Carg13848 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13848
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Reticulon-like protein
Location	Cucurbita_argyrosperma_scaffold_042 : 218426 .. 220021 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTGGAAGTCGCCGACCAAACTGAACCCATTTCTTCGCCGCCGTCTCACAATTCGGATGCCGGGAAAATTGCCGATTCTCCTCCCTCGCCGCCTGTGGAGGAGGCTCAGGGGTCTAAAATGGTCGACAGCGAGCAGCCTGTTCATCGTGTTCTCGGCGGCGGAAAGCGTACGCATCCTCTGTTTTTTAATTTTAAGACGGGTTATCGGTACATACTTGAAGTTATCAATATATGAATTCTTAGCCATCGTGGAGTTTCTAAGAAGGGTTATCGGTAGCATACTTGATGTCATAAATATATAAATTTTTAGCCATAACTTCGAGGTGGCTTATGGATAACGTACTTGAAGTCATCAATATATAAATTTTTAGTCATACCTCCAAGATAGGTTATCAGTAACCTACTTGAAGTCATCCATATATAAATTTTTGGCTGTAACTCCAAGATGGGTTGTCGGTAATCGGTAACCTACGTAAAGTCATCAATATATAAATTTTTTGTCGTAATTCCAAGATGGGTTATCGGTAACATACGTGAAGTCATCGATATATGAACTCTTGGTCATTGTGGAGTTTTGAATTCTCCTTGTGTCTTCTCTATTTTTTTCTTCTAGATCGAGTGTCTGAGTTGACCATCCTTAACTCCAATTGTAAGCATTTTTAAAAAAAAATTCAATTGAAGTTTCATTTTTATCTCCAATTGTAAATAGTTAATTGTTGAGGGGTATAAGAGAAATGAAGTTGTGCACATTGACATAGACGACATTATTGATGAGTTGGTAATTTGTGTAGCTGCGGACGTGTTGTTATGGAAGAACAAGAAGATCTCTGCCGGGATTCTCGGCGGAGCCACCGCAATTTGGGCGTTCTTTGAAGTCCTCGAATATCATCTTCTCCCATTGATATGTTACGCCTTGATCTTGGTTGTTGCTCTCTTATTCCTTTGGTCCAACGCTCACATTTTTATCTACAAGTAACCTTCATTACCTCAAACTATGTGTTACATTCTTGAACTCTTACTTTTTAATGCAAAATTTCAACGAAAACTTTGACACCTTTACAGGAGCCCGCCTCATCTTCCCGAAGTTCGTATCAAAGACGAGCCGTTCCTGCAGGTTGCCTCTGCAGCAAGGACCATGATCAACCGGGCCATTGCAATGTTGGGCGACATAGCATCGGGGAGAGACGTGAAGAAGTTTCTAGCTGTAAGTACATTTATGAACTTGTGGTGTACTAATAATAGATACTTAACAATGTTTTTGGTTTCTCACAATGTTAGGTAGTTGCTGGCTTGTGGATTCTATCAGTTATAGGAAGTTGGTGCAATTTTTTGACCTTGTTCTACATCGGTAATAATTTAACGATACTCCGTACGAAACTTGTGCTGTTTCGAACTTTTCTCACAATGTTGGTCTTTTTGAACAGCGGTCGTATTGCTGCACACGGTACCGGTCGTTTACGAGAAGTACAAGGGTAAGATCGATACGTCTGCACAAAGGATCATGGTCGAGAGTAAAAAGAGGTACGCGGTTTTTAACGAGAAAGTTGTGAGTAAACTTCCTAAAGGGGTATTTAGAGAGAAGAAGGAATGA

mRNA sequence

ATGGCGGTGGAAGTCGCCGACCAAACTGAACCCATTTCTTCGCCGCCGTCTCACAATTCGGATGCCGGGAAAATTGCCGATTCTCCTCCCTCGCCGCCTGTGGAGGAGGCTCAGGGGTCTAAAATGGTCGACAGCGAGCAGCCTGTTCATCGTGTTCTCGGCGGCGGAAAGCCTGCGGACGTGTTGTTATGGAAGAACAAGAAGATCTCTGCCGGGATTCTCGGCGGAGCCACCGCAATTTGGGCGTTCTTTGAAGTCCTCGAATATCATCTTCTCCCATTGATATGTTACGCCTTGATCTTGGTTGTTGCTCTCTTATTCCTTTGGTCCAACGCTCACATTTTTATCTACAAGAGCCCGCCTCATCTTCCCGAAGTTCGTATCAAAGACGAGCCGTTCCTGCAGGTTGCCTCTGCAGCAAGGACCATGATCAACCGGGCCATTGCAATGTTGGGCGACATAGCATCGGGGAGAGACGTGAAGAAGTTTCTAGCTGTAGTTGCTGGCTTGTGGATTCTATCAGTTATAGGAAGTTGGTGCAATTTTTTGACCTTGTTCTACATCGCGGTCGTATTGCTGCACACGGTACCGGTCGTTTACGAGAAGTACAAGGGTAAGATCGATACGTCTGCACAAAGGATCATGGTCGAGAGTAAAAAGAGGTACGCGGTTTTTAACGAGAAAGTTGTGAGTAAACTTCCTAAAGGGGTATTTAGAGAGAAGAAGGAATGA

Coding sequence (CDS)

ATGGCGGTGGAAGTCGCCGACCAAACTGAACCCATTTCTTCGCCGCCGTCTCACAATTCGGATGCCGGGAAAATTGCCGATTCTCCTCCCTCGCCGCCTGTGGAGGAGGCTCAGGGGTCTAAAATGGTCGACAGCGAGCAGCCTGTTCATCGTGTTCTCGGCGGCGGAAAGCCTGCGGACGTGTTGTTATGGAAGAACAAGAAGATCTCTGCCGGGATTCTCGGCGGAGCCACCGCAATTTGGGCGTTCTTTGAAGTCCTCGAATATCATCTTCTCCCATTGATATGTTACGCCTTGATCTTGGTTGTTGCTCTCTTATTCCTTTGGTCCAACGCTCACATTTTTATCTACAAGAGCCCGCCTCATCTTCCCGAAGTTCGTATCAAAGACGAGCCGTTCCTGCAGGTTGCCTCTGCAGCAAGGACCATGATCAACCGGGCCATTGCAATGTTGGGCGACATAGCATCGGGGAGAGACGTGAAGAAGTTTCTAGCTGTAGTTGCTGGCTTGTGGATTCTATCAGTTATAGGAAGTTGGTGCAATTTTTTGACCTTGTTCTACATCGCGGTCGTATTGCTGCACACGGTACCGGTCGTTTACGAGAAGTACAAGGGTAAGATCGATACGTCTGCACAAAGGATCATGGTCGAGAGTAAAAAGAGGTACGCGGTTTTTAACGAGAAAGTTGTGAGTAAACTTCCTAAAGGGGTATTTAGAGAGAAGAAGGAATGA

Protein sequence

MAVEVADQTEPISSPPSHNSDAGKIADSPPSPPVEEAQGSKMVDSEQPVHRVLGGGKPADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIFIYKSPPHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDVKKFLAVVAGLWILSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPKGVFREKKE

Homology

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BLAST of Carg13848 vs. NCBI nr
Match: XP_022964049.1 (reticulon-like protein B1 [Cucurbita moschata])

HSP 1 Score: 467.2 bits (1201), Expect = 3.3e-128
Identity = 242/243 (99.59%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MAVEVADQTEPISSPPSHNSDAGKIADSPPSPPVEEAQGSKMVDSEQPVHRVLGGGKPAD 60
           MAVEVADQTEP+SSPPSHNSDAGKIADSPPSPPVEEAQGSKMVDSEQPVHRVLGGGKPAD
Sbjct: 13  MAVEVADQTEPLSSPPSHNSDAGKIADSPPSPPVEEAQGSKMVDSEQPVHRVLGGGKPAD 72

Query: 61  VLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIFIYKSP 120
           VLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIFIYKSP
Sbjct: 73  VLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIFIYKSP 132

Query: 121 PHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDVKKFLAVVAGLWILSVIGSWC 180
           PHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDVKKFLAVVAGLWILSVIGSWC
Sbjct: 133 PHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDVKKFLAVVAGLWILSVIGSWC 192

Query: 181 NFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPKGVFRE 240
           NFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPKGVFRE
Sbjct: 193 NFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPKGVFRE 252

Query: 241 KKE 244
           KKE
Sbjct: 253 KKE 255

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BLAST of Carg13848 vs. NCBI nr
Match: XP_023514697.1 (reticulon-like protein B1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 462.6 bits (1189), Expect = 8.2e-127
Identity = 239/243 (98.35%), Postives = 242/243 (99.59%), Query Frame = 0


Query: 1   MAVEVADQTEPISSPPSHNSDAGKIADSPPSPPVEEAQGSKMVDSEQPVHRVLGGGKPAD 60
           MAVEVADQTEP+SSPPSHNSDAGKIADSPPSPPVEEA+GSKMVDSEQPVHRVLGGGKPAD
Sbjct: 13  MAVEVADQTEPLSSPPSHNSDAGKIADSPPSPPVEEAEGSKMVDSEQPVHRVLGGGKPAD 72

Query: 61  VLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIFIYKSP 120
           VLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIFIYK+P
Sbjct: 73  VLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIFIYKTP 132

Query: 121 PHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDVKKFLAVVAGLWILSVIGSWC 180
           PHLPEVRIKDEPFLQVASAARTMINRAIA LGDIASGRDVKKFLAVVAGLWILSVIGSWC
Sbjct: 133 PHLPEVRIKDEPFLQVASAARTMINRAIATLGDIASGRDVKKFLAVVAGLWILSVIGSWC 192

Query: 181 NFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPKGVFRE 240
           NFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPKGVFRE
Sbjct: 193 NFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPKGVFRE 252

Query: 241 KKE 244
           KKE
Sbjct: 253 KKE 255

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BLAST of Carg13848 vs. NCBI nr
Match: XP_023000269.1 (reticulon-like protein B1 [Cucurbita maxima])

HSP 1 Score: 454.1 bits (1167), Expect = 2.9e-124
Identity = 234/243 (96.30%), Postives = 238/243 (97.94%), Query Frame = 0


Query: 1   MAVEVADQTEPISSPPSHNSDAGKIADSPPSPPVEEAQGSKMVDSEQPVHRVLGGGKPAD 60
           MAVEVADQTEP+SSPPSHNSDAGKIADSPPSPPVEEAQGSKMVDSEQPVHRVLGGGKPAD
Sbjct: 13  MAVEVADQTEPLSSPPSHNSDAGKIADSPPSPPVEEAQGSKMVDSEQPVHRVLGGGKPAD 72

Query: 61  VLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIFIYKSP 120
           VLLWKNKKISAG+L GAT IWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIFIYKSP
Sbjct: 73  VLLWKNKKISAGVLCGATVIWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIFIYKSP 132

Query: 121 PHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDVKKFLAVVAGLWILSVIGSWC 180
           PHLPE  IKDEPFLQVASAART+INRAIA LGDIASGRDVKKFLAVVAGLW+LSVIGSWC
Sbjct: 133 PHLPEAHIKDEPFLQVASAARTVINRAIATLGDIASGRDVKKFLAVVAGLWVLSVIGSWC 192

Query: 181 NFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPKGVFRE 240
           NFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPKGVFRE
Sbjct: 193 NFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPKGVFRE 252

Query: 241 KKE 244
           KKE
Sbjct: 253 KKE 255

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BLAST of Carg13848 vs. NCBI nr
Match: KGN45697.1 (hypothetical protein Csa_6G006830 [Cucumis sativus])

HSP 1 Score: 315.5 bits (807), Expect = 1.6e-82
Identity = 164/248 (66.13%), Postives = 199/248 (80.24%), Query Frame = 0


Query: 2   AVEVADQT-----EPISSPPSHNSDAGKIADS-PPSPPVEEAQGSKMVDSEQPVHRVLGG 61
           AVE+AD        PI+  P  +S+  K+  S P SP  E A+ S+M++ +QPVHRVLG 
Sbjct: 12  AVEIADDNINNDQHPITPSPPPSSNFNKMDHSLPLSPEDETAESSQMLEKKQPVHRVLGA 71

Query: 62  GKPADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIF 121
           GK AD LLW++KK+S  ++GGAT +WAFFE+LEYHLLP++CYALI+VVALLFLWSNAHI 
Sbjct: 72  GKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALIVVVALLFLWSNAHIL 131

Query: 122 IYKSPPHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDVKKFLAVVAGLWILSV 181
           IYKSPPHLPEVRI++EPFLQVASA RT INRAIA+L D+ASGRDVKKF+AVV GLW LSV
Sbjct: 132 IYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDVKKFIAVVVGLWFLSV 191

Query: 182 IGSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPK 241
           +G+WCNFLTLFYI VVLLH VPV YEKYK KID+ A++I+ E +K+Y VFNEKV SK  K
Sbjct: 192 VGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRKKYTVFNEKVASKFSK 251

Query: 242 GVFREKKE 244
              R+KK+
Sbjct: 252 EPLRDKKD 259

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BLAST of Carg13848 vs. NCBI nr
Match: XP_008458672.1 (PREDICTED: reticulon-like protein B2 [Cucumis melo])

HSP 1 Score: 313.9 bits (803), Expect = 4.7e-82
Identity = 164/247 (66.40%), Postives = 197/247 (79.76%), Query Frame = 0


Query: 2   AVEVADQT-----EPISSPPSHNSDAGKIADSPPSPPVEEAQGSKMVDSEQPVHRVLGGG 61
           AVE+AD       +PI+  P  +S++ K+  SPP    E A+ S+M+  +QPVHRVLG G
Sbjct: 12  AVEIADDNINNDQQPITPSPPLSSNSDKVDHSPPED--EAAESSEMLRKKQPVHRVLGSG 71

Query: 62  KPADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIFI 121
           K AD  LW++KK+S   +GGAT +WAFFE+LEYHLLP++CYALI+VVALLFLWSNAHIFI
Sbjct: 72  KLADAFLWRDKKVSVAFVGGATIVWAFFELLEYHLLPILCYALIVVVALLFLWSNAHIFI 131

Query: 122 YKSPPHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDVKKFLAVVAGLWILSVI 181
           YKSPPHLPEVRI++EP LQVASAAR  INRAIAML D+ASGRDVKKFLAVV GLW LSV+
Sbjct: 132 YKSPPHLPEVRIREEPLLQVASAARIEINRAIAMLRDVASGRDVKKFLAVVVGLWFLSVV 191

Query: 182 GSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPKG 241
           G  CNFLTLFYI VVLLHTVPV YEKYK KID+  ++I+ ESKK+Y+VFNEKV S+  K 
Sbjct: 192 GKRCNFLTLFYIVVVLLHTVPVFYEKYKYKIDSFMEKIVAESKKKYSVFNEKVASRFSKE 251

Query: 242 VFREKKE 244
             R+KK+
Sbjct: 252 PLRDKKD 256

[Close]

BLAST of Carg13848 vs. TAIR10
Match: AT4G23630.1 (VIRB2-interacting protein 1)

HSP 1 Score: 251.5 bits (641), Expect = 5.2e-67
Identity = 120/203 (59.11%), Postives = 160/203 (78.82%), Query Frame = 0


Query: 41  KMVDSEQPVHRVLGGGKPADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALI 100
           ++   EQPVH+VLGGGKPAD+ +WKNKK+S G+LGGATA W  FE++EYHLL L+C+ +I
Sbjct: 72  RLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMI 131

Query: 101 LVVALLFLWSNAHIFIYKSPPHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDV 160
           +V+A+LFLWSNA +FI KSPP +PEV I +EP LQ+AS  R  INR  + L +IASGRD+
Sbjct: 132 VVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDL 191

Query: 161 KKFLAVVAGLWILSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKK 220
           KKFL  +AGLW+LS++G   NFLTL YIA+VLL TVP+ Y+KY+ K+D   ++ M+E KK
Sbjct: 192 KKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKK 251

Query: 221 RYAVFNEKVVSKLPKGVFREKKE 244
           +YAV +EKV+SK+P G  + KK+
Sbjct: 252 QYAVLDEKVLSKIPLGPLKNKKK 274

[Close]

BLAST of Carg13848 vs. TAIR10
Match: AT4G11220.1 (VIRB2-interacting protein 2)

HSP 1 Score: 245.0 bits (624), Expect = 4.9e-65
Identity = 114/203 (56.16%), Postives = 160/203 (78.82%), Query Frame = 0


Query: 41  KMVDSEQPVHRVLGGGKPADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALI 100
           ++   E+PVH+VLGGGKPAD+ +WK+KK+S G+ GGAT  W  FE++EYHLL L+C+ +I
Sbjct: 68  RLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMI 127

Query: 101 LVVALLFLWSNAHIFIYKSPPHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDV 160
           + +A+LFLWSNA +FI+KSPP +PEV I +EP LQ+AS  R  INR I+ L +IASGRD+
Sbjct: 128 VALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDI 187

Query: 161 KKFLAVVAGLWILSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKK 220
           KKFL+ +AGLW+LS++G   +FLTL YIA+VLL TVP+ Y+KY+ K+D+  ++ M E KK
Sbjct: 188 KKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKK 247

Query: 221 RYAVFNEKVVSKLPKGVFREKKE 244
           +YAV + KV SK+P+G  ++KK+
Sbjct: 248 QYAVLDAKVFSKIPRGPLKDKKK 270

[Close]

BLAST of Carg13848 vs. TAIR10
Match: AT5G41600.1 (VIRB2-interacting protein 3)

HSP 1 Score: 240.4 bits (612), Expect = 1.2e-63
Identity = 116/207 (56.04%), Postives = 154/207 (74.40%), Query Frame = 0


Query: 41  KMVDSEQPVHRVLGGGKPADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALI 100
           ++   E+PVH+VLGGGKPAD+ LW+NKK+S G+LG  TA W  FE+ EYHLL  +C+  I
Sbjct: 51  RLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAI 110

Query: 101 LVVALLFLWSNAHIFIYKSPPHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDV 160
             +A LFLWSNA  FI+KS PH+PEV I ++P LQ+ S  R  INR + +L +IASG+DV
Sbjct: 111 FALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDV 170

Query: 161 KKFLAVVAGLWILSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKK 220
           KKF+ V+AGLW+LS+IGS  NFLTLFY A VLL T+PV+YEKY+ K+D   ++ M E KK
Sbjct: 171 KKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKK 230

Query: 221 RYAVFNE----KVVSKLPKGVFREKKE 244
           +YAV +E    KV+SK+P+G   +KK+
Sbjct: 231 QYAVLDEKVLRKVISKIPRGALNKKKD 257

[Close]

BLAST of Carg13848 vs. TAIR10
Match: AT2G46170.1 (Reticulon family protein)

HSP 1 Score: 234.6 bits (597), Expect = 6.6e-62
Identity = 116/215 (53.95%), Postives = 158/215 (73.49%), Query Frame = 0


Query: 27  DSPPSPPVEEAQGSKMVDSEQPVHRVLGGGKPADVLLWKNKKISAGILGGATAIWAFFEV 86
           + P SP   +A+  +M   E+PVH+VLGGGKPADV LW++KK+S  +LG ATAIW  FE+
Sbjct: 37  EKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFEL 96

Query: 87  LEYHLLPLICYALILVVALLFLWSNAHIFIYKSPPHLPEVRIKDEPFLQVASAARTMINR 146
           +EYHLL L+C+  IL +  LFLWSNAH  I K+ P +PE+ + +E FL VAS+ R  +N+
Sbjct: 97  VEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQ 156

Query: 147 AIAMLGDIASGRDVKKFLAVVAGLWILSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYKGK 206
           A  +L  IA GRD+KKFL VV GLWI+SV+G+W NFLTL YI  V+LHTVP++YEK++ K
Sbjct: 157 AFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDK 216

Query: 207 IDTSAQRIMVESKKRYAVFNEKVVSKLPKGVFREK 242
           +D  A++ M E +K+Y VF+EKV+SK+P    + K
Sbjct: 217 VDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAK 251

[Close]

BLAST of Carg13848 vs. TAIR10
Match: AT1G64090.2 (Reticulan like protein B3)

HSP 1 Score: 214.9 bits (546), Expect = 5.4e-56
Identity = 113/218 (51.83%), Postives = 148/218 (67.89%), Query Frame = 0


Query: 41  KMVDSEQPVHRVLGGGK----------------PADVLLWKNKKISAGILGGATAIWAFF 100
           ++   EQP+H++ GGGK                 AD+ LW+NKK+S G+LG AT  W  F
Sbjct: 47  RLFGREQPLHKLFGGGKHSENQDINERFGLVFAAADIFLWRNKKVSGGVLGAATVSWILF 106

Query: 101 EVLEYHLLPLICYALILVVALLFLWSNAHIFIYKSPPHLPEVRIKDEPFLQVASAARTMI 160
           E+LEY+LL L  +  IL +A+LFLWS+A  FI+KSP H+PEV I ++  LQ+AS  R  I
Sbjct: 107 ELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEI 166

Query: 161 NRAIAMLGDIASGRDVKKFLAVVAGLWILSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYK 220
           NR   +L DIASGRD+KKFL V+AGLW+LS +GS CNFLTL YIA VLL T+PV+YEKY+
Sbjct: 167 NRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYE 226

Query: 221 GKIDTSAQRIMVESKKRYAVFN----EKVVSKLPKGVF 239
            K+D   ++ M E KK+Y  F+     KV+SK+PKG F
Sbjct: 227 DKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPKGAF 264

[Close]

BLAST of Carg13848 vs. Swiss-Prot
Match: sp|Q9SUR3|RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 9.4e-66
Identity = 120/203 (59.11%), Postives = 160/203 (78.82%), Query Frame = 0


Query: 41  KMVDSEQPVHRVLGGGKPADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALI 100
           ++   EQPVH+VLGGGKPAD+ +WKNKK+S G+LGGATA W  FE++EYHLL L+C+ +I
Sbjct: 72  RLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMI 131

Query: 101 LVVALLFLWSNAHIFIYKSPPHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDV 160
           +V+A+LFLWSNA +FI KSPP +PEV I +EP LQ+AS  R  INR  + L +IASGRD+
Sbjct: 132 VVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDL 191

Query: 161 KKFLAVVAGLWILSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKK 220
           KKFL  +AGLW+LS++G   NFLTL YIA+VLL TVP+ Y+KY+ K+D   ++ M+E KK
Sbjct: 192 KKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKK 251

Query: 221 RYAVFNEKVVSKLPKGVFREKKE 244
           +YAV +EKV+SK+P G  + KK+
Sbjct: 252 QYAVLDEKVLSKIPLGPLKNKKK 274

[Close]

BLAST of Carg13848 vs. Swiss-Prot
Match: sp|Q9SUT9|RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 8.8e-64
Identity = 114/203 (56.16%), Postives = 160/203 (78.82%), Query Frame = 0


Query: 41  KMVDSEQPVHRVLGGGKPADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALI 100
           ++   E+PVH+VLGGGKPAD+ +WK+KK+S G+ GGAT  W  FE++EYHLL L+C+ +I
Sbjct: 68  RLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMI 127

Query: 101 LVVALLFLWSNAHIFIYKSPPHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDV 160
           + +A+LFLWSNA +FI+KSPP +PEV I +EP LQ+AS  R  INR I+ L +IASGRD+
Sbjct: 128 VALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDI 187

Query: 161 KKFLAVVAGLWILSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKK 220
           KKFL+ +AGLW+LS++G   +FLTL YIA+VLL TVP+ Y+KY+ K+D+  ++ M E KK
Sbjct: 188 KKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKK 247

Query: 221 RYAVFNEKVVSKLPKGVFREKKE 244
           +YAV + KV SK+P+G  ++KK+
Sbjct: 248 QYAVLDAKVFSKIPRGPLKDKKK 270

[Close]

BLAST of Carg13848 vs. Swiss-Prot
Match: sp|Q9FFS0|RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.2e-62
Identity = 116/207 (56.04%), Postives = 154/207 (74.40%), Query Frame = 0


Query: 41  KMVDSEQPVHRVLGGGKPADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALI 100
           ++   E+PVH+VLGGGKPAD+ LW+NKK+S G+LG  TA W  FE+ EYHLL  +C+  I
Sbjct: 51  RLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAI 110

Query: 101 LVVALLFLWSNAHIFIYKSPPHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDV 160
             +A LFLWSNA  FI+KS PH+PEV I ++P LQ+ S  R  INR + +L +IASG+DV
Sbjct: 111 FALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDV 170

Query: 161 KKFLAVVAGLWILSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKK 220
           KKF+ V+AGLW+LS+IGS  NFLTLFY A VLL T+PV+YEKY+ K+D   ++ M E KK
Sbjct: 171 KKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKK 230

Query: 221 RYAVFNE----KVVSKLPKGVFREKKE 244
           +YAV +E    KV+SK+P+G   +KK+
Sbjct: 231 QYAVLDEKVLRKVISKIPRGALNKKKD 257

[Close]

BLAST of Carg13848 vs. Swiss-Prot
Match: sp|O82352|RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.2e-60
Identity = 116/215 (53.95%), Postives = 158/215 (73.49%), Query Frame = 0


Query: 27  DSPPSPPVEEAQGSKMVDSEQPVHRVLGGGKPADVLLWKNKKISAGILGGATAIWAFFEV 86
           + P SP   +A+  +M   E+PVH+VLGGGKPADV LW++KK+S  +LG ATAIW  FE+
Sbjct: 37  EKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFEL 96

Query: 87  LEYHLLPLICYALILVVALLFLWSNAHIFIYKSPPHLPEVRIKDEPFLQVASAARTMINR 146
           +EYHLL L+C+  IL +  LFLWSNAH  I K+ P +PE+ + +E FL VAS+ R  +N+
Sbjct: 97  VEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQ 156

Query: 147 AIAMLGDIASGRDVKKFLAVVAGLWILSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYKGK 206
           A  +L  IA GRD+KKFL VV GLWI+SV+G+W NFLTL YI  V+LHTVP++YEK++ K
Sbjct: 157 AFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDK 216

Query: 207 IDTSAQRIMVESKKRYAVFNEKVVSKLPKGVFREK 242
           +D  A++ M E +K+Y VF+EKV+SK+P    + K
Sbjct: 217 VDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAK 251

[Close]

BLAST of Carg13848 vs. Swiss-Prot
Match: sp|Q6DBN4|RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.6e-60
Identity = 116/211 (54.98%), Postives = 156/211 (73.93%), Query Frame = 0


Query: 31  SPPVEEAQGSKMVDSEQPVHRVLGGGKPADVLLWKNKKISAGILGGATAIWAFFEVLEYH 90
           SP   +A+  ++   E+PVH+VLGGG PADV LW++KK+SA +LG ATAIW  FE++EYH
Sbjct: 41  SPSALKAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYH 100

Query: 91  LLPLICYALILVVALLFLWSNAHIFIYKSPPHLPEVRIKDEPFLQVASAARTMINRAIAM 150
            L L+C+ LI  +A LFL SNAH F+ K+PP +PE+ IK+E FL + SA R  +N+A  +
Sbjct: 101 FLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVI 160

Query: 151 LGDIASGRDVKKFLAVVAGLWILSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTS 210
           L  IA GRD+KKFL VV GLWI+SV+G+W NFLTL YI  V+LHTVP++YEK++ K+D  
Sbjct: 161 LRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPV 220

Query: 211 AQRIMVESKKRYAVFNEKVVSKLPKGVFREK 242
           A++ + E KK Y VF+EKV+SKLP    + K
Sbjct: 221 AEKTLKELKKHYMVFDEKVLSKLPVASLKAK 251

[Close]

BLAST of Carg13848 vs. TrEMBL
Match: tr|A0A0A0KBC8|A0A0A0KBC8_CUCSA (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G006830 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.1e-82
Identity = 164/248 (66.13%), Postives = 199/248 (80.24%), Query Frame = 0


Query: 2   AVEVADQT-----EPISSPPSHNSDAGKIADS-PPSPPVEEAQGSKMVDSEQPVHRVLGG 61
           AVE+AD        PI+  P  +S+  K+  S P SP  E A+ S+M++ +QPVHRVLG 
Sbjct: 12  AVEIADDNINNDQHPITPSPPPSSNFNKMDHSLPLSPEDETAESSQMLEKKQPVHRVLGA 71

Query: 62  GKPADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIF 121
           GK AD LLW++KK+S  ++GGAT +WAFFE+LEYHLLP++CYALI+VVALLFLWSNAHI 
Sbjct: 72  GKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALIVVVALLFLWSNAHIL 131

Query: 122 IYKSPPHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDVKKFLAVVAGLWILSV 181
           IYKSPPHLPEVRI++EPFLQVASA RT INRAIA+L D+ASGRDVKKF+AVV GLW LSV
Sbjct: 132 IYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDVKKFIAVVVGLWFLSV 191

Query: 182 IGSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPK 241
           +G+WCNFLTLFYI VVLLH VPV YEKYK KID+ A++I+ E +K+Y VFNEKV SK  K
Sbjct: 192 VGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRKKYTVFNEKVASKFSK 251

Query: 242 GVFREKKE 244
              R+KK+
Sbjct: 252 EPLRDKKD 259

[Close]

BLAST of Carg13848 vs. TrEMBL
Match: tr|A0A1S3C9M8|A0A1S3C9M8_CUCME (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103498001 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 3.1e-82
Identity = 164/247 (66.40%), Postives = 197/247 (79.76%), Query Frame = 0


Query: 2   AVEVADQT-----EPISSPPSHNSDAGKIADSPPSPPVEEAQGSKMVDSEQPVHRVLGGG 61
           AVE+AD       +PI+  P  +S++ K+  SPP    E A+ S+M+  +QPVHRVLG G
Sbjct: 12  AVEIADDNINNDQQPITPSPPLSSNSDKVDHSPPED--EAAESSEMLRKKQPVHRVLGSG 71

Query: 62  KPADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIFI 121
           K AD  LW++KK+S   +GGAT +WAFFE+LEYHLLP++CYALI+VVALLFLWSNAHIFI
Sbjct: 72  KLADAFLWRDKKVSVAFVGGATIVWAFFELLEYHLLPILCYALIVVVALLFLWSNAHIFI 131

Query: 122 YKSPPHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDVKKFLAVVAGLWILSVI 181
           YKSPPHLPEVRI++EP LQVASAAR  INRAIAML D+ASGRDVKKFLAVV GLW LSV+
Sbjct: 132 YKSPPHLPEVRIREEPLLQVASAARIEINRAIAMLRDVASGRDVKKFLAVVVGLWFLSVV 191

Query: 182 GSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPKG 241
           G  CNFLTLFYI VVLLHTVPV YEKYK KID+  ++I+ ESKK+Y+VFNEKV S+  K 
Sbjct: 192 GKRCNFLTLFYIVVVLLHTVPVFYEKYKYKIDSFMEKIVAESKKKYSVFNEKVASRFSKE 251

Query: 242 VFREKKE 244
             R+KK+
Sbjct: 252 PLRDKKD 256

[Close]

BLAST of Carg13848 vs. TrEMBL
Match: tr|A0A1U7VFY0|A0A1U7VFY0_NICSY (Reticulon-like protein OS=Nicotiana sylvestris OX=4096 GN=LOC104218233 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.7e-72
Identity = 135/202 (66.83%), Postives = 169/202 (83.66%), Query Frame = 0


Query: 41  KMVDSEQPVHRVLGGGKPADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALI 100
           ++   E+PVH+V GGGKPADV LW+NKKISA +LGGATAIW  FE+LEYHLL LIC+ LI
Sbjct: 63  RLFGREKPVHKVFGGGKPADVFLWRNKKISASVLGGATAIWVLFELLEYHLLTLICHILI 122

Query: 101 LVVALLFLWSNAHIFIYKSPPHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDV 160
           + +A+LFLWSNA  FI K PPH+PE+ +  +PFLQVASA R  INRA+A+L +IASGR++
Sbjct: 123 ISLAVLFLWSNATTFINKKPPHIPEIHLPQDPFLQVASALRIEINRALALLREIASGREL 182

Query: 161 KKFLAVVAGLWILSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKK 220
           KKFL VVAGLWILS++GSWCNFLTLFYI  VLLHTVPV+YEKY+ K+D  A++ M E KK
Sbjct: 183 KKFLGVVAGLWILSIVGSWCNFLTLFYILFVLLHTVPVLYEKYEDKVDPLAEKAMHEIKK 242

Query: 221 RYAVFNEKVVSKLPKGVFREKK 243
           +YAVF+EKV+SK+P+G  ++KK
Sbjct: 243 QYAVFDEKVLSKIPRGPLKDKK 264

[Close]

BLAST of Carg13848 vs. TrEMBL
Match: tr|A0A1S3ZSR5|A0A1S3ZSR5_TOBAC (Reticulon-like protein OS=Nicotiana tabacum OX=4097 GN=LOC107790060 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 3.8e-72
Identity = 134/202 (66.34%), Postives = 169/202 (83.66%), Query Frame = 0


Query: 41  KMVDSEQPVHRVLGGGKPADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALI 100
           ++   E+PVH+V GGGKPADV LW+NKKISA +LGGATAIW  FE+LEYHLL LIC+ LI
Sbjct: 63  RLFGREKPVHKVFGGGKPADVFLWRNKKISASVLGGATAIWVLFELLEYHLLTLICHILI 122

Query: 101 LVVALLFLWSNAHIFIYKSPPHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDV 160
           + +A+LFLWSNA  FI K PPH+PE+ +  +PFLQVASA R  INRA+A+L +IASGR++
Sbjct: 123 ISLAVLFLWSNATTFINKKPPHIPEIHLPQDPFLQVASALRIEINRALALLREIASGREL 182

Query: 161 KKFLAVVAGLWILSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKK 220
           KKFL VVAGLWILS++GSWCNFLTLFYI  VLLHTVPV+YEKY+ K+D  A++ M E KK
Sbjct: 183 KKFLGVVAGLWILSIVGSWCNFLTLFYILFVLLHTVPVLYEKYEDKVDPLAEKAMHEIKK 242

Query: 221 RYAVFNEKVVSKLPKGVFREKK 243
           +YAVF++KV+SK+P+G  ++KK
Sbjct: 243 QYAVFDDKVLSKIPRGPLKDKK 264

[Close]

BLAST of Carg13848 vs. TrEMBL
Match: tr|A0A1S3XRJ9|A0A1S3XRJ9_TOBAC (Reticulon-like protein OS=Nicotiana tabacum OX=4097 GN=LOC107767738 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.0e-72
Identity = 133/202 (65.84%), Postives = 170/202 (84.16%), Query Frame = 0


Query: 41  KMVDSEQPVHRVLGGGKPADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALI 100
           ++   E+PVH+V GGGKPADV LW+NKKISA +LGGATAIW  FE+LEYHLL LIC+ LI
Sbjct: 65  RLFGREKPVHKVFGGGKPADVFLWRNKKISASVLGGATAIWVLFELLEYHLLTLICHILI 124

Query: 101 LVVALLFLWSNAHIFIYKSPPHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDV 160
           + +A+LFLWSNA  FI K PPH+PE+ +  +PFLQVASA R  INRA+A+L +IASGR++
Sbjct: 125 ISLAVLFLWSNATTFINKKPPHIPEIHLPQDPFLQVASALRIEINRALALLREIASGREL 184

Query: 161 KKFLAVVAGLWILSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKK 220
           KKFL VVAGLWI+S++GSWCNFLTLFYI+ VLLHTVPV+YEKY+ K+D  A++ M E KK
Sbjct: 185 KKFLGVVAGLWIISIVGSWCNFLTLFYISFVLLHTVPVLYEKYEDKVDPLAEKAMHEIKK 244

Query: 221 RYAVFNEKVVSKLPKGVFREKK 243
           +YAVF++KV+SK+P+G  ++KK
Sbjct: 245 QYAVFDKKVLSKIPRGPLKDKK 266

The following BLAST results are available for this feature:

BLAST of Carg13848 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964049.1	3.3e-128	99.59	reticulon-like protein B1 [Cucurbita moschata]	[more]
XP_023514697.1	8.2e-127	98.35	reticulon-like protein B1 [Cucurbita pepo subsp. pepo]	[more]
XP_023000269.1	2.9e-124	96.30	reticulon-like protein B1 [Cucurbita maxima]	[more]
KGN45697.1	1.6e-82	66.13	hypothetical protein Csa_6G006830 [Cucumis sativus]	[more]
XP_008458672.1	4.7e-82	66.40	PREDICTED: reticulon-like protein B2 [Cucumis melo]	[more]

BLAST of Carg13848 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23630.1	5.2e-67	59.11	VIRB2-interacting protein 1	[more]
AT4G11220.1	4.9e-65	56.16	VIRB2-interacting protein 2	[more]
AT5G41600.1	1.2e-63	56.04	VIRB2-interacting protein 3	[more]
AT2G46170.1	6.6e-62	53.95	Reticulon family protein	[more]
AT1G64090.2	5.4e-56	51.83	Reticulan like protein B3	[more]

BLAST of Carg13848 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SUR3\|RTNLA_ARATH	9.4e-66	59.11	Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1	[more]
sp\|Q9SUT9\|RTNLB_ARATH	8.8e-64	56.16	Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1	[more]
sp\|Q9FFS0\|RTNLD_ARATH	2.2e-62	56.04	Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1	[more]
sp\|O82352\|RTNLE_ARATH	1.2e-60	53.95	Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1	[more]
sp\|Q6DBN4\|RTNLF_ARATH	2.6e-60	54.98	Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1	[more]

BLAST of Carg13848 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KBC8\|A0A0A0KBC8_CUCSA	1.1e-82	66.13	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G006830 PE=4 SV=1	[more]
tr\|A0A1S3C9M8\|A0A1S3C9M8_CUCME	3.1e-82	66.40	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103498001 PE=4 SV=1	[more]
tr\|A0A1U7VFY0\|A0A1U7VFY0_NICSY	1.7e-72	66.83	Reticulon-like protein OS=Nicotiana sylvestris OX=4096 GN=LOC104218233 PE=4 SV=1	[more]
tr\|A0A1S3ZSR5\|A0A1S3ZSR5_TOBAC	3.8e-72	66.34	Reticulon-like protein OS=Nicotiana tabacum OX=4097 GN=LOC107790060 PE=4 SV=1	[more]
tr\|A0A1S3XRJ9\|A0A1S3XRJ9_TOBAC	5.0e-72	65.84	Reticulon-like protein OS=Nicotiana tabacum OX=4097 GN=LOC107767738 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003388	Reticulon

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13848-RA	Carg13848-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 59..213 e-value: 2.1E-53 score: 180.4
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 58..243 score: 41.769
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	PANTHER	PTHR10994:SF70	RETICULON-LIKE PROTEIN B1-RELATED	coord: 36..242
None	No IPR available	PANTHER	PTHR10994	RETICULON	coord: 36..242

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13848	Cla021200	Watermelon (97103) v1	carwmB0600
Carg13848	Cla006637	Watermelon (97103) v1	carwmB0601
Carg13848	Csa6G006830	Cucumber (Chinese Long) v2	carcuB0630
Carg13848	Csa3G121020	Cucumber (Chinese Long) v2	carcuB0629
Carg13848	MELO3C021178	Melon (DHL92) v3.5.1	carmeB0603
Carg13848	MELO3C006075	Melon (DHL92) v3.5.1	carmeB0607
Carg13848	ClCG06G003390	Watermelon (Charleston Gray)	carwcgB0586
Carg13848	CSPI06G00830	Wild cucumber (PI 183967)	carcpiB0636
Carg13848	CSPI03G08420	Wild cucumber (PI 183967)	carcpiB0635
Carg13848	Cucsa.135800	Cucumber (Gy14) v1	carcgyB0678
Carg13848	CmaCh08G008850	Cucurbita maxima (Rimu)	carcmaB0842
Carg13848	CmoCh08G008580	Cucurbita moschata (Rifu)	carcmoB0820
Carg13848	Lsi09G015990	Bottle gourd (USVL1VR-Ls)	carlsiB545
Carg13848	Cp4.1LG17g03770	Cucurbita pepo (Zucchini)	carcpeB0851
Carg13848	CsGy3G008540	Cucumber (Gy14) v2	carcgybB0601
Carg13848	CsGy6G000900	Cucumber (Gy14) v2	carcgybB0602
Carg13848	MELO3C021178.2	Melon (DHL92) v3.6.1	carmedB0609
Carg13848	MELO3C006075.2	Melon (DHL92) v3.6.1	carmedB0613
Carg13848	CsaV3_6G000910	Cucumber (Chinese Long) v3	carcucB0637
Carg13848	CsaV3_3G008540	Cucumber (Chinese Long) v3	carcucB0636
Carg13848	Cla97C05G081500	Watermelon (97103) v2	carwmbB0627
Carg13848	Cla97C06G112760	Watermelon (97103) v2	carwmbB0628
Carg13848	Bhi12G001861	Wax gourd	carwgoB0713

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg13848	Cucurbita maxima (Rimu)	carcmaB0841
Carg13848	Cucurbita moschata (Rifu)	carcmoB0819
Carg13848	Cucurbita pepo (Zucchini)	carcpeB0850