CsaV3_5G036820 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGAAAAAAAAAAAAAAAACATATATACGCATCCCATAAACTAAAAAGTTAGGAATTCCTAAACCCATAACCCAAAAAATGAAATCTACCCATTTCACTCTCTTTCCTCCCTATCAATCTTTAATTCCATCTCTCTCTCTCTCTCCAGTTGGCCACTACCTATGGAATTATCTCTATCTCTCTAGAATGCTAGTGGTTCTTTTTTCTTTTAGGTTGGTGTCACCCACTACCACCCTTCTTCTTATGTTCAAAAGTCCCTCTGGCCTCAACTTTGATTATTGGTAATGCAGGAAACAAAAGAAGGGTTTCCAAACAAAGATGTTAGCAGGTAAGTAACAAGACTTAGAACTAAGTTTTTTATAAAAAGAAAAAAAAAAAAAAAAGAAAGCAAACTTGAATTTGGGATTGATCATTAGGATGCTATAATCCCTGCTGATTGAGTGATTGACTTCCATCGCCATGGAGATCAAACCCACTCCCTCATCACCACCCACAATTACCTCACTAACACAAACACAAATACAAACCTCCCCTTCTCTTTTATTTAACCACCACCACCAGCTTCCCGACGACAACCCATCTCCCAAAACAAACCCTGTTTCCAACGGAGGAGGCCGGGGACGCCGGCTAAAACGAGACGAATGGAGCGAAGGAGCAGTGTCGATTCTGATAGATGCGTACGAATCAAAATGGAAACTACGAAACAGAGCAAAATTGAAAGGGCATGATTGGGAAGATGTGGCTCGCCATGTGTCTTCAAGATCTAATTTAACCAAATCTTCCAAAACCCATACCCAGTGTAAGAATAAAATTGAGTCTATGAAAAAAAAGTGCCGTCAAGAACCTGCTGACTCTTCTTGGCCTTTGTATCACCGTATTCTGCCTTTGGTTGGAGGAAACACTAATCTCACCCCATCTCCACCGCCCTCTCTTCCGCCGCAAAATTCCCATGGATCCAATGGTGTTGATAACATTAATCCTTCCCCTAAGGTAAATCAATTTCTTTCTTCTTTTTTTCTTTGCCTTTTTTAATCTATCTATTATGGAAATACTTTTATTTTTATGGGTTTTAATTGAAAATTGCATACGTACTCTCATATATATTTTTGCAGATAATATATATATATATATAACACCAGAATAAAACCTTTTTCTTCACACGCTATTACAATTCAATTCTTCCCAATTCCTTCATACTTAGTGTAGCATAATAAGTATATTATTATATTATAAGTTGTTTAGTTTATTAAACTCTAACAATTATCATTAATTTAGATTTCGGTTTCTAAACTAATTGAATTATTCTTATAATTACTTTTTAAATAACATTAACTAGTTTATAAATAAAACACTAATGGTAGCCGAATATATATTAGATGTAATTAAAAAAAATGATGATCGTAGGAAGATGGAGTTGATAATGGAAGAGGAGTAGATGAAGTACTATCAGAGAAAAATGAGAATAATAACAATAGTAAGAAGAAGAAGAAGAAGAAGAAGATGGTAAGGGAGAAGAGTACAGATAGTAGTAGCAGTACTCCAGCTGCAATAATATACAGTAGTAGTGATGAGAAAGAGAAGGGGGTAGCAGCAATGAGGCCTAAATTACAACAATCAAAAATGAAGAAGAAAAAGAGGAGGAGAAGCGGCGAGGTGGATTCATTGGAGCAGATAGCGGGTAGCATACGGTGGTTGGCGGAGGTAGTGGTGCGCTCGGAACAAGCTAGAATGGAGATGATTAAGGATATAGAAAAGATGAGAGCTGAAGCAGAGGCCAAAAGAGGGGAGTTGGATCTCAAAAGAACACAAATCATTGCAAATACTCAATTGGAGATAGCTAAGCTCTTTGCATCTCCTACCAACAAACCTCTTGTTGATCATTCTTCACCACTAAGAATTGCTAGAACTTAATTAAATTCTTTTTGATTTTAAATCCCATAATATATATAATGGGGGATTGGGGCCTGGGGAGGGCATTAAATTATGTTAACTACCTACTACTCTCTCACCCTCTTATACACTTAATTAACTTTAGTAATATTCTAATTATATTACTACCTAGCCCTCCCCCTTTGTTATTCAATGTAAGCTTCCCTCTTTCATTTCAGCATGCATCCTCTAAGAATGCTGTTTTGTTTAAACTTACTTTCAGAATAATTAATAATAAATATAAAGTTTTTATATTATATATTATTACTTACAAACATTTTGATTGCTTCTATTTTATTGTTATAGATTTTGTTATTCATTCTGTT ATGGAGATCAAACCCACTCCCTCATCACCACCCACAATTACCTCACTAACACAAACACAAATACAAACCTCCCCTTCTCTTTTATTTAACCACCACCACCAGCTTCCCGACGACAACCCATCTCCCAAAACAAACCCTGTTTCCAACGGAGGAGGCCGGGGACGCCGGCTAAAACGAGACGAATGGAGCGAAGGAGCAGTGTCGATTCTGATAGATGCGTACGAATCAAAATGGAAACTACGAAACAGAGCAAAATTGAAAGGGCATGATTGGGAAGATGTGGCTCGCCATGTGTCTTCAAGATCTAATTTAACCAAATCTTCCAAAACCCATACCCAGTGTAAGAATAAAATTGAGTCTATGAAAAAAAAGTGCCGTCAAGAACCTGCTGACTCTTCTTGGCCTTTGTATCACCGTATTCTGCCTTTGGTTGGAGGAAACACTAATCTCACCCCATCTCCACCGCCCTCTCTTCCGCCGCAAAATTCCCATGGATCCAATGGTGTTGATAACATTAATCCTTCCCCTAAGGAAGATGGAGTTGATAATGGAAGAGGAGTAGATGAAGTACTATCAGAGAAAAATGAGAATAATAACAATAGTAAGAAGAAGAAGAAGAAGAAGAAGATGGTAAGGGAGAAGAGTACAGATAGTAGTAGCAGTACTCCAGCTGCAATAATATACAGTAGTAGTGATGAGAAAGAGAAGGGGGTAGCAGCAATGAGGCCTAAATTACAACAATCAAAAATGAAGAAGAAAAAGAGGAGGAGAAGCGGCGAGGTGGATTCATTGGAGCAGATAGCGGGTAGCATACGGTGGTTGGCGGAGGTAGTGGTGCGCTCGGAACAAGCTAGAATGGAGATGATTAAGGATATAGAAAAGATGAGAGCTGAAGCAGAGGCCAAAAGAGGGGAGTTGGATCTCAAAAGAACACAAATCATTGCAAATACTCAATTGGAGATAGCTAAGCTCTTTGCATCTCCTACCAACAAACCTCTTGTTGATCATTCTTCACCACTAAGAATTGCTAGAACTTAA ATGGAGATCAAACCCACTCCCTCATCACCACCCACAATTACCTCACTAACACAAACACAAATACAAACCTCCCCTTCTCTTTTATTTAACCACCACCACCAGCTTCCCGACGACAACCCATCTCCCAAAACAAACCCTGTTTCCAACGGAGGAGGCCGGGGACGCCGGCTAAAACGAGACGAATGGAGCGAAGGAGCAGTGTCGATTCTGATAGATGCGTACGAATCAAAATGGAAACTACGAAACAGAGCAAAATTGAAAGGGCATGATTGGGAAGATGTGGCTCGCCATGTGTCTTCAAGATCTAATTTAACCAAATCTTCCAAAACCCATACCCAGTGTAAGAATAAAATTGAGTCTATGAAAAAAAAGTGCCGTCAAGAACCTGCTGACTCTTCTTGGCCTTTGTATCACCGTATTCTGCCTTTGGTTGGAGGAAACACTAATCTCACCCCATCTCCACCGCCCTCTCTTCCGCCGCAAAATTCCCATGGATCCAATGGTGTTGATAACATTAATCCTTCCCCTAAGGAAGATGGAGTTGATAATGGAAGAGGAGTAGATGAAGTACTATCAGAGAAAAATGAGAATAATAACAATAGTAAGAAGAAGAAGAAGAAGAAGAAGATGGTAAGGGAGAAGAGTACAGATAGTAGTAGCAGTACTCCAGCTGCAATAATATACAGTAGTAGTGATGAGAAAGAGAAGGGGGTAGCAGCAATGAGGCCTAAATTACAACAATCAAAAATGAAGAAGAAAAAGAGGAGGAGAAGCGGCGAGGTGGATTCATTGGAGCAGATAGCGGGTAGCATACGGTGGTTGGCGGAGGTAGTGGTGCGCTCGGAACAAGCTAGAATGGAGATGATTAAGGATATAGAAAAGATGAGAGCTGAAGCAGAGGCCAAAAGAGGGGAGTTGGATCTCAAAAGAACACAAATCATTGCAAATACTCAATTGGAGATAGCTAAGCTCTTTGCATCTCCTACCAACAAACCTCTTGTTGATCATTCTTCACCACTAAGAATTGCTAGAACTTAA MEIKPTPSSPPTITSLTQTQIQTSPSLLFNHHHQLPDDNPSPKTNPVSNGGGRGRRLKRDEWSEGAVSILIDAYESKWKLRNRAKLKGHDWEDVARHVSSRSNLTKSSKTHTQCKNKIESMKKKCRQEPADSSWPLYHRILPLVGGNTNLTPSPPPSLPPQNSHGSNGVDNINPSPKEDGVDNGRGVDEVLSEKNENNNNSKKKKKKKKMVREKSTDSSSSTPAAIIYSSSDEKEKGVAAMRPKLQQSKMKKKKRRRSGEVDSLEQIAGSIRWLAEVVVRSEQARMEMIKDIEKMRAEAEAKRGELDLKRTQIIANTQLEIAKLFASPTNKPLVDHSSPLRIART
BLAST of CsaV3_5G036820 vs. NCBI nr
Match: XP_004142481.2 (PREDICTED: trihelix transcription factor ASIL2 [Cucumis sativus] >KGN52325.1 hypothetical protein Csa_5G623880 [Cucumis sativus]) HSP 1 Score: 527.3 bits (1357), Expect = 3.9e-146 Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0
BLAST of CsaV3_5G036820 vs. NCBI nr
Match: XP_008446967.1 (PREDICTED: LOW QUALITY PROTEIN: trihelix transcription factor ASIL2 [Cucumis melo]) HSP 1 Score: 324.7 bits (831), Expect = 3.8e-85 Identity = 275/384 (71.61%), Postives = 281/384 (73.18%), Query Frame = 0
BLAST of CsaV3_5G036820 vs. NCBI nr
Match: XP_022988920.1 (trihelix transcription factor ASIL1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 265.0 bits (676), Expect = 3.6e-67 Identity = 174/314 (55.41%), Postives = 185/314 (58.92%), Query Frame = 0
BLAST of CsaV3_5G036820 vs. NCBI nr
Match: XP_023526851.1 (trihelix transcription factor ASIL1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 262.7 bits (670), Expect = 1.8e-66 Identity = 186/365 (50.96%), Postives = 198/365 (54.25%), Query Frame = 0
BLAST of CsaV3_5G036820 vs. NCBI nr
Match: XP_022957512.1 (trihelix transcription factor ASIL2 [Cucurbita moschata]) HSP 1 Score: 257.7 bits (657), Expect = 5.7e-65 Identity = 185/365 (50.68%), Postives = 196/365 (53.70%), Query Frame = 0
BLAST of CsaV3_5G036820 vs. TAIR10
Match: AT3G54390.1 (sequence-specific DNA binding transcription factors) HSP 1 Score: 206.5 bits (524), Expect = 2.7e-53 Identity = 154/316 (48.73%), Postives = 175/316 (55.38%), Query Frame = 0
BLAST of CsaV3_5G036820 vs. TAIR10
Match: AT3G10030.1 (aspartate/glutamate/uridylate kinase family protein) HSP 1 Score: 77.0 bits (188), Expect = 2.5e-14 Identity = 46/117 (39.32%), Postives = 67/117 (57.26%), Query Frame = 0
BLAST of CsaV3_5G036820 vs. TAIR10
Match: AT5G05550.2 (sequence-specific DNA binding transcription factors) HSP 1 Score: 68.6 bits (166), Expect = 8.9e-12 Identity = 34/91 (37.36%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of CsaV3_5G036820 vs. TAIR10
Match: AT3G14180.1 (sequence-specific DNA binding transcription factors) HSP 1 Score: 66.6 bits (161), Expect = 3.4e-11 Identity = 36/98 (36.73%), Postives = 55/98 (56.12%), Query Frame = 0
BLAST of CsaV3_5G036820 vs. TAIR10
Match: AT1G54060.1 (6B-interacting protein 1-like 1) HSP 1 Score: 61.6 bits (148), Expect = 1.1e-09 Identity = 36/105 (34.29%), Postives = 56/105 (53.33%), Query Frame = 0
BLAST of CsaV3_5G036820 vs. Swiss-Prot
Match: sp|Q9LJG8|ASIL2_ARATH (Trihelix transcription factor ASIL2 OS=Arabidopsis thaliana OX=3702 GN=ASIL2 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 6.1e-10 Identity = 36/98 (36.73%), Postives = 55/98 (56.12%), Query Frame = 0
BLAST of CsaV3_5G036820 vs. Swiss-Prot
Match: sp|Q9SYG2|ASIL1_ARATH (Trihelix transcription factor ASIL1 OS=Arabidopsis thaliana OX=3702 GN=ASIL1 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 2.0e-08 Identity = 36/105 (34.29%), Postives = 56/105 (53.33%), Query Frame = 0
BLAST of CsaV3_5G036820 vs. TrEMBL
Match: tr|A0A0A0KRQ8|A0A0A0KRQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623880 PE=4 SV=1) HSP 1 Score: 527.3 bits (1357), Expect = 2.5e-146 Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0
BLAST of CsaV3_5G036820 vs. TrEMBL
Match: tr|A0A1S3BGZ0|A0A1S3BGZ0_CUCME (LOW QUALITY PROTEIN: trihelix transcription factor ASIL2 OS=Cucumis melo OX=3656 GN=LOC103489520 PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 2.5e-85 Identity = 275/384 (71.61%), Postives = 281/384 (73.18%), Query Frame = 0
BLAST of CsaV3_5G036820 vs. TrEMBL
Match: tr|A0A2P5SRH2|A0A2P5SRH2_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD01311 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.9e-53 Identity = 157/363 (43.25%), Postives = 197/363 (54.27%), Query Frame = 0
BLAST of CsaV3_5G036820 vs. TrEMBL
Match: tr|A0A0D2VUE2|A0A0D2VUE2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G018400 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 2.4e-51 Identity = 170/380 (44.74%), Postives = 203/380 (53.42%), Query Frame = 0
BLAST of CsaV3_5G036820 vs. TrEMBL
Match: tr|A0A0L9UIB2|A0A0L9UIB2_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g004000 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 4.0e-51 Identity = 189/378 (50.00%), Postives = 225/378 (59.52%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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