CsaV3_7G002960 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGCCTATAAATACCTCTATAAGAATGCAAATCTTTCTCATCCCTCTCTCCCAAAATCAATCTCTTACTATACACACAAATATGAGTTCCAAAGCCTTTGTTTTTCTCGGCCTTCTTCTCGCCTTTGTTCTTCTCCTATCGTCTGAGGTGGCCGCAAGAGACCTTGCGGAGACCTCCTCCAAGACGGACAACGGTGAGTTCTATGTTATAATAAATTTTTTAAGTTATTCAAAAAGTTTTAATTCATGGTAGTCACCTATTTAGAGTTTAATATTCTTTGTCCTTGTTCCTGATAATGATTACAGAGCTAACCAAGTTGTTCAGTTTACTTAGTTTAGAGGCAAATAAGCTAACCTGAATTGAATGTTCACAAATATTAAAAAAATACTCATGTAAAATGTATAAAATATACATACTCATTATTAAACTTTTTTACATACAGATTTTGAATTTATATAACATTTTCATAAAGTTATGGATTAATTTTAAAGATAACATTGCAGAGGCCACGGTGGAAACCAATGGCGTAGAGGATGCCAAGTATGGAAGAGGAGGGTATGACAGAGGCTATGGCGGAGGGCACGACAGAGGCTATGGCGGTGGTCGTGGTGGGTATGGTCGTGGTCATTACGGTGGCCGTGGAGGCTATGGTGGTGGCCGTGGTGGCTACGGCAGAGGTTGCCGATATGGTCGATGTGGGCACAAGTGCTGCAGCTACGCTGGTGAAGTGGTAGAGGGTGCAAAACCCTAAGAGAAGGTGTAGAATGGGATGAAATAATAAAAAGGTTTAAAGTTTGTGTGTTTGGTTAAATGTGTGAACGGTAGAAGTTTGAGAAATAAATAGATGGGGAATGGAAGGAGTGGGTTCTGTAGTTTTTCTTTTCCCCATGTTTGGGTTTGTTTTAGTATGTTATTTCAAACATTTGCTTTTGCAAATTTTAATTTTATAATATCACCAAACATATTTTCATTTCCTGTAATTAACGCTTTTATTTCCATAACTTGAACATAAATTTTAATAGTTAACGTATATGTTGATATTTTTGTCAACAACACCAAT ATGCAAATCTTTCTCATCCCTCTCTCCCAAAATCAATCTCTTACTATACACACAAATATGAGTTCCAAAGCCTTTGTTTTTCTCGGCCTTCTTCTCGCCTTTGTTCTTCTCCTATCGTCTGAGGTGGCCGCAAGAGACCTTGCGGAGACCTCCTCCAAGACGGACAACGAGGCCACGGTGGAAACCAATGGCGTAGAGGATGCCAAGTATGGAAGAGGAGGGTATGACAGAGGCTATGGCGGAGGGCACGACAGAGGCTATGGCGGTGGTCGTGGTGGGTATGGTCGTGGTCATTACGGTGGCCGTGGAGGCTATGGTGGTGGCCGTGGTGGCTACGGCAGAGGTTGCCGATATGGTCGATGTGGGCACAAGTGCTGCAGCTACGCTGGTGAAGTGGTAGAGGGTGCAAAACCCTAA ATGCAAATCTTTCTCATCCCTCTCTCCCAAAATCAATCTCTTACTATACACACAAATATGAGTTCCAAAGCCTTTGTTTTTCTCGGCCTTCTTCTCGCCTTTGTTCTTCTCCTATCGTCTGAGGTGGCCGCAAGAGACCTTGCGGAGACCTCCTCCAAGACGGACAACGAGGCCACGGTGGAAACCAATGGCGTAGAGGATGCCAAGTATGGAAGAGGAGGGTATGACAGAGGCTATGGCGGAGGGCACGACAGAGGCTATGGCGGTGGTCGTGGTGGGTATGGTCGTGGTCATTACGGTGGCCGTGGAGGCTATGGTGGTGGCCGTGGTGGCTACGGCAGAGGTTGCCGATATGGTCGATGTGGGCACAAGTGCTGCAGCTACGCTGGTGAAGTGGTAGAGGGTGCAAAACCCTAA MQIFLIPLSQNQSLTIHTNMSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKTDNEATVETNGVEDAKYGRGGYDRGYGGGHDRGYGGGRGGYGRGHYGGRGGYGGGRGGYGRGCRYGRCGHKCCSYAGEVVEGAKP
BLAST of CsaV3_7G002960 vs. NCBI nr
Match: KGN43456.1 (hypothetical protein Csa_7G037600 [Cucumis sativus]) HSP 1 Score: 164.5 bits (415), Expect = 2.6e-37 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of CsaV3_7G002960 vs. NCBI nr
Match: NP_001267708.1 (glycine-rich protein-like precursor [Cucumis sativus] >BAF37542.1 cell wall glycine-rich protein [Cucumis sativus]) HSP 1 Score: 128.6 bits (322), Expect = 1.6e-26 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of CsaV3_7G002960 vs. NCBI nr
Match: CEG62450.1 (Glycine rich protein [Cucumis sativus]) HSP 1 Score: 127.1 bits (318), Expect = 4.7e-26 Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0
BLAST of CsaV3_7G002960 vs. NCBI nr
Match: XP_022952571.1 (glycine-rich protein-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 112.1 bits (279), Expect = 1.6e-21 Identity = 105/138 (76.09%), Postives = 112/138 (81.16%), Query Frame = 0
BLAST of CsaV3_7G002960 vs. NCBI nr
Match: XP_022952570.1 (cold and drought-regulated protein CORA-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 111.3 bits (277), Expect = 2.6e-21 Identity = 114/140 (81.43%), Postives = 121/140 (86.43%), Query Frame = 0
BLAST of CsaV3_7G002960 vs. Swiss-Prot
Match: sp|Q09134|GRPA_MEDSF (Abscisic acid and environmental stress-inducible protein OS=Medicago sativa subsp. falcata OX=3878 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 4.5e-04 Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 0
BLAST of CsaV3_7G002960 vs. Swiss-Prot
Match: sp|P11898|GRP1_OXYRB (Glycine-rich protein HC1 OS=Oxybasis rubra OX=3560 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 5.8e-04 Identity = 23/36 (63.89%), Postives = 31/36 (86.11%), Query Frame = 0
BLAST of CsaV3_7G002960 vs. Swiss-Prot
Match: sp|P37703|GRP9_DAUCA (Glycine-rich protein DC9.1 OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 5.8e-04 Identity = 23/36 (63.89%), Postives = 31/36 (86.11%), Query Frame = 0
BLAST of CsaV3_7G002960 vs. TrEMBL
Match: tr|A0A0A0K6L7|A0A0A0K6L7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037600 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.7e-37 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of CsaV3_7G002960 vs. TrEMBL
Match: tr|A0P8W6|A0P8W6_CUCSA (Cell wall glycine-rich protein OS=Cucumis sativus OX=3659 GN=CsGRP1 PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.1e-26 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of CsaV3_7G002960 vs. TrEMBL
Match: tr|A0A0A1IXP4|A0A0A1IXP4_CUCSA (Glycine rich protein OS=Cucumis sativus OX=3659 GN=GRP PE=2 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.1e-26 Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0
BLAST of CsaV3_7G002960 vs. TrEMBL
Match: tr|A0A0A0K1B1|A0A0A0K1B1_CUCSA (Cell wall glycine-rich protein OS=Cucumis sativus OX=3659 GN=Csa_7G037590 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.0e-21 Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 0
BLAST of CsaV3_7G002960 vs. TrEMBL
Match: tr|A0A1S3C180|A0A1S3C180_CUCME (cold and drought-regulated protein CORA-like OS=Cucumis melo OX=3656 GN=LOC103495657 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19 Identity = 110/119 (92.44%), Postives = 110/119 (92.44%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |