CsaV3_6G036310 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G036310
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionAP2-like ethylene-responsive transcription factor
Locationchr6 : 20178210 .. 20180742 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCCGTCAAGGGGGTCAAGAGACGGCGGAGAAATGCTTCTTCTTCCTCCCCCACAGTCGGTGGTGGTGGAGATGGTCAACCACACAAGTTAATGCCAAATCAATCCACTGCCACAAAGAGAAGCTCAAAGTTTCGTGGAGTTAGCAGGTACTCATTCACAGTACTTTCACAATTTTTAATTTTCTTCTTCTTTAATTATTCTCTGACTTCTCTTTTTACTTCTCTTTTTATGTATTTAATTTAAGTTCTTTTACAGTCTTTTTTTTTTATTTAGTGGAAATTTTAAAAGGTTTGAGTTCAGTATAGCATACGAGAATGAGACCATAAAATTATGATTTATCCTTGAGACTAAGCAAATAGAAAATAAACAGACACCGATGGACAGGACGATTTGAAGCTCATTTATGGGACAAAGGGTCTTGGAATCCAACCCAAAGAAAGAAAGGAAAACAAGGTAAATAAATGGAGAAAAGAAAAAAAAGGAACTACTTAATTTTCATATATTTGGTGTTTGTGGAAGAATGGCAAATTAATTAAAGCTCATAATTTTGACTTGTCTGTGTTATATTGTGATATGTGATGATGAATGATGATGAACTCATTGGTGACATTGTAATAAATGGAGCAGTTTATTTAGGTATGTTTTGTTAATATAACAAATTAAATTGTAAATACATATCATAAAGTATAAAATCAAAGTATATGATGATGTGATAAATGTGTGTTTAAATGAAAACAGGAGCTTATGATGAAGAAGAATCAGCCGCTAGAGCATATGACTTGGCTGCACTTAAGTACTGGGGAACATCCACTTTCACTAATTTTTCGGTACCCTTTTCATTATTATTCTATTTGCTCCACTAATTATCATTAGTTGTTAATTAACTTCTTCACACAATCAATTAAGAGTACTTAAAAAGTCCACATTTTCATAGTCTTAAAAACTAGCTGATCATAACAATAACAATTAATTCTAAAAAACTATATAAGAAATGAGAAATTTCAACAAATTCAACGAGCCAACCTTGGTATTTGAACGCAAGCATTACAAATCCAACAAACTTAATTTATCACCTCAAACACGACTACAACATTTATAGTAATTCTAATTCTAGGCAACAACGAACCTCATTGTAAATCAATTTTTTAGTTACATCGATTACATTCAAATGACTCTATAAAAGATCACTCAAACTGCGGCCACATCTCATCACACAAGTATTATTAATTATGTGTATCAATTGCAAAACCTTAGGGCAACAAACGGGCTTAGTTGTCCCTAAATTTCACCAATATGTATGCTTACTTGCTAAAACGTGACTACTATTTGAATTATTTCTTTTACCTAAGTTAATAAAATATGTCATCAACTTTAATTTATCGTAGAGTGTGTGTGAAAACTACTTTTAAACTTTTACAAAGATTTTGAAAATATTTTTATCGTTAGTTTTGAATAACGAAACTTTGAAAGTTCAAAAAAGTATTCTTAAACTAAAAAAAAGAATAACCCTAAATTAAAAAAGAAGTTAAAGAAATATTTCAATCCTTAATTCCGTGATAAATATGATTGAAGTTCCTTTAAGCAAAAAAAAAAAAGTCAATTTTAAAATAATTTATATAAACACTTTCATTTTCTCCTATTTTTCAAATTCTATCAAATATATCCAAACCTAAACCTAAATTAATGCAAAATTCGAGAATCAGAGTCTCCTACGTGGAACTTTGTTCAAACATTTAAGTTCTAAAGTTTTTCGATGCTTTCATTATTATTCTTTTTAGTTTATATACCTGATTTGGAATGTACATTTTTTTTTCTTTTCAAGATAAACACACATGCCAAATGGTTTAAAATAGAGTAAAAGGATATGGAGAAGTAGAAGAGAATAAAGAGAAAATGGAGAAGTAAGAATGATATTAACCATTTATGTTCGGATAATCATAAGTGTAATTTTTAAAGAAAAATTTTGACACACGACTAAAATGGCATCATCCAAAACTAACCATAACCATATTTTTCAATATTCAATTGAAATTAACGTAAATATTTAATTAGATATGAATAATTTAATTATATAAGATAATATAAATTAAAATATTCAATTGTGTGTGTGTGTGAAAATTTTAAAACAGTTAAGGAAATTGAAAATTGAAAAAGGAAATTAAAACCAATCTATATTTAGTTTAAGCCATGATTTAATTATCTGGTTTGTTCATATAGTAATTGCTGATTATTTTGTGCAGATATCTGATTATGAGAATGAGATTAAGATAATGAAAACTGTGACAAAAGAGGAATACTTGGCCTCTTTGAGAAGGTAATTAATTTTCCATACTTTTTATCTTACATTTTGTTTCATTACCATATGATTTCTAATTTTAATTTTTGCAAATTAAACAATATTAATCATTCTACAACGTTGCAAAAGTTTAGCTTTATGTTTTGGCTTCATTCATTCTTACTAGGAGAAGTAGCGGTTTCTCGAGAGGTGTATCAAGATATCGAGGAGTCGCAAGGTAATGCCACTTAG

mRNA sequence

ATGGCCGCCGTCAAGGGGGTCAAGAGACGGCGGAGAAATGCTTCTTCTTCCTCCCCCACAGTCGGTGGTGGTGGAGATGGTCAACCACACAAGTTAATGCCAAATCAATCCACTGCCACAAAGAGAAGCTCAAAGTTTCGTGGAGTTAGCAGACACCGATGGACAGGACGATTTGAAGCTCATTTATGGGACAAAGGGTCTTGGAATCCAACCCAAAGAAAGAAAGGAAAACAAGGAGCTTATGATGAAGAAGAATCAGCCGCTAGAGCATATGACTTGGCTGCACTTAAGTACTGGGGAACATCCACTTTCACTAATTTTTCGATATCTGATTATGAGAATGAGATTAAGATAATGAAAACTGTGACAAAAGAGGAATACTTGGCCTCTTTGAGAAGCTTTATGTTTTGGCTTCATTCATTCTTACTAGGAGAAGTAGCGGTTTCTCGAGAGGTGTATCAAGATATCGAGGAGTCGCAAGGTAATGCCACTTAG

Coding sequence (CDS)

ATGGCCGCCGTCAAGGGGGTCAAGAGACGGCGGAGAAATGCTTCTTCTTCCTCCCCCACAGTCGGTGGTGGTGGAGATGGTCAACCACACAAGTTAATGCCAAATCAATCCACTGCCACAAAGAGAAGCTCAAAGTTTCGTGGAGTTAGCAGACACCGATGGACAGGACGATTTGAAGCTCATTTATGGGACAAAGGGTCTTGGAATCCAACCCAAAGAAAGAAAGGAAAACAAGGAGCTTATGATGAAGAAGAATCAGCCGCTAGAGCATATGACTTGGCTGCACTTAAGTACTGGGGAACATCCACTTTCACTAATTTTTCGATATCTGATTATGAGAATGAGATTAAGATAATGAAAACTGTGACAAAAGAGGAATACTTGGCCTCTTTGAGAAGCTTTATGTTTTGGCTTCATTCATTCTTACTAGGAGAAGTAGCGGTTTCTCGAGAGGTGTATCAAGATATCGAGGAGTCGCAAGGTAATGCCACTTAG

Protein sequence

MAAVKGVKRRRRNASSSSPTVGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLRSFMFWLHSFLLGEVAVSREVYQDIEESQGNAT
Homology
[Close]
BLAST of CsaV3_6G036310 vs. NCBI nr
Match: KGN47811.1 (hypothetical protein Csa_6G404260 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 3.9e-56
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MAAVKGVKXXXXXXXXXXXXXXXXXXGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEA 60
           MAAVKGVKXXXXXXXXXXXXXXXXXXGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEA
Sbjct: 18  MAAVKGVKXXXXXXXXXXXXXXXXXXGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEA 77

Query: 61  HLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIMK 120
           HLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIMK
Sbjct: 78  HLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIMK 137

Query: 121 TVTKEEYLASLR 133
           TVTKEEYLASLR
Sbjct: 138 TVTKEEYLASLR 149

[Close]
BLAST of CsaV3_6G036310 vs. NCBI nr
Match: XP_011658453.1 (PREDICTED: ethylene-responsive transcription factor WRI1-like [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 1.7e-54
Identity = 132/135 (97.78%), Postives = 132/135 (97.78%), Query Frame = 0 

Query: 1   MAAVKGVKXXXXXXXXXXXXXXXXXXGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEA 60
           MAAVKGVKXXXXXXXXXXXXXXXXXXGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEA
Sbjct: 18  MAAVKGVKXXXXXXXXXXXXXXXXXXGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEA 77

Query: 61  HLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIK 120
           HLWDKGSWNPTQRKKGKQ   GAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIK
Sbjct: 78  HLWDKGSWNPTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIK 137

Query: 121 IMKTVTKEEYLASLR 133
           IMKTVTKEEYLASLR
Sbjct: 138 IMKTVTKEEYLASLR 152

[Close]
BLAST of CsaV3_6G036310 vs. NCBI nr
Match: XP_008456799.1 (PREDICTED: AP2-like ethylene-responsive transcription factor At1g79700 [Cucumis melo])

HSP 1 Score: 213.4 bits (542), Expect = 5.9e-52
Identity = 123/135 (91.11%), Postives = 123/135 (91.11%), Query Frame = 0 

Query: 1   MAAVKGVKXXXXXXXXXXXXXXXXXXGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEA 60
           MAAVKGVK  XXXXXXXXXXX     GQPHK MPNQSTATKRSSKFRGVSRHRWTGRFEA
Sbjct: 18  MAAVKGVK-RXXXXXXXXXXXGDGGDGQPHKSMPNQSTATKRSSKFRGVSRHRWTGRFEA 77

Query: 61  HLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIK 120
           HLWDKGSWNPTQRKKGKQ   GAYDEEESAARAYDLAALKYWGTSTFTNF ISDYENEIK
Sbjct: 78  HLWDKGSWNPTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYENEIK 137

Query: 121 IMKTVTKEEYLASLR 133
           IMKTVTKEEYLASLR
Sbjct: 138 IMKTVTKEEYLASLR 151

[Close]
BLAST of CsaV3_6G036310 vs. NCBI nr
Match: XP_023546415.1 (ethylene-responsive transcription factor WRI1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.5 bits (493), Expect = 2.8e-46
Identity = 97/108 (89.81%), Postives = 100/108 (92.59%), Query Frame = 0 

Query: 28  QPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEE 87
           QP K   +QSTATKRSS+FRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ   GAYDEE
Sbjct: 35  QPPKSPADQSTATKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQVYLGAYDEE 94

Query: 88  ESAARAYDLAALKYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 133
           ESAARAYDLAALKYWGTSTFTNFS+SDYENEIKIMK VTKEEYLASLR
Sbjct: 95  ESAARAYDLAALKYWGTSTFTNFSVSDYENEIKIMKRVTKEEYLASLR 142

[Close]
BLAST of CsaV3_6G036310 vs. NCBI nr
Match: XP_022998979.1 (ethylene-responsive transcription factor WRI1-like [Cucurbita maxima])

HSP 1 Score: 193.4 bits (490), Expect = 6.3e-46
Identity = 96/108 (88.89%), Postives = 100/108 (92.59%), Query Frame = 0 

Query: 28  QPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEE 87
           QP K   +QSTATKRSS+FRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ   GAYDEE
Sbjct: 35  QPPKSAADQSTATKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQVYLGAYDEE 94

Query: 88  ESAARAYDLAALKYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 133
           ESAARAYDLAALKYWGTSTFTNFS+SDYE EIKIMK+VTKEEYLASLR
Sbjct: 95  ESAARAYDLAALKYWGTSTFTNFSVSDYEKEIKIMKSVTKEEYLASLR 142

[Close]
BLAST of CsaV3_6G036310 vs. TAIR10
Match: AT1G79700.2 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 136.3 bits (342), Expect = 1.7e-32
Identity = 64/102 (62.75%), Postives = 79/102 (77.45%), Query Frame = 0 

Query: 34  PNQSTATKRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARA 93
           P ++   +RSS +RGV+RHRWTGR+EAHLWDK SWN TQ KKG+Q   GAYDEEE+AARA
Sbjct: 41  PPRNAPLQRSSPYRGVTRHRWTGRYEAHLWDKNSWNDTQTKKGRQVYLGAYDEEEAAARA 100

Query: 94  YDLAALKYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 133
           YDLAALKYWG  T  NF +  Y+ ++K M+  +KEEY+ SLR
Sbjct: 101 YDLAALKYWGRDTLLNFPLPSYDEDVKEMEGQSKEEYIGSLR 142

[Close]
BLAST of CsaV3_6G036310 vs. TAIR10
Match: AT3G54320.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 134.8 bits (338), Expect = 4.8e-32
Identity = 66/97 (68.04%), Postives = 74/97 (76.29%), Query Frame = 0 

Query: 39  ATKRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAA 98
           +T+RSS +RGV+RHRWTGRFEAHLWDK SWN  Q KKGKQ   GAYD EE+AA  YDLAA
Sbjct: 59  STRRSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGKQVYLGAYDSEEAAAHTYDLAA 118

Query: 99  LKYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 133
           LKYWG  T  NF    Y  E++ M+ VTKEEYLASLR
Sbjct: 119 LKYWGPDTILNFPAETYTKELEEMQRVTKEEYLASLR 155

[Close]
BLAST of CsaV3_6G036310 vs. TAIR10
Match: AT1G16060.1 (ARIA-interacting double AP2 domain protein)

HSP 1 Score: 134.0 bits (336), Expect = 8.2e-32
Identity = 64/95 (67.37%), Postives = 77/95 (81.05%), Query Frame = 0 

Query: 41  KRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALK 100
           +RSS  RGV+RHRWTGR+EAHLWDK SWN TQ KKG+Q   GAYDEE++AARAYDLAALK
Sbjct: 54  QRSSVHRGVTRHRWTGRYEAHLWDKNSWNETQTKKGRQVYLGAYDEEDAAARAYDLAALK 113

Query: 101 YWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 133
           YWG  T  NF + +YE +IK M++ +KEEY+ SLR
Sbjct: 114 YWGRDTILNFPLCNYEEDIKEMESQSKEEYIGSLR 148

[Close]
BLAST of CsaV3_6G036310 vs. TAIR10
Match: AT2G41710.3 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-29
Identity = 58/91 (63.74%), Postives = 72/91 (79.12%), Query Frame = 0 

Query: 45  KFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGT 104
           K   +SRHRWTGR+EAHLWDK +WN  Q KKGKQ   GAYD+EE+AARAYDLAALKYWG 
Sbjct: 105 KLEEMSRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGP 164

Query: 105 STFTNFSISDYENEIKIMKTVTKEEYLASLR 133
            T  NF ++DY  +++ M+ +++EEYLASLR
Sbjct: 165 GTLINFPVTDYTRDLEEMQNLSREEYLASLR 195

[Close]
BLAST of CsaV3_6G036310 vs. TAIR10
Match: AT5G17430.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 124.0 bits (310), Expect = 8.5e-29
Identity = 59/95 (62.11%), Postives = 76/95 (80.00%), Query Frame = 0 

Query: 41  KRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALK 100
           +R+S +RGV+RHRWTGR+EAHLWD       Q +KG+Q   G YD+EE AARAYDLAALK
Sbjct: 206 QRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALK 265

Query: 101 YWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 133
           YWGT+T TNF +S+YE E++ MK +T++EY+ASLR
Sbjct: 266 YWGTTTTTNFPLSEYEKEVEEMKHMTRQEYVASLR 300

[Close]
BLAST of CsaV3_6G036310 vs. Swiss-Prot
Match: sp|Q8GWK2|AP2L4_ARATH (AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana OX=3702 GN=At2g41710 PE=2 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-32
Identity = 66/102 (64.71%), Postives = 82/102 (80.39%), Query Frame = 0 

Query: 38  TATKRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLA 97
           TA KRSS +RGV+RHRWTGR+EAHLWDK +WN  Q KKGKQ   GAYD+EE+AARAYDLA
Sbjct: 63  TAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLA 122

Query: 98  ALKYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLRSFMF 137
           ALKYWG  T  NF ++DY  +++ M+ +++EEYLASLR + F
Sbjct: 123 ALKYWGPGTLINFPVTDYTRDLEEMQNLSREEYLASLRRYPF 164

[Close]
BLAST of CsaV3_6G036310 vs. Swiss-Prot
Match: sp|A0JPZ8|AP2L3_ARATH (AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thaliana OX=3702 GN=At1g79700 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.0e-31
Identity = 64/102 (62.75%), Postives = 79/102 (77.45%), Query Frame = 0 

Query: 34  PNQSTATKRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARA 93
           P ++   +RSS +RGV+RHRWTGR+EAHLWDK SWN TQ KKG+Q   GAYDEEE+AARA
Sbjct: 41  PPRNAPLQRSSPYRGVTRHRWTGRYEAHLWDKNSWNDTQTKKGRQVYLGAYDEEEAAARA 100

Query: 94  YDLAALKYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 133
           YDLAALKYWG  T  NF +  Y+ ++K M+  +KEEY+ SLR
Sbjct: 101 YDLAALKYWGRDTLLNFPLPSYDEDVKEMEGQSKEEYIGSLR 142

[Close]
BLAST of CsaV3_6G036310 vs. Swiss-Prot
Match: sp|Q6X5Y6|WRI1_ARATH (Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana OX=3702 GN=WRI1 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.7e-31
Identity = 66/97 (68.04%), Postives = 74/97 (76.29%), Query Frame = 0 

Query: 39  ATKRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAA 98
           +T+RSS +RGV+RHRWTGRFEAHLWDK SWN  Q KKGKQ   GAYD EE+AA  YDLAA
Sbjct: 59  STRRSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGKQVYLGAYDSEEAAAHTYDLAA 118

Query: 99  LKYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 133
           LKYWG  T  NF    Y  E++ M+ VTKEEYLASLR
Sbjct: 119 LKYWGPDTILNFPAETYTKELEEMQRVTKEEYLASLR 155

[Close]
BLAST of CsaV3_6G036310 vs. Swiss-Prot
Match: sp|Q94AN4|AP2L1_ARATH (AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thaliana OX=3702 GN=At1g16060 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.5e-30
Identity = 64/95 (67.37%), Postives = 77/95 (81.05%), Query Frame = 0 

Query: 41  KRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALK 100
           +RSS  RGV+RHRWTGR+EAHLWDK SWN TQ KKG+Q   GAYDEE++AARAYDLAALK
Sbjct: 54  QRSSVHRGVTRHRWTGRYEAHLWDKNSWNETQTKKGRQVYLGAYDEEDAAARAYDLAALK 113

Query: 101 YWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 133
           YWG  T  NF + +YE +IK M++ +KEEY+ SLR
Sbjct: 114 YWGRDTILNFPLCNYEEDIKEMESQSKEEYIGSLR 148

[Close]
BLAST of CsaV3_6G036310 vs. Swiss-Prot
Match: sp|Q84Z02|CRL5_ORYSJ (AP2-like ethylene-responsive transcription factor CRL5 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL5 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 9.0e-28
Identity = 57/95 (60.00%), Postives = 73/95 (76.84%), Query Frame = 0 

Query: 38  TATKRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALK 97
           T  +R+S++RGV+RHRWTGR+EAHLWD       Q +KG+QG YD EE AARAYDLAALK
Sbjct: 281 TFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALK 340

Query: 98  YWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 133
           YWG ST  NF + DY+ E++ MK +T++EY+A LR
Sbjct: 341 YWGPSTHINFPLEDYQEELEEMKNMTRQEYVAHLR 375

[Close]
BLAST of CsaV3_6G036310 vs. TrEMBL
Match: tr|A0A0A0KJ57|A0A0A0KJ57_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G404260 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.6e-56
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MAAVKGVKXXXXXXXXXXXXXXXXXXGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEA 60
           MAAVKGVKXXXXXXXXXXXXXXXXXXGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEA
Sbjct: 18  MAAVKGVKXXXXXXXXXXXXXXXXXXGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEA 77

Query: 61  HLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIMK 120
           HLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIMK
Sbjct: 78  HLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIMK 137

Query: 121 TVTKEEYLASLR 133
           TVTKEEYLASLR
Sbjct: 138 TVTKEEYLASLR 149

[Close]
BLAST of CsaV3_6G036310 vs. TrEMBL
Match: tr|A0A1S3C431|A0A1S3C431_CUCME (AP2-like ethylene-responsive transcription factor At1g79700 OS=Cucumis melo OX=3656 GN=LOC103496639 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.9e-52
Identity = 123/135 (91.11%), Postives = 123/135 (91.11%), Query Frame = 0 

Query: 1   MAAVKGVKXXXXXXXXXXXXXXXXXXGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEA 60
           MAAVKGVK  XXXXXXXXXXX     GQPHK MPNQSTATKRSSKFRGVSRHRWTGRFEA
Sbjct: 18  MAAVKGVK-RXXXXXXXXXXXGDGGDGQPHKSMPNQSTATKRSSKFRGVSRHRWTGRFEA 77

Query: 61  HLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIK 120
           HLWDKGSWNPTQRKKGKQ   GAYDEEESAARAYDLAALKYWGTSTFTNF ISDYENEIK
Sbjct: 78  HLWDKGSWNPTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYENEIK 137

Query: 121 IMKTVTKEEYLASLR 133
           IMKTVTKEEYLASLR
Sbjct: 138 IMKTVTKEEYLASLR 151

[Close]
BLAST of CsaV3_6G036310 vs. TrEMBL
Match: tr|B9HV97|B9HV97_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G092800v3 PE=4 SV=2)

HSP 1 Score: 183.0 bits (463), Expect = 5.6e-43
Identity = 87/96 (90.62%), Postives = 91/96 (94.79%), Query Frame = 0 

Query: 37  STATKRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAAL 96
           +T  KRSS+FRGVSRHRWTGRFEAHLWDKG+WNPTQRKKGKQGAYDEEESAARAYDLAAL
Sbjct: 72  ATTVKRSSRFRGVSRHRWTGRFEAHLWDKGTWNPTQRKKGKQGAYDEEESAARAYDLAAL 131

Query: 97  KYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 133
           KYWGTSTFTNF  SDYE EI+IMKTVTKEEYLASLR
Sbjct: 132 KYWGTSTFTNFPASDYEKEIEIMKTVTKEEYLASLR 167

[Close]
BLAST of CsaV3_6G036310 vs. TrEMBL
Match: tr|A0A061EIB6|A0A061EIB6_THECC (Integrase-type DNA-binding superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_011797 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 9.6e-43
Identity = 89/108 (82.41%), Postives = 96/108 (88.89%), Query Frame = 0 

Query: 27  GQPHKLMPNQSTAT--KRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGAYDEE 86
           G+  +   +Q TAT  KRSS+FRGVSRHRWTGRFEAHLWDK SWNPTQRKKGKQGAYDEE
Sbjct: 49  GEQQQQQGDQPTATTVKRSSRFRGVSRHRWTGRFEAHLWDKASWNPTQRKKGKQGAYDEE 108

Query: 87  ESAARAYDLAALKYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 133
           ESAARAYDLAA+KYWGTSTFTNF +SDYE EI+IMK VTKEEYLASLR
Sbjct: 109 ESAARAYDLAAIKYWGTSTFTNFPVSDYEKEIEIMKAVTKEEYLASLR 156

[Close]
BLAST of CsaV3_6G036310 vs. TrEMBL
Match: tr|A0A0B2RBJ5|A0A0B2RBJ5_GLYSO (Ethylene-responsive transcription factor WRI1 OS=Glycine soja OX=3848 GN=glysoja_037161 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.3e-42
Identity = 88/107 (82.24%), Postives = 98/107 (91.59%), Query Frame = 0 

Query: 28  QPHKLMPNQSTAT--KRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGAYDEEE 87
           +  K +  QSTAT  KRSS+FRGVSRHRWTGRFEAHLWDKG+WNPTQ+KKGKQGAY++EE
Sbjct: 54  EEQKQLCGQSTATTVKRSSRFRGVSRHRWTGRFEAHLWDKGTWNPTQKKKGKQGAYNDEE 113

Query: 88  SAARAYDLAALKYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 133
           +AARAYDLAALKYWGTSTFTNF +SDYE EI+IMKTVTKEEYLASLR
Sbjct: 114 AAARAYDLAALKYWGTSTFTNFPVSDYEKEIEIMKTVTKEEYLASLR 160

The following BLAST results are available for this feature:
BLAST of CsaV3_6G036310 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47811.13.9e-56100.00hypothetical protein Csa_6G404260 [Cucumis sativus][more]
XP_011658453.11.7e-5497.78PREDICTED: ethylene-responsive transcription factor WRI1-like [Cucumis sativus][more]
XP_008456799.15.9e-5291.11PREDICTED: AP2-like ethylene-responsive transcription factor At1g79700 [Cucumis ... [more]
XP_023546415.12.8e-4689.81ethylene-responsive transcription factor WRI1-like [Cucurbita pepo subsp. pepo][more]
XP_022998979.16.3e-4688.89ethylene-responsive transcription factor WRI1-like [Cucurbita maxima][more]
BLAST of CsaV3_6G036310 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G79700.21.7e-3262.75Integrase-type DNA-binding superfamily protein[more]
AT3G54320.14.8e-3268.04Integrase-type DNA-binding superfamily protein[more]
AT1G16060.18.2e-3267.37ARIA-interacting double AP2 domain protein[more]
AT2G41710.32.2e-2963.74Integrase-type DNA-binding superfamily protein[more]
AT5G17430.18.5e-2962.11Integrase-type DNA-binding superfamily protein[more]
BLAST of CsaV3_6G036310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8GWK2|AP2L4_ARATH1.6e-3264.71AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thali... [more]
sp|A0JPZ8|AP2L3_ARATH3.0e-3162.75AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thali... [more]
sp|Q6X5Y6|WRI1_ARATH8.7e-3168.04Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q94AN4|AP2L1_ARATH1.5e-3067.37AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thali... [more]
sp|Q84Z02|CRL5_ORYSJ9.0e-2860.00AP2-like ethylene-responsive transcription factor CRL5 OS=Oryza sativa subsp. ja... [more]
BLAST of CsaV3_6G036310 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KJ57|A0A0A0KJ57_CUCSA2.6e-56100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G404260 PE=4 SV=1[more]
tr|A0A1S3C431|A0A1S3C431_CUCME3.9e-5291.11AP2-like ethylene-responsive transcription factor At1g79700 OS=Cucumis melo OX=3... [more]
tr|B9HV97|B9HV97_POPTR5.6e-4390.63Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G092800v3 PE=... [more]
tr|A0A061EIB6|A0A061EIB6_THECC9.6e-4382.41Integrase-type DNA-binding superfamily protein OS=Theobroma cacao OX=3641 GN=TCM... [more]
tr|A0A0B2RBJ5|A0A0B2RBJ5_GLYSO1.3e-4282.24Ethylene-responsive transcription factor WRI1 OS=Glycine soja OX=3848 GN=glysoja... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR017392AP2/ERF-transcript_factor
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0007275 multicellular organism development
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G036310.1CsaV3_6G036310.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 45..114
e-value: 6.0E-17
score: 72.3
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 44..100
e-value: 7.7E-9
score: 35.6
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 45..108
score: 17.596
IPR001471AP2/ERF domainCDDcd00018AP2coord: 44..110
e-value: 1.54726E-16
score: 69.2227
IPR017392AP2/ERF transcription factor ERF/PTI6PIRSFPIRSF038123PTI6coord: 119..160
e-value: 540.0
score: -2.1
coord: 25..134
e-value: 4.5E-11
score: 40.8
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 44..110
e-value: 3.1E-16
score: 60.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availablePANTHERPTHR32467:SF73SUBFAMILY NOT NAMEDcoord: 5..132
NoneNo IPR availablePANTHERPTHR32467FAMILY NOT NAMEDcoord: 5..132
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 44..109

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G036310CSPI06G21270Wild cucumber (PI 183967)cpicucB363
CsaV3_6G036310CmaCh05G009270Cucurbita maxima (Rimu)cmacucB0953
CsaV3_6G036310Cp4.1LG11g07400Cucurbita pepo (Zucchini)cpecucB0135
CsaV3_6G036310CsGy6G020520Cucumber (Gy14) v2cgybcucB298
CsaV3_6G036310Cla021881Watermelon (97103) v1cucwmB495
CsaV3_6G036310ClCG08G008850Watermelon (Charleston Gray)cucwcgB528
CsaV3_6G036310Lsi08G007340Bottle gourd (USVL1VR-Ls)cuclsiB510
CsaV3_6G036310Cla97C08G151660Watermelon (97103) v2cucwmbB518
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G036310Cucumber (Gy14) v1cgycucB053
CsaV3_6G036310Cucurbita maxima (Rimu)cmacucB0223
CsaV3_6G036310Cucurbita moschata (Rifu)cmocucB0210
CsaV3_6G036310Cucurbita pepo (Zucchini)cpecucB1034
CsaV3_6G036310Melon (DHL92) v3.5.1cucmeB485
CsaV3_6G036310Melon (DHL92) v3.6.1cucmedB475