CsaV3_7G004030 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTATTATTAATTTCCTCATCTCTAACATCTCAATTGAAATCAATATGGCTAAGTGTTGTTGTTGCTGTGATGAAACCACAGTGAAAAAGGGTGTGTGGACACCTGAAGAAGATCAAAAGCTTATTGATTATGTTAATAAATATGGCCATTGGAATTGGAGAAGACTTCCCAAATATGCTGGTTAGTATACTCTACTATACTCATCTTTTTCATTAATTTACTTTAACTCAACTTTGATGATCTTCATTAATTAAAGTTTATATGATCTCTTATATATGGTTGTGTTCATAAATTTAGGTCTTTTGAGATGTGGGAAGAGTTGCAGATTAAGATGGATGAATTATTTGAGACCTAATATTAGGAGAGGAGGATTTTCCTTAGAAGAAGAAGAAACTATCATCCAAATGTATGCACAAATAGGTGGCAGGTACTACCAAAAACCATTCAATTTATCCTATATATATATATAGTTTCGTTAACTTTTAGATTTATCCAAAAACTTATGTTGATGGATTATGGTAAATTTATTTTATCATGGCATCAAGTGTGAAGCACTCTTTCTCGACACTACTAAATAGTGTTTTCCTCTTCCATTCTTTCTTTTCTGTGGCTCCTTTCCATTTCTTTCTCTCTTGTTCTTCTTCAAGCAAGTGTTAATATGAACATAATTTACTAACTTACATAAAATTTATAATACTGATGTTTTTTCGTAAATTTATGTGTCTGTGTTTTTGATTGGCAGATGGTCTACAATGGCGGGAGTAATGCCAGGAAGAACAGACAACGATATAAAGAATCATTGGAATACAGTTTTAAAGAGAAGAGTGATGAAACAGCAGATCGAAAACAAGAAAATGTTAATAAAATTGGCAAACAAACAGCCGTTGCCGCCGGCCACAGCGGCCGAAACCAACCCAATTGATCATGATGTGTTTTCCAGGGAAATTGAGAGGTCAAACAATAATTCTACTCTCATTATGGATCCAACGGCTGTAGAGATCAGTGAGCAAATTGAGAGTATCGTTGAATCACCAACCGCCGGACATTATATGGACATGGAGCTGGTGGATGAGAGGCTGCCGGAGAGTTGCACCGGTGATTTTTGGACAGACCCTTTATGGATGGACAATTCTTTTGAGATGGCATTTGATAATTATCAACATCAAGGCCTTGGTGAATCCATTAATCTTTTGAATTTGGGGTTGGATCAATATCTTTTGCAAGAGGGCATATACTTGTAGAAAAAGGAAAAAAGAAAACACAATTCTTTGCTTGGGATTTTGTAGTCTTTTGGTTGTGGGTTTAGATTTAGATAGATGTATTTTAAGAGAATAAAGGGGGAATGTTTCATATGTTATTTTTTTGGTTTTCTTTGAGTCATTCCTCCATATTATTGTTGGGGACAAAAATATAGTGAACTGAAGTTGAATTTTGAAGTTTTTCAAAGATGTTTTTTGCTCATTCAGTTTCTAATGGGGTTCATCATATTTTTAATCTTTG ATGGCTAAGTGTTGTTGTTGCTGTGATGAAACCACAGTGAAAAAGGGTGTGTGGACACCTGAAGAAGATCAAAAGCTTATTGATTATGTTAATAAATATGGCCATTGGAATTGGAGAAGACTTCCCAAATATGCTGGTCTTTTGAGATGTGGGAAGAGTTGCAGATTAAGATGGATGAATTATTTGAGACCTAATATTAGGAGAGGAGGATTTTCCTTAGAAGAAGAAGAAACTATCATCCAAATGTATGCACAAATAGGTGGCAGATGGTCTACAATGGCGGGAGTAATGCCAGGAAGAACAGACAACGATATAAAGAATCATTGGAATACAGTTTTAAAGAGAAGAGTGATGAAACAGCAGATCGAAAACAAGAAAATGTTAATAAAATTGGCAAACAAACAGCCGTTGCCGCCGGCCACAGCGGCCGAAACCAACCCAATTGATCATGATGTGTTTTCCAGGGAAATTGAGAGGTCAAACAATAATTCTACTCTCATTATGGATCCAACGGCTGTAGAGATCAGTGAGCAAATTGAGAGTATCGTTGAATCACCAACCGCCGGACATTATATGGACATGGAGCTGGTGGATGAGAGGCTGCCGGAGAGTTGCACCGGTGATTTTTGGACAGACCCTTTATGGATGGACAATTCTTTTGAGATGGCATTTGATAATTATCAACATCAAGGCCTTGGTGAATCCATTAATCTTTTGAATTTGGGGTTGGATCAATATCTTTTGCAAGAGGGCATATACTTGTAG ATGGCTAAGTGTTGTTGTTGCTGTGATGAAACCACAGTGAAAAAGGGTGTGTGGACACCTGAAGAAGATCAAAAGCTTATTGATTATGTTAATAAATATGGCCATTGGAATTGGAGAAGACTTCCCAAATATGCTGGTCTTTTGAGATGTGGGAAGAGTTGCAGATTAAGATGGATGAATTATTTGAGACCTAATATTAGGAGAGGAGGATTTTCCTTAGAAGAAGAAGAAACTATCATCCAAATGTATGCACAAATAGGTGGCAGATGGTCTACAATGGCGGGAGTAATGCCAGGAAGAACAGACAACGATATAAAGAATCATTGGAATACAGTTTTAAAGAGAAGAGTGATGAAACAGCAGATCGAAAACAAGAAAATGTTAATAAAATTGGCAAACAAACAGCCGTTGCCGCCGGCCACAGCGGCCGAAACCAACCCAATTGATCATGATGTGTTTTCCAGGGAAATTGAGAGGTCAAACAATAATTCTACTCTCATTATGGATCCAACGGCTGTAGAGATCAGTGAGCAAATTGAGAGTATCGTTGAATCACCAACCGCCGGACATTATATGGACATGGAGCTGGTGGATGAGAGGCTGCCGGAGAGTTGCACCGGTGATTTTTGGACAGACCCTTTATGGATGGACAATTCTTTTGAGATGGCATTTGATAATTATCAACATCAAGGCCTTGGTGAATCCATTAATCTTTTGAATTTGGGGTTGGATCAATATCTTTTGCAAGAGGGCATATACTTGTAG MAKCCCCCDETTVKKGVWTPEEDQKLIDYVNKYGHWNWRRLPKYAGLLRCGKSCRLRWMNYLRPNIRRGGFSLEEEETIIQMYAQIGGRWSTMAGVMPGRTDNDIKNHWNTVLKRRVMKQQIENKKMLIKLANKQPLPPATAAETNPIDHDVFSREIERSNNNSTLIMDPTAVEISEQIESIVESPTAGHYMDMELVDERLPESCTGDFWTDPLWMDNSFEMAFDNYQHQGLGESINLLNLGLDQYLLQEGIYL
BLAST of CsaV3_7G004030 vs. NCBI nr
Match: XP_004144570.1 (PREDICTED: transcription factor WER-like [Cucumis sativus] >KGN43570.1 hypothetical protein Csa_7G045590 [Cucumis sativus]) HSP 1 Score: 506.9 bits (1304), Expect = 4.0e-140 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. NCBI nr
Match: XP_008455366.1 (PREDICTED: transcription factor WER-like [Cucumis melo]) HSP 1 Score: 453.8 bits (1166), Expect = 4.0e-124 Identity = 233/254 (91.73%), Postives = 242/254 (95.28%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. NCBI nr
Match: XP_022988914.1 (transcription factor MYB4-like [Cucurbita maxima]) HSP 1 Score: 285.8 bits (730), Expect = 1.4e-73 Identity = 155/260 (59.62%), Postives = 189/260 (72.69%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. NCBI nr
Match: XP_022930883.1 (transcription factor MYB8-like [Cucurbita moschata]) HSP 1 Score: 280.8 bits (717), Expect = 4.6e-72 Identity = 150/253 (59.29%), Postives = 186/253 (73.52%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. NCBI nr
Match: XP_023531403.1 (transcription factor MYB14-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 276.2 bits (705), Expect = 1.1e-70 Identity = 149/255 (58.43%), Postives = 183/255 (71.76%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. TAIR10
Match: AT4G05100.1 (myb domain protein 74) HSP 1 Score: 166.0 bits (419), Expect = 3.0e-41 Identity = 71/108 (65.74%), Postives = 91/108 (84.26%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. TAIR10
Match: AT2G31180.1 (myb domain protein 14) HSP 1 Score: 160.2 bits (404), Expect = 1.7e-39 Identity = 68/104 (65.38%), Postives = 87/104 (83.65%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. TAIR10
Match: AT4G21440.1 (MYB-like 102) HSP 1 Score: 160.2 bits (404), Expect = 1.7e-39 Identity = 67/108 (62.04%), Postives = 89/108 (82.41%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. TAIR10
Match: AT3G02940.1 (myb domain protein 107) HSP 1 Score: 159.8 bits (403), Expect = 2.2e-39 Identity = 65/108 (60.19%), Postives = 92/108 (85.19%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. TAIR10
Match: AT4G28110.1 (myb domain protein 41) HSP 1 Score: 159.8 bits (403), Expect = 2.2e-39 Identity = 69/108 (63.89%), Postives = 88/108 (81.48%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. Swiss-Prot
Match: sp|Q9M0Y5|MYB74_ARATH (Transcription factor MYB74 OS=Arabidopsis thaliana OX=3702 GN=MYB74 PE=2 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 5.4e-40 Identity = 71/108 (65.74%), Postives = 91/108 (84.26%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. Swiss-Prot
Match: sp|Q9LDR8|MY102_ARATH (Transcription factor MYB102 OS=Arabidopsis thaliana OX=3702 GN=MYB102 PE=2 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 3.0e-38 Identity = 67/108 (62.04%), Postives = 89/108 (82.41%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. Swiss-Prot
Match: sp|Q9SJX8|MYB14_ARATH (Transcription factor MYB14 OS=Arabidopsis thaliana OX=3702 GN=MYB14 PE=2 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 3.0e-38 Identity = 68/104 (65.38%), Postives = 87/104 (83.65%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. Swiss-Prot
Match: sp|Q9M0J5|MYB41_ARATH (Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB41 PE=1 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 3.9e-38 Identity = 69/108 (63.89%), Postives = 88/108 (81.48%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. Swiss-Prot
Match: sp|Q9LXF1|MYB16_ARATH (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.1e-37 Identity = 72/122 (59.02%), Postives = 96/122 (78.69%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. TrEMBL
Match: tr|A0A0A0K1Q0|A0A0A0K1Q0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045590 PE=4 SV=1) HSP 1 Score: 506.9 bits (1304), Expect = 2.6e-140 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. TrEMBL
Match: tr|A0A1S3C0W1|A0A1S3C0W1_CUCME (transcription factor WER-like OS=Cucumis melo OX=3656 GN=LOC103495552 PE=4 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 2.6e-124 Identity = 233/254 (91.73%), Postives = 242/254 (95.28%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. TrEMBL
Match: tr|A0A2H5Q7V6|A0A2H5Q7V6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_204150 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 9.3e-45 Identity = 96/222 (43.24%), Postives = 142/222 (63.96%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. TrEMBL
Match: tr|A0A151SVG1|A0A151SVG1_CAJCA (Myb-related protein Myb4 OS=Cajanus cajan OX=3821 GN=KK1_014179 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.2e-44 Identity = 93/205 (45.37%), Postives = 125/205 (60.98%), Query Frame = 0
BLAST of CsaV3_7G004030 vs. TrEMBL
Match: tr|A0A067EX86|A0A067EX86_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g024860mg PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.6e-44 Identity = 96/222 (43.24%), Postives = 142/222 (63.96%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |