CsaV3_6G010150 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCTTCCTCTCTTTTCTTTCAATGCCCAACGGAGTTCTACTACTACTAATTCCCGTCGGAAGCCTACTAAATTCATCAAAACAACCACCCTCAATAATGCTTCCGCCACACCCCACAACATCACTCCCCCGTGTTCCGAATGCGGCAAGAAATTCTGTTCATGGAAGGCTCTTTTCGGCCACATGCGCTGCCATCCCGAGCGTCAATGGCGAGGAATCAACCCACCCCCTATTTTCCTCCATCCTCCCTCCGCCGCTCAACTAGATCATGAAATCGCTACCTCTTTGATCATGCTCTCAAATGCCCCACCGGACCCCGGACGTGGAACTTCAGAGGGCAGAGAAGCAGTGGTAGTTTGTGAGCACAAACCAAGGGCACATTCTGGATTATTGGACTTGAATTTGCCTCCTCCAATGGAGGAGATTGAACAGGAATCTTCATCTCCCTATTCATCAGGGATTGTTTTGGATCTCAGATTGGGGCTTAATTAATTCAACCATTTTTACATTTCTTTTCTTCTTATTTCCTCCAAATAGGGAAAAACAAGAGTTTGTGGTAAGTATTACACTAATTAATTAACTAGGAAGGACAAACGTGTGAAGTCAATTCAGCAATCTATAACTCAAACAATTATTATACATTCTGATTCTTTTCAATAAATTTTATGTATACTAATATCATTTCCATTCCTTATATAACTGGGGTTGGACACTAACATATATAATATAACATAAAGTGTATAGATTTTCTGTGGTTTATGTTTTCAGTTTTGTTTTTGTTTGTGGATTTCATAACAACGTAACCTCCTTTTGCCTACTATTTAGAAACTGTACGACCATGGGGCTAGGAATTTTTGGATACACAACACAGGTCCTCTAGGATGTTTGGCTCAGAATGTTGTTAAATTTGGACCTGACCCATCAAAGCTTGATGAGTTTGGATTCGTCAGTTCACACAACCAAGCAGCCAAGCTCTTCAATCTACAACTCCGTTGCTCATTGTTAAAATGTGATGGCAACGTACGTCACATACATTGATATGATCTACTCGATCAAATCAAATCTTATTGCCAATCATTCACGATTGGATCGACGCTAATCTTCTGTATAGATTTTGTCTCATTTTCTATTAATCTTGTCTAATCTGATGACTTGTTACATTTTGTGTGTATATATGGCAGGGTTTAAACAACCTATATCATGGCTTGCTGTGTCTATGGATGGAGGTCCACCTCTTAATTACTACAGTGGAATCATATGTGGAGAAACAAATACCTTGGACGGGACGTTTACACTAA ATGGATCTTCCTCTCTTTTCTTTCAATGCCCAACGGAGTTCTACTACTACTAATTCCCGTCGGAAGCCTACTAAATTCATCAAAACAACCACCCTCAATAATGCTTCCGCCACACCCCACAACATCACTCCCCCGTGTTCCGAATGCGGCAAGAAATTCTGTTCATGGAAGGCTCTTTTCGGCCACATGCGCTGCCATCCCGAGCGTCAATGGCGAGGAATCAACCCACCCCCTATTTTCCTCCATCCTCCCTCCGCCGCTCAACTAGATCATGAAATCGCTACCTCTTTGATCATGCTCTCAAATGCCCCACCGGACCCCGGACGTGGAACTTCAGAGGGCAGAGAAGCAGTGGTAGTTTGTGAGCACAAACCAAGGGCACATTCTGGATTATTGGACTTGAATTTGCCTCCTCCAATGGAGGAGATTGAACAGGAATCTTCATCTCCCTATTCATCAGGGATTAAACTGTACGACCATGGGGCTAGGAATTTTTGGATACACAACACAGGTCCTCTAGGATGTTTGGCTCAGAATGTTGTTAAATTTGGACCTGACCCATCAAAGCTTGATGAGTTTGGATTCGTCAGTTCACACAACCAAGCAGCCAAGCTCTTCAATCTACAACTCCGTTGCTCATTGTTAAAATGTGATGGCAACGGTTTAAACAACCTATATCATGGCTTGCTGTGTCTATGGATGGAGGTCCACCTCTTAATTACTACAGTGGAATCATATGTGGAGAAACAAATACCTTGGACGGGACGTTTACACTAA ATGGATCTTCCTCTCTTTTCTTTCAATGCCCAACGGAGTTCTACTACTACTAATTCCCGTCGGAAGCCTACTAAATTCATCAAAACAACCACCCTCAATAATGCTTCCGCCACACCCCACAACATCACTCCCCCGTGTTCCGAATGCGGCAAGAAATTCTGTTCATGGAAGGCTCTTTTCGGCCACATGCGCTGCCATCCCGAGCGTCAATGGCGAGGAATCAACCCACCCCCTATTTTCCTCCATCCTCCCTCCGCCGCTCAACTAGATCATGAAATCGCTACCTCTTTGATCATGCTCTCAAATGCCCCACCGGACCCCGGACGTGGAACTTCAGAGGGCAGAGAAGCAGTGGTAGTTTGTGAGCACAAACCAAGGGCACATTCTGGATTATTGGACTTGAATTTGCCTCCTCCAATGGAGGAGATTGAACAGGAATCTTCATCTCCCTATTCATCAGGGATTAAACTGTACGACCATGGGGCTAGGAATTTTTGGATACACAACACAGGTCCTCTAGGATGTTTGGCTCAGAATGTTGTTAAATTTGGACCTGACCCATCAAAGCTTGATGAGTTTGGATTCGTCAGTTCACACAACCAAGCAGCCAAGCTCTTCAATCTACAACTCCGTTGCTCATTGTTAAAATGTGATGGCAACGGTTTAAACAACCTATATCATGGCTTGCTGTGTCTATGGATGGAGGTCCACCTCTTAATTACTACAGTGGAATCATATGTGGAGAAACAAATACCTTGGACGGGACGTTTACACTAA MDLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALFGHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPPDPGRGTSEGREAVVVCEHKPRAHSGLLDLNLPPPMEEIEQESSSPYSSGIKLYDHGARNFWIHNTGPLGCLAQNVVKFGPDPSKLDEFGFVSSHNQAAKLFNLQLRCSLLKCDGNGLNNLYHGLLCLWMEVHLLITTVESYVEKQIPWTGRLH
BLAST of CsaV3_6G010150 vs. NCBI nr
Match: XP_004140060.1 (PREDICTED: zinc finger protein ZAT3 [Cucumis sativus] >KGN46658.1 hypothetical protein Csa_6G118360 [Cucumis sativus]) HSP 1 Score: 329.3 bits (843), Expect = 1.2e-86 Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. NCBI nr
Match: XP_022944064.1 (zinc finger protein ZAT3-like [Cucurbita moschata]) HSP 1 Score: 135.2 bits (339), Expect = 3.2e-28 Identity = 88/165 (53.33%), Postives = 97/165 (58.79%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. NCBI nr
Match: XP_023512246.1 (zinc finger protein ZAT2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 131.3 bits (329), Expect = 4.6e-27 Identity = 82/179 (45.81%), Postives = 89/179 (49.72%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. NCBI nr
Match: XP_022986192.1 (zinc finger protein ZAT3-like [Cucurbita maxima]) HSP 1 Score: 129.0 bits (323), Expect = 2.3e-26 Identity = 92/208 (44.23%), Postives = 101/208 (48.56%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. NCBI nr
Match: XP_022937633.1 (GDSL esterase/lipase At1g54790-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 118.2 bits (295), Expect = 4.0e-23 Identity = 56/72 (77.78%), Postives = 58/72 (80.56%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. TAIR10
Match: AT1G54790.2 (GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 103.2 bits (256), Expect = 2.4e-22 Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. TAIR10
Match: AT4G35280.1 (C2H2-like zinc finger protein) HSP 1 Score: 98.6 bits (244), Expect = 6.0e-21 Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. TAIR10
Match: AT3G05180.1 (GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 97.4 bits (241), Expect = 1.3e-20 Identity = 47/61 (77.05%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. TAIR10
Match: AT2G17180.1 (C2H2-like zinc finger protein) HSP 1 Score: 81.6 bits (200), Expect = 7.6e-16 Identity = 48/123 (39.02%), Postives = 60/123 (48.78%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. TAIR10
Match: AT1G09390.1 (GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 62.0 bits (149), Expect = 6.2e-10 Identity = 38/82 (46.34%), Postives = 47/82 (57.32%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. Swiss-Prot
Match: sp|Q3ECP6|GDL22_ARATH (GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana OX=3702 GN=At1g54790 PE=2 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 4.4e-21 Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. Swiss-Prot
Match: sp|O65499|ZAT3_ARATH (Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.1e-19 Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. Swiss-Prot
Match: sp|Q9MAA1|GDL49_ARATH (GDSL esterase/lipase At3g05180 OS=Arabidopsis thaliana OX=3702 GN=At3g05180 PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.4e-19 Identity = 47/61 (77.05%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. Swiss-Prot
Match: sp|Q9SIJ0|ZAT2_ARATH (Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.4e-14 Identity = 48/123 (39.02%), Postives = 60/123 (48.78%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. Swiss-Prot
Match: sp|O80522|GDL2_ARATH (GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana OX=3702 GN=At1g09390 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08 Identity = 38/82 (46.34%), Postives = 47/82 (57.32%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. TrEMBL
Match: tr|A0A0A0KAW8|A0A0A0KAW8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G118360 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 7.6e-87 Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. TrEMBL
Match: tr|A0A1S3BZK6|A0A1S3BZK6_CUCME (GDSL esterase/lipase At1g54790-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495321 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.3e-22 Identity = 54/70 (77.14%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. TrEMBL
Match: tr|A0A1S3C007|A0A1S3C007_CUCME (GDSL esterase/lipase At1g54790-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495321 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.3e-22 Identity = 54/70 (77.14%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. TrEMBL
Match: tr|A0A0A0LGA7|A0A0A0LGA7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G020960 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.7e-22 Identity = 54/70 (77.14%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of CsaV3_6G010150 vs. TrEMBL
Match: tr|A0A2P5EIX3|A0A2P5EIX3_9ROSA (Lipase OS=Trema orientalis OX=63057 GN=TorRG33x02_186500 PE=3 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 3.3e-21 Identity = 53/72 (73.61%), Postives = 56/72 (77.78%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|