CsaV3_6G000910 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G000910
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Reticulon-like protein
Location	chr6 : 601865 .. 604128 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTTGTTATGTGTCATAAAAGTTTCACCGCCACGTGGAAGGTCTCAAGCGTAAACAGCCGTCGTAGTTTGACACTCTGGCCTGGCCACGTACTGTAGAATTGCCACCTCGTTCATCCATTTATATAATAATTAAATTTCTTCACTTACTTTCTATTGCACTATCCATGGCGGACTCTTCAGAAACTGTACAACCCAAGGCGGTGGAAATCGCCGACGATAATATTAACAATGATCAACACCCCATTACTCCATCTCCCCCGCCATCCTCTAATTTCAACAAAATGGACCATTCTCTGCCACTTTCGCCGGAGGACGAGACGGCAGAGAGTTCTCAAATGTTAGAGAAAAAGCAACCTGTTCATCGTGTTCTTGGTGCTGGAAAGCGTACGGCTAATCCCTCTTTGTGTTTTTCCAATTCTTGTATTTTTTTTTTCATCTCTAAAAATGAGTGAAAATGTTTACAAAGTAGAACCAACTTTTATATTCTATGTTTATATTTCATACATAAATTATGATATTTTTTGAAATTATTGTTTTATTAACATACATCATCTTATGTATATATATATACGTATGGAACTCGAATTTTTGTTGGTGCATCATATACTGTTATGCATTTAATTTTATTATGCTTGTTCAGTTGGTGACATTTGGTCTTTTTCTTTTTGTTTTGGAATTATGTTAGTACTTCCATAAGTTTTGTTCAATAGTTTCATCTTGTAACATTGCAAATTCAAAACGACCCTAAGTGCTTATTTTTATCCAAACCAATAAATATTGGAGGCAGCATCGAATGAGGTCGTGCATGTTGATTAACATTTGGCATTATGTAATGATCTTGTTTTTGGTAGTTGCTGACGGGTTGTTATGGCGGGACAAGAAGGTGTCGGTTGCGGTTGTTGGTGGAGCAACGATAGTTTGGGCGTTTTTTGAATTGCTTGAATATCATTTGCTTCCAATCTTATGTTATGCGTTGATCGTGGTTGTTGCTCTCTTGTTCCTTTGGTCCAATGCTCATATACTCATCTACAAGTACGTTTCAATACCTAAAATCTCTCACTTTCATTAAGTATGATGGTAGTGTATGCTTGAACCTAGCTCTTACAAAAAAAATTGAGTGCATTAATAGGAGCCCTCCTCATCTTCCGGAAGTTCGTATTAGGGAGGAACCATTTCTACAGGTAGCTTCTGCAGTAAGGACCGAGATCAATCGGGCCATTGCGATCTTGCGTGATGTTGCATCTGGGAGAGATGTGAAGAAGTTTATTGCTGTAAGTGCTGTTAAAATAAACTGCCCAATGCACTAATTGCCTTCAATACTATATGAACTTTTTAACTTTAGAGCCTACTTAATTAGATTGAACTGCATAATCTTGTTTTTTTATTAATTTTTTGATCCAATGAATGAAATAGCTCCATTCATTTGATATGTTCAGATTATTTGTTTTAATTTTCTCTACAACATTTGTTGTACTTATTATAAGTTCATAGAAATCAATCCTAACCTTAATTAACAACCTACGTGATCATGTTTATGTTTATTTATAAGAGCAATGACGAGGCAAAAAAAGCACCATATGATGGGCTATGCAGCCCAGTTGTAACCAAGTATTCTCATATATTCTAATAGTGTTGAGTTTTACAATGTCAGGTGGTTGTTGGCTTGTGGTTCCTATCAGTAGTAGGAAATTGGTGCAATTTTTTGACCTTGTTTTACATAGGTAAGATTTACTTTCACAATACACCTCGAAACTCCCTGACCATTTCGACATTACTCAATTTTTTTCTTCTTTTTTTACAGTTGTGGTACTGCTGCACATGGTACCGGTCTTTTACGAGAAGTACAAGTACAAAATCGACTCATTTGCGGAAAAGATCGTGGCCGAGATTAGAAAGAAGTATACAGTTTTTAACGAGAAAGTGGCGAGTAAATTTTCCAAAGAACCATTAAGAGACAAGAAGGATTGAAAGAAAGGGAGGAAAAGAGTATAATGTGTGTTCTCTTTTGGACTTGAAAGTCTTCATTTTCGTTCTGGTTAATGTTGTGTAAATGTTTTGATTTGAAGTTCAAACCAAAGCTTATATGTGTCCTTGTACATATCAAACTTTTAGTGTAAGGTTACTTCTTTTCTTGAATTTGATTCGGTAGATGGATTTTGAATAGTGTGGTGAATTGATGTGGTTGTATTATGTGGTGATCGTTGAGACTTGTATGTGACAAAATTGACTAGGGAATGAATGTGAATGGGTATACTTCTGCC

mRNA sequence

ATGGCGGACTCTTCAGAAACTGTACAACCCAAGGCGGTGGAAATCGCCGACGATAATATTAACAATGATCAACACCCCATTACTCCATCTCCCCCGCCATCCTCTAATTTCAACAAAATGGACCATTCTCTGCCACTTTCGCCGGAGGACGAGACGGCAGAGAGTTCTCAAATGTTAGAGAAAAAGCAACCTGTTCATCGTGTTCTTGGTGCTGGAAAGCTTGCTGACGGGTTGTTATGGCGGGACAAGAAGGTGTCGGTTGCGGTTGTTGGTGGAGCAACGATAGTTTGGGCGTTTTTTGAATTGCTTGAATATCATTTGCTTCCAATCTTATGTTATGCGTTGATCGTGGTTGTTGCTCTCTTGTTCCTTTGGTCCAATGCTCATATACTCATCTACAAGAGCCCTCCTCATCTTCCGGAAGTTCGTATTAGGGAGGAACCATTTCTACAGGTAGCTTCTGCAGTAAGGACCGAGATCAATCGGGCCATTGCGATCTTGCGTGATGTTGCATCTGGGAGAGATGTGAAGAAGTTTATTGCTGTGGTTGTTGGCTTGTGGTTCCTATCAGTAGTAGGAAATTGGTGCAATTTTTTGACCTTGTTTTACATAGTTGTGGTACTGCTGCACATGGTACCGGTCTTTTACGAGAAGTACAAGTACAAAATCGACTCATTTGCGGAAAAGATCGTGGCCGAGATTAGAAAGAAGTATACAGTTTTTAACGAGAAAGTGGCGAGTAAATTTTCCAAAGAACCATTAAGAGACAAGAAGGATTGA

Coding sequence (CDS)

ATGGCGGACTCTTCAGAAACTGTACAACCCAAGGCGGTGGAAATCGCCGACGATAATATTAACAATGATCAACACCCCATTACTCCATCTCCCCCGCCATCCTCTAATTTCAACAAAATGGACCATTCTCTGCCACTTTCGCCGGAGGACGAGACGGCAGAGAGTTCTCAAATGTTAGAGAAAAAGCAACCTGTTCATCGTGTTCTTGGTGCTGGAAAGCTTGCTGACGGGTTGTTATGGCGGGACAAGAAGGTGTCGGTTGCGGTTGTTGGTGGAGCAACGATAGTTTGGGCGTTTTTTGAATTGCTTGAATATCATTTGCTTCCAATCTTATGTTATGCGTTGATCGTGGTTGTTGCTCTCTTGTTCCTTTGGTCCAATGCTCATATACTCATCTACAAGAGCCCTCCTCATCTTCCGGAAGTTCGTATTAGGGAGGAACCATTTCTACAGGTAGCTTCTGCAGTAAGGACCGAGATCAATCGGGCCATTGCGATCTTGCGTGATGTTGCATCTGGGAGAGATGTGAAGAAGTTTATTGCTGTGGTTGTTGGCTTGTGGTTCCTATCAGTAGTAGGAAATTGGTGCAATTTTTTGACCTTGTTTTACATAGTTGTGGTACTGCTGCACATGGTACCGGTCTTTTACGAGAAGTACAAGTACAAAATCGACTCATTTGCGGAAAAGATCGTGGCCGAGATTAGAAAGAAGTATACAGTTTTTAACGAGAAAGTGGCGAGTAAATTTTCCAAAGAACCATTAAGAGACAAGAAGGATTGA

Protein sequence

MADSSETVQPKAVEIADDNINNDQHPITPSPPPSSNFNKMDHSLPLSPEDETAESSQMLEKKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALIVVVALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDVKKFIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRKKYTVFNEKVASKFSKEPLRDKKD

Homology

[Close]

BLAST of CsaV3_6G000910 vs. NCBI nr
Match: KGN45697.1 (hypothetical protein Csa_6G006830 [Cucumis sativus])

HSP 1 Score: 496.9 bits (1278), Expect = 4.2e-137
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MADSSETVQPKAVEIADDNINNDQHPITPSPPPSSNFNKMDHSLPLSPEDETAESSQMLE 60
           MADSSETVQPKAVEIADDNINNDQHPITPSPPPSSNFNKMDHSLPLSPEDETAESSQMLE
Sbjct: 1   MADSSETVQPKAVEIADDNINNDQHPITPSPPPSSNFNKMDHSLPLSPEDETAESSQMLE 60

Query: 61  KKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALIVVVA 120
           KKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALIVVVA
Sbjct: 61  KKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALIVVVA 120

Query: 121 LLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDVKKFI 180
           LLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDVKKFI
Sbjct: 121 LLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDVKKFI 180

Query: 181 AVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRKKYTV 240
           AVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRKKYTV
Sbjct: 181 AVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRKKYTV 240

Query: 241 FNEKVASKFSKEPLRDKKD 260
           FNEKVASKFSKEPLRDKKD
Sbjct: 241 FNEKVASKFSKEPLRDKKD 259

[Close]

BLAST of CsaV3_6G000910 vs. NCBI nr
Match: XP_008458672.1 (PREDICTED: reticulon-like protein B2 [Cucumis melo])

HSP 1 Score: 428.7 bits (1101), Expect = 1.4e-116
Identity = 228/259 (88.03%), Postives = 237/259 (91.51%), Query Frame = 0


Query: 1   MADSSETVQPKAVEIADDNINNDQHPITPSPPPSSNFNKMDHSLPLSPEDETAESSQMLE 60
           MAD SETVQPKAVEIADDNINNDQ PITPSPP SSN +K+DHS    PEDE AESS+ML 
Sbjct: 1   MADPSETVQPKAVEIADDNINNDQQPITPSPPLSSNSDKVDHS---PPEDEAAESSEMLR 60

Query: 61  KKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALIVVVA 120
           KKQPVHRVLG+GKLAD  LWRDKKVSVA VGGATIVWAFFELLEYHLLPILCYALIVVVA
Sbjct: 61  KKQPVHRVLGSGKLADAFLWRDKKVSVAFVGGATIVWAFFELLEYHLLPILCYALIVVVA 120

Query: 121 LLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDVKKFI 180
           LLFLWSNAHI IYKSPPHLPEVRIREEP LQVASA R EINRAIA+LRDVASGRDVKKF+
Sbjct: 121 LLFLWSNAHIFIYKSPPHLPEVRIREEPLLQVASAARIEINRAIAMLRDVASGRDVKKFL 180

Query: 181 AVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRKKYTV 240
           AVVVGLWFLSVVG  CNFLTLFYIVVVLLH VPVFYEKYKYKIDSF EKIVAE +KKY+V
Sbjct: 181 AVVVGLWFLSVVGKRCNFLTLFYIVVVLLHTVPVFYEKYKYKIDSFMEKIVAESKKKYSV 240

Query: 241 FNEKVASKFSKEPLRDKKD 260
           FNEKVAS+FSKEPLRDKKD
Sbjct: 241 FNEKVASRFSKEPLRDKKD 256

[Close]

BLAST of CsaV3_6G000910 vs. NCBI nr
Match: XP_011656361.1 (PREDICTED: reticulon-like protein B2 [Cucumis sativus])

HSP 1 Score: 422.2 bits (1084), Expect = 1.3e-114
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 40  MDHSLPLSPEDETAESSQMLEKKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAF 99
           MDHSLPLSPEDETAESSQMLEKKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAF
Sbjct: 1   MDHSLPLSPEDETAESSQMLEKKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAF 60

Query: 100 FELLEYHLLPILCYALIVVVALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTE 159
           FELLEYHLLPILCYALIVVVALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTE
Sbjct: 61  FELLEYHLLPILCYALIVVVALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTE 120

Query: 160 INRAIAILRDVASGRDVKKFIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKY 219
           INRAIAILRDVASGRDVKKFIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKY
Sbjct: 121 INRAIAILRDVASGRDVKKFIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKY 180

Query: 220 KYKIDSFAEKIVAEIRKKYTVFNEKVASKFSKEPLRDKKD 260
           KYKIDSFAEKIVAEIRKKYTVFNEKVASKFSKEPLRDKKD
Sbjct: 181 KYKIDSFAEKIVAEIRKKYTVFNEKVASKFSKEPLRDKKD 220

[Close]

BLAST of CsaV3_6G000910 vs. NCBI nr
Match: XP_023514697.1 (reticulon-like protein B1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316.6 bits (810), Expect = 7.8e-83
Identity = 170/261 (65.13%), Postives = 205/261 (78.54%), Query Frame = 0


Query: 1   MADSSETVQ--PKAVEIADDNINNDQHPITPSPPPSSNFNKMDHSLPLSPEDETAESSQM 60
           MAD  ET Q  P AVE+AD        P++  P  +S+  K+  S P SP  E AE S+M
Sbjct: 1   MADHLETKQSEPMAVEVADQT-----EPLSSPPSHNSDAGKIADS-PPSPPVEEAEGSKM 60

Query: 61  LEKKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALIVV 120
           ++ +QPVHRVLG GK AD LLW++KK+S  ++GGAT +WAFFE+LEYHLLP++CYALI+V
Sbjct: 61  VDSEQPVHRVLGGGKPADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALILV 120

Query: 121 VALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDVKK 180
           VALLFLWSNAHI IYK+PPHLPEVRI++EPFLQVASA RT INRAIA L D+ASGRDVKK
Sbjct: 121 VALLFLWSNAHIFIYKTPPHLPEVRIKDEPFLQVASAARTMINRAIATLGDIASGRDVKK 180

Query: 181 FIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRKKY 240
           F+AVV GLW LSV+G+WCNFLTLFYI VVLLH VPV YEKYK KID+ A++I+ E +K+Y
Sbjct: 181 FLAVVAGLWILSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRY 240

Query: 241 TVFNEKVASKFSKEPLRDKKD 260
            VFNEKV SK  K   R+KK+
Sbjct: 241 AVFNEKVVSKLPKGVFREKKE 255

[Close]

BLAST of CsaV3_6G000910 vs. NCBI nr
Match: XP_022964049.1 (reticulon-like protein B1 [Cucurbita moschata])

HSP 1 Score: 314.3 bits (804), Expect = 3.9e-82
Identity = 164/251 (65.34%), Postives = 201/251 (80.08%), Query Frame = 0


Query: 9   QPKAVEIADDNINNDQHPITPSPPPSSNFNKMDHSLPLSPEDETAESSQMLEKKQPVHRV 68
           +P AVE+AD        P++  P  +S+  K+  S P SP  E A+ S+M++ +QPVHRV
Sbjct: 11  EPMAVEVADQT-----EPLSSPPSHNSDAGKIADS-PPSPPVEEAQGSKMVDSEQPVHRV 70

Query: 69  LGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALIVVVALLFLWSNA 128
           LG GK AD LLW++KK+S  ++GGAT +WAFFE+LEYHLLP++CYALI+VVALLFLWSNA
Sbjct: 71  LGGGKPADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALILVVALLFLWSNA 130

Query: 129 HILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDVKKFIAVVVGLWF 188
           HI IYKSPPHLPEVRI++EPFLQVASA RT INRAIA+L D+ASGRDVKKF+AVV GLW 
Sbjct: 131 HIFIYKSPPHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDVKKFLAVVAGLWI 190

Query: 189 LSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRKKYTVFNEKVASK 248
           LSV+G+WCNFLTLFYI VVLLH VPV YEKYK KID+ A++I+ E +K+Y VFNEKV SK
Sbjct: 191 LSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSK 250

Query: 249 FSKEPLRDKKD 260
             K   R+KK+
Sbjct: 251 LPKGVFREKKE 255

[Close]

BLAST of CsaV3_6G000910 vs. TAIR10
Match: AT4G11220.1 (VIRB2-interacting protein 2)

HSP 1 Score: 233.4 bits (594), Expect = 1.6e-61
Identity = 113/202 (55.94%), Postives = 157/202 (77.72%), Query Frame = 0


Query: 57  QMLEKKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALI 116
           ++  +++PVH+VLG GK AD  +W+DKK+S  V GGAT+ W  FEL+EYHLL +LC+ +I
Sbjct: 68  RLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMI 127

Query: 117 VVVALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDV 176
           V +A+LFLWSNA + I+KSPP +PEV I EEP LQ+AS +R EINR I+ LR++ASGRD+
Sbjct: 128 VALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDI 187

Query: 177 KKFIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRK 236
           KKF++ + GLW LS++G   +FLTL YI +VLL  VP+FY+KY+ K+DS+ EK +AE++K
Sbjct: 188 KKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKK 247

Query: 237 KYTVFNEKVASKFSKEPLRDKK 259
           +Y V + KV SK  + PL+DKK
Sbjct: 248 QYAVLDAKVFSKIPRGPLKDKK 269

[Close]

BLAST of CsaV3_6G000910 vs. TAIR10
Match: AT2G46170.1 (Reticulon family protein)

HSP 1 Score: 227.6 bits (579), Expect = 8.6e-60
Identity = 118/217 (54.38%), Postives = 157/217 (72.35%), Query Frame = 0


Query: 41  DHSLPLSPEDETAESSQMLEKKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFF 100
           ++  P SP    A+  +M  +++PVH+VLG GK AD  LWRDKK+S AV+G AT +W  F
Sbjct: 35  EYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLF 94

Query: 101 ELLEYHLLPILCYALIVVVALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEI 160
           EL+EYHLL +LC+  I+ +  LFLWSNAH LI K+ P +PE+ + EE FL VAS++R E+
Sbjct: 95  ELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNEL 154

Query: 161 NRAIAILRDVASGRDVKKFIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYK 220
           N+A  ILR +A GRD+KKF+ VVVGLW +SVVGNW NFLTL YI  V+LH VP+ YEK++
Sbjct: 155 NQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHE 214

Query: 221 YKIDSFAEKIVAEIRKKYTVFNEKVASKFSKEPLRDK 258
            K+D  AEK + E++K+Y VF+EKV SK     L+ K
Sbjct: 215 DKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAK 251

[Close]

BLAST of CsaV3_6G000910 vs. TAIR10
Match: AT4G23630.1 (VIRB2-interacting protein 1)

HSP 1 Score: 221.9 bits (564), Expect = 4.7e-58
Identity = 111/202 (54.95%), Postives = 151/202 (74.75%), Query Frame = 0


Query: 57  QMLEKKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALI 116
           ++  ++QPVH+VLG GK AD  +W++KK+S  V+GGAT  W  FEL+EYHLL +LC+ +I
Sbjct: 72  RLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMI 131

Query: 117 VVVALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDV 176
           VV+A+LFLWSNA + I KSPP +PEV I EEP LQ+AS +R EINR  + LR++ASGRD+
Sbjct: 132 VVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDL 191

Query: 177 KKFIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRK 236
           KKF+  + GLW LS++G   NFLTL YI +VLL  VP+ Y+KY+ K+D   EK + E++K
Sbjct: 192 KKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKK 251

Query: 237 KYTVFNEKVASKFSKEPLRDKK 259
           +Y V +EKV SK    PL++KK
Sbjct: 252 QYAVLDEKVLSKIPLGPLKNKK 273

[Close]

BLAST of CsaV3_6G000910 vs. TAIR10
Match: AT5G41600.1 (VIRB2-interacting protein 3)

HSP 1 Score: 214.2 bits (544), Expect = 9.8e-56
Identity = 111/207 (53.62%), Postives = 145/207 (70.05%), Query Frame = 0


Query: 57  QMLEKKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALI 116
           ++  +++PVH+VLG GK AD  LWR+KKVS  V+G  T  W  FEL EYHLL  LC+  I
Sbjct: 51  RLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAI 110

Query: 117 VVVALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDV 176
             +A LFLWSNA   I+KS PH+PEV I E+P LQ+ S +R EINR + +LR++ASG+DV
Sbjct: 111 FALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDV 170

Query: 177 KKFIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRK 236
           KKFI V+ GLW LS++G+  NFLTLFY   VLL  +PV YEKY+ K+D++ EK + EI+K
Sbjct: 171 KKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKK 230

Query: 237 KYTVFNE----KVASKFSKEPLRDKKD 260
           +Y V +E    KV SK  +  L  KKD
Sbjct: 231 QYAVLDEKVLRKVISKIPRGALNKKKD 257

[Close]

BLAST of CsaV3_6G000910 vs. TAIR10
Match: AT1G64090.2 (Reticulan like protein B3)

HSP 1 Score: 196.8 bits (499), Expect = 1.6e-50
Identity = 108/214 (50.47%), Postives = 143/214 (66.82%), Query Frame = 0


Query: 57  QMLEKKQPVHRVLGAGK----------------LADGLLWRDKKVSVAVVGGATIVWAFF 116
           ++  ++QP+H++ G GK                 AD  LWR+KKVS  V+G AT+ W  F
Sbjct: 47  RLFGREQPLHKLFGGGKHSENQDINERFGLVFAAADIFLWRNKKVSGGVLGAATVSWILF 106

Query: 117 ELLEYHLLPILCYALIVVVALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEI 176
           ELLEY+LL +  +  I+ +A+LFLWS+A   I+KSP H+PEV I E+  LQ+AS +R EI
Sbjct: 107 ELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEI 166

Query: 177 NRAIAILRDVASGRDVKKFIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYK 236
           NR   +LRD+ASGRD+KKF+ V+ GLW LS VG+ CNFLTL YI  VLL  +PV YEKY+
Sbjct: 167 NRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYE 226

Query: 237 YKIDSFAEKIVAEIRKKYTVFNEKVASK-FSKEP 254
            K+D F EK + EI+K+Y  F+ KV SK  SK P
Sbjct: 227 DKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIP 260

[Close]

BLAST of CsaV3_6G000910 vs. Swiss-Prot
Match: sp|Q9SUT9|RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.8e-60
Identity = 113/202 (55.94%), Postives = 157/202 (77.72%), Query Frame = 0


Query: 57  QMLEKKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALI 116
           ++  +++PVH+VLG GK AD  +W+DKK+S  V GGAT+ W  FEL+EYHLL +LC+ +I
Sbjct: 68  RLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMI 127

Query: 117 VVVALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDV 176
           V +A+LFLWSNA + I+KSPP +PEV I EEP LQ+AS +R EINR I+ LR++ASGRD+
Sbjct: 128 VALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDI 187

Query: 177 KKFIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRK 236
           KKF++ + GLW LS++G   +FLTL YI +VLL  VP+FY+KY+ K+DS+ EK +AE++K
Sbjct: 188 KKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKK 247

Query: 237 KYTVFNEKVASKFSKEPLRDKK 259
           +Y V + KV SK  + PL+DKK
Sbjct: 248 QYAVLDAKVFSKIPRGPLKDKK 269

[Close]

BLAST of CsaV3_6G000910 vs. Swiss-Prot
Match: sp|O82352|RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.6e-58
Identity = 118/217 (54.38%), Postives = 157/217 (72.35%), Query Frame = 0


Query: 41  DHSLPLSPEDETAESSQMLEKKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFF 100
           ++  P SP    A+  +M  +++PVH+VLG GK AD  LWRDKK+S AV+G AT +W  F
Sbjct: 35  EYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLF 94

Query: 101 ELLEYHLLPILCYALIVVVALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEI 160
           EL+EYHLL +LC+  I+ +  LFLWSNAH LI K+ P +PE+ + EE FL VAS++R E+
Sbjct: 95  ELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNEL 154

Query: 161 NRAIAILRDVASGRDVKKFIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYK 220
           N+A  ILR +A GRD+KKF+ VVVGLW +SVVGNW NFLTL YI  V+LH VP+ YEK++
Sbjct: 155 NQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHE 214

Query: 221 YKIDSFAEKIVAEIRKKYTVFNEKVASKFSKEPLRDK 258
            K+D  AEK + E++K+Y VF+EKV SK     L+ K
Sbjct: 215 DKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAK 251

[Close]

BLAST of CsaV3_6G000910 vs. Swiss-Prot
Match: sp|Q9SUR3|RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 8.5e-57
Identity = 111/202 (54.95%), Postives = 151/202 (74.75%), Query Frame = 0


Query: 57  QMLEKKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALI 116
           ++  ++QPVH+VLG GK AD  +W++KK+S  V+GGAT  W  FEL+EYHLL +LC+ +I
Sbjct: 72  RLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMI 131

Query: 117 VVVALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDV 176
           VV+A+LFLWSNA + I KSPP +PEV I EEP LQ+AS +R EINR  + LR++ASGRD+
Sbjct: 132 VVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDL 191

Query: 177 KKFIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRK 236
           KKF+  + GLW LS++G   NFLTL YI +VLL  VP+ Y+KY+ K+D   EK + E++K
Sbjct: 192 KKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKK 251

Query: 237 KYTVFNEKVASKFSKEPLRDKK 259
           +Y V +EKV SK    PL++KK
Sbjct: 252 QYAVLDEKVLSKIPLGPLKNKK 273

[Close]

BLAST of CsaV3_6G000910 vs. Swiss-Prot
Match: sp|Q6DBN4|RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.7e-55
Identity = 111/211 (52.61%), Postives = 150/211 (71.09%), Query Frame = 0


Query: 47  SPEDETAESSQMLEKKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYH 106
           SP    A+  ++  +++PVH+VLG G  AD  LWRDKK+S +V+G AT +W  FEL+EYH
Sbjct: 41  SPSALKAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYH 100

Query: 107 LLPILCYALIVVVALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAI 166
            L ++C+ LI  +A LFL SNAH  + K+PP +PE+ I+EE FL + SA+R E+N+A  I
Sbjct: 101 FLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVI 160

Query: 167 LRDVASGRDVKKFIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSF 226
           LR +A GRD+KKF+ VV GLW +SVVGNW NFLTL YI  V+LH VP+ YEK++ K+D  
Sbjct: 161 LRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPV 220

Query: 227 AEKIVAEIRKKYTVFNEKVASKFSKEPLRDK 258
           AEK + E++K Y VF+EKV SK     L+ K
Sbjct: 221 AEKTLKELKKHYMVFDEKVLSKLPVASLKAK 251

[Close]

BLAST of CsaV3_6G000910 vs. Swiss-Prot
Match: sp|Q9FFS0|RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.8e-54
Identity = 111/207 (53.62%), Postives = 145/207 (70.05%), Query Frame = 0


Query: 57  QMLEKKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALI 116
           ++  +++PVH+VLG GK AD  LWR+KKVS  V+G  T  W  FEL EYHLL  LC+  I
Sbjct: 51  RLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAI 110

Query: 117 VVVALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDV 176
             +A LFLWSNA   I+KS PH+PEV I E+P LQ+ S +R EINR + +LR++ASG+DV
Sbjct: 111 FALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDV 170

Query: 177 KKFIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRK 236
           KKFI V+ GLW LS++G+  NFLTLFY   VLL  +PV YEKY+ K+D++ EK + EI+K
Sbjct: 171 KKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKK 230

Query: 237 KYTVFNE----KVASKFSKEPLRDKKD 260
           +Y V +E    KV SK  +  L  KKD
Sbjct: 231 QYAVLDEKVLRKVISKIPRGALNKKKD 257

[Close]

BLAST of CsaV3_6G000910 vs. TrEMBL
Match: tr|A0A0A0KBC8|A0A0A0KBC8_CUCSA (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G006830 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 2.8e-137
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MADSSETVQPKAVEIADDNINNDQHPITPSPPPSSNFNKMDHSLPLSPEDETAESSQMLE 60
           MADSSETVQPKAVEIADDNINNDQHPITPSPPPSSNFNKMDHSLPLSPEDETAESSQMLE
Sbjct: 1   MADSSETVQPKAVEIADDNINNDQHPITPSPPPSSNFNKMDHSLPLSPEDETAESSQMLE 60

Query: 61  KKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALIVVVA 120
           KKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALIVVVA
Sbjct: 61  KKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALIVVVA 120

Query: 121 LLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDVKKFI 180
           LLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDVKKFI
Sbjct: 121 LLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDVKKFI 180

Query: 181 AVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRKKYTV 240
           AVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRKKYTV
Sbjct: 181 AVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRKKYTV 240

Query: 241 FNEKVASKFSKEPLRDKKD 260
           FNEKVASKFSKEPLRDKKD
Sbjct: 241 FNEKVASKFSKEPLRDKKD 259

[Close]

BLAST of CsaV3_6G000910 vs. TrEMBL
Match: tr|A0A1S3C9M8|A0A1S3C9M8_CUCME (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103498001 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 9.3e-117
Identity = 228/259 (88.03%), Postives = 237/259 (91.51%), Query Frame = 0


Query: 1   MADSSETVQPKAVEIADDNINNDQHPITPSPPPSSNFNKMDHSLPLSPEDETAESSQMLE 60
           MAD SETVQPKAVEIADDNINNDQ PITPSPP SSN +K+DHS    PEDE AESS+ML 
Sbjct: 1   MADPSETVQPKAVEIADDNINNDQQPITPSPPLSSNSDKVDHS---PPEDEAAESSEMLR 60

Query: 61  KKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALIVVVA 120
           KKQPVHRVLG+GKLAD  LWRDKKVSVA VGGATIVWAFFELLEYHLLPILCYALIVVVA
Sbjct: 61  KKQPVHRVLGSGKLADAFLWRDKKVSVAFVGGATIVWAFFELLEYHLLPILCYALIVVVA 120

Query: 121 LLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDVKKFI 180
           LLFLWSNAHI IYKSPPHLPEVRIREEP LQVASA R EINRAIA+LRDVASGRDVKKF+
Sbjct: 121 LLFLWSNAHIFIYKSPPHLPEVRIREEPLLQVASAARIEINRAIAMLRDVASGRDVKKFL 180

Query: 181 AVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRKKYTV 240
           AVVVGLWFLSVVG  CNFLTLFYIVVVLLH VPVFYEKYKYKIDSF EKIVAE +KKY+V
Sbjct: 181 AVVVGLWFLSVVGKRCNFLTLFYIVVVLLHTVPVFYEKYKYKIDSFMEKIVAESKKKYSV 240

Query: 241 FNEKVASKFSKEPLRDKKD 260
           FNEKVAS+FSKEPLRDKKD
Sbjct: 241 FNEKVASRFSKEPLRDKKD 256

[Close]

BLAST of CsaV3_6G000910 vs. TrEMBL
Match: tr|A0A068UJX6|A0A068UJX6_COFCA (Reticulon-like protein OS=Coffea canephora OX=49390 GN=GSCOC_T00027827001 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.3e-67
Identity = 130/202 (64.36%), Postives = 166/202 (82.18%), Query Frame = 0


Query: 57  QMLEKKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALI 116
           ++  +++PVH+V G GK AD  LWR+K++S AV+GGAT VW  FELLEYHLL ++C+ LI
Sbjct: 60  RLFGREKPVHQVFGGGKPADVFLWRNKRISAAVLGGATAVWVLFELLEYHLLTLVCHILI 119

Query: 117 VVVALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDV 176
           + +A+LFLWSNA   I KSPP +PEVR+ EEPFLQVA+AVR EINRA+A+LR++ASGRD+
Sbjct: 120 LALAILFLWSNATTFINKSPPRIPEVRLSEEPFLQVAAAVRFEINRALAVLREIASGRDL 179

Query: 177 KKFIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRK 236
           KKF+AVV GLWF S++G++CNFLTLFYI  VLLH +PV YEKY+ K+DSFAEK + EIRK
Sbjct: 180 KKFLAVVSGLWFFSILGSYCNFLTLFYITFVLLHTLPVLYEKYEDKVDSFAEKAMIEIRK 239

Query: 237 KYTVFNEKVASKFSKEPLRDKK 259
           KY VF+EKV SK  + P +DKK
Sbjct: 240 KYAVFDEKVLSKIPRGPSKDKK 261

[Close]

BLAST of CsaV3_6G000910 vs. TrEMBL
Match: tr|A0A200R2I2|A0A200R2I2_9MAGN (Reticulon-like protein OS=Macleaya cordata OX=56857 GN=BVC80_737g6 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 9.7e-66
Identity = 127/212 (59.91%), Postives = 167/212 (78.77%), Query Frame = 0


Query: 47  SPEDETAESSQMLEKKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYH 106
           SP    +  +++  +++PVH+V G GK AD  LWR+KK+S +V+G AT +W  FELLEYH
Sbjct: 42  SPSAVKSAMNRLFGRQKPVHKVFGGGKPADVFLWRNKKISASVLGVATAMWVLFELLEYH 101

Query: 107 LLPILCYALIVVVALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAI 166
           LL ++C+ LI+ +A+LFLWSNA   I KSPP +PEV + EEPFLQ+ASA+R EINRA ++
Sbjct: 102 LLTLVCHCLILSLAILFLWSNASTFINKSPPRIPEVHLPEEPFLQIASALRIEINRAFSV 161

Query: 167 LRDVASGRDVKKFIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSF 226
           LRD+ASGRD+KKF+ V+ GLW LS+VG+WCNFLTLFYIV VLLH VPV YEKY+ ++DSF
Sbjct: 162 LRDIASGRDLKKFLGVIAGLWVLSIVGSWCNFLTLFYIVFVLLHTVPVLYEKYEDQVDSF 221

Query: 227 AEKIVAEIRKKYTVFNEKVASKFSKEPLRDKK 259
           AEK + EI+K+Y VF+ KV SK  + PL+DKK
Sbjct: 222 AEKAMHEIKKQYVVFDAKVLSKIPRGPLKDKK 253

[Close]

BLAST of CsaV3_6G000910 vs. TrEMBL
Match: tr|B9RCJ7|B9RCJ7_RICCO (Reticulon-like protein OS=Ricinus communis OX=3988 GN=RCOM_1689400 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 9.7e-66
Identity = 128/202 (63.37%), Postives = 160/202 (79.21%), Query Frame = 0


Query: 57  QMLEKKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALI 116
           ++  +++PVH VLG GK AD  LWR+KKVS  V+G AT VW  FEL+EYHLL ++C+  I
Sbjct: 57  RLFGREKPVHHVLGGGKPADIFLWRNKKVSAGVLGFATAVWVLFELIEYHLLTLICHGFI 116

Query: 117 VVVALLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDV 176
           + +A+LFLWSNA   I KSPPH+PEV I EEP LQVA+A+R EIN A AILRD+ASGRD+
Sbjct: 117 LALAILFLWSNASTFINKSPPHIPEVHIPEEPVLQVAAALRMEINYAFAILRDIASGRDL 176

Query: 177 KKFIAVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRK 236
           KKF++V+ GLW LS+VG+WCNFLTLFYI  VLLH VPVFYEKY+ K+D+FAEK   EI+K
Sbjct: 177 KKFLSVIAGLWVLSIVGSWCNFLTLFYIAFVLLHTVPVFYEKYEDKVDAFAEKAAIEIKK 236

Query: 237 KYTVFNEKVASKFSKEPLRDKK 259
           +Y VF+ KV SK  + PL+DKK
Sbjct: 237 QYAVFDAKVLSKIPRGPLKDKK 258

The following BLAST results are available for this feature:

BLAST of CsaV3_6G000910 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN45697.1	4.2e-137	100.00	hypothetical protein Csa_6G006830 [Cucumis sativus]	[more]
XP_008458672.1	1.4e-116	88.03	PREDICTED: reticulon-like protein B2 [Cucumis melo]	[more]
XP_011656361.1	1.3e-114	100.00	PREDICTED: reticulon-like protein B2 [Cucumis sativus]	[more]
XP_023514697.1	7.8e-83	65.13	reticulon-like protein B1 [Cucurbita pepo subsp. pepo]	[more]
XP_022964049.1	3.9e-82	65.34	reticulon-like protein B1 [Cucurbita moschata]	[more]

BLAST of CsaV3_6G000910 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G11220.1	1.6e-61	55.94	VIRB2-interacting protein 2	[more]
AT2G46170.1	8.6e-60	54.38	Reticulon family protein	[more]
AT4G23630.1	4.7e-58	54.95	VIRB2-interacting protein 1	[more]
AT5G41600.1	9.8e-56	53.62	VIRB2-interacting protein 3	[more]
AT1G64090.2	1.6e-50	50.47	Reticulan like protein B3	[more]

BLAST of CsaV3_6G000910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SUT9\|RTNLB_ARATH	2.8e-60	55.94	Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1	[more]
sp\|O82352\|RTNLE_ARATH	1.6e-58	54.38	Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1	[more]
sp\|Q9SUR3\|RTNLA_ARATH	8.5e-57	54.95	Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1	[more]
sp\|Q6DBN4\|RTNLF_ARATH	2.7e-55	52.61	Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1	[more]
sp\|Q9FFS0\|RTNLD_ARATH	1.8e-54	53.62	Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1	[more]

BLAST of CsaV3_6G000910 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KBC8\|A0A0A0KBC8_CUCSA	2.8e-137	100.00	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G006830 PE=4 SV=1	[more]
tr\|A0A1S3C9M8\|A0A1S3C9M8_CUCME	9.3e-117	88.03	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103498001 PE=4 SV=1	[more]
tr\|A0A068UJX6\|A0A068UJX6_COFCA	2.3e-67	64.36	Reticulon-like protein OS=Coffea canephora OX=49390 GN=GSCOC_T00027827001 PE=4 S...	[more]
tr\|A0A200R2I2\|A0A200R2I2_9MAGN	9.7e-66	59.91	Reticulon-like protein OS=Macleaya cordata OX=56857 GN=BVC80_737g6 PE=4 SV=1	[more]
tr\|B9RCJ7\|B9RCJ7_RICCO	9.7e-66	63.37	Reticulon-like protein OS=Ricinus communis OX=3988 GN=RCOM_1689400 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003388	Reticulon

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0071786	endoplasmic reticulum tubular network organization
biological_process	GO:0010286	heat acclimation
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0071782	endoplasmic reticulum tubular network
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0071458	integral component of cytoplasmic side of endoplasmic reticulum membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G000910.1	CsaV3_6G000910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 75..230 e-value: 2.1E-50 score: 170.6
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 74..259 score: 41.574
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	PANTHER	PTHR10994:SF70	RETICULON-LIKE PROTEIN B1-RELATED	coord: 1..258
None	No IPR available	PANTHER	PTHR10994	RETICULON	coord: 1..258

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G000910	CSPI06G00830	Wild cucumber (PI 183967)	cpicucB364
CsaV3_6G000910	CSPI05G04890	Wild cucumber (PI 183967)	cpicucB307
CsaV3_6G000910	CSPI03G08420	Wild cucumber (PI 183967)	cpicucB189
CsaV3_6G000910	Cucsa.135800	Cucumber (Gy14) v1	cgycucB203
CsaV3_6G000910	Cucsa.303630	Cucumber (Gy14) v1	cgycucB471
CsaV3_6G000910	CmaCh08G008850	Cucurbita maxima (Rimu)	cmacucB1073
CsaV3_6G000910	CmoCh15G013250	Cucurbita moschata (Rifu)	cmocucB0363
CsaV3_6G000910	CmoCh08G008580	Cucurbita moschata (Rifu)	cmocucB1055
CsaV3_6G000910	Cp4.1LG13g01330	Cucurbita pepo (Zucchini)	cpecucB0242
CsaV3_6G000910	Cp4.1LG17g03770	Cucurbita pepo (Zucchini)	cpecucB0395
CsaV3_6G000910	CsGy3G008540	Cucumber (Gy14) v2	cgybcucB152
CsaV3_6G000910	CsGy6G000900	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G000910	CsGy5G002190	Cucumber (Gy14) v2	cgybcucB243
CsaV3_6G000910	Carg13848	Silver-seed gourd	carcucB0637
CsaV3_6G000910	Cla011396	Watermelon (97103) v1	cucwmB529
CsaV3_6G000910	Cla006637	Watermelon (97103) v1	cucwmB565
CsaV3_6G000910	MELO3C005725	Melon (DHL92) v3.5.1	cucmeB426
CsaV3_6G000910	MELO3C021178	Melon (DHL92) v3.5.1	cucmeB430
CsaV3_6G000910	MELO3C006075	Melon (DHL92) v3.5.1	cucmeB511
CsaV3_6G000910	ClCG06G003390	Watermelon (Charleston Gray)	cucwcgB502
CsaV3_6G000910	ClCG01G002190	Watermelon (Charleston Gray)	cucwcgB456
CsaV3_6G000910	Lsi09G015990	Bottle gourd (USVL1VR-Ls)	cuclsiB418
CsaV3_6G000910	Lsi09G002000	Bottle gourd (USVL1VR-Ls)	cuclsiB429
CsaV3_6G000910	MELO3C006075.2	Melon (DHL92) v3.6.1	cucmedB499
CsaV3_6G000910	MELO3C021178.2	Melon (DHL92) v3.6.1	cucmedB420
CsaV3_6G000910	MELO3C005725.2	Melon (DHL92) v3.6.1	cucmedB417
CsaV3_6G000910	Cla97C01G002210	Watermelon (97103) v2	cucwmbB431
CsaV3_6G000910	Cla97C06G112760	Watermelon (97103) v2	cucwmbB492
CsaV3_6G000910	Bhi12G001861	Wax gourd	cucwgoB555

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_6G000910	CsaV3_3G008540	Cucumber (Chinese Long) v3	cuccucB151
CsaV3_6G000910	CsaV3_5G002290	Cucumber (Chinese Long) v3	cuccucB204

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G000910	Silver-seed gourd	carcucB0650
CsaV3_6G000910	Cucurbita maxima (Rimu)	cmacucB0440
CsaV3_6G000910	Cucurbita moschata (Rifu)	cmocucB0432
CsaV3_6G000910	Cucurbita pepo (Zucchini)	cpecucB0165
CsaV3_6G000910	Wax gourd	cucwgoB560