CmaCh05G009270 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh05G009270
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionAP2-like ethylene-responsive transcription factor
LocationCma_Chr05 : 7492886 .. 7495751 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTTTACAGTTCTAAATTCAGAGTTCTGTTCTTTCAAAACTGATTCCGTGGCCGTCAACTGCATAAGGAGACGGCGGAGAAGCTGCAAGGGAAGCCGTCAACCACCCAAGTCAGCGGCAGATCAATCCACTGCCACAAAAAGAAGCTCCAGGTTTCGTGGAGTTAGCAGGTATTGAGAATATATTGACAACTACTTAAAATAAAAACTAAACTACTATACAAATCACCCGTTGGGTTTCATAAGTGGAGTTTATGTCGGAGCTTGAGTAGAATGTTGAATTTAGGAGTGTACACGAGTTAGGTTGGATAGGATAGGAAAAATCTTTTGGACCAACTCGAAAATTTTGGTTGGTTGAGTTGGTGACAAGAGCAATTAGAATAGAGTCCATAATCTAACTCAAACTTCTGTTCAATTGAGTTAGACTTGTCATGTTGTTCCTTTTTTTAGTATTTTCTAGTTAGATTGAGTTAGGTGGTGGGTTGTCATATTGTTCTTTTTCTTAAAAAAAAAAAATCATATTTATTGACAACACAGAATTATTATTACATTAATAACCGCTCATAAAATTCAAATATCAAATATTTACAAATGAAACACAGCATTAGCATCGGTTAGAAACGTTAAATACTCTTTATGTATTTAGAAGTAAAGTAAGATATGTTGGAGGATGAAAGTTCCACGTCGGCTAATTCAGGGAATGATCATGGATTTATAAACAAAGAATACTCTCTCCATTGGTATGAGGTCTTTTGTGAAAGCCTAAACCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATTATACCATCGTGGAGAGTTCTGTTCGTCTAACAAGATAGGGTTGAGTTGTAACTCTATTTTCGGGTTGGTCAGGTTGACCTGACCACTCCAACCAAACTAAATAAAAAATCAACCCAACCCAATCTTTATATATTAGATTAGATAGTTCGAGATTGTTGAGTAAATTAAAAACGAGCAGACATCGATGGACGGGACGTTTTGAAGCTCACTTATGGGACAAAGGGTCATGGAATCCAACACAAAGGAAGAAAGGAAAGCAAGGTAAATTCAGGTTAACTTCATAAATATGGTGTTTATGGATGGCTAAGCTCATAACTTTTCTTGTTTGTGTTGTGATGGTGATGGTGATGATGATCACCCATTTGAAACAAATGGAACAGTTTATTTAGGTAAGTTTGTTAAAACGCAATTAAATTATATTTAAATATGATTAAAGTATGTAAATAAAAACATCTTATAAACGTGTTTAAATGAAAAATAGGAGCTTATGATGAAGAAGAATCAGCTGCTAGAGCATATGACTTAGCTGCACTCAAATATTGGGGAACCTCCACTTTCACTAATTTTTCGGTACCATTAAATTCTATTTAATTTTCTAATTTTTATTTTTTATATTCAAAATTATTTAATTTTCAGATTTTTATGGATCATTATTTTGTGCAGGTATCTGATTATGAGAAGGAGATTAAGATAATGAAAAGTGTGACAAAGGAGGAATACTTGGCCTCTTTAAGAAGGTGATTAAATCCAATAATTTACACTCTATTTAACAATTATCTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTGTTCGGATGAAAATTTAAAAAATTAACCAAAAAAAACCAACGAGTTATCGAGTTAGACTTCAATTTTACGAGTCTCGATAAGAAAAACTAACGTATAATACATTTTGGTTCCACTCCCTCTTGCAGGAGAAGCAGTGGTTTCTCTAGAGGTGTATCCAAATATCGAGGAGTTGCGAGGTAATATCACTCATAAACGTTTTTTTTTTTTTTAATTTCAACGATTCACATCTATTGGAGAGGGGAACAAAACATTCTTTATAAGAGTGTGGAAACCTATCACTAGTAAACGCATTTTAAAACCTTAAAGGGAAGCTCGGAAAGGAAATCTCAAATGATATCAAAACCACAAGGCGATGTGTCAGCGAGGAGGCTAAGCCCCGAAGGGGGTGGATTGTGAGATCCCACATCGATTTTTTTATAATCTTGAGGGGAAGTCGTCCAAAGAGGACTTATTTGCTAGCGGTGGGCTTGGACTATTATAGAAAAATTTGAACATCTACTCTTTCGACCGAACAAATTTGATATGAAGAGAGTCGATTTTGCAGACACCATCACAATGGGAGGTGGGAAGCAAGAATTGGAAGGGTATTTGGCAACAAGTATTTATACCTTGGAACTTACGGTGAGTATTTCAACTCCAAAATTTATTAATTTCCAATGGTTCATAAGGGTTAAGCGTTGATAACTTGTAGGTACACAAGAGGAGGCAGCGAGGGCATACGACATAGCAGCAATCGAATATAGAGGCCTCAACGCAGTGACCAACTTCGAGTTGAGCAGCTACATAAGGTGGCTTAACCCAAACCCAATGCAGCCTTCTCCACCATTGTCCTTTTCAATTGATACCAATACTACAAGTAATAGCGCATTTATTCCGACTGCCCCACGAACGTCCCCTCGCACAGCGCTTGGCCTTCTCCTCAAGTCGTCCCTCTTCAAACACCTTATGGAGAAGAACGTTGTAAACGTCAATGGAGATGCCGAAATGGAAGAGGAGTACCCCATGGATGAAGGTAGAGCGCTACTCTCCTTTGTTGATCCTAATCCTTACTTGCACTTGCAATATTCATGTCAAGGAACCACCAACTTATCACTCTCCACCCCTTTTCATTACTTCGCTTTGGTTTGA

mRNA sequence

ATGGACTTTACAGTTCTAAATTCAGAGTTCTGTTCTTTCAAAACTGATTCCGTGGCCGTCAACTGCATAAGGAGACGGCGGAGAAGCTGCAAGGGAAGCCGTCAACCACCCAAGTCAGCGGCAGATCAATCCACTGCCACAAAAAGAAGCTCCAGGTTTCGTGGAGTTAGCAGACATCGATGGACGGGACGTTTTGAAGCTCACTTATGGGACAAAGGGTCATGGAATCCAACACAAAGGAAGAAAGGAAAGCAAGGAGAAGCAGTGGTTTCTCTAGAGGTGTATCCAAATATCGAGGAGTTGCGAGGTACACAAGAGGAGGCAGCGAGGGCATACGACATAGCAGCAATCGAATATAGAGGCCTCAACGCAGTGACCAACTTCGAGTTGAGCAGCTACATAAGGTGGCTTAACCCAAACCCAATGCAGCCTTCTCCACCATTGTCCTTTTCAATTGATACCAATACTACAAGTAATAGCGCATTTATTCCGACTGCCCCACGAACGTCCCCTCGCACAGCGCTTGGCCTTCTCCTCAAGTCGTCCCTCTTCAAACACCTTATGGAGAAGAACGTTGTAAACGTCAATGGAGATGCCGAAATGGAAGAGGAGTACCCCATGGATGAAGGTAGAGCGCTACTCTCCTTTGTTGATCCTAATCCTTACTTGCACTTGCAATATTCATGTCAAGGAACCACCAACTTATCACTCTCCACCCCTTTTCATTACTTCGCTTTGGTTTGA

Coding sequence (CDS)

ATGGACTTTACAGTTCTAAATTCAGAGTTCTGTTCTTTCAAAACTGATTCCGTGGCCGTCAACTGCATAAGGAGACGGCGGAGAAGCTGCAAGGGAAGCCGTCAACCACCCAAGTCAGCGGCAGATCAATCCACTGCCACAAAAAGAAGCTCCAGGTTTCGTGGAGTTAGCAGACATCGATGGACGGGACGTTTTGAAGCTCACTTATGGGACAAAGGGTCATGGAATCCAACACAAAGGAAGAAAGGAAAGCAAGGAGAAGCAGTGGTTTCTCTAGAGGTGTATCCAAATATCGAGGAGTTGCGAGGTACACAAGAGGAGGCAGCGAGGGCATACGACATAGCAGCAATCGAATATAGAGGCCTCAACGCAGTGACCAACTTCGAGTTGAGCAGCTACATAAGGTGGCTTAACCCAAACCCAATGCAGCCTTCTCCACCATTGTCCTTTTCAATTGATACCAATACTACAAGTAATAGCGCATTTATTCCGACTGCCCCACGAACGTCCCCTCGCACAGCGCTTGGCCTTCTCCTCAAGTCGTCCCTCTTCAAACACCTTATGGAGAAGAACGTTGTAAACGTCAATGGAGATGCCGAAATGGAAGAGGAGTACCCCATGGATGAAGGTAGAGCGCTACTCTCCTTTGTTGATCCTAATCCTTACTTGCACTTGCAATATTCATGTCAAGGAACCACCAACTTATCACTCTCCACCCCTTTTCATTACTTCGCTTTGGTTTGA

Protein sequence

MDFTVLNSEFCSFKTDSVAVNCIRRRRRSCKGSRQPPKSAADQSTATKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGEAVVSLEVYPNIEELRGTQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLNPNPMQPSPPLSFSIDTNTTSNSAFIPTAPRTSPRTALGLLLKSSLFKHLMEKNVVNVNGDAEMEEEYPMDEGRALLSFVDPNPYLHLQYSCQGTTNLSLSTPFHYFALV
Homology
[Close]
BLAST of CmaCh05G009270 vs. Swiss-Prot
Match: AP2L3_ARATH (AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thaliana GN=At1g79700 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-18
Identity = 55/119 (46.22%), Postives = 74/119 (62.18%), Query Frame = 1 

Query: 15  TDSVAVNCIRRRRRSCKGSRQPPKSAADQSTATKRSSRFRGVSRHRWTGRFEAHLWDKGS 74
           ++S ++    +R+R     + PP++A  Q     RSS +RGV+RHRWTGR+EAHLWDK S
Sbjct: 25  SESASIALTSKRKR-----KSPPRNAPLQ-----RSSPYRGVTRHRWTGRYEAHLWDKNS 84

Query: 75  WNPTQRKKGKQGEAVVSLEVYPNIEELRGTQEEAARAYDIAAIEYRGLNAVTNFELSSY 134
           WN TQ KKG+Q    V L  Y         +E AARAYD+AA++Y G + + NF L SY
Sbjct: 85  WNDTQTKKGRQ----VYLGAYDE-------EEAAARAYDLAALKYWGRDTLLNFPLPSY 122

[Close]
BLAST of CmaCh05G009270 vs. Swiss-Prot
Match: AP2L4_ARATH (AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana GN=At2g41710 PE=2 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 3.3e-18
Identity = 54/115 (46.96%), Postives = 69/115 (60.00%), Query Frame = 1 

Query: 25  RRRRSCKG----SRQPPKSAADQSTATKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQR 84
           ++ R C      S+ PP       TA KRSS +RGV+RHRWTGR+EAHLWDK +WN  Q 
Sbjct: 45  KKERGCTAKERISKMPP------CTAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQN 104

Query: 85  KKGKQGEAVVSLEVYPNIEELRGTQEEAARAYDIAAIEYRGLNAVTNFELSSYIR 136
           KKGKQ    V L  Y +       +E AARAYD+AA++Y G   + NF ++ Y R
Sbjct: 105 KKGKQ----VYLGAYDD-------EEAAARAYDLAALKYWGPGTLINFPVTDYTR 142

[Close]
BLAST of CmaCh05G009270 vs. Swiss-Prot
Match: WRI1_ARATH (Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana GN=WRI1 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 7.3e-18
Identity = 55/115 (47.83%), Postives = 70/115 (60.87%), Query Frame = 1 

Query: 24  RRRRRSCKGSRQPPKSAADQSTA-TKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKK 83
           +R +R+ K S    KS    S A T+RSS +RGV+RHRWTGRFEAHLWDK SWN  Q KK
Sbjct: 36  KRAKRAKKSSPSGDKSHNPTSPASTRRSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKK 95

Query: 84  GKQGEAVVSLEVYPNIEELRGTQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWL 138
           GKQ    V L  Y        ++E AA  YD+AA++Y G + + NF   +Y + L
Sbjct: 96  GKQ----VYLGAY-------DSEEAAAHTYDLAALKYWGPDTILNFPAETYTKEL 139

[Close]
BLAST of CmaCh05G009270 vs. Swiss-Prot
Match: AP2L1_ARATH (AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thaliana GN=At1g16060 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 6.2e-17
Identity = 53/118 (44.92%), Postives = 69/118 (58.47%), Query Frame = 1 

Query: 16  DSVAVNCIRRRRRSCKGSRQPPKSAADQSTATKRSSRFRGVSRHRWTGRFEAHLWDKGSW 75
           D  A + + + +R     R  P+ A  Q     RSS  RGV+RHRWTGR+EAHLWDK SW
Sbjct: 30  DQSATSVVLKAKRK---RRSQPRDAPPQ-----RSSVHRGVTRHRWTGRYEAHLWDKNSW 89

Query: 76  NPTQRKKGKQGEAVVSLEVYPNIEELRGTQEEAARAYDIAAIEYRGLNAVTNFELSSY 134
           N TQ KKG+Q    V L  Y         ++ AARAYD+AA++Y G + + NF L +Y
Sbjct: 90  NETQTKKGRQ----VYLGAYDE-------EDAAARAYDLAALKYWGRDTILNFPLCNY 128

[Close]
BLAST of CmaCh05G009270 vs. Swiss-Prot
Match: AIL7_ARATH (AP2-like ethylene-responsive transcription factor AIL7 OS=Arabidopsis thaliana GN=AIL7 PE=2 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 8.3e-14
Identity = 44/93 (47.31%), Postives = 58/93 (62.37%), Query Frame = 1 

Query: 45  TATKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGEAVVSLEVYPNIEELRGT 104
           T  +R+S +RGV+RHRWTGR+EAHLWD       Q +KG+Q    V L  Y         
Sbjct: 224 TLGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQ----VYLGGYDK------- 283

Query: 105 QEEAARAYDIAAIEYRGLNAVTNFELSSYIRWL 138
           ++ AARAYD+AA++Y G  A TNF +SSY + L
Sbjct: 284 EDRAARAYDLAALKYWGSTATTNFPVSSYSKEL 305

[Close]
BLAST of CmaCh05G009270 vs. TrEMBL
Match: A0A0A0KJ57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404260 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.7e-43
Identity = 124/232 (53.45%), Postives = 141/232 (60.78%), Query Frame = 1 

Query: 51  SRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ-GEAVVSLEVYPNIEELRGTQEEAA 110
           SR+RGV+RH   GR+EA +             G+  G   + L  Y        TQEEAA
Sbjct: 160 SRYRGVARHHHNGRWEARI-------------GRVFGNKYLYLGTY-------STQEEAA 219

Query: 111 RAYDIAAIEYRGLNAVTNFELSSYIRWL----NPNPMQP-SPPLS---FSIDTNTTS--- 170
           RAYDIAAIEYRG+NAVTNF+LS+YIRWL    NPNP Q  SPP+S   F ID NT +   
Sbjct: 220 RAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQLSPPISSSLFPIDYNTNNTLK 279

Query: 171 ------------------NSAFIPTAPRTSPRTALGLLLKSSLFKHLMEKNVVNVNGDAE 230
                             N+  IPT P+TSPRTALGLLLKSSLFKHL+EKN+VNVN    
Sbjct: 280 SSNNDLHFPIFQSINNDDNNVIIPTNPQTSPRTALGLLLKSSLFKHLVEKNIVNVN---- 339

Query: 231 MEEEYPMD-EGRALLSFVDP---NPYLHLQYSCQGTTNLSLS-TPFHYFALV 248
            EEE P D E R LL FVD    NPY +L Y CQGTTNLSLS TPFH+  LV
Sbjct: 340 -EEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTTPFHFSTLV 366

[Close]
BLAST of CmaCh05G009270 vs. TrEMBL
Match: A0A162A1F1_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_017924 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 6.8e-31
Identity = 67/103 (65.05%), Postives = 82/103 (79.61%), Query Frame = 1 

Query: 38  KSAADQSTATKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGEAVVSLEVYPN 97
           +    + +  +RSS +RGV+RHRWTGR+EAHLWDK  WN +Q KKG+QG+AV  LE + N
Sbjct: 35  RKTVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGKAVDFLEEFRN 94

Query: 98  IEELRGTQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLNPN 141
            EELR TQEEAA AYD+AAIEYRGLNAVTNF+LS YI+WL P+
Sbjct: 95  TEELRATQEEAAVAYDMAAIEYRGLNAVTNFDLSRYIKWLRPD 137

[Close]
BLAST of CmaCh05G009270 vs. TrEMBL
Match: A0A0D2T889_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G182500 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.6e-25
Identity = 73/150 (48.67%), Postives = 87/150 (58.00%), Query Frame = 1 

Query: 1   MDFTVLNSEF-------CSFKTDSVAVNCIRRRRRSCKGS--------RQPPKSAADQST 60
           M+     SEF       C+ + +++   CI+RRRR             +Q  +   DQ T
Sbjct: 1   MEIVTAKSEFRPGRTRLCTAEDNAIDTKCIKRRRRDHSNGALGLSNQQQQHQQLQGDQPT 60

Query: 61  AT--KRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGEAVVSLEVYPNIEELRG 120
           AT  KRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQG                 
Sbjct: 61  ATTVKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQG--------------AYD 120

Query: 121 TQEEAARAYDIAAIEYRGLNAVTNFELSSY 134
            +E AARAYD+AAI+Y G +  TNF +S Y
Sbjct: 121 EEESAARAYDLAAIKYWGTSTFTNFPVSDY 136

[Close]
BLAST of CmaCh05G009270 vs. TrEMBL
Match: A0A061EIB6_THECC (Integrase-type DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_011797 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.8e-24
Identity = 67/133 (50.38%), Postives = 80/133 (60.15%), Query Frame = 1 

Query: 11  CSFKTDSVAVNCIRRRRRS-------C---KGSRQPPKSAADQSTATKRSSRFRGVSRHR 70
           C  + D++   CI+RRRR        C   +G +Q  +     +T  KRSSRFRGVSRHR
Sbjct: 18  CMAEGDNIETKCIKRRRRDPSTGSLGCYNQQGEQQQQQGDQPTATTVKRSSRFRGVSRHR 77

Query: 71  WTGRFEAHLWDKGSWNPTQRKKGKQGEAVVSLEVYPNIEELRGTQEEAARAYDIAAIEYR 130
           WTGRFEAHLWDK SWNPTQRKKGKQG                  +E AARAYD+AAI+Y 
Sbjct: 78  WTGRFEAHLWDKASWNPTQRKKGKQG--------------AYDEEESAARAYDLAAIKYW 136

Query: 131 GLNAVTNFELSSY 134
           G +  TNF +S Y
Sbjct: 138 GTSTFTNFPVSDY 136

[Close]
BLAST of CmaCh05G009270 vs. TrEMBL
Match: A0A068VCT8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00010788001 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.4e-23
Identity = 72/160 (45.00%), Postives = 90/160 (56.25%), Query Frame = 1 

Query: 1   MDFTVLNSE-------FCSFKTDSVAVNCIRRRRRSC--------------KGSRQPPKS 60
           M+ +++ SE       +C  ++D     C+RRRRRS               +  +QP   
Sbjct: 1   MELSIVKSEASARGRSYCLVESDVPETKCVRRRRRSPSALTVLTGEASPGGRDQQQPQIQ 60

Query: 61  AADQS------TATKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGEAVVSLE 120
             DQ+      T  KRSSRFRGVSRHRWTGRFEAHLWDK SWN TQ+KKGKQ    V L 
Sbjct: 61  QVDQNNGANATTTVKRSSRFRGVSRHRWTGRFEAHLWDKASWNATQKKKGKQ----VYLG 120

Query: 121 VYPNIEELRGTQEEAARAYDIAAIEYRGLNAVTNFELSSY 134
            Y         +E AARAYD+AAI+Y G++  TNF +S Y
Sbjct: 121 AYDE-------EEAAARAYDLAAIKYWGISTFTNFPISDY 149

[Close]
BLAST of CmaCh05G009270 vs. TAIR10
Match: AT1G79700.2 (AT1G79700.2 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 95.1 bits (235), Expect = 6.3e-20
Identity = 55/119 (46.22%), Postives = 74/119 (62.18%), Query Frame = 1 

Query: 15  TDSVAVNCIRRRRRSCKGSRQPPKSAADQSTATKRSSRFRGVSRHRWTGRFEAHLWDKGS 74
           ++S ++    +R+R     + PP++A  Q     RSS +RGV+RHRWTGR+EAHLWDK S
Sbjct: 25  SESASIALTSKRKR-----KSPPRNAPLQ-----RSSPYRGVTRHRWTGRYEAHLWDKNS 84

Query: 75  WNPTQRKKGKQGEAVVSLEVYPNIEELRGTQEEAARAYDIAAIEYRGLNAVTNFELSSY 134
           WN TQ KKG+Q    V L  Y         +E AARAYD+AA++Y G + + NF L SY
Sbjct: 85  WNDTQTKKGRQ----VYLGAYDE-------EEAAARAYDLAALKYWGRDTLLNFPLPSY 122

[Close]
BLAST of CmaCh05G009270 vs. TAIR10
Match: AT3G54320.1 (AT3G54320.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 92.4 bits (228), Expect = 4.1e-19
Identity = 55/115 (47.83%), Postives = 70/115 (60.87%), Query Frame = 1 

Query: 24  RRRRRSCKGSRQPPKSAADQSTA-TKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKK 83
           +R +R+ K S    KS    S A T+RSS +RGV+RHRWTGRFEAHLWDK SWN  Q KK
Sbjct: 36  KRAKRAKKSSPSGDKSHNPTSPASTRRSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKK 95

Query: 84  GKQGEAVVSLEVYPNIEELRGTQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWL 138
           GKQ    V L  Y        ++E AA  YD+AA++Y G + + NF   +Y + L
Sbjct: 96  GKQ----VYLGAY-------DSEEAAAHTYDLAALKYWGPDTILNFPAETYTKEL 139

[Close]
BLAST of CmaCh05G009270 vs. TAIR10
Match: AT1G16060.1 (AT1G16060.1 ARIA-interacting double AP2 domain protein)

HSP 1 Score: 89.4 bits (220), Expect = 3.5e-18
Identity = 53/118 (44.92%), Postives = 69/118 (58.47%), Query Frame = 1 

Query: 16  DSVAVNCIRRRRRSCKGSRQPPKSAADQSTATKRSSRFRGVSRHRWTGRFEAHLWDKGSW 75
           D  A + + + +R     R  P+ A  Q     RSS  RGV+RHRWTGR+EAHLWDK SW
Sbjct: 30  DQSATSVVLKAKRK---RRSQPRDAPPQ-----RSSVHRGVTRHRWTGRYEAHLWDKNSW 89

Query: 76  NPTQRKKGKQGEAVVSLEVYPNIEELRGTQEEAARAYDIAAIEYRGLNAVTNFELSSY 134
           N TQ KKG+Q    V L  Y         ++ AARAYD+AA++Y G + + NF L +Y
Sbjct: 90  NETQTKKGRQ----VYLGAYDE-------EDAAARAYDLAALKYWGRDTILNFPLCNY 128

[Close]
BLAST of CmaCh05G009270 vs. TAIR10
Match: AT2G41710.3 (AT2G41710.3 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 82.0 bits (201), Expect = 5.5e-16
Identity = 41/80 (51.25%), Postives = 52/80 (65.00%), Query Frame = 1 

Query: 56  VSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGEAVVSLEVYPNIEELRGTQEEAARAYDIA 115
           +SRHRWTGR+EAHLWDK +WN  Q KKGKQ    V L  Y +       +E AARAYD+A
Sbjct: 109 MSRHRWTGRYEAHLWDKSTWNQNQNKKGKQ----VYLGAYDD-------EEAAARAYDLA 168

Query: 116 AIEYRGLNAVTNFELSSYIR 136
           A++Y G   + NF ++ Y R
Sbjct: 169 ALKYWGPGTLINFPVTDYTR 177

[Close]
BLAST of CmaCh05G009270 vs. TAIR10
Match: AT5G65510.1 (AT5G65510.1 AINTEGUMENTA-like 7)

HSP 1 Score: 79.0 bits (193), Expect = 4.7e-15
Identity = 44/93 (47.31%), Postives = 58/93 (62.37%), Query Frame = 1 

Query: 45  TATKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGEAVVSLEVYPNIEELRGT 104
           T  +R+S +RGV+RHRWTGR+EAHLWD       Q +KG+Q    V L  Y         
Sbjct: 224 TLGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQ----VYLGGYDK------- 283

Query: 105 QEEAARAYDIAAIEYRGLNAVTNFELSSYIRWL 138
           ++ AARAYD+AA++Y G  A TNF +SSY + L
Sbjct: 284 EDRAARAYDLAALKYWGSTATTNFPVSSYSKEL 305

[Close]
BLAST of CmaCh05G009270 vs. NCBI nr
Match: gi|700192607|gb|KGN47811.1| (hypothetical protein Csa_6G404260 [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 3.8e-43
Identity = 124/232 (53.45%), Postives = 141/232 (60.78%), Query Frame = 1 

Query: 51  SRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ-GEAVVSLEVYPNIEELRGTQEEAA 110
           SR+RGV+RH   GR+EA +             G+  G   + L  Y        TQEEAA
Sbjct: 160 SRYRGVARHHHNGRWEARI-------------GRVFGNKYLYLGTY-------STQEEAA 219

Query: 111 RAYDIAAIEYRGLNAVTNFELSSYIRWL----NPNPMQP-SPPLS---FSIDTNTTS--- 170
           RAYDIAAIEYRG+NAVTNF+LS+YIRWL    NPNP Q  SPP+S   F ID NT +   
Sbjct: 220 RAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQLSPPISSSLFPIDYNTNNTLK 279

Query: 171 ------------------NSAFIPTAPRTSPRTALGLLLKSSLFKHLMEKNVVNVNGDAE 230
                             N+  IPT P+TSPRTALGLLLKSSLFKHL+EKN+VNVN    
Sbjct: 280 SSNNDLHFPIFQSINNDDNNVIIPTNPQTSPRTALGLLLKSSLFKHLVEKNIVNVN---- 339

Query: 231 MEEEYPMD-EGRALLSFVDP---NPYLHLQYSCQGTTNLSLS-TPFHYFALV 248
            EEE P D E R LL FVD    NPY +L Y CQGTTNLSLS TPFH+  LV
Sbjct: 340 -EEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTTPFHFSTLV 366

[Close]
BLAST of CmaCh05G009270 vs. NCBI nr
Match: gi|659113887|ref|XP_008456799.1| (PREDICTED: AP2-like ethylene-responsive transcription factor At1g79700 [Cucumis melo])

HSP 1 Score: 174.9 bits (442), Expect = 1.8e-40
Identity = 119/236 (50.42%), Postives = 137/236 (58.05%), Query Frame = 1 

Query: 51  SRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ-GEAVVSLEVYPNIEELRGTQEEAA 110
           SR+RGV+RH   GR+EA +             G+  G   + L  Y        TQEEAA
Sbjct: 162 SRYRGVARHHHNGRWEARI-------------GRVFGNKYLYLGTY-------STQEEAA 221

Query: 111 RAYDIAAIEYRGLNAVTNFELSSYIRWL--------NPNPMQP-SPPLS---FSIDTNTT 170
           RAYDIAAIEYRG+NAVTNF+L++YIRWL        NPNP Q  SPP+    F ID NT 
Sbjct: 222 RAYDIAAIEYRGINAVTNFDLNTYIRWLKPQTNPNQNPNPKQQLSPPIISSLFPIDYNTD 281

Query: 171 S----------------------NSAFIPTAPRTSPRTALGLLLKSSLFKHLMEKNVVNV 230
           +                      N   IPT P+TSPRTALGLLLKSSLFKHL+EKN+VN 
Sbjct: 282 NTLKSSNKDLRFPIFQSINNDHDNDVIIPTTPQTSPRTALGLLLKSSLFKHLVEKNIVNA 341

Query: 231 NGDAEMEEEYPMD-EGRALLSFVDP--NPYLHLQYSCQGTTNLSLS-TPFHYFALV 248
           N     EEE P D E R LL FVD   NPY +L Y C GTTNLSLS TPFH+  L+
Sbjct: 342 NN----EEEDPKDNEVRGLLDFVDDSNNPYFNLHYPCLGTTNLSLSTTPFHFSTLI 373

[Close]
BLAST of CmaCh05G009270 vs. NCBI nr
Match: gi|778722287|ref|XP_011658453.1| (PREDICTED: ethylene-responsive transcription factor WRI1-like [Cucumis sativus])

HSP 1 Score: 143.3 bits (360), Expect = 5.7e-31
Identity = 81/143 (56.64%), Postives = 96/143 (67.13%), Query Frame = 1 

Query: 1   MDFTVLNSEFCSFKTDSVA-VNCIRRRRRSCK---------GSRQPPKSAADQSTATKRS 60
           M+  V+NSE CS K+DS+A V  ++RRRR+           G  QP K   +QSTATKRS
Sbjct: 1   MELGVVNSELCSLKSDSMAAVKGVKRRRRNASSSSPTVGGGGDGQPHKLMPNQSTATKRS 60

Query: 61  SRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGEAVVSLEVYPNIEELRGTQEEAAR 120
           S+FRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ    V L  Y         +E AAR
Sbjct: 61  SKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ----VYLGAYDE-------EESAAR 120

Query: 121 AYDIAAIEYRGLNAVTNFELSSY 134
           AYD+AA++Y G +  TNF +S Y
Sbjct: 121 AYDLAALKYWGTSTFTNFSISDY 132

[Close]
BLAST of CmaCh05G009270 vs. NCBI nr
Match: gi|1021036899|gb|KZM94682.1| (hypothetical protein DCAR_017924 [Daucus carota subsp. sativus])

HSP 1 Score: 142.5 bits (358), Expect = 9.8e-31
Identity = 67/103 (65.05%), Postives = 82/103 (79.61%), Query Frame = 1 

Query: 38  KSAADQSTATKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGEAVVSLEVYPN 97
           +    + +  +RSS +RGV+RHRWTGR+EAHLWDK  WN +Q KKG+QG+AV  LE + N
Sbjct: 35  RKTVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGKAVDFLEEFRN 94

Query: 98  IEELRGTQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLNPN 141
            EELR TQEEAA AYD+AAIEYRGLNAVTNF+LS YI+WL P+
Sbjct: 95  TEELRATQEEAAVAYDMAAIEYRGLNAVTNFDLSRYIKWLRPD 137

[Close]
BLAST of CmaCh05G009270 vs. NCBI nr
Match: gi|823201435|ref|XP_012435571.1| (PREDICTED: AP2-like ethylene-responsive transcription factor At1g79700 [Gossypium raimondii])

HSP 1 Score: 123.6 bits (309), Expect = 4.7e-25
Identity = 75/150 (50.00%), Postives = 89/150 (59.33%), Query Frame = 1 

Query: 1   MDFTVLNSEF-------CSFKTDSVAVNCIRRRRRSCKGS--------RQPPKSAADQST 60
           M+     SEF       C+ + +++   CI+RRRR             +Q  +   DQ T
Sbjct: 1   MEIVTAKSEFRPGRTRLCTAEDNAIDTKCIKRRRRDHSNGALGLSNQQQQHQQLQGDQPT 60

Query: 61  AT--KRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGEAVVSLEVYPNIEELRG 120
           AT  KRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ    V L  Y        
Sbjct: 61  ATTVKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ----VYLGAYDE------ 120

Query: 121 TQEEAARAYDIAAIEYRGLNAVTNFELSSY 134
            +E AARAYD+AAI+Y G +  TNF +S Y
Sbjct: 121 -EESAARAYDLAAIKYWGTSTFTNFPVSDY 139

The following BLAST results are available for this feature:
BLAST of CmaCh05G009270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AP2L3_ARATH1.1e-1846.22AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thali... [more]
AP2L4_ARATH3.3e-1846.96AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thali... [more]
WRI1_ARATH7.3e-1847.83Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana GN=WRI1 PE... [more]
AP2L1_ARATH6.2e-1744.92AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thali... [more]
AIL7_ARATH8.3e-1447.31AP2-like ethylene-responsive transcription factor AIL7 OS=Arabidopsis thaliana G... [more]
BLAST of CmaCh05G009270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJ57_CUCSA2.7e-4353.45Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404260 PE=4 SV=1[more]
A0A162A1F1_DAUCA6.8e-3165.05Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_017924 PE=4 SV=1[more]
A0A0D2T889_GOSRA5.6e-2548.67Uncharacterized protein OS=Gossypium raimondii GN=B456_008G182500 PE=4 SV=1[more]
A0A061EIB6_THECC2.8e-2450.38Integrase-type DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_011797 ... [more]
A0A068VCT8_COFCA2.4e-2345.00Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00010788001 PE=4 SV=1[more]
BLAST of CmaCh05G009270 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G79700.26.3e-2046.22 Integrase-type DNA-binding superfamily protein[more]
AT3G54320.14.1e-1947.83 Integrase-type DNA-binding superfamily protein[more]
AT1G16060.13.5e-1844.92 ARIA-interacting double AP2 domain protein[more]
AT2G41710.35.5e-1651.25 Integrase-type DNA-binding superfamily protein[more]
AT5G65510.14.7e-1547.31 AINTEGUMENTA-like 7[more]
BLAST of CmaCh05G009270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192607|gb|KGN47811.1|3.8e-4353.45hypothetical protein Csa_6G404260 [Cucumis sativus][more]
gi|659113887|ref|XP_008456799.1|1.8e-4050.42PREDICTED: AP2-like ethylene-responsive transcription factor At1g79700 [Cucumis ... [more]
gi|778722287|ref|XP_011658453.1|5.7e-3156.64PREDICTED: ethylene-responsive transcription factor WRI1-like [Cucumis sativus][more]
gi|1021036899|gb|KZM94682.1|9.8e-3165.05hypothetical protein DCAR_017924 [Daucus carota subsp. sativus][more]
gi|823201435|ref|XP_012435571.1|4.7e-2550.00PREDICTED: AP2-like ethylene-responsive transcription factor At1g79700 [Gossypiu... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0007275multicellular organism development
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh05G009270.1CmaCh05G009270.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 111..131
score: 1.1E-5coord: 53..64
score: 1.
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 104..130
score: 8.
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 52..135
score: 2.0
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 52..129
score: 13
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 51..130
score: 2.9
NoneNo IPR availablePANTHERPTHR32467:SF27SUBFAMILY NOT NAMEDcoord: 34..209
score: 2.6