CsGy6G036880 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGCTCTTGTCAAAATTGCGCTGTATCACCATAGATGTTACTGGTACATTGTTAGCTTACAAAGGGGAACTAGGTGATTACTATTGCATGGCAGCCAAATCCGTGGGGTTGCCATGCCCTGATTACAAGCGTGTGCATGAGGGCTTTAAGTTCGCTTACAAGGAGATGGCAAAAAACTACCCATGTTTTGGATATGCAGCAAAAATGCCTAACATCATTTGGTGGAAAACCTGCGTTAGAGATTCCTTTATCAGGGTAAGAAATTGATATGGCTGTCTAGACATACATGCATGACATGTAGATTCACAGATATACTCATCTACTGACGGATTTAGTATAGGCTCAGGGGACCCTAAACCCCTCAACTTTATGCTCTCTGTATTGCATACTAGGAAGCACAGATACTGACACGCGACATGGTGAAACGCCATTTTTTGGAAGAAAAAAAATATAGGACACGAAACGTCAATTTTTAGTAAAAAAAAGAATAAATATATGTTATGCATATAAACATATTACATAACAAGGATTCCAATTAAAAACATCAAAATAACAAGTTTATAGCCATAATTTTTTTTTTCTAAAATAAAGATGATGTTAACTCTCCTTGGACAAGTTCACGCGACCGTCAAGAGTGATGGGCGGCAACGGTGACCGGTGAGATGGTTAGGGCAGATTGGGTTGGTGGCCTGGTGGGGAGAATTGGAGAAGAGAGGGTGGAGTGCCTGAAACTTTTTCGTTTTAAGAGAATTTTTAAAAAATAAACCTAATAATTATTGCTATTGGGCGGGACTAATGTGCCGTTTCTATGGGTCTTTTTTCTCTTGCCGTGTCGGGGGTGTGTCGGTCAGAAATTTGCCCAATACCGATACTTGGTCATCTTATGAGTGCTGGTGCTTCTTAGATTACATATACATAAGACACTAAATTAATACCAATTCCAAAAGTTAGCTTAGTGTTAATGTCTCCTAGCCCGAAGTCTCACTCCTTGCATTTCTGTTCAGATTGTTTTTATTAATCTATAAAGCCCCATCAATAAAAGTTCCATCCGCCATTGTACTCATCAAATATCAATATTGATTTTTTGCATAGCATGTAGTTAATAGTACTAGATTCATAGCAATCACGGTTTGTTAGAATTTTTCTCCCGCATTCTCTTCAAGCAGTTACATTTGTAAGCATTTTCTCTTCACTTTCTCTTCAAGCGATCACATTTGTCAGAATTCCCCCCCTCCTCCCCCCCCCCCCCCCCCCCCCCCCCCTTGTTTTAAGGCATAGACGGTTTGAGTCAAACCTGTTGTTATATCATATGTTGAATGAGAGAAAGAAACATTAATTGCTGGCACAGAATTGAAAAAACCTGCAGACTACAATTTGCGTATCACTGGGAAATTTTTATGACGTGAAAAATCTTGTTTTATTTTACCAATAGGCTGGATATGATTATGATGAAGAGACTTTTGAGAAGGTGTTTAGACGTATATATGCATCCTTTGGTTCATCTGCTCCTTATAAGGTGTTTGAGGATTCCCAACCATTCCTTAGATGGGTGCGTGAGCAAGGTCTTATGGTTGGCATTGTTAGTAATGCAGAGTACCGGTACCAGGATGTGATCCTTCCTGCCTTAGGCTTGAATCAGGTATGCCTTTCTTTTTCTTCTTTTTTGTGTTTACTGTAAATTTAGATTTTGGTCCTACGATGGGATGGAGACAATTCCTCAAAAATATATTTTTATGTAAAATTCAAAGCACTCTTGAAAATGGCATTAATAAGGTGCTTTGGAAAGTCCTTTTAAGTGGTTTTATAAGTACTTTTAGAATTTTCAATGCCGTTACCATTTTCATTTGAAGGACTAACGATGTGATAAGATAGACGTGAACGCATTTGGCCCTAATATATTTCTGTGGTTTACAAATGATCTTAGAATCTTTCCCTCTGATATTAGTATATTTTGTACAAGTACAACACTGAGTAGTGGGTAGGGGTACTCTTTTGAGTTTAAGAGTTTTACTCTTCCTGAATACACTAGAAAGATTTGCTGATGGATGCATATTGTGCTTAATGACTGTTCAGGGATCGGAATGGGACTTTGGTGTATTCTCAGGTCTTGAGGGTGTGGAGAAACCAGATCCTAGAATCTACGAGATTGCGATTGAGAGAGCTGGAAATATAGCACCTGAAGAAGCTCTCCACATTGGAGACAGCTTGCGAAAAGATTATATTCCTGCAAAGAGTGTGGGAATGCATGGTCTGTTGTTGGATAGATTTAAGACATCAGATGCTGAGGAATGGAGGAAATCTGGGGCAGTGGTGCTTCCTGATCTGGTGGCTGCTCGAGAGTGGCTTCAGAATAACTGA ATGTCGCTCTTGTCAAAATTGCGCTGTATCACCATAGATGTTACTGGTACATTGTTAGCTTACAAAGGGGAACTAGGTGATTACTATTGCATGGCAGCCAAATCCGTGGGGTTGCCATGCCCTGATTACAAGCGTGTGCATGAGGGCTTTAAGTTCGCTTACAAGGAGATGGCAAAAAACTACCCATGTTTTGGATATGCAGCAAAAATGCCTAACATCATTTGGTGGAAAACCTGCGTTAGAGATTCCTTTATCAGGGCTGGATATGATTATGATGAAGAGACTTTTGAGAAGGTGTTTAGACGTATATATGCATCCTTTGGTTCATCTGCTCCTTATAAGGTGTTTGAGGATTCCCAACCATTCCTTAGATGGGTGCGTGAGCAAGGTCTTATGGTTGGCATTGTTAGTAATGCAGAGTACCGGTACCAGGATGTGATCCTTCCTGCCTTAGGCTTGAATCAGATTTTGGTCCTACGATGGGATGGAGACAATTCCTCAAAAATATATTTTTATGGATCGGAATGGGACTTTGGTGTATTCTCAGGTCTTGAGGGTGTGGAGAAACCAGATCCTAGAATCTACGAGATTGCGATTGAGAGAGCTGGAAATATAGCACCTGAAGAAGCTCTCCACATTGGAGACAGCTTGCGAAAAGATTATATTCCTGCAAAGAGTGTGGGAATGCATGGTCTGTTGTTGGATAGATTTAAGACATCAGATGCTGAGGAATGGAGGAAATCTGGGGCAGTGGTGCTTCCTGATCTGGTGGCTGCTCGAGAGTGGCTTCAGAATAACTGA ATGTCGCTCTTGTCAAAATTGCGCTGTATCACCATAGATGTTACTGGTACATTGTTAGCTTACAAAGGGGAACTAGGTGATTACTATTGCATGGCAGCCAAATCCGTGGGGTTGCCATGCCCTGATTACAAGCGTGTGCATGAGGGCTTTAAGTTCGCTTACAAGGAGATGGCAAAAAACTACCCATGTTTTGGATATGCAGCAAAAATGCCTAACATCATTTGGTGGAAAACCTGCGTTAGAGATTCCTTTATCAGGGCTGGATATGATTATGATGAAGAGACTTTTGAGAAGGTGTTTAGACGTATATATGCATCCTTTGGTTCATCTGCTCCTTATAAGGTGTTTGAGGATTCCCAACCATTCCTTAGATGGGTGCGTGAGCAAGGTCTTATGGTTGGCATTGTTAGTAATGCAGAGTACCGGTACCAGGATGTGATCCTTCCTGCCTTAGGCTTGAATCAGATTTTGGTCCTACGATGGGATGGAGACAATTCCTCAAAAATATATTTTTATGGATCGGAATGGGACTTTGGTGTATTCTCAGGTCTTGAGGGTGTGGAGAAACCAGATCCTAGAATCTACGAGATTGCGATTGAGAGAGCTGGAAATATAGCACCTGAAGAAGCTCTCCACATTGGAGACAGCTTGCGAAAAGATTATATTCCTGCAAAGAGTGTGGGAATGCATGGTCTGTTGTTGGATAGATTTAAGACATCAGATGCTGAGGAATGGAGGAAATCTGGGGCAGTGGTGCTTCCTGATCTGGTGGCTGCTCGAGAGTGGCTTCAGAATAACTGA MSLLSKLRCITIDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKFAYKEMAKNYPCFGYAAKMPNIIWWKTCVRDSFIRAGYDYDEETFEKVFRRIYASFGSSAPYKVFEDSQPFLRWVREQGLMVGIVSNAEYRYQDVILPALGLNQILVLRWDGDNSSKIYFYGSEWDFGVFSGLEGVEKPDPRIYEIAIERAGNIAPEEALHIGDSLRKDYIPAKSVGMHGLLLDRFKTSDAEEWRKSGAVVLPDLVAAREWLQNN
BLAST of CsGy6G036880 vs. NCBI nr
Match: XP_004134528.1 (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucumis sativus] >KGN49528.1 hypothetical protein Csa_6G532590 [Cucumis sativus]) HSP 1 Score: 514.6 bits (1324), Expect = 2.0e-142 Identity = 248/266 (93.23%), Postives = 249/266 (93.61%), Query Frame = 0
BLAST of CsGy6G036880 vs. NCBI nr
Match: XP_022926076.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucurbita moschata] >XP_023544714.1 haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucurbita pepo subsp. pepo] >XP_023544715.1 haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 505.0 bits (1299), Expect = 1.6e-139 Identity = 240/266 (90.23%), Postives = 248/266 (93.23%), Query Frame = 0
BLAST of CsGy6G036880 vs. NCBI nr
Match: XP_022977819.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucurbita maxima]) HSP 1 Score: 503.8 bits (1296), Expect = 3.5e-139 Identity = 239/266 (89.85%), Postives = 248/266 (93.23%), Query Frame = 0
BLAST of CsGy6G036880 vs. NCBI nr
Match: PON48001.1 (HAD-superfamily hydrolase, subfamily IA, REG-2-like [Trema orientalis]) HSP 1 Score: 475.3 bits (1222), Expect = 1.3e-130 Identity = 222/263 (84.41%), Postives = 237/263 (90.11%), Query Frame = 0
BLAST of CsGy6G036880 vs. NCBI nr
Match: PON33264.1 (HAD-superfamily hydrolase, subfamily IA, REG-2-like [Parasponia andersonii]) HSP 1 Score: 473.0 bits (1216), Expect = 6.6e-130 Identity = 220/263 (83.65%), Postives = 236/263 (89.73%), Query Frame = 0
BLAST of CsGy6G036880 vs. TAIR10
Match: AT5G44730.2 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 423.7 bits (1088), Expect = 8.4e-119 Identity = 188/267 (70.41%), Postives = 232/267 (86.89%), Query Frame = 0
BLAST of CsGy6G036880 vs. TAIR10
Match: AT1G14310.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 48.9 bits (115), Expect = 5.6e-06 Identity = 48/228 (21.05%), Postives = 91/228 (39.91%), Query Frame = 0
BLAST of CsGy6G036880 vs. TAIR10
Match: AT2G41250.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 47.0 bits (110), Expect = 2.1e-05 Identity = 39/154 (25.32%), Postives = 65/154 (42.21%), Query Frame = 0
BLAST of CsGy6G036880 vs. Swiss-Prot
Match: sp|Q9CYW4|HDHD3_MOUSE (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Mus musculus OX=10090 GN=Hdhd3 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 7.9e-26 Identity = 72/229 (31.44%), Postives = 118/229 (51.53%), Query Frame = 0
BLAST of CsGy6G036880 vs. Swiss-Prot
Match: sp|Q5E9D6|HDHD3_BOVIN (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Bos taurus OX=9913 GN=HDHD3 PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.4e-25 Identity = 72/229 (31.44%), Postives = 118/229 (51.53%), Query Frame = 0
BLAST of CsGy6G036880 vs. Swiss-Prot
Match: sp|Q7T012|HDHD3_DANRE (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Danio rerio OX=7955 GN=hdhd3 PE=2 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.9e-25 Identity = 73/230 (31.74%), Postives = 113/230 (49.13%), Query Frame = 0
BLAST of CsGy6G036880 vs. Swiss-Prot
Match: sp|Q5HZL9|HDHD3_XENLA (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus laevis OX=8355 GN=hdhd3 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.1e-19 Identity = 67/239 (28.03%), Postives = 113/239 (47.28%), Query Frame = 0
BLAST of CsGy6G036880 vs. Swiss-Prot
Match: sp|Q94915|REG2_DROME (Rhythmically expressed gene 2 protein OS=Drosophila melanogaster OX=7227 GN=Reg-2 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.1e-19 Identity = 71/242 (29.34%), Postives = 113/242 (46.69%), Query Frame = 0
BLAST of CsGy6G036880 vs. TrEMBL
Match: tr|A0A0A0KJ36|A0A0A0KJ36_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G532590 PE=4 SV=1) HSP 1 Score: 514.6 bits (1324), Expect = 1.3e-142 Identity = 248/266 (93.23%), Postives = 249/266 (93.61%), Query Frame = 0
BLAST of CsGy6G036880 vs. TrEMBL
Match: tr|A0A2P5BGS6|A0A2P5BGS6_9ROSA (HAD-superfamily hydrolase, subfamily IA, REG-2-like OS=Trema orientalis OX=63057 GN=TorRG33x02_321640 PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 8.8e-131 Identity = 222/263 (84.41%), Postives = 237/263 (90.11%), Query Frame = 0
BLAST of CsGy6G036880 vs. TrEMBL
Match: tr|W9RRW5|W9RRW5_9ROSA (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Morus notabilis OX=981085 GN=L484_003872 PE=4 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 4.4e-130 Identity = 219/266 (82.33%), Postives = 237/266 (89.10%), Query Frame = 0
BLAST of CsGy6G036880 vs. TrEMBL
Match: tr|A0A2P5A9R9|A0A2P5A9R9_PARAD (HAD-superfamily hydrolase, subfamily IA, REG-2-like OS=Parasponia andersonii OX=3476 GN=PanWU01x14_354240 PE=4 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 4.4e-130 Identity = 220/263 (83.65%), Postives = 236/263 (89.73%), Query Frame = 0
BLAST of CsGy6G036880 vs. TrEMBL
Match: tr|A0A067GPK8|A0A067GPK8_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g039449mg PE=4 SV=1) HSP 1 Score: 471.9 bits (1213), Expect = 9.8e-130 Identity = 218/263 (82.89%), Postives = 238/263 (90.49%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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