CmaCh19G007370 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGCCCTCTGCAATAAACCAGTGTTCTTCTTGATTTTCCTCTGTAGAATCAAAAGCTTGGAGCTTGCAACAATGGCGTCCAAGAGAATATTGAAGGAGCTTAAAGACTTGCAGAGAGACCCGCCGACTTCTTGCAGCGCAGGTGATTGATTAGGGCAACGTTTTGCTTGTTTGATAATGTTTTTGTTTTTTCGGTTTCTTCTTCGTGTAAGAAGTGTTTGATAATGGTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTAGAAAGTTGTGGAAAATTTTTTAAAATATTAATGGTTGTCGGGTTTTTGGTGTTAAAGAATTAGTGTTTCATCGTTGTTTGTTTTGTTATCGGCTTTCTATTGATGTTTTATAAAAGAATAAACGAAAAAAAATTTAGATTTAAAACGTTTCTAAATGGATTTAGAAATTAAAATTTTTGTACGTTTTTTTCTTTTTTTTGTGTTAAATAATTACGAGGTGAAGCTTAGAAGATCGAGCTGTGAGATCCCATACTGTTGGGAGGAGAATGAGATTTGTTATAAGAGTTTGAAAACCTCTCTCTAACAAACATGTTTTAAAATTGTGAGACCATGGAATGAGTAATTGGCTAAAGTGGACAATATTTGTCAATGGCCAACTTGGATTGTTATAAATGGTATCAGAGCCAAATAACGAGCGATATGCTAGCGAGGACACTGGCGCCCAAGGGGTGGATTGTGAGATCCCATATCGGTTGGAGAGGAGAACGAAACATTCCTCATAAGAGTATGGAAACCTCTTCTTAACATATGCGTTTTAAAACAGTGAGGCTGGCAACAATACGTAACGGGTCAAAGCGGACTATATATGTTAGCGATAGGGTTAGGCTGTTACAAATGGTATTAGAGCAAACGCCGAGTGACGTGCCAACGAGGATGCTGGCCTCTAAGGGGGTGGATTGTGAGATCTCATATCAGTTGGAGAGAAGAACGAAACATTCATTGTAAGAGTATGGAAACCTTTCCCTAACATACGTGTTTTAAAACAGTGAGACTAACAACAATACGTAAAAGGTCAAAGCGGACAATATCTGTTAGCGGTGGGGTTGAACTGTTACAAATGGTATCAAAACCAAACACCGAGTGACGTGCCAGCGAAAACGCTGGCTCCCAAGGGGGGTGGATTGTGAGATCCCATAACAGTTAGAGAGGAAAACAAACATTTCTTATAAGAGTATGGAAACCTCTTCCTAACATACGCATTTTAAAACTGTGAGGCTGATAACAATACATAATAGGCCAAAGCGGACAATATCTGTTAGCCGTGGGGTTGGGTTGTTATAAGGTATCAGAGCCAAACACCGGGTAACGAGTCAGCGAGGACGCTGGCCTCCAAGGGGGTAATTTGTGAGATCCCACGACGGTTGGAGAGAAAAACGAAACATTTTTTATAAGGGTATGGAAACCTCTCCCTAACAAACGCGTTTTAAAACCGTGAGGTTGACGACGACAAGTAATAAGCCAAAACTGACAATATCTAGTAACAGTGGGCTTGAGCGGTTACACGAACCGTTTATTTATTATTATTTGTGGGGTAAATTCTCTCCAAAAATAAACAAAAGCTTACGTTATGGTGCATTTTTCAGGGCCTGTGGCAGAGGATATGTTCCATTGGCAAGCAACCATTCTTGGTCCTTGTGACAGTCCCTATGCTGGTGGAGTTTTTCTTGTTACCATTCATTTTCCTCCTGATTATCCCTTCAAACCTCCTAAGGTAAGCCATTTGTAGGGCTTTCTCCTCTCGTTTAGGGTCGGGTTTGCATAACTTTTAAAAACGTCGAGTTTAAATTCGAAATTCAAACACTATTAATCGCAGGTTGCCTTTAAAACGAAGGTGTTCCATCCCAACATAAACAATAACGGTAACATTTGCTTAGACATCCTCAAGGAACAATGGAGTCCGGCCCTCACAATATCAAAGGTTTGAATCGTAAATATTATTTCATCATAATAGAACTGTTTGGATCGCACGAGTTAAAATTGGGTATTAGCTGGGACATTTTTTAGATCAACTCAACCTAATCTAACCCGATTGTTCGGTTGCAAATTTTTTTAACGCAAACAACTCATATTACCTAATGAACTCAACCCAATCCAACTCATGGGTTATTGTTCCAGACATTTATTTAAATTTTTATTTTTAATAAAAGTATTATTTATAAATGAAATAATTCTACGGTAACAAAAAAAAAAAAAATTAAAAAATTAAAATCAATTCAATTCATAAAATTTTTATTTATTTGAACTCAACCCAATTCAAATAAGTTTATATCCGAACCCAACTCACGGTTTGGGTCAGGTTGATCAGCTTTTTCGAGTTATCGAATTCTTTAAAGAACCCTAATTCAAACGAATGATTCAAAATATTATTATATGAAATCCATTTAAAAGATCGTTAATTTTTGAACCCTTACAATTTTTCTTTTAATCTTAATTTGATTCATGTCGATACTCGAGAACGTCGAGCTTTATTCTCATTTATCTATTTATTTATTTTTGGTTGTAGGTTTTGCTCTCAATTTGCTCACTATTGACTGACCCAAACCCTGATGATCCACTGGTTCCTGAGATTGCTCATATGTGCAAGTCTGATAAAGTCAAATATGAATCCCAAGCTAGGAGCTGGACCCACAAATATGCAATGGGTTAACCTAATATGTCACAAAACTTTGGAGCTTCATTATAATATATGAATCATTTTCTATCGTATAATTTCACTTTAATCAACGAATAATAAAACGAGGGTAACACCTTTCGGATACTAATTGTATCGAACGAAAGCATGTTAAGCCCTTCACACGAGTTAGGTTGTGGTCGACCAGACTTTAGGTGGGTTATAGTCTAATTTAGGTTTGGTTACCTACGACTAGGTCAAATAGACTCGAGTGGTTAAAACTCGATACGAGCTTAGTTTGGCTCAGGCTCGATTGATAAACCCTAAACAAACTTCATATAAATTAAAAGAAAAGACGGGCATTGTGATGTCTCATATTGGTTGGGGAGGAGAACAAACTACCATTTATAAGGGTATGGAAACCTTCCCCTAGTAGACGCGTTTTAAAGCCCGAAAGAGAAAGCCCAAGGAGAACAATATCTGCTAATCCTAATTTGAATTAGCCACCGTTTTTTACGAAAACGAAAATTGAGTCTTCCCAATTAGTGTGTTTATTTTGATTTTTCTTGTAATTTTTATTTTATATAATTAGAATTTTATTCGTATAACCTAATTCCTGGTGCATAGAAAATATCGAGCTCTATCGTTAGAGGATTAAAAAATTATTAACTATCCACCCGAGCGTAGTCTCTCCCG TTTGCCCTCTGCAATAAACCAGTGTTCTTCTTGATTTTCCTCTGTAGAATCAAAAGCTTGGAGCTTGCAACAATGGCGTCCAAGAGAATATTGAAGGAGCTTAAAGACTTGCAGAGAGACCCGCCGACTTCTTGCAGCGCAGGGCCTGTGGCAGAGGATATGTTCCATTGGCAAGCAACCATTCTTGGTCCTTGTGACAGTCCCTATGCTGGTGGAGTTTTTCTTGTTACCATTCATTTTCCTCCTGATTATCCCTTCAAACCTCCTAAGGTTGCCTTTAAAACGAAGGTGTTCCATCCCAACATAAACAATAACGGTAACATTTGCTTAGACATCCTCAAGGAACAATGGAGTCCGGCCCTCACAATATCAAAGGTTTTGCTCTCAATTTGCTCACTATTGACTGACCCAAACCCTGATGATCCACTGGTTCCTGAGATTGCTCATATGTGCAAGTCTGATAAAGTCAAATATGAATCCCAAGCTAGGAGCTGGACCCACAAATATGCAATGGGTTAACCTAATATGTCACAAAACTTTGGAGCTTCATTATAATATATGAATCATTTTCTATCGTATAATTTCACTTTAATCAACGAATAATAAAACGAGGGTAACACCTTTCGGATACTAATTGTATCGAACGAAAGCATGTTAAGCCCTTCACACGAGTTAGGTTGTGGTCGACCAGACTTTAGGTGGGTTATAGTCTAATTTAGGTTTGGTTACCTACGACTAGGTCAAATAGACTCGAGTGGTTAAAACTCGATACGAGCTTAGTTTGGCTCAGGCTCGATTGATAAACCCTAAACAAACTTCATATAAATTAAAAGAAAAGACGGGCATTGTGATGTCTCATATTGGTTGGGGAGGAGAACAAACTACCATTTATAAGGGTATGGAAACCTTCCCCTAGTAGACGCGTTTTAAAGCCCGAAAGAGAAAGCCCAAGGAGAACAATATCTGCTAATCCTAATTTGAATTAGCCACCGTTTTTTACGAAAACGAAAATTGAGTCTTCCCAATTAGTGTGTTTATTTTGATTTTTCTTGTAATTTTTATTTTATATAATTAGAATTTTATTCGTATAACCTAATTCCTGGTGCATAGAAAATATCGAGCTCTATCGTTAGAGGATTAAAAAATTATTAACTATCCACCCGAGCGTAGTCTCTCCCG ATGGCGTCCAAGAGAATATTGAAGGAGCTTAAAGACTTGCAGAGAGACCCGCCGACTTCTTGCAGCGCAGGGCCTGTGGCAGAGGATATGTTCCATTGGCAAGCAACCATTCTTGGTCCTTGTGACAGTCCCTATGCTGGTGGAGTTTTTCTTGTTACCATTCATTTTCCTCCTGATTATCCCTTCAAACCTCCTAAGGTTGCCTTTAAAACGAAGGTGTTCCATCCCAACATAAACAATAACGGTAACATTTGCTTAGACATCCTCAAGGAACAATGGAGTCCGGCCCTCACAATATCAAAGGTTTTGCTCTCAATTTGCTCACTATTGACTGACCCAAACCCTGATGATCCACTGGTTCCTGAGATTGCTCATATGTGCAAGTCTGATAAAGTCAAATATGAATCCCAAGCTAGGAGCTGGACCCACAAATATGCAATGGGTTAA MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDYPFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKSDKVKYESQARSWTHKYAMG
BLAST of CmaCh19G007370 vs. Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 4.9e-78 Identity = 136/148 (91.89%), Postives = 143/148 (96.62%), Query Frame = 1
BLAST of CmaCh19G007370 vs. Swiss-Prot
Match: UBC28_ARATH (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 4.9e-78 Identity = 134/148 (90.54%), Postives = 143/148 (96.62%), Query Frame = 1
BLAST of CmaCh19G007370 vs. Swiss-Prot
Match: UBC5B_ORYSJ (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica GN=UBC5B PE=2 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 6.4e-78 Identity = 135/148 (91.22%), Postives = 142/148 (95.95%), Query Frame = 1
BLAST of CmaCh19G007370 vs. Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 8.4e-78 Identity = 135/148 (91.22%), Postives = 143/148 (96.62%), Query Frame = 1
BLAST of CmaCh19G007370 vs. Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 1.1e-77 Identity = 134/148 (90.54%), Postives = 143/148 (96.62%), Query Frame = 1
BLAST of CmaCh19G007370 vs. TrEMBL
Match: A0A0A0K4N5_CUCSA (Ubiquitin carrier protein OS=Cucumis sativus GN=Csa_7G011870 PE=3 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 1.1e-79 Identity = 140/148 (94.59%), Postives = 146/148 (98.65%), Query Frame = 1
BLAST of CmaCh19G007370 vs. TrEMBL
Match: B9H199_POPTR (Ubiquitin conjugating-like enzyme family protein OS=Populus trichocarpa GN=POPTR_0004s18090g PE=3 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 3.1e-79 Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 1
BLAST of CmaCh19G007370 vs. TrEMBL
Match: A0A067K0A8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18818 PE=3 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 6.9e-79 Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 1
BLAST of CmaCh19G007370 vs. TrEMBL
Match: M5W8B0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012939mg PE=3 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 6.9e-79 Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 1
BLAST of CmaCh19G007370 vs. TrEMBL
Match: I1LPS4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G032800 PE=3 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 9.0e-79 Identity = 140/148 (94.59%), Postives = 144/148 (97.30%), Query Frame = 1
BLAST of CmaCh19G007370 vs. TAIR10
Match: AT5G53300.1 (AT5G53300.1 ubiquitin-conjugating enzyme 10) HSP 1 Score: 291.6 bits (745), Expect = 2.8e-79 Identity = 136/148 (91.89%), Postives = 143/148 (96.62%), Query Frame = 1
BLAST of CmaCh19G007370 vs. TAIR10
Match: AT4G27960.2 (AT4G27960.2 ubiquitin conjugating enzyme 9) HSP 1 Score: 290.8 bits (743), Expect = 4.7e-79 Identity = 135/148 (91.22%), Postives = 143/148 (96.62%), Query Frame = 1
BLAST of CmaCh19G007370 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11) HSP 1 Score: 284.6 bits (727), Expect = 3.4e-77 Identity = 131/148 (88.51%), Postives = 143/148 (96.62%), Query Frame = 1
BLAST of CmaCh19G007370 vs. TAIR10
Match: AT5G41700.4 (AT5G41700.4 ubiquitin conjugating enzyme 8) HSP 1 Score: 281.6 bits (719), Expect = 2.9e-76 Identity = 131/149 (87.92%), Postives = 142/149 (95.30%), Query Frame = 1
BLAST of CmaCh19G007370 vs. TAIR10
Match: AT5G56150.1 (AT5G56150.1 ubiquitin-conjugating enzyme 30) HSP 1 Score: 276.9 bits (707), Expect = 7.0e-75 Identity = 126/148 (85.14%), Postives = 139/148 (93.92%), Query Frame = 1
BLAST of CmaCh19G007370 vs. NCBI nr
Match: gi|449454201|ref|XP_004144844.1| (PREDICTED: ubiquitin-conjugating enzyme E2 28 [Cucumis sativus]) HSP 1 Score: 303.9 bits (777), Expect = 1.5e-79 Identity = 140/148 (94.59%), Postives = 146/148 (98.65%), Query Frame = 1
BLAST of CmaCh19G007370 vs. NCBI nr
Match: gi|659094248|ref|XP_008447960.1| (PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Cucumis melo]) HSP 1 Score: 302.8 bits (774), Expect = 3.4e-79 Identity = 139/148 (93.92%), Postives = 146/148 (98.65%), Query Frame = 1
BLAST of CmaCh19G007370 vs. NCBI nr
Match: gi|224078309|ref|XP_002305519.1| (ubiquitin conjugating-like enzyme family protein [Populus trichocarpa]) HSP 1 Score: 302.4 bits (773), Expect = 4.4e-79 Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 1
BLAST of CmaCh19G007370 vs. NCBI nr
Match: gi|720032017|ref|XP_010265989.1| (PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Nelumbo nucifera]) HSP 1 Score: 302.4 bits (773), Expect = 4.4e-79 Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 1
BLAST of CmaCh19G007370 vs. NCBI nr
Match: gi|743906538|ref|XP_011046691.1| (PREDICTED: ubiquitin-conjugating enzyme E2 10-like [Populus euphratica]) HSP 1 Score: 302.0 bits (772), Expect = 5.8e-79 Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |