CmoCh17G004820 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G004820
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Calcium-binding EF-hand family protein
Location	Cmo_Chr17 : 3612779 .. 3614592 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAAAATCAACATACCTCAAGTAGAGTAGTTGAAGAGTACGAAGACTTGTTGCCAGTGATGGCGCAGAAGCTGGACGTTGAGGTGTTTGTGGCCGAGCTTTGCAGCGGTTTTCGACTGCTGGCCGATGCATCGAAAGGGGTGATAACAGCGGAGAGTTTACGGCAAAACTCGGCGTTGTTGGGAATGGAAGGGATGAAGAAGGAAGAAGCGGAGTCGATGGTGAGGGAAGGAGACCTTGATGGGGATGGAGCTCTCAATGAAATGGAATTTTGTATTTTGATGGTGAGGCTTAGCCCAGGAATGATGGAGGACGCTGAGGGTTGGCTTCAAAAGGCGCTTGATGAAGAATTAAGTAAAGTTTCTTGTTAGTGTTTTGCGTTCTTGGGATTGTAATTTATTGAATCGGTAATGATCTCAAATAACAGTGTACTTGTTTAATGGTTTAAGAACATGGGATCTGTTTGAAGTTTAATCTGAATTATAAGAATTGCTGATTTGATAATATCTGAATTTAGTGTTTTAAAACTATGTTTGTTTTCTTACCAGTTGTTTATGATGGGTTTTATGTTTCTTTTTTTTTTTTTCATTTTGTTTAAAACACAAATACTAGTGAGAACAAGGGCACGTGCAGAATGTCATCGTCATGCTCGTCTAGAGCGTGTTGCCCATGGCTGCATGCCTATACCAAGTCAAACCTTTTATGTTTTTACATATTACTTTTGTATTCCTAAGGGAGTATGTACTCTAGGGGGATATGACTTGACTAATTGTCAACTTCTCCCTACCAATAGTTATATACCGTGAGTCATTGTTGTTTTTTTTTTGCTTTCATATATAACACCAATTTCAATTTCTCACATCTTGCTCTCAAAACCTCTCTTTCGAAATCTCTCTCTGCCCCCGTTTTCTAAAACTTTCTTCTTGAATCGGGACCAGAAGCTCGAGCATACGTCACTTGCCCATAGACGATGCAAGAACGAATTGGTTTAACTCGCTTATTGCTGGAAAATGAGTGCAGCACAATCGTAAGTCCGCTGCCATCAAAAGTGCAATTGTGATACTTAGCCTCCATAATTGTGCTATCTTGGTTTCGGTCTCATGTCAATTTTTTCAACAATGAAAAGGTCATTAGATAGACAAACTGAACTTACAACCATAGTACATGTAAGTCTTTAATAAGTCAAATCAATTTAGATTTGTTCGCCCTAAGAATTGTCAAAAGCGCCAACATTTACAAAATTAGAGGTTGTAAGATCTTTGCAAACTTTCACAAATAAGATTAATTTAACAAATGATTTAAATAAGAGTTGAGAGAATGTATAAGTCTTAGATCGCCTTTAAATGTACGATGATTAATCTTAGATTTAAAGATGACTCGTTCAGGAATTAACTTGATCGAGACTAACCCAATGAATATGTTTAACTTCAAACCTAAAACAAAATTTGAAAAGAAAAGATAACATCAAAAGAAACACTGGAACTCATATTAAAAAGTGATTATCCAAGTTGAATAAAAGCTTTTAAATAGGCTAAAATTGTAATTCAATTGTGTTAATAGCTATTAAATGAAAATTGAAATAAATAAATAAGGCACATCAAAAAGTCCAAATGGTTATTAAAAACATTGTATTAAAAATTATTAAATGAAAATTGAATAAAATAAAGCTTATAACATGAAAATTCCATAATGGTAGTTCAACCTAACAAAGACAGAAGTCTTTAAAGTGGTTTCCGAAGGGTTATTTATTGTAACTTCATGCTCTACTTATCACTTTTCCCATTTGTAGCTTGTTATACTAGCATTATAA

mRNA sequence

ATGGATCAAAATCAACATACCTCAAGTAGAGTAGTTGAAGAGTACGAAGACTTGTTGCCAGTGATGGCGCAGAAGCTGGACGTTGAGGTGTTTGTGGCCGAGCTTTGCAGCGGTTTTCGACTGCTGGCCGATGCATCGAAAGGGGTGATAACAGCGGAGAGTTTACGGCAAAACTCGGCGTTGTTGGGAATGGAAGGGATGAAGAAGGAAGAAGCGGAGTCGATGGTGAGGGAAGGAGACCTTGATGGGGATGGAGCTCTCAATGAAATGGAATTTTGTATTTTGATGGTGAGGCTTAGCCCAGGAATGATGGAGGACGCTGAGGGTTGGCTTCAAAAGGCGCTTGATGAAGAATTAACATTATAA

Coding sequence (CDS)

ATGGATCAAAATCAACATACCTCAAGTAGAGTAGTTGAAGAGTACGAAGACTTGTTGCCAGTGATGGCGCAGAAGCTGGACGTTGAGGTGTTTGTGGCCGAGCTTTGCAGCGGTTTTCGACTGCTGGCCGATGCATCGAAAGGGGTGATAACAGCGGAGAGTTTACGGCAAAACTCGGCGTTGTTGGGAATGGAAGGGATGAAGAAGGAAGAAGCGGAGTCGATGGTGAGGGAAGGAGACCTTGATGGGGATGGAGCTCTCAATGAAATGGAATTTTGTATTTTGATGGTGAGGCTTAGCCCAGGAATGATGGAGGACGCTGAGGGTTGGCTTCAAAAGGCGCTTGATGAAGAATTAACATTATAA

Homology

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BLAST of CmoCh17G004820 vs. Swiss-Prot
Match: KIC_ARATH (Calcium-binding protein KIC OS=Arabidopsis thaliana GN=KIC PE=1 SV=2)

HSP 1 Score: 161.4 bits (407), Expect = 6.3e-39
Identity = 77/113 (68.14%), Postives = 98/113 (86.73%), Query Frame = 1


Query: 7   TSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEG 66
           +++++  +YED+LPVMA+K+DVE FV+ELC GF LLAD  + +ITAESLR+NS +LG+EG
Sbjct: 14  STTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEG 73

Query: 67  MKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEEL 120
           M KE+A+ MVREGDLDGDGALN+ EFC+LMVRLSP MMEDAE WL+KAL +EL
Sbjct: 74  MSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQEL 126

[Close]

BLAST of CmoCh17G004820 vs. Swiss-Prot
Match: PBP1_ARATH (Calcium-binding protein PBP1 OS=Arabidopsis thaliana GN=PBP1 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.9e-21
Identity = 51/106 (48.11%), Postives = 71/106 (66.98%), Query Frame = 1


Query: 14  EYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQN-SALLGMEGMKKEEA 73
           +++D  P MA KL  E  + E+C GF LL D  KGVIT ESLR+N S +LG+  +  ++ 
Sbjct: 18  QFQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDV 77

Query: 74  ESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEE 119
             M+ EGD D DGALN+MEFC+LM RLSP +ME +   + + ++EE
Sbjct: 78  RYMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEE 123

[Close]

BLAST of CmoCh17G004820 vs. Swiss-Prot
Match: CETN2_BOVIN (Centrin-2 OS=Bos taurus GN=CETN2 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-06
Identity = 31/86 (36.05%), Postives = 48/86 (55.81%), Query Frame = 1


Query: 15  YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAES 74
           + D L VM QK+  +    E+   F+L  D   G I+ ++L++ +  LG E +  EE + 
Sbjct: 86  FSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLSDEELQE 145

Query: 75  MVREGDLDGDGALNEMEFCILMVRLS 101
           M+ E D DGDG +NE EF  +M + S
Sbjct: 146 MIDEADRDGDGEVNEQEFLRIMKKTS 170

[Close]

BLAST of CmoCh17G004820 vs. Swiss-Prot
Match: CETN2_MOUSE (Centrin-2 OS=Mus musculus GN=Cetn2 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.4e-06
Identity = 31/86 (36.05%), Postives = 48/86 (55.81%), Query Frame = 1


Query: 15  YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAES 74
           + D L VM QK+  +    E+   F+L  D   G I+ ++L++ +  LG E +  EE + 
Sbjct: 86  FSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQE 145

Query: 75  MVREGDLDGDGALNEMEFCILMVRLS 101
           M+ E D DGDG +NE EF  +M + S
Sbjct: 146 MIDEADRDGDGEVNEQEFLRIMKKTS 170

[Close]

BLAST of CmoCh17G004820 vs. Swiss-Prot
Match: CETN1_HUMAN (Centrin-1 OS=Homo sapiens GN=CETN1 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.4e-06
Identity = 32/86 (37.21%), Postives = 48/86 (55.81%), Query Frame = 1


Query: 15  YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAES 74
           + D L VM QK+  +    E+   FRL  D   G I+ ++L++ +  LG E +  EE + 
Sbjct: 86  FNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELG-ENLTDEELQE 145

Query: 75  MVREGDLDGDGALNEMEFCILMVRLS 101
           M+ E D DGDG +NE EF  +M + S
Sbjct: 146 MIDEADRDGDGEVNEEEFLRIMKKTS 170

[Close]

BLAST of CmoCh17G004820 vs. TrEMBL
Match: A0A0A0KAP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106800 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.9e-50
Identity = 106/120 (88.33%), Postives = 114/120 (95.00%), Query Frame = 1


Query: 1   MDQNQHTSSRVVEE-YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNS 60
           MDQN +TS RV++E YEDLLPVMAQKLDVEVFVAELCSGFRLLADA+KG+ITAESLR+NS
Sbjct: 1   MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNS 60

Query: 61  ALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEEL 120
           ALLGMEGM + EAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAE WLQKA+DEEL
Sbjct: 61  ALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120

[Close]

BLAST of CmoCh17G004820 vs. TrEMBL
Match: A0A061DS74_THECC (Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_005098 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-42
Identity = 89/113 (78.76%), Postives = 99/113 (87.61%), Query Frame = 1


Query: 7   TSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEG 66
           T S    +YEDLLPVMA+KLDVE FV+ELC GFRLLAD  +G+IT ESLR+NSALLGMEG
Sbjct: 9   TPSTTTSQYEDLLPVMAEKLDVEAFVSELCGGFRLLADQERGLITPESLRRNSALLGMEG 68

Query: 67  MKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEEL 120
           M K+EAE MVREGDLDGDGALN+ EFCILMVRLSPGMMEDAE WLQKA+D+EL
Sbjct: 69  MSKDEAEGMVREGDLDGDGALNQTEFCILMVRLSPGMMEDAETWLQKAIDQEL 121

[Close]

BLAST of CmoCh17G004820 vs. TrEMBL
Match: A0A161YCW7_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022126 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.0e-40
Identity = 84/114 (73.68%), Postives = 99/114 (86.84%), Query Frame = 1


Query: 6   HTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGME 65
           H  +R  ++YEDLLPVMA+KLDVE FV+ELC GFRLLAD + G+IT+ESL++NS LLGME
Sbjct: 4   HRDTRSGDQYEDLLPVMAEKLDVEAFVSELCGGFRLLADPASGLITSESLKKNSGLLGME 63

Query: 66  GMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEEL 120
           GM KE+AE+MV+EGDLDGDG+LNE EFCILMVRLSPGMMEDAE WL KAL  E+
Sbjct: 64  GMSKEDAEAMVKEGDLDGDGSLNETEFCILMVRLSPGMMEDAEAWLDKALQHEV 117

[Close]

BLAST of CmoCh17G004820 vs. TrEMBL
Match: A0A0B2PAH4_GLYSO (Calcium-binding protein KIC OS=Glycine soja GN=glysoja_021168 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.0e-40
Identity = 87/121 (71.90%), Postives = 102/121 (84.30%), Query Frame = 1


Query: 1   MDQNQHTSSRVVE-EYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNS 60
           M+ N       +E E+EDLLPVMA+KLDVE FV+ELC GF+LL+D   G+IT+ESLR NS
Sbjct: 1   MESNHSMRQNTMETEFEDLLPVMAEKLDVESFVSELCGGFKLLSDPETGLITSESLRTNS 60

Query: 61  ALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEEL 120
           ALLGMEGM KE+AE+MVR+GDLDGDG LNE EFCILMVRLSPGMMEDAE WL+KA+DEEL
Sbjct: 61  ALLGMEGMSKEDAEAMVRQGDLDGDGKLNETEFCILMVRLSPGMMEDAESWLEKAIDEEL 120

[Close]

BLAST of CmoCh17G004820 vs. TrEMBL
Match: C6TM17_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G053300 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.0e-40
Identity = 87/121 (71.90%), Postives = 102/121 (84.30%), Query Frame = 1


Query: 1   MDQNQHTSSRVVE-EYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNS 60
           M+ N       +E E+EDLLPVMA+KLDVE FV+ELC GF+LL+D   G+IT+ESLR NS
Sbjct: 1   MESNHSMRQNTMETEFEDLLPVMAEKLDVESFVSELCGGFKLLSDPETGLITSESLRTNS 60

Query: 61  ALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEEL 120
           ALLGMEGM KE+AE+MVR+GDLDGDG LNE EFCILMVRLSPGMMEDAE WL+KA+DEEL
Sbjct: 61  ALLGMEGMSKEDAEAMVRQGDLDGDGKLNETEFCILMVRLSPGMMEDAESWLEKAIDEEL 120

[Close]

BLAST of CmoCh17G004820 vs. TAIR10
Match: AT2G46600.1 (AT2G46600.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 161.4 bits (407), Expect = 3.5e-40
Identity = 77/113 (68.14%), Postives = 98/113 (86.73%), Query Frame = 1


Query: 7   TSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEG 66
           +++++  +YED+LPVMA+K+DVE FV+ELC GF LLAD  + +ITAESLR+NS +LG+EG
Sbjct: 14  STTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEG 73

Query: 67  MKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEEL 120
           M KE+A+ MVREGDLDGDGALN+ EFC+LMVRLSP MMEDAE WL+KAL +EL
Sbjct: 74  MSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQEL 126

[Close]

BLAST of CmoCh17G004820 vs. TAIR10
Match: AT4G27280.1 (AT4G27280.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 104.8 bits (260), Expect = 3.9e-23
Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = 1


Query: 15  YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSA-LLGMEGMKKEEAE 74
           + D LP MA  L  E  + ELC+GF LL D  KGVIT ESLR+N+A +LG+  +  E+  
Sbjct: 19  FHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDEDVR 78

Query: 75  SMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEE 119
            M++EGD D DGALN+MEFC+LM RLSP +ME +   + + ++EE
Sbjct: 79  CMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEE 123

[Close]

BLAST of CmoCh17G004820 vs. TAIR10
Match: AT5G54490.1 (AT5G54490.1 pinoid-binding protein 1)

HSP 1 Score: 101.7 bits (252), Expect = 3.3e-22
Identity = 51/106 (48.11%), Postives = 71/106 (66.98%), Query Frame = 1


Query: 14  EYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQN-SALLGMEGMKKEEA 73
           +++D  P MA KL  E  + E+C GF LL D  KGVIT ESLR+N S +LG+  +  ++ 
Sbjct: 18  QFQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDV 77

Query: 74  ESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEE 119
             M+ EGD D DGALN+MEFC+LM RLSP +ME +   + + ++EE
Sbjct: 78  RYMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEE 123

[Close]

BLAST of CmoCh17G004820 vs. TAIR10
Match: AT3G51920.1 (AT3G51920.1 calmodulin 9)

HSP 1 Score: 52.0 bits (123), Expect = 3.0e-07
Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 1


Query: 15  YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAES 74
           ++D L +MAQ    E    EL   FR+      G+I+   L +    +GM+ +  EEAE 
Sbjct: 66  FDDFLYIMAQNTSQESASDELIEVFRVFDRDGDGLISQLELGEGMKDMGMK-ITAEEAEH 125

Query: 75  MVREGDLDGDGALNEMEFCILMVRLS 101
           MVRE DLDGDG L+  EF  +M+  S
Sbjct: 126 MVREADLDGDGFLSFHEFSKMMIAAS 150

[Close]

BLAST of CmoCh17G004820 vs. TAIR10
Match: AT4G14640.1 (AT4G14640.1 calmodulin 8)

HSP 1 Score: 50.1 bits (118), Expect = 1.1e-06
Identity = 31/86 (36.05%), Postives = 45/86 (52.33%), Query Frame = 1


Query: 14  EYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAE 73
           E+ + L +MA+KL       EL   F++      G I+A  L      LG E +  EE E
Sbjct: 66  EFAEFLNLMAKKLQESDAEEELKEAFKVFDKDQNGYISASELSHVMINLG-EKLTDEEVE 125

Query: 74  SMVREGDLDGDGALNEMEFCILMVRL 100
            M++E DLDGDG +N  EF  +M+ +
Sbjct: 126 QMIKEADLDGDGQVNYDEFVKMMINI 150

[Close]

BLAST of CmoCh17G004820 vs. NCBI nr
Match: gi|449445489|ref|XP_004140505.1| (PREDICTED: calcium-binding protein KIC [Cucumis sativus])

HSP 1 Score: 206.5 bits (524), Expect = 2.7e-50
Identity = 106/120 (88.33%), Postives = 114/120 (95.00%), Query Frame = 1


Query: 1   MDQNQHTSSRVVEE-YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNS 60
           MDQN +TS RV++E YEDLLPVMAQKLDVEVFVAELCSGFRLLADA+KG+ITAESLR+NS
Sbjct: 1   MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNS 60

Query: 61  ALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEEL 120
           ALLGMEGM + EAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAE WLQKA+DEEL
Sbjct: 61  ALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120

[Close]

BLAST of CmoCh17G004820 vs. NCBI nr
Match: gi|590721005|ref|XP_007051487.1| (Calcium-binding EF-hand family protein [Theobroma cacao])

HSP 1 Score: 180.6 bits (457), Expect = 1.6e-42
Identity = 89/113 (78.76%), Postives = 99/113 (87.61%), Query Frame = 1


Query: 7   TSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEG 66
           T S    +YEDLLPVMA+KLDVE FV+ELC GFRLLAD  +G+IT ESLR+NSALLGMEG
Sbjct: 9   TPSTTTSQYEDLLPVMAEKLDVEAFVSELCGGFRLLADQERGLITPESLRRNSALLGMEG 68

Query: 67  MKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEEL 120
           M K+EAE MVREGDLDGDGALN+ EFCILMVRLSPGMMEDAE WLQKA+D+EL
Sbjct: 69  MSKDEAEGMVREGDLDGDGALNQTEFCILMVRLSPGMMEDAETWLQKAIDQEL 121

[Close]

BLAST of CmoCh17G004820 vs. NCBI nr
Match: gi|470141855|ref|XP_004306641.1| (PREDICTED: calcium-binding protein KIC [Fragaria vesca subsp. vesca])

HSP 1 Score: 177.2 bits (448), Expect = 1.8e-41
Identity = 87/112 (77.68%), Postives = 100/112 (89.29%), Query Frame = 1


Query: 8   SSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGM 67
           S+    EY+DLLPVMA+KLDVE FV+ELC GFRLLAD  +G+IT+ESL++NSALLGMEGM
Sbjct: 3   SNGTTTEYQDLLPVMAEKLDVEAFVSELCGGFRLLADQERGLITSESLKKNSALLGMEGM 62

Query: 68  KKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEEL 120
            KE+AE MVREGDLDGDGAL+E EFCILMVRLSPGMMEDAE WL+KALD+EL
Sbjct: 63  SKEDAEGMVREGDLDGDGALSETEFCILMVRLSPGMMEDAETWLEKALDQEL 114

[Close]

BLAST of CmoCh17G004820 vs. NCBI nr
Match: gi|1009142463|ref|XP_015888736.1| (PREDICTED: calcium-binding protein KIC-like [Ziziphus jujuba])

HSP 1 Score: 175.6 bits (444), Expect = 5.1e-41
Identity = 88/121 (72.73%), Postives = 105/121 (86.78%), Query Frame = 1


Query: 1   MDQNQHTSSRVVE--EYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQN 60
           M+QNQ    ++    EYEDLLPVMA+KLDV+ F++ELC GF+LLA+  +G+ITA SLR+N
Sbjct: 5   MEQNQTGGGKISTSTEYEDLLPVMAEKLDVDNFMSELCKGFQLLAEPGRGLITAGSLRKN 64

Query: 61  SALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEE 120
           SALLGMEGM KE+AE+MVREGDLDGDGALNE EFCILMVRLSPGMMEDAE WL+KA+D+E
Sbjct: 65  SALLGMEGMSKEDAEAMVREGDLDGDGALNETEFCILMVRLSPGMMEDAEAWLEKAIDQE 124

[Close]

BLAST of CmoCh17G004820 vs. NCBI nr
Match: gi|657968923|ref|XP_008376175.1| (PREDICTED: calcium-binding protein KIC [Malus domestica])

HSP 1 Score: 175.6 bits (444), Expect = 5.1e-41
Identity = 87/116 (75.00%), Postives = 100/116 (86.21%), Query Frame = 1


Query: 4   NQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLG 63
           N    S    EY+DLLPVMA+KLDVE FV+ELC GFRLLAD  +G+IT+ESL++NSALLG
Sbjct: 6   NTSRKSTAPTEYQDLLPVMAEKLDVETFVSELCGGFRLLADPERGLITSESLKKNSALLG 65

Query: 64  MEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEEL 120
           MEGM KE+AE MVREGDLDGDGAL+E EFCILMVRLSPG+MEDAE WL+KALD+EL
Sbjct: 66  MEGMSKEDAEGMVREGDLDGDGALSETEFCILMVRLSPGIMEDAETWLEKALDQEL 121

The following BLAST results are available for this feature:

BLAST of CmoCh17G004820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
KIC_ARATH	6.3e-39	68.14	Calcium-binding protein KIC OS=Arabidopsis thaliana GN=KIC PE=1 SV=2	[more]
PBP1_ARATH	5.9e-21	48.11	Calcium-binding protein PBP1 OS=Arabidopsis thaliana GN=PBP1 PE=1 SV=1	[more]
CETN2_BOVIN	1.1e-06	36.05	Centrin-2 OS=Bos taurus GN=CETN2 PE=2 SV=1	[more]
CETN2_MOUSE	1.4e-06	36.05	Centrin-2 OS=Mus musculus GN=Cetn2 PE=1 SV=1	[more]
CETN1_HUMAN	1.4e-06	37.21	Centrin-1 OS=Homo sapiens GN=CETN1 PE=1 SV=1	[more]

BLAST of CmoCh17G004820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAP2_CUCSA	1.9e-50	88.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106800 PE=4 SV=1	[more]
A0A061DS74_THECC	1.1e-42	78.76	Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_005098 PE=4 SV=...	[more]
A0A161YCW7_DAUCA	1.0e-40	73.68	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022126 PE=4 SV=1	[more]
A0A0B2PAH4_GLYSO	1.0e-40	71.90	Calcium-binding protein KIC OS=Glycine soja GN=glysoja_021168 PE=4 SV=1	[more]
C6TM17_SOYBN	1.0e-40	71.90	Uncharacterized protein OS=Glycine max GN=GLYMA_07G053300 PE=2 SV=1	[more]

BLAST of CmoCh17G004820 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46600.1	3.5e-40	68.14	Calcium-binding EF-hand family protein	[more]
AT4G27280.1	3.9e-23	50.48	Calcium-binding EF-hand family protein	[more]
AT5G54490.1	3.3e-22	48.11	pinoid-binding protein 1	[more]
AT3G51920.1	3.0e-07	39.53	calmodulin 9	[more]
AT4G14640.1	1.1e-06	36.05	calmodulin 8	[more]

BLAST of CmoCh17G004820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445489\|ref\|XP_004140505.1\|	2.7e-50	88.33	PREDICTED: calcium-binding protein KIC [Cucumis sativus]	[more]
gi\|590721005\|ref\|XP_007051487.1\|	1.6e-42	78.76	Calcium-binding EF-hand family protein [Theobroma cacao]	[more]
gi\|470141855\|ref\|XP_004306641.1\|	1.8e-41	77.68	PREDICTED: calcium-binding protein KIC [Fragaria vesca subsp. vesca]	[more]
gi\|1009142463\|ref\|XP_015888736.1\|	5.1e-41	72.73	PREDICTED: calcium-binding protein KIC-like [Ziziphus jujuba]	[more]
gi\|657968923\|ref\|XP_008376175.1\|	5.1e-41	75.00	PREDICTED: calcium-binding protein KIC [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0010091	trichome branching
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G004820.1	CmoCh17G004820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 46..98 score: 6.5
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 67..102 score: 10
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 15..98 score: 2.4
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 20..119 score: 2.37
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 80..92 scor
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 14..120 score: 2.5
None	No IPR available	PANTHER	PTHR10891:SF624	CALCIUM-BINDING PROTEIN KIC	coord: 14..120 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G004820	Cucsa.120930	Cucumber (Gy14) v1	cgycmoB0292
CmoCh17G004820	Cla006701	Watermelon (97103) v1	cmowmB346
CmoCh17G004820	Csa6G106800	Cucumber (Chinese Long) v2	cmocuB369
CmoCh17G004820	MELO3C022259	Melon (DHL92) v3.5.1	cmomeB306
CmoCh17G004820	ClCG06G002680	Watermelon (Charleston Gray)	cmowcgB325
CmoCh17G004820	CSPI06G08440	Wild cucumber (PI 183967)	cmocpiB372
CmoCh17G004820	Lsi09G016700	Bottle gourd (USVL1VR-Ls)	cmolsiB320
CmoCh17G004820	Cp4.1LG12g04330	Cucurbita pepo (Zucchini)	cmocpeB335
CmoCh17G004820	MELO3C022259.2	Melon (DHL92) v3.6.1	cmomedB351
CmoCh17G004820	CsaV3_6G008810	Cucumber (Chinese Long) v3	cmocucB0444
CmoCh17G004820	Cla97C06G112040	Watermelon (97103) v2	cmowmbB361
CmoCh17G004820	Bhi12G001958	Wax gourd	cmowgoB0455
CmoCh17G004820	CsGy6G008520	Cucumber (Gy14) v2	cgybcmoB744
CmoCh17G004820	Carg26681	Silver-seed gourd	carcmoB1210

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G004820	Cucurbita maxima (Rimu)	cmacmoB353