CsaV3_7G000960 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G000960
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUbiquitin-conjugating enzyme, E2
Locationchr7 : 896518 .. 898026 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCTGCATCGGTTCTACCCTCTCCTTTTTTTTGGCCATTATATAGAGGATTTCCATCCCATTGCCTTGTGCAACAAACCAAGTACTATTTTTCTTGTTGATCTTGTTTCAATCTTCTCTTCTTCTTTCTAATTTTTCTTAGTAGAATCAAAAGCTTAGAGGTTGCAAAAATGGCTTCCAAGAGAATATTGAAGGAGCTCAAAGACTTGCAGAGAGACCCACCAACTTCTTGCAGTGCAGGTGATCAGTTGATGCAACTTTGACTCCGTTTGATGATGTTTTCTATGTCTGTAGTTCCCTTTTTCTTGTTTTCAGTTTTTGACAAATATGAGCCCTTTAATTTGGTAATACAGATTCTTTCACTTTAGATCTTGTTTTGATAACTATTTTGTTTTTTTATTTTTGAAAAAACGTACACAGGTCTTTTTTTCTTTTTTGAGTTTAACGATGAAAATCAAACCATCTACCTTGATATAGTACTGGATGAGAGGGACCAAGAATTGATCACCCGTTTAATCTTTTCCTTCTTTAACTCTGGGGAAATCTTCTGTACAAATCAAATGTAAGTTTGTGTTATATAATGGTGCATTTCTTCAGGTCCTGTTGCAGAGGATATGTTCCATTGGCAAGCAACCATTATTGGTCCTAGTGATAGTCCCTATTCTGGTGGAGTTTTTCTTGTTACCATTCATTTTCCTCCTGATTATCCTTTCAAACCTCCTAAGGTAAGCCATGCTATGCCTTTTCACTTTCAACGCCAAAATTCTTGATGAGTTAAATTTTGATTAAGTTGAGAAATTATTGGTCTTTATTATTAGAACCCATTTAGATTCACTATCGAAAAAACAAGTATTCCAAAATGACAGTTTTTTTTAAATTCTTTTGATAAAAATGTGTTTCAAAAGCTATTTTTAAATCACCAAACACATTTCGGTTTAGAAATGACTTGTTTTCGAAATTAAACACCTAAAAGAGTTAACTAATTACACTCTTAATTCCAGGTTGCTTTTAGGACAAAGGTGTTTCATCCTAACATAAACAGTAATGGCAACATATGCTTGGATATCCTCAAGGAACAATGGAGTCCTGCCCTCACAATTTCAAAGGTAACATTATATGTCATAAAAATTGTGAACTCTCTCTATCTTTTCTTTTCCATATGAGATTTTCAATATGTCAACTCAAGTGGTGTGTTATTTTGGGTTCATCATTCTTGGGTCGAGTCCTAAGTTTTTTAGGCCTTCCATCCTTCATCTCGAATGTTGCAGGTGGAATTCTCTAACAAATTTTTAGTTTTCAACTTCAACCCAACAAAACCATGTTTATTTTAATTAATTAATAAAAATTTGGTTTTGGTTTGTGTAGGTTTTGCTCTCAATATGCTCTCTATTAACTGACCCAAACCCAGATGATCCATTGGTTCCTGAGATTGCTCATATGTGCAAGACTGACAAACTCAAATATGAATCCACTGCTAGGAGCTGGACCCATAAATATGCCATGGGTTAA

mRNA sequence

ATGGCTTCCAAGAGAATATTGAAGGAGCTCAAAGACTTGCAGAGAGACCCACCAACTTCTTGCAGTGCAGGTCCTGTTGCAGAGGATATGTTCCATTGGCAAGCAACCATTATTGGTCCTAGTGATAGTCCCTATTCTGGTGGAGTTTTTCTTGTTACCATTCATTTTCCTCCTGATTATCCTTTCAAACCTCCTAAGGTTGCTTTTAGGACAAAGGTGTTTCATCCTAACATAAACAGTAATGGCAACATATGCTTGGATATCCTCAAGGAACAATGGAGTCCTGCCCTCACAATTTCAAAGGTTTTGCTCTCAATATGCTCTCTATTAACTGACCCAAACCCAGATGATCCATTGGTTCCTGAGATTGCTCATATGTGCAAGACTGACAAACTCAAATATGAATCCACTGCTAGGAGCTGGACCCATAAATATGCCATGGGTTAA

Coding sequence (CDS)

ATGGCTTCCAAGAGAATATTGAAGGAGCTCAAAGACTTGCAGAGAGACCCACCAACTTCTTGCAGTGCAGGTCCTGTTGCAGAGGATATGTTCCATTGGCAAGCAACCATTATTGGTCCTAGTGATAGTCCCTATTCTGGTGGAGTTTTTCTTGTTACCATTCATTTTCCTCCTGATTATCCTTTCAAACCTCCTAAGGTTGCTTTTAGGACAAAGGTGTTTCATCCTAACATAAACAGTAATGGCAACATATGCTTGGATATCCTCAAGGAACAATGGAGTCCTGCCCTCACAATTTCAAAGGTTTTGCTCTCAATATGCTCTCTATTAACTGACCCAAACCCAGATGATCCATTGGTTCCTGAGATTGCTCATATGTGCAAGACTGACAAACTCAAATATGAATCCACTGCTAGGAGCTGGACCCATAAATATGCCATGGGTTAA

Protein sequence

MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKLKYESTARSWTHKYAMG
Homology
[Close]
BLAST of CsaV3_7G000960 vs. NCBI nr
Match: XP_004144844.1 (PREDICTED: ubiquitin-conjugating enzyme E2 28 [Cucumis sativus] >KGN43247.1 Ubiquitin carrier protein [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 5.8e-83
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHMCKTDKLKYESTARSWTHKYAMG
Sbjct: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148

[Close]
BLAST of CsaV3_7G000960 vs. NCBI nr
Match: XP_008447960.1 (PREDICTED: ubiquitin-conjugating enzyme E2 28 [Cucumis melo])

HSP 1 Score: 315.1 bits (806), Expect = 1.3e-82
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHMCKTDKL+YESTARSWTHKYAMG
Sbjct: 121 PEIAHMCKTDKLRYESTARSWTHKYAMG 148

[Close]
BLAST of CsaV3_7G000960 vs. NCBI nr
Match: XP_007201846.1 (ubiquitin-conjugating enzyme E2 28 isoform X2 [Prunus persica])

HSP 1 Score: 310.8 bits (795), Expect = 2.4e-81
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGP+DSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHMCKTDK+KYESTARSWT KYAMG
Sbjct: 121 PEIAHMCKTDKVKYESTARSWTQKYAMG 148

[Close]
BLAST of CsaV3_7G000960 vs. NCBI nr
Match: ONH92243.1 (hypothetical protein PRUPE_8G165100 [Prunus persica])

HSP 1 Score: 310.8 bits (795), Expect = 2.4e-81
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGP+DSPYSGGVFLVTIHFPPDY
Sbjct: 27  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYSGGVFLVTIHFPPDY 86

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 87  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 146

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHMCKTDK+KYESTARSWT KYAMG
Sbjct: 147 PEIAHMCKTDKVKYESTARSWTQKYAMG 174

[Close]
BLAST of CsaV3_7G000960 vs. NCBI nr
Match: XP_022136003.1 (ubiquitin-conjugating enzyme E2 10-like [Momordica charantia])

HSP 1 Score: 310.8 bits (795), Expect = 2.4e-81
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGP+DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHMCKTDKLKYESTARSWT KYAMG
Sbjct: 121 PEIAHMCKTDKLKYESTARSWTQKYAMG 148

[Close]
BLAST of CsaV3_7G000960 vs. TAIR10
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9)

HSP 1 Score: 300.8 bits (769), Expect = 4.6e-82
Identity = 141/148 (95.27%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GPSDSPYSGGVFLVTIHFPPDY
Sbjct: 31  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 91  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 150

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTDK KYESTAR+WT KYAMG
Sbjct: 151 PEIAHMYKTDKNKYESTARTWTQKYAMG 178

[Close]
BLAST of CsaV3_7G000960 vs. TAIR10
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10)

HSP 1 Score: 299.3 bits (765), Expect = 1.3e-81
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GPS+SPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTDK KYESTARSWT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]
BLAST of CsaV3_7G000960 vs. TAIR10
Match: AT5G41700.4 (ubiquitin conjugating enzyme 8)

HSP 1 Score: 289.7 bits (740), Expect = 1.1e-78
Identity = 136/149 (91.28%), Postives = 144/149 (96.64%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSC-SAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPD 60
           MASKRILKELKDLQ+DPPTSC  AGPVAEDMFHWQATI+GP++SPYSGGVFLVTIHFPPD
Sbjct: 1   MASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60

Query: 61  YPFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 120
           YPFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL
Sbjct: 61  YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 120

Query: 121 VPEIAHMCKTDKLKYESTARSWTHKYAMG 149
           VPEIAHM KTD+ KYE+TAR+WT KYAMG
Sbjct: 121 VPEIAHMYKTDRAKYEATARNWTQKYAMG 149

[Close]
BLAST of CsaV3_7G000960 vs. TAIR10
Match: AT3G08690.1 (ubiquitin-conjugating enzyme 11)

HSP 1 Score: 288.9 bits (738), Expect = 1.8e-78
Identity = 132/148 (89.19%), Postives = 144/148 (97.30%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPP++CSAGPVAEDMFHWQATI+GP +SPY+GGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKV+F+TKV+HPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTD+ KYESTARSWT KYAMG
Sbjct: 121 PEIAHMYKTDRSKYESTARSWTQKYAMG 148

[Close]
BLAST of CsaV3_7G000960 vs. TAIR10
Match: AT5G56150.1 (ubiquitin-conjugating enzyme 30)

HSP 1 Score: 282.0 bits (720), Expect = 2.2e-76
Identity = 128/148 (86.49%), Postives = 141/148 (95.27%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRI KEL+DLQRDPP SCSAGP  +DMF WQATI+GP+DSP++GGVFLVTIHFPPDY
Sbjct: 1   MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKV+HPNINSNG+ICLDILKEQWSPALT+SKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAH+ KTD++KYESTA+SWT KYAMG
Sbjct: 121 PEIAHIYKTDRVKYESTAQSWTQKYAMG 148

[Close]
BLAST of CsaV3_7G000960 vs. Swiss-Prot
Match: sp|Q94F47|UBC28_ARATH (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 6.3e-81
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GPSDSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPN+NSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTD+ KYESTARSWT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]
BLAST of CsaV3_7G000960 vs. Swiss-Prot
Match: sp|P35132|UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 8.3e-81
Identity = 141/148 (95.27%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GPSDSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTDK KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148

[Close]
BLAST of CsaV3_7G000960 vs. Swiss-Prot
Match: sp|P35133|UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 2.4e-80
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GPS+SPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTDK KYESTARSWT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]
BLAST of CsaV3_7G000960 vs. Swiss-Prot
Match: sp|P35135|UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.6e-79
Identity = 137/148 (92.57%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP+DSPY+GGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTD+ KYE+TARSWT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148

[Close]
BLAST of CsaV3_7G000960 vs. Swiss-Prot
Match: sp|P35131|UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.6e-79
Identity = 137/148 (92.57%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP++SPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTD+ KYE+TAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148

[Close]
BLAST of CsaV3_7G000960 vs. TrEMBL
Match: tr|A0A0A0K4N5|A0A0A0K4N5_CUCSA (Ubiquitin carrier protein OS=Cucumis sativus OX=3659 GN=Csa_7G011870 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 3.8e-83
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHMCKTDKLKYESTARSWTHKYAMG
Sbjct: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148

[Close]
BLAST of CsaV3_7G000960 vs. TrEMBL
Match: tr|A0A1S3BI25|A0A1S3BI25_CUCME (ubiquitin-conjugating enzyme E2 28 OS=Cucumis melo OX=3656 GN=LOC103490290 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 8.6e-83
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHMCKTDKL+YESTARSWTHKYAMG
Sbjct: 121 PEIAHMCKTDKLRYESTARSWTHKYAMG 148

[Close]
BLAST of CsaV3_7G000960 vs. TrEMBL
Match: tr|M5W8B0|M5W8B0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa012939mg PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.6e-81
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGP+DSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHMCKTDK+KYESTARSWT KYAMG
Sbjct: 121 PEIAHMCKTDKVKYESTARSWTQKYAMG 148

[Close]
BLAST of CsaV3_7G000960 vs. TrEMBL
Match: tr|A0A251MYW6|A0A251MYW6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G165100 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.6e-81
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGP+DSPYSGGVFLVTIHFPPDY
Sbjct: 27  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYSGGVFLVTIHFPPDY 86

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 87  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 146

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHMCKTDK+KYESTARSWT KYAMG
Sbjct: 147 PEIAHMCKTDKVKYESTARSWTQKYAMG 174

[Close]
BLAST of CsaV3_7G000960 vs. TrEMBL
Match: tr|A0A2P6PKX5|A0A2P6PKX5_ROSCH (Putative aminoacyltransferase, E1 ubiquitin-activating enzyme OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0251901 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 2.8e-81
Identity = 143/148 (96.62%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKEL+DLQRDPPTSCSAGPVAEDMFHWQATIIGP+DSPYSGGVF+VTIHFPPDY
Sbjct: 1   MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYSGGVFVVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHMCK+DK+KYESTARSWTHKYAMG
Sbjct: 121 PEIAHMCKSDKVKYESTARSWTHKYAMG 148

The following BLAST results are available for this feature:
BLAST of CsaV3_7G000960 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144844.15.8e-83100.00PREDICTED: ubiquitin-conjugating enzyme E2 28 [Cucumis sativus] >KGN43247.1 Ubiq... [more]
XP_008447960.11.3e-8299.32PREDICTED: ubiquitin-conjugating enzyme E2 28 [Cucumis melo][more]
XP_007201846.12.4e-8197.97ubiquitin-conjugating enzyme E2 28 isoform X2 [Prunus persica][more]
ONH92243.12.4e-8197.97hypothetical protein PRUPE_8G165100 [Prunus persica][more]
XP_022136003.12.4e-8197.97ubiquitin-conjugating enzyme E2 10-like [Momordica charantia][more]
BLAST of CsaV3_7G000960 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27960.24.6e-8295.27ubiquitin conjugating enzyme 9[more]
AT5G53300.11.3e-8194.59ubiquitin-conjugating enzyme 10[more]
AT5G41700.41.1e-7891.28ubiquitin conjugating enzyme 8[more]
AT3G08690.11.8e-7889.19ubiquitin-conjugating enzyme 11[more]
AT5G56150.12.2e-7686.49ubiquitin-conjugating enzyme 30[more]
BLAST of CsaV3_7G000960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q94F47|UBC28_ARATH6.3e-8194.59Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1... [more]
sp|P35132|UBC9_ARATH8.3e-8195.27SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1[more]
sp|P35133|UBC10_ARATH2.4e-8094.59Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1... [more]
sp|P35135|UBC4_SOLLC1.6e-7992.57Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
sp|P35131|UBC8_ARATH1.6e-7992.57Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 S... [more]
BLAST of CsaV3_7G000960 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K4N5|A0A0A0K4N5_CUCSA3.8e-83100.00Ubiquitin carrier protein OS=Cucumis sativus OX=3659 GN=Csa_7G011870 PE=3 SV=1[more]
tr|A0A1S3BI25|A0A1S3BI25_CUCME8.6e-8399.32ubiquitin-conjugating enzyme E2 28 OS=Cucumis melo OX=3656 GN=LOC103490290 PE=3 ... [more]
tr|M5W8B0|M5W8B0_PRUPE1.6e-8197.97Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa012939mg PE=3 SV=1[more]
tr|A0A251MYW6|A0A251MYW6_PRUPE1.6e-8197.97Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G165100 PE=3 SV=1[more]
tr|A0A2P6PKX5|A0A2P6PKX5_ROSCH2.8e-8196.62Putative aminoacyltransferase, E1 ubiquitin-activating enzyme OS=Rosa chinensis ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023313UBQ-conjugating_AS
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0042023 DNA endoreduplication
biological_process GO:0043248 proteasome assembly
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0051510 regulation of unidimensional cell growth
biological_process GO:0051788 response to misfolded protein
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016874 ligase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0005524 ATP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G000960.1CsaV3_7G000960.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 4..147
e-value: 1.0E-76
score: 270.8
NoneNo IPR availablePANTHERPTHR24068:SF47SUMO-CONJUGATING ENZYME UBC9-RELATEDcoord: 1..148
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 1..148
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 5..141
e-value: 2.9E-52
score: 175.9
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 4..136
score: 47.393
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 3..142
e-value: 2.65857E-71
score: 212.448
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 1..148
e-value: 3.8E-73
score: 246.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILYSSF54495UBC-likecoord: 2..147
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 74..89

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G000960CSPI07G00930Wild cucumber (PI 183967)cpicucB415
CsaV3_7G000960Cucsa.370560Cucumber (Gy14) v1cgycucB562
CsaV3_7G000960CmaCh19G007370Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G000960CmoCh11G017360Cucurbita moschata (Rifu)cmocucB0155
CsaV3_7G000960CmoCh19G007450Cucurbita moschata (Rifu)cmocucB0622
CsaV3_7G000960Cp4.1LG04g04970Cucurbita pepo (Zucchini)cpecucB0863
CsaV3_7G000960Cp4.1LG15g05910Cucurbita pepo (Zucchini)cpecucB0322
CsaV3_7G000960CsGy7G000770Cucumber (Gy14) v2cgybcucB348
CsaV3_7G000960Carg05704Silver-seed gourdcarcucB1069
CsaV3_7G000960Cla015830Watermelon (97103) v1cucwmB634
CsaV3_7G000960MELO3C013359Melon (DHL92) v3.5.1cucmeB549
CsaV3_7G000960ClCG02G004150Watermelon (Charleston Gray)cucwcgB571
CsaV3_7G000960Lsi11G011970Bottle gourd (USVL1VR-Ls)cuclsiB529
CsaV3_7G000960MELO3C013359.2Melon (DHL92) v3.6.1cucmedB537
CsaV3_7G000960Cla97C02G030950Watermelon (97103) v2cucwmbB549
CsaV3_7G000960Bhi05G001475Wax gourdcucwgoB695
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G000960Cucumber (Chinese Long) v3cuccucB098
CsaV3_7G000960Silver-seed gourdcarcucB0347
CsaV3_7G000960Silver-seed gourdcarcucB0386
CsaV3_7G000960Silver-seed gourdcarcucB0851
CsaV3_7G000960Cucumber (Gy14) v2cgybcucB093
CsaV3_7G000960Cucumber (Gy14) v1cgycucB352
CsaV3_7G000960Cucurbita maxima (Rimu)cmacucB0176
CsaV3_7G000960Cucurbita maxima (Rimu)cmacucB0687
CsaV3_7G000960Cucurbita maxima (Rimu)cmacucB0766
CsaV3_7G000960Cucurbita maxima (Rimu)cmacucB0958
CsaV3_7G000960Cucurbita moschata (Rifu)cmocucB0671
CsaV3_7G000960Cucurbita moschata (Rifu)cmocucB0753
CsaV3_7G000960Cucurbita pepo (Zucchini)cpecucB0368
CsaV3_7G000960Cucurbita pepo (Zucchini)cpecucB0952
CsaV3_7G000960Wild cucumber (PI 183967)cpicucB117
CsaV3_7G000960Bottle gourd (USVL1VR-Ls)cuclsiB523
CsaV3_7G000960Melon (DHL92) v3.5.1cucmeB533
CsaV3_7G000960Melon (DHL92) v3.6.1cucmedB520
CsaV3_7G000960Watermelon (Charleston Gray)cucwcgB565
CsaV3_7G000960Watermelon (97103) v1cucwmB628
CsaV3_7G000960Watermelon (97103) v2cucwmbB543
CsaV3_7G000960Wax gourdcucwgoB706