 600

Query: 601 GQSWM 604
           GQSWM
Sbjct: 601 GQSWM 605

BLAST of Carg19103 vs. TAIR10
Match: AT1G03540.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 762.7 bits (1968), Expect = 1.7e-220
Identity = 371/604 (61.42%), Postives = 463/604 (76.66%), Query Frame = 0

Query: 3   LIIKRHCRSFTSQNL--KNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKSI 62
           +I+KRH     S  L    S+  PTK+S+IL+ C  G L +A+  LNS  S +       
Sbjct: 4   IILKRHFSQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPK- 63

Query: 63  LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 122
           LYASLLQTC KV SF HG Q HAHV+KSGLE DR VGNSLLSLYFKLG  +R TRRVFDG
Sbjct: 64  LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 123

Query: 123 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 182
            FVKD +SWTSM++ YV   +   A+E+F +M+  G++ N FTLS+ +KACSE+G + LG
Sbjct: 124 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 183

Query: 183 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 242
           RCFHG+V+ HGF  NH I S+L  +YG N    DAR++FDEMPEPD ICWT+V+SA ++N
Sbjct: 184 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 243

Query: 243 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 302
           DLYE+ALG FY M R   L PDG TFG+VLTAC NL RL+QG+E+H K+I +G+G NVVV
Sbjct: 244 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 303

Query: 303 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 362
           ESSL+DMYGKCG+V ++++VF+ MSK+NSVSWSALLG YCQNG+ EK I IFR ME+ DL
Sbjct: 304 ESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL 363

Query: 363 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 422
           Y FGTV++ACAGLAAV  GKE+H QYVR+G + +VIVESAL+DLY K GCID A R++ +
Sbjct: 364 YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSK 423

Query: 423 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 482
           M  RN+ITWN+M+   AQNGR   ++  F +M+K+GIKPDYISFI +L AC HTG+VD+G
Sbjct: 424 MSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEG 483

Query: 483 RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT 542
           R+YFV M + YGIKPG EHY+CM+DLLGRAGL EEAENL+E A+ RND+SLW VLLG C 
Sbjct: 484 RNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCA 543

Query: 543 TSTN-SGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPG 602
            + + S  AERIAK+MMELEP++H+SYVLL+N+Y+A+GR  DAL IRKLM  R V K  G
Sbjct: 544 ANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVG 603

Query: 603 QSWM 604
           QSW+
Sbjct: 604 QSWI 606

BLAST of Carg19103 vs. TAIR10
Match: AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 383.3 bits (983), Expect = 2.8e-106
Identity = 199/549 (36.25%), Postives = 322/549 (58.65%), Query Frame = 0

Query: 60  ILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFD 119
           + +  +L T  KV S + G+Q+H   LK GL+    V NSL+++Y KL       R VFD
Sbjct: 316 VTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKL-RKFGFARTVFD 375

Query: 120 GLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEI-GNLV 179
            +  +D++SW S+I    + G    A+ LF  +L  G++P+ +T+++V+KA S +   L 
Sbjct: 376 NMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLS 435

Query: 180 LGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALT 239
           L +  H   ++    S+  + ++LID Y RN    +A  LF E    D + W ++++  T
Sbjct: 436 LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYT 495

Query: 240 RNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNV 299
           ++      L  F LM +    S D FT  +V   C  L  + QG++VHA  I  G   ++
Sbjct: 496 QSHDGHKTLKLFALMHKQGERS-DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 555

Query: 300 VVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKI 359
            V S ++DMY KCG +  +Q  FD +   + V+W+ ++    +NG+ E+  ++F  M  +
Sbjct: 556 WVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLM 615

Query: 360 ----DLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFA 419
               D ++  T+ +A + L A+ QG+++H   ++     D  V ++LVD+YAKCG ID A
Sbjct: 616 GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDA 675

Query: 420 YRIFEQMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHT 479
           Y +F+++   N+  WN+M+ G AQ+G    ++++F++M   GIKPD ++FIGVL ACSH+
Sbjct: 676 YCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHS 735

Query: 480 GLVDQGRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQV 539
           GLV +   +   M  +YGIKP IEHY+C+ D LGRAGL+++AENLIE+      +S+++ 
Sbjct: 736 GLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRT 795

Query: 540 LLGACTTSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQV 599
           LL AC    ++ T +R+A K++ELEP    +YVLL+N+Y A  +WD+    R +MK  +V
Sbjct: 796 LLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKV 855

Query: 600 KKVPGQSWM 604
           KK PG SW+
Sbjct: 856 KKDPGFSWI 861

BLAST of Carg19103 vs. TAIR10
Match: AT3G49170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 380.6 bits (976), Expect = 1.8e-105
Identity = 196/551 (35.57%), Postives = 324/551 (58.80%), Query Frame = 0

Query: 62  YASLLQTCTKVASFSHGRQIHAHVLKSG-LEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 121
           Y ++++ C+       GR     ++K+G  E+D  VG SL+ ++ K  +      +VFD 
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228

Query: 122 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 181
           +   +VV+WT MIT  ++ G P  AI  F DM+  G E + FTLS+V  AC+E+ NL LG
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288

Query: 182 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFAS---SDARQLFDEMPEPDAICWTSVISAL 241
           +  H   +R G   +  +  SL+DMY +  A     D R++FD M +   + WT++I+  
Sbjct: 289 KQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 348

Query: 242 TRN-DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGG 301
            +N +L  +A+  F  M+    + P+ FTF S   AC NL   R G++V  +    GL  
Sbjct: 349 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 408

Query: 302 NVVVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGME 361
           N  V +S++ M+ K   +E +QR F+ +S++N VS++  L   C+N +FE+   +   + 
Sbjct: 409 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 468

Query: 362 KIDL----YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCID 421
           + +L    ++F +++   A + ++ +G+++H Q V+ G   +  V +AL+ +Y+KCG ID
Sbjct: 469 ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSID 528

Query: 422 FAYRIFEQMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACS 481
            A R+F  M  RN+I+W SMI GFA++G +   +E F +MI+EG+KP+ ++++ +L ACS
Sbjct: 529 TASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 588

Query: 482 HTGLVDQGRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLW 541
           H GLV +G  +F  M E++ IKP +EHY CMVDLL RAGLL +A   I    F+ D  +W
Sbjct: 589 HVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVW 648

Query: 542 QVLLGACTTSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSR 601
           +  LGAC   +N+   +  A+K++EL+P    +Y+ L+N+Y   G+W+++  +R+ MK R
Sbjct: 649 RTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKER 708

Query: 602 QVKKVPGQSWM 604
            + K  G SW+
Sbjct: 709 NLVKEGGCSWI 717

BLAST of Carg19103 vs. TAIR10
Match: AT3G02330.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 379.0 bits (972), Expect = 5.4e-105
Identity = 202/593 (34.06%), Postives = 335/593 (56.49%), Query Frame = 0

Query: 36  SGLLHDAVHTLNSLDSFDSTTNKSILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRF 95
           + LL  A+     +   ++  ++SI YAS+L++C  ++    G Q+HAH LKS   AD  
Sbjct: 259 NNLLSLALKFFKEMQKVNAGVSQSI-YASVLRSCAALSELRLGGQLHAHALKSDFAADGI 318

Query: 96  VGNSLLSLYFKLGSDVRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDL 155
           V  + L +Y K   +++  + +FD     +  S+ +MIT Y +E     A+ LF  ++  
Sbjct: 319 VRTATLDMYAKC-DNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS 378

Query: 156 GIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDA 215
           G+  +  +LS V +AC+ +  L  G   +GL ++   + +  + ++ IDMYG+  A ++A
Sbjct: 379 GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEA 438

Query: 216 RQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACAN 275
            ++FDEM   DA+ W ++I+A  +N    + L  F  MLR+  + PD FTFGS+L AC  
Sbjct: 439 FRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS-RIEPDEFTFGSILKACTG 498

Query: 276 LGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSKRNS------ 335
            G L  G E+H+ ++  G+  N  V  SL+DMY KCG +E+++++  R  +R +      
Sbjct: 499 -GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVXXXXX 558

Query: 336 --------------VSWSALLGVYCQNGDFEKVINIFRGMEKI----DLYSFGTVIRACA 395
                         VSW++++  Y      E    +F  M ++    D +++ TV+  CA
Sbjct: 559 XXXXXXXXXXXXXXVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCA 618

Query: 396 GLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQMPTRNLITWNS 455
            LA+   GK++H Q ++K    DV + S LVD+Y+KCG +  +  +FE+   R+ +TWN+
Sbjct: 619 NLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNA 678

Query: 456 MIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQGRHYFVRMTEEY 515
           MI G+A +G+   +I++FE MI E IKP++++FI +L AC+H GL+D+G  YF  M  +Y
Sbjct: 679 MICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDY 738

Query: 516 GIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACTTSTNS-GTAER 575
           G+ P + HY+ MVD+LG++G ++ A  LI    F  D  +W+ LLG CT   N+   AE 
Sbjct: 739 GLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEE 798

Query: 576 IAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQSWM 604
               ++ L+PQ   +Y LL+NVY   G W+    +R+ M+  ++KK PG SW+
Sbjct: 799 ATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 847

BLAST of Carg19103 vs. TAIR10
Match: AT3G02010.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 377.5 bits (968), Expect = 1.6e-104
Identity = 201/560 (35.89%), Postives = 312/560 (55.71%), Query Frame = 0

Query: 51  SFDSTTNKSILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRF--VGNSLLSLYFKLG 110
           S   T    + + +LL  C      +   Q+HA  +K G + + F  V N LL  Y ++ 
Sbjct: 139 SSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV- 198

Query: 111 SDVRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVI 170
             + L   +F+ +  KD V++ ++IT Y ++G    +I LF  M   G +P+ FT S V+
Sbjct: 199 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 258

Query: 171 KACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAI 230
           KA   + +  LG+  H L V  GF+ +  + + ++D Y ++    + R LFDEMPE D +
Sbjct: 259 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV 318

Query: 231 CWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAK 290
            +  VIS+ ++ D YE +L FF  M +        F F ++L+  ANL  L+ G ++H +
Sbjct: 319 SYNVVISSYSQADQYEASLHFFREM-QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 378

Query: 291 VIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKV 350
            +       + V +SLVDMY KC   E+++ +F  + +R +VSW+AL+  Y Q G     
Sbjct: 379 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 438

Query: 351 INIFRGME----KIDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDL 410
           + +F  M     + D  +F TV++A A  A++  GK++H   +R G   +V   S LVD+
Sbjct: 439 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 498

Query: 411 YAKCGCIDFAYRIFEQMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISF 470
           YAKCG I  A ++FE+MP RN ++WN++I   A NG    +I  F +MI+ G++PD +S 
Sbjct: 499 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 558

Query: 471 IGVLFACSHTGLVDQGRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENAD 530
           +GVL ACSH G V+QG  YF  M+  YGI P  +HY CM+DLLGR G   EAE L++   
Sbjct: 559 LGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP 618

Query: 531 FRNDSSLWQVLLGACTTSTNSGTAERIAKKMMELEP-QHHLSYVLLANVYRAVGRWDDAL 590
           F  D  +W  +L AC    N   AER A+K+  +E  +   +YV ++N+Y A G W+   
Sbjct: 619 FEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVR 678

Query: 591 TIRKLMKSRQVKKVPGQSWM 604
            ++K M+ R +KKVP  SW+
Sbjct: 679 DVKKAMRERGIKKVPAYSWV 696

BLAST of Carg19103 vs. Swiss-Prot
Match: sp|Q9LR69|PPR8_ARATH (Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E4 PE=2 SV=1)

HSP 1 Score: 762.7 bits (1968), Expect = 3.1e-219
Identity = 371/604 (61.42%), Postives = 463/604 (76.66%), Query Frame = 0

Query: 3   LIIKRHCRSFTSQNL--KNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKSI 62
           +I+KRH     S  L    S+  PTK+S+IL+ C  G L +A+  LNS  S +       
Sbjct: 4   IILKRHFSQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPK- 63

Query: 63  LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 122
           LYASLLQTC KV SF HG Q HAHV+KSGLE DR VGNSLLSLYFKLG  +R TRRVFDG
Sbjct: 64  LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 123

Query: 123 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 182
            FVKD +SWTSM++ YV   +   A+E+F +M+  G++ N FTLS+ +KACSE+G + LG
Sbjct: 124 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 183

Query: 183 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 242
           RCFHG+V+ HGF  NH I S+L  +YG N    DAR++FDEMPEPD ICWT+V+SA ++N
Sbjct: 184 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 243

Query: 243 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 302
           DLYE+ALG FY M R   L PDG TFG+VLTAC NL RL+QG+E+H K+I +G+G NVVV
Sbjct: 244 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 303

Query: 303 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 362
           ESSL+DMYGKCG+V ++++VF+ MSK+NSVSWSALLG YCQNG+ EK I IFR ME+ DL
Sbjct: 304 ESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL 363

Query: 363 YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQ 422
           Y FGTV++ACAGLAAV  GKE+H QYVR+G + +VIVESAL+DLY K GCID A R++ +
Sbjct: 364 YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSK 423

Query: 423 MPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQG 482
           M  RN+ITWN+M+   AQNGR   ++  F +M+K+GIKPDYISFI +L AC HTG+VD+G
Sbjct: 424 MSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEG 483

Query: 483 RHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACT 542
           R+YFV M + YGIKPG EHY+CM+DLLGRAGL EEAENL+E A+ RND+SLW VLLG C 
Sbjct: 484 RNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCA 543

Query: 543 TSTN-SGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPG 602
            + + S  AERIAK+MMELEP++H+SYVLL+N+Y+A+GR  DAL IRKLM  R V K  G
Sbjct: 544 ANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVG 603

Query: 603 QSWM 604
           QSW+
Sbjct: 604 QSWI 606

BLAST of Carg19103 vs. Swiss-Prot
Match: sp|Q9SMZ2|PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 5.1e-105
Identity = 199/549 (36.25%), Postives = 322/549 (58.65%), Query Frame = 0

Query: 60  ILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFD 119
           + +  +L T  KV S + G+Q+H   LK GL+    V NSL+++Y KL       R VFD
Sbjct: 316 VTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKL-RKFGFARTVFD 375

Query: 120 GLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEI-GNLV 179
            +  +D++SW S+I    + G    A+ LF  +L  G++P+ +T+++V+KA S +   L 
Sbjct: 376 NMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLS 435

Query: 180 LGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALT 239
           L +  H   ++    S+  + ++LID Y RN    +A  LF E    D + W ++++  T
Sbjct: 436 LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYT 495

Query: 240 RNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNV 299
           ++      L  F LM +    S D FT  +V   C  L  + QG++VHA  I  G   ++
Sbjct: 496 QSHDGHKTLKLFALMHKQGERS-DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 555

Query: 300 VVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKI 359
            V S ++DMY KCG +  +Q  FD +   + V+W+ ++    +NG+ E+  ++F  M  +
Sbjct: 556 WVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLM 615

Query: 360 ----DLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFA 419
               D ++  T+ +A + L A+ QG+++H   ++     D  V ++LVD+YAKCG ID A
Sbjct: 616 GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDA 675

Query: 420 YRIFEQMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHT 479
           Y +F+++   N+  WN+M+ G AQ+G    ++++F++M   GIKPD ++FIGVL ACSH+
Sbjct: 676 YCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHS 735

Query: 480 GLVDQGRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQV 539
           GLV +   +   M  +YGIKP IEHY+C+ D LGRAGL+++AENLIE+      +S+++ 
Sbjct: 736 GLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRT 795

Query: 540 LLGACTTSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQV 599
           LL AC    ++ T +R+A K++ELEP    +YVLL+N+Y A  +WD+    R +MK  +V
Sbjct: 796 LLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKV 855

Query: 600 KKVPGQSWM 604
           KK PG SW+
Sbjct: 856 KKDPGFSWI 861

BLAST of Carg19103 vs. Swiss-Prot
Match: sp|Q5G1T1|PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2261 PE=2 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 3.3e-104
Identity = 196/551 (35.57%), Postives = 324/551 (58.80%), Query Frame = 0

Query: 62  YASLLQTCTKVASFSHGRQIHAHVLKSG-LEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 121
           Y ++++ C+       GR     ++K+G  E+D  VG SL+ ++ K  +      +VFD 
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228

Query: 122 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 181
           +   +VV+WT MIT  ++ G P  AI  F DM+  G E + FTLS+V  AC+E+ NL LG
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288

Query: 182 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFAS---SDARQLFDEMPEPDAICWTSVISAL 241
           +  H   +R G   +  +  SL+DMY +  A     D R++FD M +   + WT++I+  
Sbjct: 289 KQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 348

Query: 242 TRN-DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGG 301
            +N +L  +A+  F  M+    + P+ FTF S   AC NL   R G++V  +    GL  
Sbjct: 349 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 408

Query: 302 NVVVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGME 361
           N  V +S++ M+ K   +E +QR F+ +S++N VS++  L   C+N +FE+   +   + 
Sbjct: 409 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 468

Query: 362 KIDL----YSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCID 421
           + +L    ++F +++   A + ++ +G+++H Q V+ G   +  V +AL+ +Y+KCG ID
Sbjct: 469 ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSID 528

Query: 422 FAYRIFEQMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACS 481
            A R+F  M  RN+I+W SMI GFA++G +   +E F +MI+EG+KP+ ++++ +L ACS
Sbjct: 529 TASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 588

Query: 482 HTGLVDQGRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLW 541
           H GLV +G  +F  M E++ IKP +EHY CMVDLL RAGLL +A   I    F+ D  +W
Sbjct: 589 HVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVW 648

Query: 542 QVLLGACTTSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSR 601
           +  LGAC   +N+   +  A+K++EL+P    +Y+ L+N+Y   G+W+++  +R+ MK R
Sbjct: 649 RTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKER 708

Query: 602 QVKKVPGQSWM 604
            + K  G SW+
Sbjct: 709 NLVKEGGCSWI 717

BLAST of Carg19103 vs. Swiss-Prot
Match: sp|Q9FWA6|PP207_ARATH (Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E90 PE=2 SV=2)

HSP 1 Score: 379.0 bits (972), Expect = 9.7e-104
Identity = 202/593 (34.06%), Postives = 335/593 (56.49%), Query Frame = 0

Query: 36  SGLLHDAVHTLNSLDSFDSTTNKSILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRF 95
           + LL  A+     +   ++  ++SI YAS+L++C  ++    G Q+HAH LKS   AD  
Sbjct: 259 NNLLSLALKFFKEMQKVNAGVSQSI-YASVLRSCAALSELRLGGQLHAHALKSDFAADGI 318

Query: 96  VGNSLLSLYFKLGSDVRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDL 155
           V  + L +Y K   +++  + +FD     +  S+ +MIT Y +E     A+ LF  ++  
Sbjct: 319 VRTATLDMYAKC-DNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS 378

Query: 156 GIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDA 215
           G+  +  +LS V +AC+ +  L  G   +GL ++   + +  + ++ IDMYG+  A ++A
Sbjct: 379 GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEA 438

Query: 216 RQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACAN 275
            ++FDEM   DA+ W ++I+A  +N    + L  F  MLR+  + PD FTFGS+L AC  
Sbjct: 439 FRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS-RIEPDEFTFGSILKACTG 498

Query: 276 LGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSKRNS------ 335
            G L  G E+H+ ++  G+  N  V  SL+DMY KCG +E+++++  R  +R +      
Sbjct: 499 -GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVXXXXX 558

Query: 336 --------------VSWSALLGVYCQNGDFEKVINIFRGMEKI----DLYSFGTVIRACA 395
                         VSW++++  Y      E    +F  M ++    D +++ TV+  CA
Sbjct: 559 XXXXXXXXXXXXXXVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCA 618

Query: 396 GLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQMPTRNLITWNS 455
            LA+   GK++H Q ++K    DV + S LVD+Y+KCG +  +  +FE+   R+ +TWN+
Sbjct: 619 NLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNA 678

Query: 456 MIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQGRHYFVRMTEEY 515
           MI G+A +G+   +I++FE MI E IKP++++FI +L AC+H GL+D+G  YF  M  +Y
Sbjct: 679 MICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDY 738

Query: 516 GIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACTTSTNS-GTAER 575
           G+ P + HY+ MVD+LG++G ++ A  LI    F  D  +W+ LLG CT   N+   AE 
Sbjct: 739 GLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEE 798

Query: 576 IAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQSWM 604
               ++ L+PQ   +Y LL+NVY   G W+    +R+ M+  ++KK PG SW+
Sbjct: 799 ATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 847

BLAST of Carg19103 vs. Swiss-Prot
Match: sp|Q9S7F4|PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H36 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 2.8e-103
Identity = 201/560 (35.89%), Postives = 312/560 (55.71%), Query Frame = 0

Query: 51  SFDSTTNKSILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRF--VGNSLLSLYFKLG 110
           S   T    + + +LL  C      +   Q+HA  +K G + + F  V N LL  Y ++ 
Sbjct: 139 SSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV- 198

Query: 111 SDVRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVI 170
             + L   +F+ +  KD V++ ++IT Y ++G    +I LF  M   G +P+ FT S V+
Sbjct: 199 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 258

Query: 171 KACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAI 230
           KA   + +  LG+  H L V  GF+ +  + + ++D Y ++    + R LFDEMPE D +
Sbjct: 259 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV 318

Query: 231 CWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAK 290
            +  VIS+ ++ D YE +L FF  M +        F F ++L+  ANL  L+ G ++H +
Sbjct: 319 SYNVVISSYSQADQYEASLHFFREM-QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 378

Query: 291 VIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKV 350
            +       + V +SLVDMY KC   E+++ +F  + +R +VSW+AL+  Y Q G     
Sbjct: 379 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 438

Query: 351 INIFRGME----KIDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDL 410
           + +F  M     + D  +F TV++A A  A++  GK++H   +R G   +V   S LVD+
Sbjct: 439 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 498

Query: 411 YAKCGCIDFAYRIFEQMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISF 470
           YAKCG I  A ++FE+MP RN ++WN++I   A NG    +I  F +MI+ G++PD +S 
Sbjct: 499 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 558

Query: 471 IGVLFACSHTGLVDQGRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENAD 530
           +GVL ACSH G V+QG  YF  M+  YGI P  +HY CM+DLLGR G   EAE L++   
Sbjct: 559 LGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP 618

Query: 531 FRNDSSLWQVLLGACTTSTNSGTAERIAKKMMELEP-QHHLSYVLLANVYRAVGRWDDAL 590
           F  D  +W  +L AC    N   AER A+K+  +E  +   +YV ++N+Y A G W+   
Sbjct: 619 FEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVR 678

Query: 591 TIRKLMKSRQVKKVPGQSWM 604
            ++K M+ R +KKVP  SW+
Sbjct: 679 DVKKAMRERGIKKVPAYSWV 696

BLAST of Carg19103 vs. TrEMBL
Match: tr|A0A0A0K5P0|A0A0A0K5P0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047230 PE=4 SV=1)

HSP 1 Score: 1015.0 bits (2623), Expect = 7.0e-293
Identity = 492/605 (81.32%), Postives = 540/605 (89.26%), Query Frame = 0

Query: 1   MRLIIKRHC-RSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKS 60
           M L +KRHC  SFTSQN K STHP  K SQILQFC SGLL+DA+H LNS+D +DS  NK 
Sbjct: 1   MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60

Query: 61  ILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFD 120
           +LYASLLQTC KV SF+ GRQ HAHV+KSGLE DRFVGNSLLSLYFKLGSD  LTRRVFD
Sbjct: 61  LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120

Query: 121 GLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVL 180
           GLFVKDVVSW SMIT YVREGK G AIELFWDMLD GIEPNGFTLSAVIKACSEIGNLVL
Sbjct: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180

Query: 181 GRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTR 240
           G+CFHG+VVR GF+SN VI+SSLIDMYGRN  SSDARQLFDE+ EPD +CWT+VISA TR
Sbjct: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240

Query: 241 NDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVV 300
           NDLYE+ALGFFYL  R + L PD +TFGSVLTAC NLGRLRQGEE+HAKVIA+G  GNVV
Sbjct: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300

Query: 301 VESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKID 360
            ESSLVDMYGKCGAVEKSQR+FDRMS RNSVSWSALL VYC NGD+EK +N+FR M+++D
Sbjct: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360

Query: 361 LYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFE 420
           LYSFGTVIRACAGLAAVT GKE+HCQY+RKGGWRDVIVESALVDLYAKCGCI+FAYR+F+
Sbjct: 361 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFD 420

Query: 421 QMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQ 480
           +MPTRNLITWNSMI GFAQNG SGI+I+IFE MIKEGIKPD ISFIG+LFACSHTGLVDQ
Sbjct: 421 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480

Query: 481 GRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGAC 540
            RHYF  MT +YGIKPG+EHYNCMVDLLGRAGLLEEAENLIENA+ RNDSSLW VLLGAC
Sbjct: 481 ARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGAC 540

Query: 541 TTS-TNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVP 600
           TT+ TNS TAERIAKK+MELEPQ +LSYV LANVYRAVGRWDDA+ +R+LMK+RQ+KK+P
Sbjct: 541 TTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMP 600

Query: 601 GQSWM 604
           GQSWM
Sbjct: 601 GQSWM 605

BLAST of Carg19103 vs. TrEMBL
Match: tr|A0A1S3C0U7|A0A1S3C0U7_CUCME (pentatricopeptide repeat-containing protein At1g03540 OS=Cucumis melo OX=3656 GN=LOC103495534 PE=4 SV=1)

HSP 1 Score: 959.1 bits (2478), Expect = 4.6e-276
Identity = 476/605 (78.68%), Postives = 515/605 (85.12%), Query Frame = 0

Query: 1   MRLIIKRHC-RSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKS 60
           M L  KRHC  SFTSQN K STH   K  QILQFC SGLL+DA+H LNS+D +DS  NK 
Sbjct: 1   MMLFFKRHCTSSFTSQNFKYSTHLSNKLFQILQFCKSGLLNDALHILNSVDLYDSRINKP 60

Query: 61  ILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFD 120
           +LYASLLQTCTKV SFS G Q HAHV+KSGLE DRFVGNSLLSLYFKLGS+  LTRRVFD
Sbjct: 61  LLYASLLQTCTKVDSFSSGCQFHAHVVKSGLETDRFVGNSLLSLYFKLGSNCLLTRRVFD 120

Query: 121 GLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVL 180
           GLFVKDVVSW SMIT YVREGK G AIELFWDMLD GIEPN FTLS VIKACSEIGNLVL
Sbjct: 121 GLFVKDVVSWASMITGYVREGKSGMAIELFWDMLDSGIEPNDFTLSTVIKACSEIGNLVL 180

Query: 181 GRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTR 240
           G+CFHG+VVR GF+SN VI+SSLIDMYGRN+ SS+ARQLFDE+ EPD +CWT+VISA TR
Sbjct: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNYLSSEARQLFDELLEPDPVCWTTVISAFTR 240

Query: 241 NDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVV 300
           ND YE+ALGFFYLM R Y LSPD +TFGSVLTAC NLGRL+QGEE+HAKVIA+G GGNVV
Sbjct: 241 NDFYEEALGFFYLMHRAYRLSPDNYTFGSVLTACGNLGRLKQGEEIHAKVIAYGFGGNVV 300

Query: 301 VESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKID 360
           VESSLVDMYGKCGAVEKSQRVFDRMS RNSVSWSALL VYCQNGDFEKV+++FR M+K+D
Sbjct: 301 VESSLVDMYGKCGAVEKSQRVFDRMSNRNSVSWSALLAVYCQNGDFEKVVSLFREMKKVD 360

Query: 361 LYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFE 420
           LYSFGTV+RACAGLAAV  GKEVHCQY+RKGGWRDVIVESALVDLYAKCG IDFAYRIFE
Sbjct: 361 LYSFGTVLRACAGLAAVAPGKEVHCQYIRKGGWRDVIVESALVDLYAKCGSIDFAYRIFE 420

Query: 421 QMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQ 480
           +MPTRNLIT                       MIKEGIKPD ISFIG+LFACSHTGLVDQ
Sbjct: 421 RMPTRNLITXXXXXXXXXXXXXXXXXXXXXXAMIKEGIKPDCISFIGLLFACSHTGLVDQ 480

Query: 481 GRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGAC 540
            RHYF  MT EYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENAD RNDS+LW VLLGA 
Sbjct: 481 ARHYFDLMTGEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADCRNDSALWLVLLGAS 540

Query: 541 T-TSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVP 600
           T T TNS  AERIAKK+MELEPQ +LSYV LAN YRAVGRWDDA+ +R+LMK+RQ+KK+P
Sbjct: 541 TATWTNSAIAERIAKKLMELEPQCYLSYVHLANFYRAVGRWDDAVKVRELMKNRQLKKMP 600

Query: 601 GQSWM 604
           GQSWM
Sbjct: 601 GQSWM 605

BLAST of Carg19103 vs. TrEMBL
Match: tr|A0A2N9EWB8|A0A2N9EWB8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6833 PE=4 SV=1)

HSP 1 Score: 953.4 bits (2463), Expect = 2.5e-274
Identity = 463/598 (77.42%), Postives = 516/598 (86.29%), Query Frame = 0

Query: 6   KRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKSILYASL 65
           KRHC SF +  L+N+  P TK+SQIL FC  G L DA+  LNS +S D    K I+YASL
Sbjct: 8   KRHC-SFLTLTLQNTKTPSTKQSQILYFCKLGALPDALRLLNSANSADIVV-KPIVYASL 67

Query: 66  LQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDGLFVKD 125
           LQTCTKV SF+HG QIHAHV+KSGLE DRFVGNSLLSLYFKLG D   TRRVFDGLFVKD
Sbjct: 68  LQTCTKVVSFNHGLQIHAHVVKSGLETDRFVGNSLLSLYFKLGRDFSETRRVFDGLFVKD 127

Query: 126 VVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHG 185
           V+SWTSM++ YVR GKP N++ELFW+ML  G+EPNGFTLSAVIKACSE+G L LGRCFHG
Sbjct: 128 VISWTSMVSGYVRAGKPRNSLELFWEMLAFGVEPNGFTLSAVIKACSELGELRLGRCFHG 187

Query: 186 LVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRNDLYED 245
           +V+RHGF+SNHVI S+LIDMYGRN+ S DARQLFDE+PEPD ICWTSVISA TRNDL+E+
Sbjct: 188 VVMRHGFDSNHVISSALIDMYGRNYESRDARQLFDELPEPDTICWTSVISAFTRNDLFEE 247

Query: 246 ALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVESSLV 305
           ALGFFY M R   LSPD FTFG+VLTAC NLGRL+ G EVHAKV+  GL GNV VESSLV
Sbjct: 248 ALGFFYTMQRNRGLSPDEFTFGTVLTACGNLGRLKLGREVHAKVMTSGLCGNVFVESSLV 307

Query: 306 DMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDLYSFGT 365
           DMYGKCG+V++S+RVFDRM +RNSVSWSALLGVYCQNGDFE VI IFR M + DLY FGT
Sbjct: 308 DMYGKCGSVDESRRVFDRMPRRNSVSWSALLGVYCQNGDFESVIKIFREMAETDLYCFGT 367

Query: 366 VIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQMPTRN 425
           V+RACAGLAAV QGKEVHCQYV++GGWRDVIVESALV LYAKCGCI FAYRIF QM  RN
Sbjct: 368 VLRACAGLAAVRQGKEVHCQYVKRGGWRDVIVESALVCLYAKCGCISFAYRIFMQMSVRN 427

Query: 426 LITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQGRHYFV 485
           LITWNSMI GFAQNG+   ++ IF+EMIKEGIKPDYISFIGVLFACSHTGLVDQGR YF+
Sbjct: 428 LITWNSMICGFAQNGKGEEALRIFDEMIKEGIKPDYISFIGVLFACSHTGLVDQGRKYFI 487

Query: 486 RMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACTTSTNS 545
            MTE+YGIK GIEHYNCMVDLLGRAGLLEEAENLIENAD +N+SSLW VLLGACTT TNS
Sbjct: 488 SMTEDYGIKAGIEHYNCMVDLLGRAGLLEEAENLIENADCKNESSLWAVLLGACTTCTNS 547

Query: 546 GTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQSWM 604
            TAERIAKKMMELEP +HLSYVLLANVYRAVGRWDDA  IR++M++R VKK+PG+SW+
Sbjct: 548 ITAERIAKKMMELEPDYHLSYVLLANVYRAVGRWDDASEIRRVMENRGVKKMPGRSWI 603

BLAST of Carg19103 vs. TrEMBL
Match: tr|A0A1R3J2H0|A0A1R3J2H0_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_08075 PE=4 SV=1)

HSP 1 Score: 935.3 bits (2416), Expect = 7.1e-269
Identity = 449/601 (74.71%), Postives = 517/601 (86.02%), Query Frame = 0

Query: 6   KRHCRSFTSQNLKNSTH-PPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTN--KSILY 65
           KRHC SF S N +N+   P  K SQIL FC S  L  A+H LN+L+    TT+  K +LY
Sbjct: 8   KRHCCSFASLNPQNNIEIPLDKHSQILHFCRSAQLLPAIHLLNTLNIPTETTSSKKPLLY 67

Query: 66  ASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDGLF 125
           ASLLQTCTKV SF+HG + HAHV+KSGL+ DRFVGNSLL+LYFKLG D R TRRVFDGLF
Sbjct: 68  ASLLQTCTKVQSFAHGLRFHAHVIKSGLDTDRFVGNSLLALYFKLGHDFRETRRVFDGLF 127

Query: 126 VKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRC 185
           VKDV+SWTSM++ Y+R GKP +++E+FW+MLD G+EPNGFTLS+VIKACSE+G L LG C
Sbjct: 128 VKDVISWTSMVSGYIRAGKPESSLEMFWEMLDFGVEPNGFTLSSVIKACSELGKLRLGWC 187

Query: 186 FHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRNDL 245
           FHG+VV+ GF+SN VI S+LID YGRN   ++A QLF+E+PEPDAICWTS+ISALTRNDL
Sbjct: 188 FHGVVVKRGFDSNLVISSALIDFYGRNLQLNEACQLFEELPEPDAICWTSIISALTRNDL 247

Query: 246 YEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVES 305
           Y +AL FFY M R Y LSPDG+TFG++LTACANLGRLRQG+++HAKVI  GL GNVVVES
Sbjct: 248 YGEALNFFYSMHRNYGLSPDGYTFGTILTACANLGRLRQGKQLHAKVITTGLCGNVVVES 307

Query: 306 SLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDLYS 365
           SL+DMYGKCG V +S+R+FDRMSK+NSVSWSALLGVYCQN D+E VI IFRGM+++DLY 
Sbjct: 308 SLLDMYGKCGLVNESRRIFDRMSKKNSVSWSALLGVYCQNKDYESVIRIFRGMDEVDLYC 367

Query: 366 FGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQMP 425
           FGT+IRACAGLAAV QGKEVHCQYVRKGGW++VIVESALVDLYAKCGCIDFA+RIF QM 
Sbjct: 368 FGTIIRACAGLAAVRQGKEVHCQYVRKGGWKNVIVESALVDLYAKCGCIDFAHRIFIQMS 427

Query: 426 TRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQGRH 485
            RNLITWNSMI GFAQNGR   +++IF+EMI EGIKPDYISFIGVLFACSHTGLVDQGR 
Sbjct: 428 IRNLITWNSMIYGFAQNGRGVEALKIFDEMINEGIKPDYISFIGVLFACSHTGLVDQGRK 487

Query: 486 YFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACTTS 545
           YF  M +EYGIKPGIEHYNCMVDLLGRAGLLEEAENLIE+ADFRNDSSLW VLLGACTT 
Sbjct: 488 YFTSMIKEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIESADFRNDSSLWAVLLGACTTC 547

Query: 546 TNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQSW 604
           T+S TAERIA+KM+EL P +H+SYVLLANVYRAVGRW DAL +RKLMK R VKK+ G+SW
Sbjct: 548 TSSSTAERIARKMIELAPDYHMSYVLLANVYRAVGRWSDALKVRKLMKDRGVKKITGKSW 607

BLAST of Carg19103 vs. TrEMBL
Match: tr|A0A1R3JV86|A0A1R3JV86_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_13705 PE=4 SV=1)

HSP 1 Score: 932.2 bits (2408), Expect = 6.0e-268
Identity = 449/601 (74.71%), Postives = 516/601 (85.86%), Query Frame = 0

Query: 6   KRHCRSFTSQNLKNS-THPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTN--KSILY 65
           KRHC SF S N +N   +P  K SQIL FC S  L  A+H L++LD    TT+  K +LY
Sbjct: 8   KRHCCSFASLNPQNHIENPLDKHSQILHFCRSAQLLPAIHLLSTLDIPTETTSSKKPLLY 67

Query: 66  ASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDGLF 125
           ASLLQTCTKV SF+HG + HAHV+KSGLE DRFVGNSLL+LYFKLG D R TRRVFDGLF
Sbjct: 68  ASLLQTCTKVQSFAHGLRFHAHVIKSGLETDRFVGNSLLALYFKLGHDFRETRRVFDGLF 127

Query: 126 VKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRC 185
           VKDV+SWTSM++ Y+R GKP +++E+FW+MLD G+EPNGFTLS+VIKACSE+G L LG C
Sbjct: 128 VKDVISWTSMVSGYIRAGKPESSLEMFWEMLDFGVEPNGFTLSSVIKACSELGKLRLGWC 187

Query: 186 FHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRNDL 245
           FHG+VV+ GF+SN VI S+LID YGRN   ++A QLF+E+PEPDAICWTS+ISALTRNDL
Sbjct: 188 FHGVVVKRGFDSNLVISSALIDFYGRNLQLNEACQLFEELPEPDAICWTSIISALTRNDL 247

Query: 246 YEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVES 305
           Y +AL FFY M R Y LSPDG+TFG++LTACANLGRLRQG+++HA+VI  GL GNVVVES
Sbjct: 248 YGEALNFFYSMHRNYGLSPDGYTFGTILTACANLGRLRQGKQLHARVITTGLCGNVVVES 307

Query: 306 SLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDLYS 365
           SL+DMYGKCG V +S+RVFDRMSK+NSVSW ALLGVYCQN D+E VI IFRGM+++DLY 
Sbjct: 308 SLLDMYGKCGLVIESRRVFDRMSKKNSVSWCALLGVYCQNKDYESVIRIFRGMDEVDLYC 367

Query: 366 FGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQMP 425
           FGT+IRACAGLAAV QGKEVHCQYVRKGGW++VIVESALVDLYAKCGCIDFA+RIF QM 
Sbjct: 368 FGTIIRACAGLAAVRQGKEVHCQYVRKGGWKNVIVESALVDLYAKCGCIDFAHRIFIQMS 427

Query: 426 TRNLITWNSMIRGFAQNGRSGISIEIFEEMIKEGIKPDYISFIGVLFACSHTGLVDQGRH 485
            RNLITWNSMI GFAQNGR   +++IF+EMI EGIKPDYISFIGVLFACSHTGLVDQGR 
Sbjct: 428 IRNLITWNSMIYGFAQNGRGVEALKIFDEMINEGIKPDYISFIGVLFACSHTGLVDQGRK 487

Query: 486 YFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADFRNDSSLWQVLLGACTTS 545
           YF  M +EYGIKPGIEHYNCMVDLLGRAGLLEEAENLIE+ADFRNDSSLW VLLGACTT 
Sbjct: 488 YFTSMIKEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIESADFRNDSSLWAVLLGACTTC 547

Query: 546 TNSGTAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALTIRKLMKSRQVKKVPGQSW 604
           T+S TAERIA+KM+EL P +H+SYVLLANVYRAVGRW DAL +RKLMK R VKK+ G+SW
Sbjct: 548 TSSSTAERIARKMIELAPDYHMSYVLLANVYRAVGRWSDALKVRKLMKDRGVKKITGKSW 607

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022930613.10.0e+0099.34pentatricopeptide repeat-containing protein At1g03540 [Cucurbita moschata][more]
XP_023529479.10.0e+0099.17pentatricopeptide repeat-containing protein At1g03540 [Cucurbita pepo subsp. pep... [more]
XP_022988714.10.0e+0097.84pentatricopeptide repeat-containing protein At1g03540 [Cucurbita maxima][more]
XP_022147827.10.0e+0088.89pentatricopeptide repeat-containing protein At1g03540 [Momordica charantia][more]
XP_004137012.11.1e-29281.32PREDICTED: pentatricopeptide repeat-containing protein At1g03540 [Cucumis sativu... [more]
Match NameE-valueIdentityDescription
AT1G03540.11.7e-22061.42Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT4G33170.12.8e-10636.25Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G49170.11.8e-10535.57Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G02330.15.4e-10534.06Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G02010.11.6e-10435.89Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q9LR69|PPR8_ARATH3.1e-21961.42Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana OX... [more]
sp|Q9SMZ2|PP347_ARATH5.1e-10536.25Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... [more]
sp|Q5G1T1|PP272_ARATH3.3e-10435.57Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop... [more]
sp|Q9FWA6|PP207_ARATH9.7e-10434.06Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidop... [more]
sp|Q9S7F4|PP206_ARATH2.8e-10335.89Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis th... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0K5P0|A0A0A0K5P0_CUCSA7.0e-29381.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047230 PE=4 SV=1[more]
tr|A0A1S3C0U7|A0A1S3C0U7_CUCME4.6e-27678.68pentatricopeptide repeat-containing protein At1g03540 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A2N9EWB8|A0A2N9EWB8_FAGSY2.5e-27477.42Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6833 PE=4 SV=1[more]
tr|A0A1R3J2H0|A0A1R3J2H0_COCAP7.1e-26974.71Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_08075 PE=4 ... [more]
tr|A0A1R3JV86|A0A1R3JV86_9ROSI6.0e-26874.71Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_13705 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19103-RACarg19103-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 291..358
e-value: 3.3E-7
score: 32.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 490..602
e-value: 8.5E-12
score: 47.2
coord: 182..290
e-value: 1.1E-19
score: 73.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 359..489
e-value: 9.4E-29
score: 102.7
coord: 26..181
e-value: 1.1E-22
score: 82.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 511..584
coord: 326..352
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 198..223
e-value: 0.041
score: 14.0
coord: 302..328
e-value: 0.015
score: 15.4
coord: 229..255
e-value: 4.0E-4
score: 20.4
coord: 330..358
e-value: 6.6E-6
score: 25.9
coord: 565..593
e-value: 1.2
score: 9.4
coord: 499..521
e-value: 0.0058
score: 16.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 425..471
e-value: 9.9E-9
score: 35.2
coord: 124..171
e-value: 3.3E-12
score: 46.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 427..460
e-value: 1.9E-8
score: 32.0
coord: 127..160
e-value: 9.0E-6
score: 23.5
coord: 228..262
e-value: 2.3E-4
score: 19.1
coord: 330..357
e-value: 4.5E-5
score: 21.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 226..261
score: 8.221
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 425..459
score: 13.263
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 460..495
score: 7.037
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 58..92
score: 6.752
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 562..596
score: 7.245
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 125..159
score: 12.441
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 297..327
score: 8.418
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 496..530
score: 7.18
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 262..296
score: 8.057
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 160..194
score: 6.38
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 93..124
score: 5.152
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 394..424
score: 7.936
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 195..225
score: 7.015
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 328..362
score: 10.26
NoneNo IPR availablePANTHERPTHR24015:SF328SUBFAMILY NOT NAMEDcoord: 22..603
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 22..603

The following gene(s) are paralogous to this gene:

None