CsaV3_6G008810 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G008810
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Calcium-binding protein like
Location	chr6 : 7098650 .. 7102567 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTTCTAAATTTCATACAAATTCAGTAAAAACATCTTCTCGTATTAGGCAACAACCTTCCAAAATTTTCTAATCGAAAGATTATACATACGAGAAGTTAGCAAATGGTCCGCCCCATTTTTTAGAGCAATCAAACCAATATTATATTAGAGTATTAATTATATACACGTTTAGATCCGATTTTTTGAGTCGGTGAATGATAAAATATATATCCATTAACGGGAGTTTATAAAGGATAGACTCTATTCATAAAAAGGCACTAACTACTTCAATTTAACCTTTTCTTAAAGATAAAAATATCTTTTCTCTGTCACATTCATCTAAGACTTAACTATGGTTAGACTTAGACATTTAGTATAGGGAAATATTGTGTTCCCCCTTATGTCCTCCTTTTATATGTATTTTAGAGATTGTGGGTATCTTAGACAGGTAAGATTTGGATGATTTTGAGGGATGAGTTGACATCAAGAATTGCCCTTTTCCAACCAAACCAATCAATAAATCTTTATATATATATAATTCCCTCTTCATCTTAATTTCTCATCTTCAAGCAATGGATCAAAATCATAATACCTCAGGTAGAGTACTGGATGAAGGGTATGAAGACTTGTTGCCGGTGATGGCGCAGAAGCTCGACGTGGAGGTGTTTGTGGCCGAGCTTTGCAGCGGATTTCGGCTGCTTGCCGATGCAACAAAAGGGCTGATAACTGCCGAGAGTTTACGGCGGAATTCGGCACTTTTGGGAATGGAAGGGATGAACGAGAACGAAGCGGAGTCGATGGTGAGGGAAGGAGATCTTGATGGGGATGGAGCTCTTAATGAGATGGAATTTTGCATTTTAATGGTGAGACTTAGTCCAGGAATGATGGAGGATGCTGAGGCTTGGCTTCAAAAGGCAATTGATGAAGAGCTAGGTAAATCTTCTTGTTAGTAATTATATATATAATTGTCTTTGTAATTTATATTTGAACTGTAATAAAGTACTCAAATATCAGTGTAGTTGTTGATTAATGGTTTAATTATATGAGAAAGATTTGGGATCTCATGCCATAGTAATTAAGAACTGCTTATAGTTTAATTTGTATTATCATATATATGGTAAGAAAAATGTTTAGGTTATTCATCATAAACTTATTATTGCATCTACTCAAATTATGGTTTGAAACGTGGTAAACCTTTTTTTTTTCTTTTTACTTTCAAGTTTATTTTGTTATTATTTAGAGTTGGATATATACTAAACAATGGTTAATTTAGTAATATCCATTTGAGGTTGAGATTATGGTGAATATATATAAATGAAAATTGATACATGGAGTGGTTGTTTAGTAATCATTTTCTTTTATCAAATTAAGCCCAAAAACTGTTACTTTTATCTTCAAACTATTTATATTTGTTATCTACCTCTATCAATAGTTTAAAAAAATCCAAATTTAAAAACTAAAAAAATACATAATTTTTAAATTTTATTTTTTATTTTAAAATTTGACTCACAATTCATTTATTGTATTTAAGAAAAGTATAAATCAATATAAATTATACTTAATATTTTTTTTATAAAAAACAAGAATGAATTTTGATTACTAAATGTTGCCGGAAATAAACATTAGTTTCATTCACACTTTTTTTTTTCTTATCTAAAAAATCATTTATTGAGTTTGCTTCCATTTACATAGGGCACACTTTGGAAGTCTTTGTTTGACACTAGACTGCAATTTTTTTCTTTTTAGTGTCTAGTGTTCGAACTTATTTTACGTGCTTCGATTAATTTTATTAGACAACTCATTCGATCTTATGAATATCAACAAAACTTGTAAAATATTAATTCTTAATTAGGTAACGAGTGTGAGTGAAAGTTTACTATATTGTCAAAATTCTTTTATTATGATGTATATTGTCTACTCCAATACTCTTAATTGGAAGTCTTTATTTTAATCCTTTGTTTGCATCTTTTTTGTTTCTCCAAGCTTCACTTTTAACTCCTTTGTTATATTTATGGTGTATATCTATTCAACTCTTATCCTTGTATTTTTATTTAAAATATATATTTTAAAAAGAAAACTAATTTTTGTAAGATTTTATTGAAAAGTATCATTTTATCATTAAATTTTAAAATATTACACATTTTAGTGATTTCAATTTAGAAAGTTTATTGGTAAGTTATGGGCCAAATGAAAATTTTAAGTAAGACCTTTAAAATTTCATGAGATTTTGAAATAATTCCTAACAATAGCTAAACAAAACATAGATGGGTAAGAAAATTAACCATTTCAATAATAATAACATTAATGTTTATGTAATTGGGCCTACAATTGTGCACATGACTTCTGGGCTTTTATTGAGAAGTCAAGGCCTACTTCTACTATAATAATGTGGCTAACACTATATATATTAAACCTATTTAATTAGTCATTTTGAAAGAAAAAAAAGAATGTCACTTTTTTCTTTAAAAAAAATGGCTAAATCAAGAAAAATATTAATGGACCAAATTACCACTCATCCAAAATCAATAAACTACTGCCAAAACAAAACAAAGAAAGATCTTAAATCAAATCAAATCAAATATAATGCTATCTAAATTATAGAAAGTAAAACCTATAAAATTAAAGAGACAATATCTTCTAGTTCAAAATTAAAAGTCCTTCTAAATAATCTAAAATTACACAATAGGAAAAAAATCATATTATAGAGAGAAAAAAATCAATATAAAGAAAAAGTTTATGATTTGTCCAACTAAAATATGGAGTGTAGTATTGGATGAACACACAAAATAAGAAAGATCAACCAACGTATCTTGTAGAGTAATGTCAAAATGGTTTGTTTGTAAATCATTGGGATCAAGCCAAAAAATGACAAGAAGATAGCAAAGATTCGAATCAAAAAGTGACAACATAGAATCAAAATGAGTCTAAAAAAGGAAGTTCACTTGTTACATAGCGGATACCAAAACTCACCAAAATATGTGATGGGAAAGCCTTCTGTATAAAAAATAAATGGGATTTTTAAGTTGAGGTATCTTTACGAAACTAAAGTCACCTAGCAATTTTGTCAAAAATGCTATTTGATTTATGTGTATTTGTGTTGTTCTCCCTACTCTTAAGAAAAGGTAATTAAAAATTTTGATTGCAAAAATTGAAGCTTGTAGTTGGGCTAGATTGGAGAATGAGGTTGGGCTTACTATGGGAGAAAAATATAGAGTAACGATGGTACCTAACCTAAACAAATTCCCCCAACTTGTGCCAATTTTATTATCTTTCTAGTTGAATCTTTTTCTTCTTTTTCCAAATCAATCTAAGAAGGGCATGTTTGGATCATGATTGAAGTCGTATCCATCCTATGCTTGATTTGATAACACTATGTCTAATTAAACTATGTTTTTATATAGTATATCGTTGCGGGATGAATGATTGAACCTTCGACCTTTAGAGATGGTAGAGATTATATCAAAATGCTATTTAAGTTCACTTTTTAATTAAATTATGTTTATTTTAACAAGTGAAAAAGTTATTAAACACTAATTTAGGTAGAAGTGTATGGTGTGATCAGTTGAATTAAATTAATTCAACAAGCTGTCCAAAGCATATATATATATATATATAATTGGAGAGGAAAATGAAATGAAGTTTTTTTTTAAAAAATGAAAACATGGTCACATGACCTAATTGTAGAAGGCATTTAAGTGCTAATTAATAAAATGCAGGGAGTGATCTGATTTTTTCCACAAAATTTTGAAGATCCATTAAAGACAATAATTGAACCCTAAAAATTAGCCAACTAAAAAAATTGGGTCAATTCAGAAGTTGGATGCATGAATGGACCCTTTAACACTAATGTGAGAAATGGTCAAGTTTTTTTCTTTTTCTTTTTTTGTAGTTGAGACATCTCATTATTAAATTAAATTACATATTTAATTCTTATTG

mRNA sequence

ATGGATCAAAATCATAATACCTCAGGTAGAGTACTGGATGAAGGGTATGAAGACTTGTTGCCGGTGATGGCGCAGAAGCTCGACGTGGAGGTGTTTGTGGCCGAGCTTTGCAGCGGATTTCGGCTGCTTGCCGATGCAACAAAAGGGCTGATAACTGCCGAGAGTTTACGGCGGAATTCGGCACTTTTGGGAATGGAAGGGATGAACGAGAACGAAGCGGAGTCGATGGTGAGGGAAGGAGATCTTGATGGGGATGGAGCTCTTAATGAGATGGAATTTTGCATTTTAATGGTGAGACTTAGTCCAGGAATGATGGAGGATGCTGAGGCTTGGCTTCAAAAGGCAATTGATGAAGAGCTAGGTAAATCTTCTTGTTAG

Coding sequence (CDS)

ATGGATCAAAATCATAATACCTCAGGTAGAGTACTGGATGAAGGGTATGAAGACTTGTTGCCGGTGATGGCGCAGAAGCTCGACGTGGAGGTGTTTGTGGCCGAGCTTTGCAGCGGATTTCGGCTGCTTGCCGATGCAACAAAAGGGCTGATAACTGCCGAGAGTTTACGGCGGAATTCGGCACTTTTGGGAATGGAAGGGATGAACGAGAACGAAGCGGAGTCGATGGTGAGGGAAGGAGATCTTGATGGGGATGGAGCTCTTAATGAGATGGAATTTTGCATTTTAATGGTGAGACTTAGTCCAGGAATGATGGAGGATGCTGAGGCTTGGCTTCAAAAGGCAATTGATGAAGAGCTAGGTAAATCTTCTTGTTAG

Protein sequence

MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNSALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELGKSSC

Homology

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BLAST of CsaV3_6G008810 vs. NCBI nr
Match: XP_004140505.1 (PREDICTED: calcium-binding protein KIC [Cucumis sativus] >KGN46528.1 hypothetical protein Csa_6G106800 [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 7.4e-63
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNS 60
           MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNS
Sbjct: 1   MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNS 60

Query: 61  ALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120
           ALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL
Sbjct: 61  ALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120

Query: 121 GKSSC 126
           GKSSC
Sbjct: 121 GKSSC 125

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BLAST of CsaV3_6G008810 vs. NCBI nr
Match: XP_023547367.1 (calcium-binding protein KIC [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.1 bits (549), Expect = 6.9e-53
Identity = 110/125 (88.00%), Postives = 117/125 (93.60%), Query Frame = 0


Query: 1   MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNS 60
           MDQN +TS RV++E YEDLLPVMAQKLDVEVFVAELCSGFRLLADA+KG+ITAESLRRNS
Sbjct: 1   MDQNQHTSSRVVEE-YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRRNS 60

Query: 61  ALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120
           ALLGMEGM + EAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAE WLQKA+DEEL
Sbjct: 61  ALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEEL 120

Query: 121 GKSSC 126
            K SC
Sbjct: 121 SKVSC 124

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BLAST of CsaV3_6G008810 vs. NCBI nr
Match: XP_023006677.1 (calcium-binding protein KIC [Cucurbita maxima])

HSP 1 Score: 214.9 bits (546), Expect = 1.5e-52
Identity = 109/125 (87.20%), Postives = 117/125 (93.60%), Query Frame = 0


Query: 1   MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNS 60
           MDQN +TS RV++E YEDLLP+MAQKLDVEVFVAELCSGFRLLADA+KG+ITAESLRRNS
Sbjct: 1   MDQNQHTSSRVVEE-YEDLLPLMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRRNS 60

Query: 61  ALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120
           ALLGMEGM + EAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAE WLQKA+DEEL
Sbjct: 61  ALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEEL 120

Query: 121 GKSSC 126
            K SC
Sbjct: 121 SKVSC 124

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BLAST of CsaV3_6G008810 vs. NCBI nr
Match: XP_022958806.1 (calcium-binding protein KIC [Cucurbita moschata])

HSP 1 Score: 214.5 bits (545), Expect = 2.0e-52
Identity = 109/125 (87.20%), Postives = 117/125 (93.60%), Query Frame = 0


Query: 1   MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNS 60
           MDQN +TS RV++E YEDLLPVMAQKLDVEVFVAELCSGFRLLADA+KG+ITAESLR+NS
Sbjct: 1   MDQNQHTSSRVVEE-YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNS 60

Query: 61  ALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120
           ALLGMEGM + EAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAE WLQKA+DEEL
Sbjct: 61  ALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEEL 120

Query: 121 GKSSC 126
            K SC
Sbjct: 121 SKVSC 124

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BLAST of CsaV3_6G008810 vs. NCBI nr
Match: EOX95644.1 (Calcium-binding EF-hand family protein [Theobroma cacao])

HSP 1 Score: 184.9 bits (468), Expect = 1.7e-43
Identity = 92/109 (84.40%), Postives = 100/109 (91.74%), Query Frame = 0


Query: 16  YEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNSALLGMEGMNENEAES 75
           YEDLLPVMA+KLDVE FV+ELC GFRLLAD  +GLIT ESLRRNSALLGMEGM+++EAE 
Sbjct: 17  YEDLLPVMAEKLDVEAFVSELCGGFRLLADQERGLITPESLRRNSALLGMEGMSKDEAEG 76

Query: 76  MVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELGKSS 125
           MVREGDLDGDGALN+ EFCILMVRLSPGMMEDAE WLQKAID+EL KSS
Sbjct: 77  MVREGDLDGDGALNQTEFCILMVRLSPGMMEDAETWLQKAIDQELRKSS 125

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BLAST of CsaV3_6G008810 vs. TAIR10
Match: AT2G46600.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 162.5 bits (410), Expect = 1.6e-40
Identity = 78/114 (68.42%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 7   TSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNSALLGME 66
           TS   ++  YED+LPVMA+K+DVE FV+ELC GF LLAD  + LITAESLRRNS +LG+E
Sbjct: 13  TSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIE 72

Query: 67  GMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 121
           GM++ +A+ MVREGDLDGDGALN+ EFC+LMVRLSP MMEDAE WL+KA+ +EL
Sbjct: 73  GMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQEL 126

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BLAST of CsaV3_6G008810 vs. TAIR10
Match: AT4G27280.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 109.4 bits (272), Expect = 1.7e-24
Identity = 54/107 (50.47%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 16  YEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRN-SALLGMEGMNENEAE 75
           + D LP MA  L  E  + ELC+GF LL D  KG+IT ESLRRN +A+LG+  + + +  
Sbjct: 19  FHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDEDVR 78

Query: 76  SMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELG 122
            M++EGD D DGALN+MEFC+LM RLSP +ME +   + + I+EE G
Sbjct: 79  CMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEFG 125

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BLAST of CsaV3_6G008810 vs. TAIR10
Match: AT5G54490.1 (pinoid-binding protein 1)

HSP 1 Score: 105.1 bits (261), Expect = 3.1e-23
Identity = 52/105 (49.52%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 16  YEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRN-SALLGMEGMNENEAE 75
           ++D  P MA KL  E  + E+C GF LL D  KG+IT ESLRRN S +LG+  + +++  
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 76  SMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEE 120
            M+ EGD D DGALN+MEFC+LM RLSP +ME +   + + I+EE
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEE 123

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BLAST of CsaV3_6G008810 vs. TAIR10
Match: AT3G51920.1 (calmodulin 9)

HSP 1 Score: 50.4 bits (119), Expect = 9.1e-07
Identity = 34/86 (39.53%), Postives = 45/86 (52.33%), Query Frame = 0


Query: 16  YEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNSALLGMEGMNENEAES 75
           ++D L +MAQ    E    EL   FR+      GLI+   L      +GM+ +   EAE 
Sbjct: 66  FDDFLYIMAQNTSQESASDELIEVFRVFDRDGDGLISQLELGEGMKDMGMK-ITAEEAEH 125

Query: 76  MVREGDLDGDGALNEMEFCILMVRLS 102
           MVRE DLDGDG L+  EF  +M+  S
Sbjct: 126 MVREADLDGDGFLSFHEFSKMMIAAS 150

[Close]

BLAST of CsaV3_6G008810 vs. Swiss-Prot
Match: sp|Q9ZPX9|KIC_ARATH (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2)

HSP 1 Score: 162.5 bits (410), Expect = 3.0e-39
Identity = 78/114 (68.42%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 7   TSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNSALLGME 66
           TS   ++  YED+LPVMA+K+DVE FV+ELC GF LLAD  + LITAESLRRNS +LG+E
Sbjct: 13  TSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIE 72

Query: 67  GMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 121
           GM++ +A+ MVREGDLDGDGALN+ EFC+LMVRLSP MMEDAE WL+KA+ +EL
Sbjct: 73  GMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQEL 126

[Close]

BLAST of CsaV3_6G008810 vs. Swiss-Prot
Match: sp|O81831|CARP1_ARATH (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.0e-23
Identity = 54/107 (50.47%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 16  YEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRN-SALLGMEGMNENEAE 75
           + D LP MA  L  E  + ELC+GF LL D  KG+IT ESLRRN +A+LG+  + + +  
Sbjct: 19  FHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDEDVR 78

Query: 76  SMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELG 122
            M++EGD D DGALN+MEFC+LM RLSP +ME +   + + I+EE G
Sbjct: 79  CMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEFG 125

[Close]

BLAST of CsaV3_6G008810 vs. Swiss-Prot
Match: sp|Q9LSQ6|PBP1_ARATH (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.6e-22
Identity = 52/105 (49.52%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 16  YEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRN-SALLGMEGMNENEAE 75
           ++D  P MA KL  E  + E+C GF LL D  KG+IT ESLRRN S +LG+  + +++  
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 76  SMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEE 120
            M+ EGD D DGALN+MEFC+LM RLSP +ME +   + + I+EE
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEE 123

[Close]

BLAST of CsaV3_6G008810 vs. Swiss-Prot
Match: sp|Q8K4K1|CETN4_MOUSE (Centrin-4 OS=Mus musculus OX=10090 GN=Cetn4 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 9.6e-06
Identity = 29/85 (34.12%), Postives = 47/85 (55.29%), Query Frame = 0


Query: 17  EDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNSALLGMEGMNENEAESM 76
           ED   +M+ K+  +    E+   F+L  D   G I+  +++R +  LG E + E+E + M
Sbjct: 83  EDFFAIMSVKMSEKDEKEEILKAFKLFDDDATGSISLNNIKRVAKELG-ENLTEDELQEM 142

Query: 77  VREGDLDGDGALNEMEFCILMVRLS 102
           + E D DGDG +NE EF  +M + S
Sbjct: 143 LDEADRDGDGEINEEEFLKMMKKTS 166

[Close]

BLAST of CsaV3_6G008810 vs. Swiss-Prot
Match: sp|Q9S744|CML9_ARATH (Calmodulin-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=CML9 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.6e-05
Identity = 34/86 (39.53%), Postives = 45/86 (52.33%), Query Frame = 0


Query: 16  YEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNSALLGMEGMNENEAES 75
           ++D L +MAQ    E    EL   FR+      GLI+   L      +GM+ +   EAE 
Sbjct: 66  FDDFLYIMAQNTSQESASDELIEVFRVFDRDGDGLISQLELGEGMKDMGMK-ITAEEAEH 125

Query: 76  MVREGDLDGDGALNEMEFCILMVRLS 102
           MVRE DLDGDG L+  EF  +M+  S
Sbjct: 126 MVREADLDGDGFLSFHEFSKMMIAAS 150

[Close]

BLAST of CsaV3_6G008810 vs. TrEMBL
Match: tr|A0A0A0KAP2|A0A0A0KAP2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106800 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 4.9e-63
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNS 60
           MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNS
Sbjct: 1   MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNS 60

Query: 61  ALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120
           ALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL
Sbjct: 61  ALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120

Query: 121 GKSSC 126
           GKSSC
Sbjct: 121 GKSSC 125

[Close]

BLAST of CsaV3_6G008810 vs. TrEMBL
Match: tr|A0A061DS74|A0A061DS74_THECC (Calcium-binding EF-hand family protein OS=Theobroma cacao OX=3641 GN=TCM_005098 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.1e-43
Identity = 92/109 (84.40%), Postives = 100/109 (91.74%), Query Frame = 0


Query: 16  YEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNSALLGMEGMNENEAES 75
           YEDLLPVMA+KLDVE FV+ELC GFRLLAD  +GLIT ESLRRNSALLGMEGM+++EAE 
Sbjct: 17  YEDLLPVMAEKLDVEAFVSELCGGFRLLADQERGLITPESLRRNSALLGMEGMSKDEAEG 76

Query: 76  MVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELGKSS 125
           MVREGDLDGDGALN+ EFCILMVRLSPGMMEDAE WLQKAID+EL KSS
Sbjct: 77  MVREGDLDGDGALNQTEFCILMVRLSPGMMEDAETWLQKAIDQELRKSS 125

[Close]

BLAST of CsaV3_6G008810 vs. TrEMBL
Match: tr|C6TM17|C6TM17_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100801586 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.3e-43
Identity = 89/124 (71.77%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 1   MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNS 60
           M+ NH+     ++  +EDLLPVMA+KLDVE FV+ELC GF+LL+D   GLIT+ESLR NS
Sbjct: 1   MESNHSMRQNTMETEFEDLLPVMAEKLDVESFVSELCGGFKLLSDPETGLITSESLRTNS 60

Query: 61  ALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120
           ALLGMEGM++ +AE+MVR+GDLDGDG LNE EFCILMVRLSPGMMEDAE+WL+KAIDEEL
Sbjct: 61  ALLGMEGMSKEDAEAMVRQGDLDGDGKLNETEFCILMVRLSPGMMEDAESWLEKAIDEEL 120

Query: 121 GKSS 125
            KSS
Sbjct: 121 SKSS 124

[Close]

BLAST of CsaV3_6G008810 vs. TrEMBL
Match: tr|A0A1R3H1Y2|A0A1R3H1Y2_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_21921 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.2e-42
Identity = 91/108 (84.26%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 16  YEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNSALLGMEGMNENEAES 75
           YEDLLPVMA+KLDVE FV+ELC GFRLLAD   GLIT ESLRRNSALLGMEGM + EAE 
Sbjct: 13  YEDLLPVMAEKLDVEAFVSELCGGFRLLADQETGLITPESLRRNSALLGMEGMEKEEAEG 72

Query: 76  MVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELGKS 124
           MVREGDLDGDGALN+ EFCILMVRLSPGMMEDAE WLQKAID+EL KS
Sbjct: 73  MVREGDLDGDGALNQTEFCILMVRLSPGMMEDAETWLQKAIDQELRKS 120

[Close]

BLAST of CsaV3_6G008810 vs. TrEMBL
Match: tr|K7MES4|K7MES4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100802677 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.6e-42
Identity = 88/124 (70.97%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 1   MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNS 60
           M+ +HN     ++  +EDLLPVMA+KLDVE FV+ELC GF+LL+D   GLIT+ESLR NS
Sbjct: 1   MESSHNMRQSTMETEFEDLLPVMAEKLDVESFVSELCGGFKLLSDPETGLITSESLRTNS 60

Query: 61  ALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120
           ALLGMEGM++ +A++MVR+GDLDGDG LNE EFCILMVRLSPGMMEDAE+WL+KAIDEEL
Sbjct: 61  ALLGMEGMSKEDADAMVRQGDLDGDGKLNETEFCILMVRLSPGMMEDAESWLEKAIDEEL 120

Query: 121 GKSS 125
            KSS
Sbjct: 121 RKSS 124

The following BLAST results are available for this feature:

BLAST of CsaV3_6G008810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140505.1	7.4e-63	100.00	PREDICTED: calcium-binding protein KIC [Cucumis sativus] >KGN46528.1 hypothetica...	[more]
XP_023547367.1	6.9e-53	88.00	calcium-binding protein KIC [Cucurbita pepo subsp. pepo]	[more]
XP_023006677.1	1.5e-52	87.20	calcium-binding protein KIC [Cucurbita maxima]	[more]
XP_022958806.1	2.0e-52	87.20	calcium-binding protein KIC [Cucurbita moschata]	[more]
EOX95644.1	1.7e-43	84.40	Calcium-binding EF-hand family protein [Theobroma cacao]	[more]

BLAST of CsaV3_6G008810 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46600.1	1.6e-40	68.42	Calcium-binding EF-hand family protein	[more]
AT4G27280.1	1.7e-24	50.47	Calcium-binding EF-hand family protein	[more]
AT5G54490.1	3.1e-23	49.52	pinoid-binding protein 1	[more]
AT3G51920.1	9.1e-07	39.53	calmodulin 9	[more]

BLAST of CsaV3_6G008810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZPX9\|KIC_ARATH	3.0e-39	68.42	Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2	[more]
sp\|O81831\|CARP1_ARATH	3.0e-23	50.47	Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1	[more]
sp\|Q9LSQ6\|PBP1_ARATH	5.6e-22	49.52	Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1	[more]
sp\|Q8K4K1\|CETN4_MOUSE	9.6e-06	34.12	Centrin-4 OS=Mus musculus OX=10090 GN=Cetn4 PE=1 SV=1	[more]
sp\|Q9S744\|CML9_ARATH	1.6e-05	39.53	Calmodulin-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=CML9 PE=1 SV=1	[more]

BLAST of CsaV3_6G008810 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KAP2\|A0A0A0KAP2_CUCSA	4.9e-63	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106800 PE=4 SV=1	[more]
tr\|A0A061DS74\|A0A061DS74_THECC	1.1e-43	84.40	Calcium-binding EF-hand family protein OS=Theobroma cacao OX=3641 GN=TCM_005098 ...	[more]
tr\|C6TM17\|C6TM17_SOYBN	3.3e-43	71.77	Uncharacterized protein OS=Glycine max OX=3847 GN=100801586 PE=2 SV=1	[more]
tr\|A0A1R3H1Y2\|A0A1R3H1Y2_COCAP	1.2e-42	84.26	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_21921 PE=4 ...	[more]
tr\|K7MES4\|K7MES4_SOYBN	1.6e-42	70.97	Uncharacterized protein OS=Glycine max OX=3847 GN=100802677 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010091	trichome branching
biological_process	GO:0042744	hydrogen peroxide catabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G008810.1	CsaV3_6G008810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.238.10		coord: 14..124 e-value: 1.4E-22 score: 81.8
None	No IPR available	PANTHER	PTHR44180:SF7	CALCIUM-BINDING PROTEIN KIC	coord: 3..124
None	No IPR available	PANTHER	PTHR44180	FAMILY NOT NAMED	coord: 3..124
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 48..99 e-value: 1.7E-18 score: 66.0
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 68..103 score: 9.771
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 81..93
IPR011992	EF-hand domain pair	SUPERFAMILY	SSF47473	EF-hand	coord: 20..119

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G008810	CSPI06G08440	Wild cucumber (PI 183967)	cpicucB364
CsaV3_6G008810	Cucsa.120930	Cucumber (Gy14) v1	cgycucB159
CsaV3_6G008810	CmoCh17G004820	Cucurbita moschata (Rifu)	cmocucB0444
CsaV3_6G008810	Cp4.1LG12g04330	Cucurbita pepo (Zucchini)	cpecucB0176
CsaV3_6G008810	CsGy6G008520	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G008810	Carg26681	Silver-seed gourd	carcucB0938
CsaV3_6G008810	Cla006701	Watermelon (97103) v1	cucwmB570
CsaV3_6G008810	MELO3C022259	Melon (DHL92) v3.5.1	cucmeB446
CsaV3_6G008810	ClCG06G002680	Watermelon (Charleston Gray)	cucwcgB497
CsaV3_6G008810	Lsi09G016700	Bottle gourd (USVL1VR-Ls)	cuclsiB424
CsaV3_6G008810	MELO3C022259.2	Melon (DHL92) v3.6.1	cucmedB438
CsaV3_6G008810	Cla97C06G112040	Watermelon (97103) v2	cucwmbB487
CsaV3_6G008810	Bhi12G001958	Wax gourd	cucwgoB562

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G008810	Wax gourd	cucwgoB551
CsaV3_6G008810	Silver-seed gourd	carcucB0100
CsaV3_6G008810	Cucurbita maxima (Rimu)	cmacucB0451
CsaV3_6G008810	Cucurbita maxima (Rimu)	cmacucB1083
CsaV3_6G008810	Cucurbita moschata (Rifu)	cmocucB1065
CsaV3_6G008810	Bottle gourd (USVL1VR-Ls)	cuclsiB422