Cp4.1LG04g04970 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g04970
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUbiquitin-conjugating enzyme E2
LocationCp4.1LG04 : 6248479 .. 6250563 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCCAATTATCGTCGTCTGACCAAAATGTTCCACCGACTTCAATTCAACGAGCTCAATGAACTTAAATTAATGAAACTTGTATATAGAGGTTTGGACCAGAGTAAACATTATCATACCCACGTGAATTGGCAAAGACGACTTCCCCCTATTCACAATTGATGTAGGATCTTACAATCCACTCCCTTGGGGGCCAGCGTCCTCGCTGACACACCGTCCAGTGTCTAGCTTTAGTTATAACAGTGTGGAAATCTCTCCCTAATAAACACGTTTTAAACTTATGAGGTTGATAACAGTACGTAACGGGTCAAAGCGAATAATATCTACTAGCGGTAGAATTGGGCTTGGTCCGTTTCGGTATCAAATTCACACAAGATTCTTAATATATTAGCTTATATTATCATGTAGGGAAAGTATCTATTCTGTTCCCACTTTGAGAAGTCCAAAAGAACCTTTACCCTCCCTTTGTGGCCATTATATTAGAGCGTTTTGAGCCCTTTGCCGTGAGCAATAAACCAGTTTTCTTCTTCATCCTTGATTTTCTTCTGTACAATCAAAAGCTTAAAAGTTGCAACAATGGCGTCCAAGAGAATATTGAAGGAGCTTAAAGACTTGCAGAGAGACCCACCAACTTCTTGTAGTGCAGGTGAATTAGGGATACTTTATGATCACACCAAGTTTAATTTTTGTTTCTACTTTTCCTTTTATAACCTTTTCGTGTTAAATACTCGTAAGATTGAGCTTCGTTCATTAACGTTTGATATGGTAATCGTGAGATCCCACATCGGTTGGAGAGGGAAACGACGCATTCCTTATAAGGGCGTAGAAACCTCTCCCTAGCAGACGCGTTTTAAAACCGTGAAACTGACGACGATACGTAACGGGCCAAAGTAGACGATATCTGCTAGCGTTGGCCTCGGGCTATTACAAATGGTATCAGAGCCCGTCATTGGGTAGTGTGCCAGCGAGGATGTTGGCCCCCCAATGGGGTGTTTTGTGAGATCCCACATCGGTTGGAGAGAGGAACGAAGTATTCCTTATAAGGGTGTGGAAACCTCTCTCTAGCATACGGGTTTTAAAACTGTGAGGCTGATGACGATACGTAATGAGCCAAAGCAGACAATATCTGAATACAAGTTTAGCTCTGTTCCATAATTATCTTGTTCTTGATTTTCCGCGATTTCTTTACAACCACTTTTATTTTTTAAGGAAAATTTCGAATATCTAAGGATGTTCACGACTCGATGAACTTATTAGGGTTCGATTAGTTCAAATAAATGAAAACTTTATGGGTTAGGTTGGTTCATGGATTTGAGTTTATACTCGTGTATTTTTCAGGTCCTGTGGCTGAGGACATGTTTCATTGGCAAGCAACTATTATCGGTCCAAATGACAGTCCCTATGCCGGTGGAGTTTTTCTCGTCTCCATTCATTTTCCTCCCGATTATCCTTTCAAGCCTCCTAAGGTTGCCTTTAGAACACGAGTGTTTCATCCAAACATAAACAGCAACGGCAACATATGCTTGGATATCCTCAAGGAACAATGGAGTCCCGCACTAACGATATCAAAAGTAAGTTCATTTCAACTTTAAATCTTCATACCCGTAAACAAATAAAAAATCGATCAAAACCCGTTTAGTTTAAGAGTTTCATGAGTCCACTTGTCGACCAGATGAACGCGTTAACAATTTGATTCGTATCGATACTCAAGAACGAAGGTTGAGTATACTAAAGATCTCGAATTTTGCAGGTTTTGCTATCAATATGCTCACTATTAACCGATCCAAACCCAGATGATCCACTGGTTCCAGAGATTGCTCACATGTGCAAGACTGATAAAGTCAAATATGAATCCACTGCTAGGAGCTGGACCCACAAATATGCAATGGGTTAAATATTTATACATTGATTCGAATTTCTGACCTCTGAACTCTGTGTTTGTATTTGTTCCGTACTTTAATGATAATTATTATTGACATCATAAATATTCTAAATAACAAAAAGAAAAAAAAAATGATTTTAAATTTTTTGTTTTTATTGGAATGTGTACAAACTTGTATAAATGGTTCCGTAAATCTCATAGAAAT

mRNA sequence

TCCCAATTATCGTCGTCTGACCAAAATGTTCCACCGACTTCAATTCAACGAGCTCAATGAACTTAAATTAATGAAACTTGTATATAGAGGTTTGGACCAGAGTAAACATTATCATACCCACGTGAATTGGCAAAGACGACTTCCCCCTATTCACAATTGATGTAGGATCTTACAATCCACTCCCTTGGGGGCCAGCGTCCTCGCTGACACACCGTCCAGTGTCTAGCTTTAGTTATAACAGTGTGGAAATCTCTCCCTAATAAACACGTTTTAAACTTATGAGGTTGATAACAGTACGTAACGGGTCAAAGCGAATAATATCTACTAGCGGTAGAATTGGGCTTGGTCCGTTTCGGTATCAAATTCACACAAGATTCTTAATATATTAGCTTATATTATCATGTAGGGAAAGTATCTATTCTGTTCCCACTTTGAGAAGTCCAAAAGAACCTTTACCCTCCCTTTGTGGCCATTATATTAGAGCGTTTTGAGCCCTTTGCCGTGAGCAATAAACCAGTTTTCTTCTTCATCCTTGATTTTCTTCTGTACAATCAAAAGCTTAAAAGTTGCAACAATGGCGTCCAAGAGAATATTGAAGGAGCTTAAAGACTTGCAGAGAGACCCACCAACTTCTTGTAGTGCAGCAACTATTATCGGTCCAAATGACAGTCCCTATGCCGGTGGAGTTTTTCTCGTCTCCATTCATTTTCCTCCCGATTATCCTTTCAAGCCTCCTAAGGTTGCCTTTAGAACACGAGTGTTTCATCCAAACATAAACAGCAACGGCAACATATGCTTGGATATCCTCAAGGAACAATGGAGTCCCGCACTAACGATATCAAAAGTTTTGCTATCAATATGCTCACTATTAACCGATCCAAACCCAGATGATCCACTGGTTCCAGAGATTGCTCACATGTGCAAGACTGATAAAGTCAAATATGAATCCACTGCTAGGAGCTGGACCCACAAATATGCAATGGGTTAAATATTTATACATTGATTCGAATTTCTGACCTCTGAACTCTGTGTTTGTATTTGTTCCGTACTTTAATGATAATTATTATTGACATCATAAATATTCTAAATAACAAAAAGAAAAAAAAAATGATTTTAAATTTTTTGTTTTTATTGGAATGTGTACAAACTTGTATAAATGGTTCCGTAAATCTCATAGAAAT

Coding sequence (CDS)

ATGGCGTCCAAGAGAATATTGAAGGAGCTTAAAGACTTGCAGAGAGACCCACCAACTTCTTGTAGTGCAGCAACTATTATCGGTCCAAATGACAGTCCCTATGCCGGTGGAGTTTTTCTCGTCTCCATTCATTTTCCTCCCGATTATCCTTTCAAGCCTCCTAAGGTTGCCTTTAGAACACGAGTGTTTCATCCAAACATAAACAGCAACGGCAACATATGCTTGGATATCCTCAAGGAACAATGGAGTCCCGCACTAACGATATCAAAAGTTTTGCTATCAATATGCTCACTATTAACCGATCCAAACCCAGATGATCCACTGGTTCCAGAGATTGCTCACATGTGCAAGACTGATAAAGTCAAATATGAATCCACTGCTAGGAGCTGGACCCACAAATATGCAATGGGTTAA

Protein sequence

MASKRILKELKDLQRDPPTSCSAATIIGPNDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKVKYESTARSWTHKYAMG
Homology
[Close]
BLAST of Cp4.1LG04g04970 vs. Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 5.0e-69
Identity = 127/148 (85.81%), Postives = 133/148 (89.86%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSA           ATI+GP DSPYAGGVFLVSIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHM KTD+ KYE+TARSWT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148

[Close]
BLAST of Cp4.1LG04g04970 vs. Swiss-Prot
Match: UBC28_ARATH (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.1e-68
Identity = 125/148 (84.46%), Postives = 134/148 (90.54%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSA           ATI+GP+DSPY+GGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPN+NSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHM KTD+ KYESTARSWT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]
BLAST of Cp4.1LG04g04970 vs. Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.1e-68
Identity = 127/148 (85.81%), Postives = 134/148 (90.54%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSA           ATI+GP++SPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHM KTDK KYESTARSWT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]
BLAST of Cp4.1LG04g04970 vs. Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.9e-68
Identity = 126/148 (85.14%), Postives = 134/148 (90.54%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSA           ATI+GP+DSPY+GGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHM KTDK KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148

[Close]
BLAST of Cp4.1LG04g04970 vs. Swiss-Prot
Match: UBC5B_ORYSJ (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica GN=UBC5B PE=2 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 7.3e-68
Identity = 124/148 (83.78%), Postives = 133/148 (89.86%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSA           AT++GP+DSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVA +T+VFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHM KTD+ KYESTARSWT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]
BLAST of Cp4.1LG04g04970 vs. TrEMBL
Match: A0A0B2QV65_GLYSO (Ubiquitin-conjugating enzyme E2 10 OS=Glycine soja GN=glysoja_010387 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 4.9e-71
Identity = 134/148 (90.54%), Postives = 136/148 (91.89%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSA           ATIIGPNDSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVGEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHMCKTDKVKYESTARSWT KYAMG
Sbjct: 121 PEIAHMCKTDKVKYESTARSWTQKYAMG 148

[Close]
BLAST of Cp4.1LG04g04970 vs. TrEMBL
Match: I1LPS4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G032800 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 4.9e-71
Identity = 134/148 (90.54%), Postives = 136/148 (91.89%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSA           ATIIGPNDSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVGEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHMCKTDKVKYESTARSWT KYAMG
Sbjct: 121 PEIAHMCKTDKVKYESTARSWTQKYAMG 148

[Close]
BLAST of Cp4.1LG04g04970 vs. TrEMBL
Match: M5W8B0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012939mg PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-70
Identity = 133/148 (89.86%), Postives = 136/148 (91.89%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSA           ATIIGPNDSPY+GGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHMCKTDKVKYESTARSWT KYAMG
Sbjct: 121 PEIAHMCKTDKVKYESTARSWTQKYAMG 148

[Close]
BLAST of Cp4.1LG04g04970 vs. TrEMBL
Match: A0A067K0A8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18818 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-70
Identity = 133/148 (89.86%), Postives = 136/148 (91.89%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSA           ATIIGPNDSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHMCKTDKVKY+STARSWT KYAMG
Sbjct: 121 PEIAHMCKTDKVKYDSTARSWTQKYAMG 148

[Close]
BLAST of Cp4.1LG04g04970 vs. TrEMBL
Match: A0A0A0K4N5_CUCSA (Ubiquitin carrier protein OS=Cucumis sativus GN=Csa_7G011870 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-70
Identity = 132/148 (89.19%), Postives = 137/148 (92.57%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSA           ATIIGP+DSPY+GGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHMCKTDK+KYESTARSWTHKYAMG
Sbjct: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148

[Close]
BLAST of Cp4.1LG04g04970 vs. TAIR10
Match: AT5G53300.1 (AT5G53300.1 ubiquitin-conjugating enzyme 10)

HSP 1 Score: 260.4 bits (664), Expect = 6.3e-70
Identity = 127/148 (85.81%), Postives = 134/148 (90.54%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSA           ATI+GP++SPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHM KTDK KYESTARSWT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]
BLAST of Cp4.1LG04g04970 vs. TAIR10
Match: AT4G27960.2 (AT4G27960.2 ubiquitin conjugating enzyme 9)

HSP 1 Score: 259.6 bits (662), Expect = 1.1e-69
Identity = 126/148 (85.14%), Postives = 134/148 (90.54%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSA           ATI+GP+DSPY+GGVFLV+IHFPPDY
Sbjct: 31  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 91  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 150

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHM KTDK KYESTAR+WT KYAMG
Sbjct: 151 PEIAHMYKTDKNKYESTARTWTQKYAMG 178

[Close]
BLAST of Cp4.1LG04g04970 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11)

HSP 1 Score: 253.4 bits (646), Expect = 7.7e-68
Identity = 122/148 (82.43%), Postives = 133/148 (89.86%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQ+DPP++CSA           ATI+GP +SPYAGGVFLVSIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKV+F+T+V+HPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHM KTD+ KYESTARSWT KYAMG
Sbjct: 121 PEIAHMYKTDRSKYESTARSWTQKYAMG 148

[Close]
BLAST of Cp4.1LG04g04970 vs. TAIR10
Match: AT5G56150.1 (AT5G56150.1 ubiquitin-conjugating enzyme 30)

HSP 1 Score: 251.5 bits (641), Expect = 2.9e-67
Identity = 121/148 (81.76%), Postives = 132/148 (89.19%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRI KEL+DLQRDPP SCSA           ATI+GP DSP+AGGVFLV+IHFPPDY
Sbjct: 1   MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+V+HPNINSNG+ICLDILKEQWSPALT+SKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAH+ KTD+VKYESTA+SWT KYAMG
Sbjct: 121 PEIAHIYKTDRVKYESTAQSWTQKYAMG 148

[Close]
BLAST of Cp4.1LG04g04970 vs. TAIR10
Match: AT5G41700.4 (AT5G41700.4 ubiquitin conjugating enzyme 8)

HSP 1 Score: 251.1 bits (640), Expect = 3.8e-67
Identity = 121/149 (81.21%), Postives = 131/149 (87.92%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCS------------AATIIGPNDSPYAGGVFLVSIHFPPD 60
           MASKRILKELKDLQ+DPPTSC              ATI+GP +SPY+GGVFLV+IHFPPD
Sbjct: 1   MASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60

Query: 61  YPFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 120
           YPFKPPKVAFRT+VFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL
Sbjct: 61  YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 120

Query: 121 VPEIAHMCKTDKVKYESTARSWTHKYAMG 138
           VPEIAHM KTD+ KYE+TAR+WT KYAMG
Sbjct: 121 VPEIAHMYKTDRAKYEATARNWTQKYAMG 149

[Close]
BLAST of Cp4.1LG04g04970 vs. NCBI nr
Match: gi|356544896|ref|XP_003540883.1| (PREDICTED: ubiquitin-conjugating enzyme E2 28 [Glycine max])

HSP 1 Score: 275.0 bits (702), Expect = 7.0e-71
Identity = 134/148 (90.54%), Postives = 136/148 (91.89%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSA           ATIIGPNDSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVGEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHMCKTDKVKYESTARSWT KYAMG
Sbjct: 121 PEIAHMCKTDKVKYESTARSWTQKYAMG 148

[Close]
BLAST of Cp4.1LG04g04970 vs. NCBI nr
Match: gi|802674711|ref|XP_012081773.1| (PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Jatropha curcas])

HSP 1 Score: 273.9 bits (699), Expect = 1.6e-70
Identity = 133/148 (89.86%), Postives = 136/148 (91.89%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSA           ATIIGPNDSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHMCKTDKVKY+STARSWT KYAMG
Sbjct: 121 PEIAHMCKTDKVKYDSTARSWTQKYAMG 148

[Close]
BLAST of Cp4.1LG04g04970 vs. NCBI nr
Match: gi|449454201|ref|XP_004144844.1| (PREDICTED: ubiquitin-conjugating enzyme E2 28 [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 1.6e-70
Identity = 132/148 (89.19%), Postives = 137/148 (92.57%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSA           ATIIGP+DSPY+GGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHMCKTDK+KYESTARSWTHKYAMG
Sbjct: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148

[Close]
BLAST of Cp4.1LG04g04970 vs. NCBI nr
Match: gi|595801600|ref|XP_007201846.1| (hypothetical protein PRUPE_ppa012939mg [Prunus persica])

HSP 1 Score: 273.9 bits (699), Expect = 1.6e-70
Identity = 133/148 (89.86%), Postives = 136/148 (91.89%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSA           ATIIGPNDSPY+GGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHMCKTDKVKYESTARSWT KYAMG
Sbjct: 121 PEIAHMCKTDKVKYESTARSWTQKYAMG 148

[Close]
BLAST of Cp4.1LG04g04970 vs. NCBI nr
Match: gi|1012030406|ref|XP_015951884.1| (PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Arachis duranensis])

HSP 1 Score: 273.5 bits (698), Expect = 2.0e-70
Identity = 132/148 (89.19%), Postives = 136/148 (91.89%), Query Frame = 1 

Query: 1   MASKRILKELKDLQRDPPTSCSA-----------ATIIGPNDSPYAGGVFLVSIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSA           ATIIGPNDSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVGEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 138
           PEIAHMCKTD++KYESTARSWT KYAMG
Sbjct: 121 PEIAHMCKTDRIKYESTARSWTQKYAMG 148

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g04970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UBC4_SOLLC5.0e-6985.81Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1[more]
UBC28_ARATH1.1e-6884.46Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1[more]
UBC10_ARATH1.1e-6885.81Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1[more]
UBC9_ARATH1.9e-6885.14SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1[more]
UBC5B_ORYSJ7.3e-6883.78Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica GN=UBC5B PE=2... [more]
BLAST of Cp4.1LG04g04970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0B2QV65_GLYSO4.9e-7190.54Ubiquitin-conjugating enzyme E2 10 OS=Glycine soja GN=glysoja_010387 PE=3 SV=1[more]
I1LPS4_SOYBN4.9e-7190.54Uncharacterized protein OS=Glycine max GN=GLYMA_12G032800 PE=3 SV=1[more]
M5W8B0_PRUPE1.1e-7089.86Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012939mg PE=3 SV=1[more]
A0A067K0A8_JATCU1.1e-7089.86Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18818 PE=3 SV=1[more]
A0A0A0K4N5_CUCSA1.1e-7089.19Ubiquitin carrier protein OS=Cucumis sativus GN=Csa_7G011870 PE=3 SV=1[more]
BLAST of Cp4.1LG04g04970 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G53300.16.3e-7085.81 ubiquitin-conjugating enzyme 10[more]
AT4G27960.21.1e-6985.14 ubiquitin conjugating enzyme 9[more]
AT3G08690.17.7e-6882.43 ubiquitin-conjugating enzyme 11[more]
AT5G56150.12.9e-6781.76 ubiquitin-conjugating enzyme 30[more]
AT5G41700.43.8e-6781.21 ubiquitin conjugating enzyme 8[more]
BLAST of Cp4.1LG04g04970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|356544896|ref|XP_003540883.1|7.0e-7190.54PREDICTED: ubiquitin-conjugating enzyme E2 28 [Glycine max][more]
gi|802674711|ref|XP_012081773.1|1.6e-7089.86PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Jatropha curcas][more]
gi|449454201|ref|XP_004144844.1|1.6e-7089.19PREDICTED: ubiquitin-conjugating enzyme E2 28 [Cucumis sativus][more]
gi|595801600|ref|XP_007201846.1|1.6e-7089.86hypothetical protein PRUPE_ppa012939mg [Prunus persica][more]
gi|1012030406|ref|XP_015951884.1|2.0e-7089.19PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Arachis duranensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023313UBQ-conjugating_AS
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042023 DNA endoreduplication
biological_process GO:0043248 proteasome assembly
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0051510 regulation of unidimensional cell growth
biological_process GO:0051788 response to misfolded protein
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g04970.1Cp4.1LG04g04970.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 23..130
score: 9.0
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 4..125
score: 39
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 1..136
score: 5.1
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 2..136
score: 3.2
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 63..78
scor
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 1..136
score: 1.3E
NoneNo IPR availableSMARTSM00212ubc_7coord: 4..136
score: 4.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g04970MELO3C013359.2Melon (DHL92) v3.6.1cpemedB722
Cp4.1LG04g04970CsaV3_7G000960Cucumber (Chinese Long) v3cpecucB0863
Cp4.1LG04g04970Bhi05G001475Wax gourdcpewgoB0851
Cp4.1LG04g04970Carg05704Silver-seed gourdcarcpeB1421
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG04g04970Cp4.1LG15g05910Cucurbita pepo (Zucchini)cpecpeB267
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g04970Silver-seed gourdcarcpeB0439
Cp4.1LG04g04970Silver-seed gourdcarcpeB0487
Cp4.1LG04g04970Cucumber (Chinese Long) v3cpecucB0829
Cp4.1LG04g04970Wax gourdcpewgoB0866
Cp4.1LG04g04970Cucurbita pepo (Zucchini)cpecpeB244
Cp4.1LG04g04970Cucurbita pepo (Zucchini)cpecpeB304
Cp4.1LG04g04970Cucurbita pepo (Zucchini)cpecpeB495
Cp4.1LG04g04970Cucumber (Gy14) v1cgycpeB0851
Cp4.1LG04g04970Cucumber (Gy14) v1cgycpeB0982
Cp4.1LG04g04970Cucurbita maxima (Rimu)cmacpeB154
Cp4.1LG04g04970Cucurbita maxima (Rimu)cmacpeB357
Cp4.1LG04g04970Cucurbita maxima (Rimu)cmacpeB537
Cp4.1LG04g04970Cucurbita maxima (Rimu)cmacpeB575
Cp4.1LG04g04970Cucurbita moschata (Rifu)cmocpeB126
Cp4.1LG04g04970Cucurbita moschata (Rifu)cmocpeB320
Cp4.1LG04g04970Cucurbita moschata (Rifu)cmocpeB492
Cp4.1LG04g04970Cucurbita moschata (Rifu)cmocpeB525
Cp4.1LG04g04970Wild cucumber (PI 183967)cpecpiB692
Cp4.1LG04g04970Wild cucumber (PI 183967)cpecpiB668
Cp4.1LG04g04970Cucumber (Chinese Long) v2cpecuB665
Cp4.1LG04g04970Cucumber (Chinese Long) v2cpecuB690
Cp4.1LG04g04970Bottle gourd (USVL1VR-Ls)cpelsiB522
Cp4.1LG04g04970Bottle gourd (USVL1VR-Ls)cpelsiB526
Cp4.1LG04g04970Watermelon (Charleston Gray)cpewcgB594
Cp4.1LG04g04970Watermelon (Charleston Gray)cpewcgB597
Cp4.1LG04g04970Watermelon (97103) v1cpewmB671
Cp4.1LG04g04970Watermelon (97103) v1cpewmB674
Cp4.1LG04g04970Melon (DHL92) v3.5.1cpemeB600
Cp4.1LG04g04970Melon (DHL92) v3.5.1cpemeB610
Cp4.1LG04g04970Melon (DHL92) v3.5.1cpemeB639
Cp4.1LG04g04970Cucumber (Gy14) v2cgybcpeB234
Cp4.1LG04g04970Cucumber (Gy14) v2cgybcpeB964
Cp4.1LG04g04970Melon (DHL92) v3.6.1cpemedB708
Cp4.1LG04g04970Melon (DHL92) v3.6.1cpemedB766