CsaV3_6G012270 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G012270
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionCalcium-binding protein pbp1
Locationchr6 : 8434146 .. 8435350 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTAAATATTTTTTGGTTTTATTCTATTTTAAAAAAAAACGGGTAATCATTTTTTAAAATAAAAACATTTGAAAATATTTCAAACAAAAAAAAAAAATGGACATGAATCTAAAAATGTTACAAAACCCATTGTTTTTACTAAAAAAAAAATGGATTTGTTTCACTAAAAACACTCATTCATGACAGCATGTGTTAAAGCAAAGTAAGAAAAATGGTATAGTGTATGGAAAATGACGAGAATAGCCTAATCAAAGGTTCTAGGAAGGTGAGCTGCAATTTGCAAATAGAAGAAAAGAAGTCGGGCAACGTGAGAGAGAGTCTGTTCTGTTGCTGCGCTGTCATATGCTGAAGAGATCGCATCTCTCCAATTTCTCCGTCTTTTCTTACTTTCCTATCTTTCCACCTTATAAATTTAATTTCCTCTCCACCCAAAGTTTCGCACAATTTCAACCAAAATTCTCATACCCCAAATAAAAAAAAAAAAAAAAATTAAATGTCGAAAAAGGGTGGTGCTAATTTCCAGGATTTGCTTCCGGTAATGGCAGAGAAATTGGGGGGAGAGGGGCTGATAAAGGAGCTGTGTAATGGTTTTGAAGTACTGATGGACAAAGAGAAAGGGGTGATCACATTGGAGAGCCTTAGGAGAAACTCTTGGCTTTTGGGTGTGCGTGACATGGCTGAGGAAGAGCTTCTTAGCATGATGAGGGAAGGCGACTTGGATGGCGATGGCGCTTTGAATCAAATGGAGTTTTGTGTTTTGATGTTCAGATTAAGCCCTGACTTGATGCAACACTCTTTGTATTGGCTTCAACTTGCTCTCGAAAACGAGTTTTAATTCAACCTTTTTTCATTTTCTTCTTCTTCTTCTTTTCTTTTTTTTTTTTCCCCTTTGGAAAGAGGATCGAAGTTCCAAAACTAGCGTCGTCCCCTGTCTGCCTTTCTACCTGAAGATGCACGCGCATGCCTGTGGGGAGTTCGATGAAATGATGTGGTTTCATTTTGAATTGAGGAATATAGGAAGCCGCTTCTGCCTTTAATTTCGTTTTATTCCAAGCGTTGCTATTCTACTTTGTGTTATATAACTGCGAACTAGTAAATAATGAAAGGAATGGCAAAGTTATTATTATTTTCTTATGCAAGAAACTACCTTTACTTTTCTTAGTTCTAAAGTTTCTAAATTATAGAAGGATAAACTCCAAGAAAAA

mRNA sequence

ATGTCGAAAAAGGGTGGTGCTAATTTCCAGGATTTGCTTCCGGTAATGGCAGAGAAATTGGGGGGAGAGGGGCTGATAAAGGAGCTGTGTAATGGTTTTGAAGTACTGATGGACAAAGAGAAAGGGGTGATCACATTGGAGAGCCTTAGGAGAAACTCTTGGCTTTTGGGTGTGCGTGACATGGCTGAGGAAGAGCTTCTTAGCATGATGAGGGAAGGCGACTTGGATGGCGATGGCGCTTTGAATCAAATGGAGTTTTGTGTTTTGATGTTCAGATTAAGCCCTGACTTGATGCAACACTCTTTGTATTGGCTTCAACTTGCTCTCGAAAACGAGTTTTAA

Coding sequence (CDS)

ATGTCGAAAAAGGGTGGTGCTAATTTCCAGGATTTGCTTCCGGTAATGGCAGAGAAATTGGGGGGAGAGGGGCTGATAAAGGAGCTGTGTAATGGTTTTGAAGTACTGATGGACAAAGAGAAAGGGGTGATCACATTGGAGAGCCTTAGGAGAAACTCTTGGCTTTTGGGTGTGCGTGACATGGCTGAGGAAGAGCTTCTTAGCATGATGAGGGAAGGCGACTTGGATGGCGATGGCGCTTTGAATCAAATGGAGTTTTGTGTTTTGATGTTCAGATTAAGCCCTGACTTGATGCAACACTCTTTGTATTGGCTTCAACTTGCTCTCGAAAACGAGTTTTAA

Protein sequence

MSKKGGANFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRDMAEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENEF
Homology
[Close]
BLAST of CsaV3_6G012270 vs. NCBI nr
Match: XP_004140055.1 (PREDICTED: calcium-binding protein PBP1-like [Cucumis sativus] >KGN46674.1 hypothetical protein Csa_6G120930 [Cucumis sativus])

HSP 1 Score: 229.6 bits (584), Expect = 5.5e-57
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MSKKGGANFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRD 60
           MSKKGGANFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRD
Sbjct: 1   MSKKGGANFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRD 60

Query: 61  MAEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENEF 114
           MAEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENEF
Sbjct: 61  MAEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENEF 113

[Close]
BLAST of CsaV3_6G012270 vs. NCBI nr
Match: XP_023512862.1 (calcium-binding protein PBP1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.5 bits (467), Expect = 2.0e-43
Identity = 91/109 (83.49%), Postives = 97/109 (88.99%), Query Frame = 0 

Query: 5   GGANFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRDMAEE 64
           GG  F DLLPVMAEKLGGEGLI ELCNGF++LMDKEKGVITLESLR NS LLG+ DM EE
Sbjct: 7   GGGGFHDLLPVMAEKLGGEGLINELCNGFQMLMDKEKGVITLESLRTNSSLLGLWDMGEE 66

Query: 65  ELLSMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENEF 114
           EL+SMMREGDLDGDGALNQMEFCVLMFRLSP+LM+ SLYWL  ALE EF
Sbjct: 67  ELVSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLDDALEKEF 115

[Close]
BLAST of CsaV3_6G012270 vs. NCBI nr
Match: XP_022944617.1 (calcium-binding protein PBP1-like [Cucurbita moschata])

HSP 1 Score: 179.9 bits (455), Expect = 5.0e-42
Identity = 89/103 (86.41%), Postives = 95/103 (92.23%), Query Frame = 0 

Query: 11  DLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRDMAEEELLSMM 70
           DLLPVMAEKLGGEGLI ELCNGF++LMDKEKGVITLESLRRNS LLG+ DM EEEL+SMM
Sbjct: 16  DLLPVMAEKLGGEGLINELCNGFQMLMDKEKGVITLESLRRNSSLLGLWDMGEEELVSMM 75

Query: 71  REGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENEF 114
           REGDLDGDGALNQMEFCVLMFRLSP+LM+ SLYWL  ALE EF
Sbjct: 76  REGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLDDALEKEF 118

[Close]
BLAST of CsaV3_6G012270 vs. NCBI nr
Match: XP_022986403.1 (calcium-binding protein PBP1-like [Cucurbita maxima])

HSP 1 Score: 179.9 bits (455), Expect = 5.0e-42
Identity = 89/103 (86.41%), Postives = 95/103 (92.23%), Query Frame = 0 

Query: 11  DLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRDMAEEELLSMM 70
           DLLPVMAEKLGGEGLI ELCNGF++LMDKEKGVITLESLRRNS LLG+ DM EEEL+SMM
Sbjct: 17  DLLPVMAEKLGGEGLINELCNGFQMLMDKEKGVITLESLRRNSSLLGLWDMGEEELVSMM 76

Query: 71  REGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENEF 114
           REGDLDGDGALNQMEFCVLMFRLSP+LM+ SLYWL  ALE EF
Sbjct: 77  REGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLDDALEKEF 119

[Close]
BLAST of CsaV3_6G012270 vs. NCBI nr
Match: ACU16258.1 (unknown [Glycine max])

HSP 1 Score: 174.9 bits (442), Expect = 1.6e-40
Identity = 83/107 (77.57%), Postives = 98/107 (91.59%), Query Frame = 0 

Query: 6   GANFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRDMAEEE 65
           G  F+DLLPVMA KLGGEGL+KELCNGFE+L+DKEKGVITLESLRRN+ LLG++D+ E+E
Sbjct: 3   GIGFEDLLPVMANKLGGEGLMKELCNGFELLVDKEKGVITLESLRRNAALLGLQDLKEDE 62

Query: 66  LLSMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENE 113
           L+SMMREGDLDGDGAL QMEFCVLMFRLSPDLM+ S +WL+ AL++E
Sbjct: 63  LVSMMREGDLDGDGALTQMEFCVLMFRLSPDLMEESWFWLEEALQHE 109

[Close]
BLAST of CsaV3_6G012270 vs. TAIR10
Match: AT4G27280.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 139.4 bits (350), Expect = 1.4e-33
Identity = 70/107 (65.42%), Postives = 84/107 (78.50%), Query Frame = 0 

Query: 8   NFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRN-SWLLGVRDMAEEEL 67
           NF D LP MA  LGGEGLI ELCNGFE+LMD+EKGVIT ESLRRN + +LG+ D+ +E++
Sbjct: 18  NFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDEDV 77

Query: 68  LSMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENEF 114
             M++EGD D DGALNQMEFCVLMFRLSPDLM+ S   +   +E EF
Sbjct: 78  RCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

[Close]
BLAST of CsaV3_6G012270 vs. TAIR10
Match: AT5G54490.1 (pinoid-binding protein 1)

HSP 1 Score: 135.2 bits (339), Expect = 2.5e-32
Identity = 67/106 (63.21%), Postives = 83/106 (78.30%), Query Frame = 0 

Query: 9   FQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRN-SWLLGVRDMAEEELL 68
           FQD  P MA KLGGEGLI+E+C GFE+LMDK+KGVIT ESLRRN S +LG+ D+ ++++ 
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 69  SMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENEF 114
            M+ EGD D DGALNQMEFCVLMFRLSP+LM+ S   +   +E EF
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]
BLAST of CsaV3_6G012270 vs. TAIR10
Match: AT2G46600.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 128.3 bits (321), Expect = 3.1e-30
Identity = 60/104 (57.69%), Postives = 79/104 (75.96%), Query Frame = 0 

Query: 9   FQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRDMAEEELLS 68
           ++D+LPVMAEK+  E  + ELC GF +L D E+ +IT ESLRRNS +LG+  M++E+   
Sbjct: 22  YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81

Query: 69  MMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENE 113
           M+REGDLDGDGALNQ EFCVLM RLSP++M+ +  WL+ AL  E
Sbjct: 82  MVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125

[Close]
BLAST of CsaV3_6G012270 vs. TAIR10
Match: AT3G51920.1 (calmodulin 9)

HSP 1 Score: 48.1 bits (113), Expect = 4.1e-06
Identity = 32/90 (35.56%), Postives = 43/90 (47.78%), Query Frame = 0 

Query: 5   GGANFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRDMAEE 64
           GG  F D L +MA+    E    EL   F V      G+I+   L      +G++ +  E
Sbjct: 62  GGITFDDFLYIMAQNTSQESASDELIEVFRVFDRDGDGLISQLELGEGMKDMGMK-ITAE 121

Query: 65  ELLSMMREGDLDGDGALNQMEFCVLMFRLS 95
           E   M+RE DLDGDG L+  EF  +M   S
Sbjct: 122 EAEHMVREADLDGDGFLSFHEFSKMMIAAS 150

[Close]
BLAST of CsaV3_6G012270 vs. TAIR10
Match: AT4G23650.1 (calcium-dependent protein kinase 6)

HSP 1 Score: 45.4 bits (106), Expect = 2.7e-05
Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 0 

Query: 13  LPVMAEKLGGEGLI--KELCNGFEVLMDKEKGVITLESLRRNSWLLGVRDMAEEELLSMM 72
           L V+AE L  E +I  KE+   F+ L     G++TLE LR     LG + ++E E+  +M
Sbjct: 369 LKVIAENLSEEEIIGLKEM---FKSLDTDNNGIVTLEELRTGLPKLGSK-ISEAEIRQLM 428

Query: 73  REGDLDGDGALNQMEF 87
              D+DGDG+++ +EF
Sbjct: 429 EAADMDGDGSIDYLEF 440

[Close]
BLAST of CsaV3_6G012270 vs. Swiss-Prot
Match: sp|O81831|CARP1_ARATH (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.4e-32
Identity = 70/107 (65.42%), Postives = 84/107 (78.50%), Query Frame = 0 

Query: 8   NFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRN-SWLLGVRDMAEEEL 67
           NF D LP MA  LGGEGLI ELCNGFE+LMD+EKGVIT ESLRRN + +LG+ D+ +E++
Sbjct: 18  NFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDEDV 77

Query: 68  LSMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENEF 114
             M++EGD D DGALNQMEFCVLMFRLSPDLM+ S   +   +E EF
Sbjct: 78  RCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

[Close]
BLAST of CsaV3_6G012270 vs. Swiss-Prot
Match: sp|Q9LSQ6|PBP1_ARATH (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 4.6e-31
Identity = 67/106 (63.21%), Postives = 83/106 (78.30%), Query Frame = 0 

Query: 9   FQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRN-SWLLGVRDMAEEELL 68
           FQD  P MA KLGGEGLI+E+C GFE+LMDK+KGVIT ESLRRN S +LG+ D+ ++++ 
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 69  SMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENEF 114
            M+ EGD D DGALNQMEFCVLMFRLSP+LM+ S   +   +E EF
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]
BLAST of CsaV3_6G012270 vs. Swiss-Prot
Match: sp|Q9ZPX9|KIC_ARATH (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 5.6e-29
Identity = 60/104 (57.69%), Postives = 79/104 (75.96%), Query Frame = 0 

Query: 9   FQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRDMAEEELLS 68
           ++D+LPVMAEK+  E  + ELC GF +L D E+ +IT ESLRRNS +LG+  M++E+   
Sbjct: 22  YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81

Query: 69  MMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENE 113
           M+REGDLDGDGALNQ EFCVLM RLSP++M+ +  WL+ AL  E
Sbjct: 82  MVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125

[Close]
BLAST of CsaV3_6G012270 vs. Swiss-Prot
Match: sp|O74435|CDC31_SCHPO (Cell division control protein 31 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cdc31 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.7e-07
Identity = 32/87 (36.78%), Postives = 51/87 (58.62%), Query Frame = 0 

Query: 4   KGGANFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRDMAE 63
           KG    +D + VM EK+     ++E+   FE+  D E G I+L +LRR +  L   ++ +
Sbjct: 87  KGYLQMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELN-ENIDD 146

Query: 64  EELLSMMREGDLDGDGALNQMEFCVLM 91
           +EL +M+ E DLD DG +N+ EF  +M
Sbjct: 147 QELEAMIEEFDLDQDGEINEQEFIAIM 172

[Close]
BLAST of CsaV3_6G012270 vs. Swiss-Prot
Match: sp|O15182|CETN3_HUMAN (Centrin-3 OS=Homo sapiens OX=9606 GN=CETN3 PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06
Identity = 31/86 (36.05%), Postives = 50/86 (58.14%), Query Frame = 0 

Query: 5   GGANFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRDMAEE 64
           G   F+D   V+ + +      +E+   F++  D + G I+L +LRR +  LG  +M++E
Sbjct: 79  GKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELG-ENMSDE 138

Query: 65  ELLSMMREGDLDGDGALNQMEFCVLM 91
           EL +M+ E D DGDG +NQ EF  +M
Sbjct: 139 ELRAMIEEFDKDGDGEINQEEFIAIM 163

[Close]
BLAST of CsaV3_6G012270 vs. TrEMBL
Match: tr|A0A0A0KCV2|A0A0A0KCV2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G120930 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.6e-57
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MSKKGGANFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRD 60
           MSKKGGANFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRD
Sbjct: 1   MSKKGGANFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRD 60

Query: 61  MAEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENEF 114
           MAEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENEF
Sbjct: 61  MAEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENEF 113

[Close]
BLAST of CsaV3_6G012270 vs. TrEMBL
Match: tr|I1LRV1|I1LRV1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_12G103600 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.1e-40
Identity = 83/107 (77.57%), Postives = 98/107 (91.59%), Query Frame = 0 

Query: 6   GANFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRDMAEEE 65
           G  F+DLLPVMA KLGGEGL+KELCNGFE+L+DKEKGVITLESLRRN+ LLG++D+ E+E
Sbjct: 3   GIGFEDLLPVMANKLGGEGLMKELCNGFELLVDKEKGVITLESLRRNAALLGLQDLKEDE 62

Query: 66  LLSMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENE 113
           L+SMMREGDLDGDGAL QMEFCVLMFRLSPDLM+ S +WL+ AL++E
Sbjct: 63  LVSMMREGDLDGDGALTQMEFCVLMFRLSPDLMEESWFWLEEALQHE 109

[Close]
BLAST of CsaV3_6G012270 vs. TrEMBL
Match: tr|C6T3M0|C6T3M0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.1e-40
Identity = 83/107 (77.57%), Postives = 98/107 (91.59%), Query Frame = 0 

Query: 6   GANFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRDMAEEE 65
           G  F+DLLPVMA KLGGEGL+KELCNGFE+L+DKEKGVITLESLRRN+ LLG++D+ E+E
Sbjct: 3   GIGFEDLLPVMANKLGGEGLMKELCNGFELLVDKEKGVITLESLRRNAALLGLQDLKEDE 62

Query: 66  LLSMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENE 113
           L+SMMREGDLDGDGAL QMEFCVLMFRLSPDLM+ S +WL+ AL++E
Sbjct: 63  LVSMMREGDLDGDGALTQMEFCVLMFRLSPDLMEESWFWLEEALQHE 109

[Close]
BLAST of CsaV3_6G012270 vs. TrEMBL
Match: tr|A0A2P5AVV6|A0A2P5AVV6_9ROSA (Parvalbumin OS=Trema orientalis OX=63057 GN=TorRG33x02_339920 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.0e-40
Identity = 81/106 (76.42%), Postives = 99/106 (93.40%), Query Frame = 0 

Query: 7   ANFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRDMAEEEL 66
           ++F+DLLPVMAE+LGGEGLIKELC+GFE+LMDKE+G+ITLESLRRN+ +LG++DM E+EL
Sbjct: 25  SDFEDLLPVMAERLGGEGLIKELCSGFELLMDKERGLITLESLRRNAAVLGLQDMREDEL 84

Query: 67  LSMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENE 113
           +SM+REGDLDGDGALNQMEFCVLMFRLSPDLM+ S +WLQ  L+ E
Sbjct: 85  VSMLREGDLDGDGALNQMEFCVLMFRLSPDLMEDSWFWLQHVLQEE 130

[Close]
BLAST of CsaV3_6G012270 vs. TrEMBL
Match: tr|A0A2N9IXY8|A0A2N9IXY8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57002 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 6.9e-40
Identity = 81/107 (75.70%), Postives = 100/107 (93.46%), Query Frame = 0 

Query: 6   GANFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRDMAEEE 65
           GA F+DLLPVMA+KLGGEGLI+ELCNGF++LMDK+KGVITLESLR+NS LLG++D+ E+E
Sbjct: 7   GAIFEDLLPVMADKLGGEGLIRELCNGFQLLMDKDKGVITLESLRKNSRLLGLQDLKEDE 66

Query: 66  LLSMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENE 113
           L+SM++EGDLDGDGAL+QMEFCVLMFRLSP+LM+ S +WL+ ALE E
Sbjct: 67  LVSMVKEGDLDGDGALSQMEFCVLMFRLSPELMEESHFWLEEALEEE 113

The following BLAST results are available for this feature:
BLAST of CsaV3_6G012270 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140055.15.5e-57100.00PREDICTED: calcium-binding protein PBP1-like [Cucumis sativus] >KGN46674.1 hypot... [more]
XP_023512862.12.0e-4383.49calcium-binding protein PBP1-like [Cucurbita pepo subsp. pepo][more]
XP_022944617.15.0e-4286.41calcium-binding protein PBP1-like [Cucurbita moschata][more]
XP_022986403.15.0e-4286.41calcium-binding protein PBP1-like [Cucurbita maxima][more]
ACU16258.11.6e-4077.57unknown [Glycine max][more]
BLAST of CsaV3_6G012270 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27280.11.4e-3365.42Calcium-binding EF-hand family protein[more]
AT5G54490.12.5e-3263.21pinoid-binding protein 1[more]
AT2G46600.13.1e-3057.69Calcium-binding EF-hand family protein[more]
AT3G51920.14.1e-0635.56calmodulin 9[more]
AT4G23650.12.7e-0538.16calcium-dependent protein kinase 6[more]
BLAST of CsaV3_6G012270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O81831|CARP1_ARATH2.4e-3265.42Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1[more]
sp|Q9LSQ6|PBP1_ARATH4.6e-3163.21Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1[more]
sp|Q9ZPX9|KIC_ARATH5.6e-2957.69Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2[more]
sp|O74435|CDC31_SCHPO2.7e-0736.78Cell division control protein 31 OS=Schizosaccharomyces pombe (strain 972 / ATCC... [more]
sp|O15182|CETN3_HUMAN1.3e-0636.05Centrin-3 OS=Homo sapiens OX=9606 GN=CETN3 PE=1 SV=2[more]
BLAST of CsaV3_6G012270 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KCV2|A0A0A0KCV2_CUCSA3.6e-57100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G120930 PE=4 SV=1[more]
tr|I1LRV1|I1LRV1_SOYBN1.1e-4077.57Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_12G103600 PE=4 SV=1[more]
tr|C6T3M0|C6T3M0_SOYBN1.1e-4077.57Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1[more]
tr|A0A2P5AVV6|A0A2P5AVV6_9ROSA4.0e-4076.42Parvalbumin OS=Trema orientalis OX=63057 GN=TorRG33x02_339920 PE=4 SV=1[more]
tr|A0A2N9IXY8|A0A2N9IXY8_FAGSY6.9e-4075.70Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57002 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009060 aerobic respiration
biological_process GO:0051301 cell division
biological_process GO:0015994 chlorophyll metabolic process
biological_process GO:0048825 cotyledon development
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0008199 ferric iron binding
molecular_function GO:0004322 ferroxidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G012270.1CsaV3_6G012270.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 65..93
e-value: 0.0012
score: 28.1
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 40..92
e-value: 2.3E-16
score: 59.2
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 61..96
score: 10.608
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 6..113
e-value: 2.0E-21
score: 78.0
NoneNo IPR availablePANTHERPTHR44180:SF1SUBFAMILY NOT NAMEDcoord: 7..113
NoneNo IPR availablePANTHERPTHR44180FAMILY NOT NAMEDcoord: 7..113
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 74..86
IPR011992EF-hand domain pairSUPERFAMILYSSF47473EF-handcoord: 3..90

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G012270CSPI06G09830Wild cucumber (PI 183967)cpicucB364
CsaV3_6G012270Cucsa.119690Cucumber (Gy14) v1cgycucB159
CsaV3_6G012270CmaCh02G001360Cucurbita maxima (Rimu)cmacucB0764
CsaV3_6G012270CmoCh20G005980Cucurbita moschata (Rifu)cmocucB0665
CsaV3_6G012270CmoCh02G001380Cucurbita moschata (Rifu)cmocucB0747
CsaV3_6G012270Cp4.1LG16g04730Cucurbita pepo (Zucchini)cpecucB0355
CsaV3_6G012270CsGy6G009950Cucumber (Gy14) v2cgybcucB298
CsaV3_6G012270Carg13555Silver-seed gourdcarcucB0028
CsaV3_6G012270Carg03155Silver-seed gourdcarcucB0372
CsaV3_6G012270Lsi10G008480Bottle gourd (USVL1VR-Ls)cuclsiB432
CsaV3_6G012270Cla97C02G036990Watermelon (97103) v2cucwmbB449
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G012270Melon (DHL92) v3.5.1cucmeB431
CsaV3_6G012270Melon (DHL92) v3.5.1cucmeB453
CsaV3_6G012270Melon (DHL92) v3.6.1cucmedB421
CsaV3_6G012270Melon (DHL92) v3.6.1cucmedB444
CsaV3_6G012270Wax gourdcucwgoB621
CsaV3_6G012270Wax gourdcucwgoB639