CsaV3_6G052980 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGCTCTTGTCAAAATTGCGCTGTATCACCATAGATGTTACTGGTACATTGTTAGCTTACAAAGGGGAACTAGGTGATTACTATTGCATGGCAGCCAAATCCGTGGGGTTGCCATGCCCTGATTACAGGCGTGTGCATGAGGGCTTTAAGTTCGCTTACAAGGAGATGGCAAAAAACTACCCATGTTTTGGATATGCAGCAAAAATGCCTAACATCATTTGGTGGAAAACCTGCGTTAGAGATTCCTTTATCAGGGTAAGAAATTGATATGGCTGTCTAGACATACATGCATGACATGTAGATTCACAGATATACTCATCTACTGACGGATTTAGTATAGGCTCAGGGGACCCTAAACCCCTCAACTTTATGCTCTCTGTATTGCATACTAGGAAGCACAGATACTGACACGCGACATGGTGAAACGCCATTTTTTGGAAGAAAAAAAATATAGGACACGAAACGTCAATTTTTAGTAAAAAAAAGAATAAATATATGTTATGCATATAAACATATTACATAACAAGGATTCCAATTAAAAACATCAAAATAACAAGTTTATAGCCATAATTTTTTTTTTCTAAAATAAAGATGATGTTAACTCTCCTTGGACAAGTTCACGCGACCGTCAAGAGTGATGGGCGGCAACGGTGACCGGTGAGATGGTTAGGGCAGATTGGGTTGGTGGCCTGGTGGGGAGAATTGGAGAAGAGAGGGTGGAGTGCCTGAAACTTTTTCGTTTTAAGAGAATTTTTAAAAAATAAACCTAATAATTATTGCTATTGGGCGGGACTAATGTGCCGTTTCTATGGGTCTTTTTTCTCTTGCCGTGTCGGGGGTGTGTCGGTCAGAAATTTGCCCAATACCGATACTTGGTCATCTTATGAGTGCTGGTGCTTCTTAGATTACATATACATAAGACACTAAATTAATACCAATTCCAAAAGTTAGCTTAGTGTTAATGTCTCCTAGCCCGAAGTCTCACTCCTTGCATTTCTGTTCAGATTGTTTTTATTAATCTATAAAGCCCCATCAATAAAAGTTCCATCCGCCATTGTACTCATCAAATATCAATATTGATTTTTTGCATAGCATGTAGTTAATAGTACTAGATTCATAGCAATCACGGTTTGTTAGAATTTTTCTCCCGCATTCTCTTCAAGCAGTTACATTTGTAAGCATTTTCTCTTCACTTTCTCTTCAAGCGATCACATTTGTCAGAATTCCCCCCTCCTCCCCCCCCCCCCCCCCCCCCCCCCTTGTTTTAAGGCATAGACGGTTTGAGTCAAACCTGTTGTTATATCATATGTTGAATGAGAGAAAGAAACATTAATTGCTGGCACAGAATTGAAAAAACCTGCAGACTACAATTTGCGTATCACTGGGAAATTTTTATGACGTGAAAAATCTTGTTTTATTTTACCAATAGGCTGGATATGATTATGATGAAGAGACTTTTGAGAAGGTGTTTAGACGTATATATGCATCCTTTGGTTCATCTGCTCCTTATAAGGTGTTTGAGGATTCCCAACCATTCCTTAGATGGGTGCGTGAGCAAGGTCTTATGGTTGGCATTGTTAGTAATGCAGAGTACCGGTACCAGGATGTGATCCTTCCTGCCTTAGGCTTGAATCAGGTATGCCTTTCTTTTTCTTCTTTTTTGTGTTTACTGTAAATTTAGATTTTGGTCCTACGATGGGATGGAGACAATTCCTCAAAAATATATTTTTATGTAAAATTCAAAGCACTCTTGAAAATGGCATTAATAAGGTGCTTTGGAAAGTCCTTTTAAGTGGTTTTATAAGTACTTTTAGAATTTTCAATGCCGTTACCATTTTCATTTGAAGGACTAACGATGTGATAAGATAGACGTGAACGCATTTGGCCCTAATATATTTCTGTGGTTTACAAATGATCTTAGAATCTTTCCCTCTGATATTAGTATATTTTGTACAAGTACAACACTGAGTAGTGGGTAGGGGTACTCTTTTGAGTTTAAGAGTTTTACTCTTCCTGAATACACTAGAAAGATTTGCTGATGGATGCATATTGTGCTTAATGACTGTTCAGGGATCGGAATGGGACTTTGGTGTATTCTCAGGTCTTGAGGGTGTGGAGAAACCAGATCCTAGAATCTACGAGATTGCGATTGAGAGAGCTGGAAATATAGCACCTGAAGAAGCTCTCCACATTGGAGACAGCTTGCGAAAAGATTATATTCCTGCAAAGAGTGTGGGAATGCATGGTCTGTTGTTGGATAGATTTAAGACATCAGATGCTGAGGAATGGAGGAAATCTGGGGCAGTGGTGCTTCCTGATCTGGTGGCTGCTCGAGAGTGGCTTCAGAATAACTGA ATGTCGCTCTTGTCAAAATTGCGCTGTATCACCATAGATGTTACTGGTACATTGTTAGCTTACAAAGGGGAACTAGGTGATTACTATTGCATGGCAGCCAAATCCGTGGGGTTGCCATGCCCTGATTACAGGCGTGTGCATGAGGGCTTTAAGTTCGCTTACAAGGAGATGGCAAAAAACTACCCATGTTTTGGATATGCAGCAAAAATGCCTAACATCATTTGGTGGAAAACCTGCGTTAGAGATTCCTTTATCAGGGCTGGATATGATTATGATGAAGAGACTTTTGAGAAGGTGTTTAGACGTATATATGCATCCTTTGGTTCATCTGCTCCTTATAAGGTGTTTGAGGATTCCCAACCATTCCTTAGATGGGTGCGTGAGCAAGGTCTTATGGTTGGCATTGTTAGTAATGCAGAGTACCGGTACCAGGATGTGATCCTTCCTGCCTTAGGCTTGAATCAGGGATCGGAATGGGACTTTGGTGTATTCTCAGGTCTTGAGGGTGTGGAGAAACCAGATCCTAGAATCTACGAGATTGCGATTGAGAGAGCTGGAAATATAGCACCTGAAGAAGCTCTCCACATTGGAGACAGCTTGCGAAAAGATTATATTCCTGCAAAGAGTGTGGGAATGCATGGTCTGTTGTTGGATAGATTTAAGACATCAGATGCTGAGGAATGGAGGAAATCTGGGGCAGTGGTGCTTCCTGATCTGGTGGCTGCTCGAGAGTGGCTTCAGAATAACTGA ATGTCGCTCTTGTCAAAATTGCGCTGTATCACCATAGATGTTACTGGTACATTGTTAGCTTACAAAGGGGAACTAGGTGATTACTATTGCATGGCAGCCAAATCCGTGGGGTTGCCATGCCCTGATTACAGGCGTGTGCATGAGGGCTTTAAGTTCGCTTACAAGGAGATGGCAAAAAACTACCCATGTTTTGGATATGCAGCAAAAATGCCTAACATCATTTGGTGGAAAACCTGCGTTAGAGATTCCTTTATCAGGGCTGGATATGATTATGATGAAGAGACTTTTGAGAAGGTGTTTAGACGTATATATGCATCCTTTGGTTCATCTGCTCCTTATAAGGTGTTTGAGGATTCCCAACCATTCCTTAGATGGGTGCGTGAGCAAGGTCTTATGGTTGGCATTGTTAGTAATGCAGAGTACCGGTACCAGGATGTGATCCTTCCTGCCTTAGGCTTGAATCAGGGATCGGAATGGGACTTTGGTGTATTCTCAGGTCTTGAGGGTGTGGAGAAACCAGATCCTAGAATCTACGAGATTGCGATTGAGAGAGCTGGAAATATAGCACCTGAAGAAGCTCTCCACATTGGAGACAGCTTGCGAAAAGATTATATTCCTGCAAAGAGTGTGGGAATGCATGGTCTGTTGTTGGATAGATTTAAGACATCAGATGCTGAGGAATGGAGGAAATCTGGGGCAGTGGTGCTTCCTGATCTGGTGGCTGCTCGAGAGTGGCTTCAGAATAACTGA MSLLSKLRCITIDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYRRVHEGFKFAYKEMAKNYPCFGYAAKMPNIIWWKTCVRDSFIRAGYDYDEETFEKVFRRIYASFGSSAPYKVFEDSQPFLRWVREQGLMVGIVSNAEYRYQDVILPALGLNQGSEWDFGVFSGLEGVEKPDPRIYEIAIERAGNIAPEEALHIGDSLRKDYIPAKSVGMHGLLLDRFKTSDAEEWRKSGAVVLPDLVAAREWLQNN
BLAST of CsaV3_6G052980 vs. NCBI nr
Match: XP_004134528.1 (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucumis sativus] >KGN49528.1 hypothetical protein Csa_6G532590 [Cucumis sativus]) HSP 1 Score: 527.7 bits (1358), Expect = 2.1e-146 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of CsaV3_6G052980 vs. NCBI nr
Match: XP_022926076.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucurbita moschata] >XP_023544714.1 haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucurbita pepo subsp. pepo] >XP_023544715.1 haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 515.8 bits (1327), Expect = 8.4e-143 Identity = 239/249 (95.98%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of CsaV3_6G052980 vs. NCBI nr
Match: XP_022977819.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucurbita maxima]) HSP 1 Score: 514.6 bits (1324), Expect = 1.9e-142 Identity = 238/249 (95.58%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of CsaV3_6G052980 vs. NCBI nr
Match: PON48001.1 (HAD-superfamily hydrolase, subfamily IA, REG-2-like [Trema orientalis]) HSP 1 Score: 485.7 bits (1249), Expect = 9.3e-134 Identity = 221/246 (89.84%), Postives = 237/246 (96.34%), Query Frame = 0
BLAST of CsaV3_6G052980 vs. NCBI nr
Match: XP_010097041.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Morus notabilis] >EXB66779.1 Haloacid dehalogenase-like hydrolase domain-containing protein 3 [Morus notabilis]) HSP 1 Score: 483.8 bits (1244), Expect = 3.5e-133 Identity = 218/249 (87.55%), Postives = 237/249 (95.18%), Query Frame = 0
BLAST of CsaV3_6G052980 vs. TAIR10
Match: AT5G44730.2 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 429.9 bits (1104), Expect = 1.1e-120 Identity = 187/250 (74.80%), Postives = 232/250 (92.80%), Query Frame = 0
BLAST of CsaV3_6G052980 vs. TAIR10
Match: AT1G14310.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 56.6 bits (135), Expect = 2.5e-08 Identity = 47/211 (22.27%), Postives = 90/211 (42.65%), Query Frame = 0
BLAST of CsaV3_6G052980 vs. TAIR10
Match: AT2G41250.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 55.1 bits (131), Expect = 7.3e-08 Identity = 40/138 (28.99%), Postives = 65/138 (47.10%), Query Frame = 0
BLAST of CsaV3_6G052980 vs. Swiss-Prot
Match: sp|Q9CYW4|HDHD3_MOUSE (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Mus musculus OX=10090 GN=Hdhd3 PE=1 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 8.0e-28 Identity = 72/212 (33.96%), Postives = 118/212 (55.66%), Query Frame = 0
BLAST of CsaV3_6G052980 vs. Swiss-Prot
Match: sp|Q5E9D6|HDHD3_BOVIN (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Bos taurus OX=9913 GN=HDHD3 PE=2 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.4e-27 Identity = 72/212 (33.96%), Postives = 118/212 (55.66%), Query Frame = 0
BLAST of CsaV3_6G052980 vs. Swiss-Prot
Match: sp|Q7T012|HDHD3_DANRE (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Danio rerio OX=7955 GN=hdhd3 PE=2 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.0e-27 Identity = 70/213 (32.86%), Postives = 112/213 (52.58%), Query Frame = 0
BLAST of CsaV3_6G052980 vs. Swiss-Prot
Match: sp|Q94915|REG2_DROME (Rhythmically expressed gene 2 protein OS=Drosophila melanogaster OX=7227 GN=Reg-2 PE=2 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 4.2e-21 Identity = 69/227 (30.40%), Postives = 110/227 (48.46%), Query Frame = 0
BLAST of CsaV3_6G052980 vs. Swiss-Prot
Match: sp|Q5HZL9|HDHD3_XENLA (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus laevis OX=8355 GN=hdhd3 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20 Identity = 64/222 (28.83%), Postives = 109/222 (49.10%), Query Frame = 0
BLAST of CsaV3_6G052980 vs. TrEMBL
Match: tr|A0A0A0KJ36|A0A0A0KJ36_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G532590 PE=4 SV=1) HSP 1 Score: 527.7 bits (1358), Expect = 1.4e-146 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of CsaV3_6G052980 vs. TrEMBL
Match: tr|A0A2P5BGS6|A0A2P5BGS6_9ROSA (HAD-superfamily hydrolase, subfamily IA, REG-2-like OS=Trema orientalis OX=63057 GN=TorRG33x02_321640 PE=4 SV=1) HSP 1 Score: 485.7 bits (1249), Expect = 6.1e-134 Identity = 221/246 (89.84%), Postives = 237/246 (96.34%), Query Frame = 0
BLAST of CsaV3_6G052980 vs. TrEMBL
Match: tr|W9RRW5|W9RRW5_9ROSA (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Morus notabilis OX=981085 GN=L484_003872 PE=4 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 2.3e-133 Identity = 218/249 (87.55%), Postives = 237/249 (95.18%), Query Frame = 0
BLAST of CsaV3_6G052980 vs. TrEMBL
Match: tr|A0A2P5A9R9|A0A2P5A9R9_PARAD (HAD-superfamily hydrolase, subfamily IA, REG-2-like OS=Parasponia andersonii OX=3476 GN=PanWU01x14_354240 PE=4 SV=1) HSP 1 Score: 483.4 bits (1243), Expect = 3.0e-133 Identity = 219/246 (89.02%), Postives = 236/246 (95.93%), Query Frame = 0
BLAST of CsaV3_6G052980 vs. TrEMBL
Match: tr|A0A067GPK8|A0A067GPK8_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g039449mg PE=4 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 6.8e-133 Identity = 217/246 (88.21%), Postives = 238/246 (96.75%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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