Cp4.1LG09g04530 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAGTGGTTCTATGTCTCTTTCTCATTCCTCTTATTATTTCTTTCAATTATTTTAGTTTCCAACTAAAACTCCACCATATTCCAAACCGCACCGTACTCGATTTGGTGTTGGAAGATATGACACTAAAAGTTGTAGAGGTGATCGTCTTTTTTATTGAGCCACTGAAGCAGTGCGTCGGACTGTAATCGAACAATTACGGAGGAATGGAATTAATGATAGTTTGATTCGTATAGATTGTAAAGTTGGTGGAACTACTTGTACTTGTTACTGTGTATGTGAGATCGTGAATCTCTCCCTAGCAAACGCGTTGTAAAACTGTGAGACTGATGTCGATATGTATCGAGCCAAAACGGACAATATTTGCTAGTGGTGAGTTTGAGCTGTTACAAATGGTATTAGAGTCAAACACTGGGCGGTGTGTTAACGAGGACGCTAGATCTTCAAGGGGGTGGATTGTGAGATCCCAAATCCCACGTCGATTAGAGAGAGAAACAAAACATTCTTTATAAGGGCGTGGAAACCTCTTCCTAACAAACACGTTTTAAAATAGTGAGACTGACTTCGATATGAAATGAGCCAAAACGAACAATATCTACTAGCGGTGAGTTTGAGTTGTTACAAATGATATCAGAGTCAGACACCAGGCCGTGTGCCAACGAGGATGTTAGGCCCCCAATGGGGCGTGACTTGTGAGATCCCTGATCCCACATCGGTTGGAGAGAGGAACAAAACATTCCTTATAAGGGCGTGGAAACCTCTCCCTATGGAGGTGGATCGTGAGATCCCTGATCCCACATCCGTTGGAGGGAGGAACAAAACATTCCTTATAATCGGTTGGGTTGGGGAGAGGAACAAAACATTCTTTATAATCGGTTGGGTTGGGGAGAGGAACAAAACATTCCTTATAGTCGGTTGGGTTGGAGAGAGGAACAAAACATTCCGGTTGGAGAGAGGAACAAAACATTCGGGTTGGGGAGAGTAACAAAACATTCCTTATATGGGCATGGAAACCTCTCCCTAGCAAACAAAAATCATGAGGTTAACGACGATACTTAACGGGCCAAAACGAACAATATCTGCTAGCAGTGGATTTGAGCTGTTACAAATAGTATCAGAGCTAAACACAAGGCGGCATGCCAGCAAGAACGCTAGGCTCCCAAGAGGGCAACATTCCAGTTGGGGAGAGTAACAAAACATTCCTTATATGGGCATGGAAACCTCTCCCTAGCAAACAAAAATCATGAGGTTAACGACGATACGTAACCCGAACAATATCTGCTAGCAGTGAATTTGAGCTGTTACAAATAGTATCAGAGCCAAACACAAGGCGGCATGCCAGTAAGGACGCTAGGCCCCCAAGAGGGCATGGATTGTGAGATATCAAATCCCACATCGATTGACAATAGGAACAAAACATTTCTTATAAGGGCTTGGAAACCTCTCTCTAGAAAAACGCGTTTTAAAACATGAAACTAACAGAGATGCGTAACAAGCCAAAACGGACAATATCTACTAACGATGGGTTGAAGTTATTAAAGTGTACATAACAAAGATATCTTTTTTTCTATCGATCGTTTATTAGAACAAATCACACAATCTCCCTACCGAAAGAATGTCAACCTTTTGACACTTTTGCCACCTATCTTTCACTCTTTTAATATTATCCATTTTTATGGACCAGACCATAAACCAACAGCTAATATCACGTTCATACTTTTTCTTATAGTCAAAAGTTCAAATCTTCATCATCACGCTCGGGTGCTCGTAAAACGTCTATCGAAATTTAGAATTAATACCCATTTATAGTTGGCCACTAGGAAGATATTCTCCAATTGTCTCTCAACAACGCTAGTGGTCATATTCCCAAAAGCTCAAACCTTTTGGCATTGGAAGATGTTAGCAGCTAATTAACAAAAGGGCAACTTAAAACCTAAACTCCCTCTTGCCCTAGCATGCAAACCCTTCTCTTCCATGGATATCAACCCCACTCCATCTCCACCCATCTCCGACACAAACCACCACCACCCTCTTCCCTCCGCCGCCGCCACGCACGGCGACCCTTCTCCAAAAAAAGCCCTTTCTTCCACGGTCGGCGACCGCCTCAAACGCGACGAATGGAGCGAAGGCGCGGTCGCCACCCTCTTGGAAGCTTATGAATCCAAATGGGTTCTTAGAAATAGAGCCAAACTCAAAGGCCATGATTGGGAAGATGTGGCTCGCCATGTCTCTTCAAGGGCTAACTTCACCAAATCGCCTAAGACTCAAACGCAGTGTAAGAATAAAATTGAGTCCATGAAGAAGCGGTATCGTTCCGAAACGGCCTCCGCCGTTGACGCCGCCGCTGCTTCCTCCTCCTGGCCGTTGTATCATCGCCTTGATCTCTTGCTCCGGGGAAACACTCAACCACCTCCTCTTGCCACGTCGGTGATTCTGGTTGATGCGCCACCGCCACCACCACCACCGCCACCGCCGCCGCCTCCTCCGTCTCCTCCGCCCTTCACGGCTACGCTGAATTGTCTCGGATCTAATGGTGTTGATGGGATTATTCCAAAGGTGATTGATTTCTCTTTTGAACCACTTTTATTGGCTATAGCTCTTTGTCCCTTTTACTTTTTTTTTTTAATTAATAAAATTATTTACAACTTTTATATTTTTTTAAAAAAAATTAAACTTTTAATAATACCCTTAAAACTTTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTAATCTTAAAAAAATTAAAATTAAAAAAATACCATTATTAATAATTTATTTCAAAACTTTAAAAAAATACATTAATATCTTTAAAAAAATTTAATTTTAAAAATACCTAAAACTTTTTTAAAAAAATACAAAATCACCCTTACCGAAAATACATAGAAAGAATTGTCAGTACCACGTTTCTGAAATACCCATAAATTTTTAAAATTAATATTAACACTCGTAATCTTTAAAATAAAGTTAAAAAAAAAGTTTTTAGCCTTAATACCTTTAAAATATAGATATATCGTTTCTGTAAATATAAACTTTTATTTATTATAAAGTTTAAAGGTATTAATGTCATTTTTAAAAGTTTACGAGTATTTTTTAAAAAATATACTACTAACCGTAACTGTATTTTTAAAATTTTCAAGAGGTGAAAGGCATTAATGAAATTTCTAAAAGTTTAAGGGTGTTTTTGAAATACTTTCGAAAGTTTAAAATTATTTTAAAATTTTTTGGAAGAATAGTATTTTTGAAAGTTTTGAGGTATTTTTGAGACAAAATACAATGTTATGAGTTGACATTATTAACAGGAGGATGGAGTTGATGAAACAAGAGTATCAGATAAGGAGGAAAAGAACAAGAACAACAACAACGTTGTAGTGGAGACAGACAGTAGCACACCAGCAATGCCATACAGCGACAACGAGAAGCTAAGATCGAAACAACAACCAAAAGCGAAGAAGACGAAGAAAAAGAAGAAGAAGAAAACGAGGATGTCGGACGAGCTGGATGAGATTGCTAGCAGCATTCGGTGGCTAGCCGAGGTCGTGACGAGGTCGGAGCAAACGAGAATGGAGATGATGAGGGATATCGAAAGGATGAGAGCTGAAGCAGAGGCTAAAAGAGGAGAAATGGATCTGAAAAGAACAGAGATTATTGCTAACACTCAGCTGGAGATTGCTAAGCTCTTTGCAGCTGGTGGCAAGGCTGCTGATTCTTCATCAAGGATTGGGAGGCCCACTTCATTTAATTAA ATGCTAGTGGGCAACTTAAAACCTAAACTCCCTCTTGCCCTAGCATGCAAACCCTTCTCTTCCATGGATATCAACCCCACTCCATCTCCACCCATCTCCGACACAAACCACCACCACCCTCTTCCCTCCGCCGCCGCCACGCACGGCGACCCTTCTCCAAAAAAAGCCCTTTCTTCCACGGTCGGCGACCGCCTCAAACGCGACGAATGGAGCGAAGGCGCGGTCGCCACCCTCTTGGAAGCTTATGAATCCAAATGGGTTCTTAGAAATAGAGCCAAACTCAAAGGCCATGATTGGGAAGATGTGGCTCGCCATGTCTCTTCAAGGGCTAACTTCACCAAATCGCCTAAGACTCAAACGCAGTGTAAGAATAAAATTGAGTCCATGAAGAAGCGGTATCGTTCCGAAACGGCCTCCGCCGTTGACGCCGCCGCTGCTTCCTCCTCCTGGCCGTTGTATCATCGCCTTGATCTCTTGCTCCGGGGAAACACTCAACCACCTCCTCTTGCCACGTCGGTGATTCTGGTTGATGCGCCACCGCCACCACCACCACCGCCACCGCCGCCGCCTCCTCCGTCTCCTCCGCCCTTCACGGCTACGCTGAATTGTCTCGGATCTAATGGTGTTGATGGGATTATTCCAAAGAACAACAACAACGTTGTAGTGGAGACAGACAGTAGCACACCAGCAATGCCATACAGCGACAACGAGAAGCTAAGATCGAAACAACAACCAAAAGCGAAGAAGACGAAGAAAAAGAAGAAGAAGAAAACGAGGATGTCGGACGAGCTGGATGAGATTGCTAGCAGCATTCGGTGGCTAGCCGAGGTCGTGACGAGGTCGGAGCAAACGAGAATGGAGATGATGAGGGATATCGAAAGGATGAGAGCTGAAGCAGAGGCTAAAAGAGGAGAAATGGATCTGAAAAGAACAGAGATTATTGCTAACACTCAGCTGGAGATTGCTAAGCTCTTTGCAGCTGGTGGCAAGGCTGCTGATTCTTCATCAAGGATTGGGAGGCCCACTTCATTTAATTAA ATGCTAGTGGGCAACTTAAAACCTAAACTCCCTCTTGCCCTAGCATGCAAACCCTTCTCTTCCATGGATATCAACCCCACTCCATCTCCACCCATCTCCGACACAAACCACCACCACCCTCTTCCCTCCGCCGCCGCCACGCACGGCGACCCTTCTCCAAAAAAAGCCCTTTCTTCCACGGTCGGCGACCGCCTCAAACGCGACGAATGGAGCGAAGGCGCGGTCGCCACCCTCTTGGAAGCTTATGAATCCAAATGGGTTCTTAGAAATAGAGCCAAACTCAAAGGCCATGATTGGGAAGATGTGGCTCGCCATGTCTCTTCAAGGGCTAACTTCACCAAATCGCCTAAGACTCAAACGCAGTGTAAGAATAAAATTGAGTCCATGAAGAAGCGGTATCGTTCCGAAACGGCCTCCGCCGTTGACGCCGCCGCTGCTTCCTCCTCCTGGCCGTTGTATCATCGCCTTGATCTCTTGCTCCGGGGAAACACTCAACCACCTCCTCTTGCCACGTCGGTGATTCTGGTTGATGCGCCACCGCCACCACCACCACCGCCACCGCCGCCGCCTCCTCCGTCTCCTCCGCCCTTCACGGCTACGCTGAATTGTCTCGGATCTAATGGTGTTGATGGGATTATTCCAAAGAACAACAACAACGTTGTAGTGGAGACAGACAGTAGCACACCAGCAATGCCATACAGCGACAACGAGAAGCTAAGATCGAAACAACAACCAAAAGCGAAGAAGACGAAGAAAAAGAAGAAGAAGAAAACGAGGATGTCGGACGAGCTGGATGAGATTGCTAGCAGCATTCGGTGGCTAGCCGAGGTCGTGACGAGGTCGGAGCAAACGAGAATGGAGATGATGAGGGATATCGAAAGGATGAGAGCTGAAGCAGAGGCTAAAAGAGGAGAAATGGATCTGAAAAGAACAGAGATTATTGCTAACACTCAGCTGGAGATTGCTAAGCTCTTTGCAGCTGGTGGCAAGGCTGCTGATTCTTCATCAAGGATTGGGAGGCCCACTTCATTTAATTAA MLVGNLKPKLPLALACKPFSSMDINPTPSPPISDTNHHHPLPSAAATHGDPSPKKALSSTVGDRLKRDEWSEGAVATLLEAYESKWVLRNRAKLKGHDWEDVARHVSSRANFTKSPKTQTQCKNKIESMKKRYRSETASAVDAAAASSSWPLYHRLDLLLRGNTQPPPLATSVILVDAPPPPPPPPPPPPPPSPPPFTATLNCLGSNGVDGIIPKNNNNVVVETDSSTPAMPYSDNEKLRSKQQPKAKKTKKKKKKKTRMSDELDEIASSIRWLAEVVTRSEQTRMEMMRDIERMRAEAEAKRGEMDLKRTEIIANTQLEIAKLFAAGGKAADSSSRIGRPTSFN
BLAST of Cp4.1LG09g04530 vs. Swiss-Prot
Match: ASIL2_ARATH (Trihelix transcription factor ASIL2 OS=Arabidopsis thaliana GN=ASIL2 PE=2 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 4.4e-13 Identity = 42/107 (39.25%), Postives = 65/107 (60.75%), Query Frame = 1
BLAST of Cp4.1LG09g04530 vs. TrEMBL
Match: A0A067KZW7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24542 PE=4 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 7.7e-81 Identity = 207/348 (59.48%), Postives = 233/348 (66.95%), Query Frame = 1
BLAST of Cp4.1LG09g04530 vs. TrEMBL
Match: B9GLZ4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s06580g PE=4 SV=2) HSP 1 Score: 307.4 bits (786), Expect = 2.2e-80 Identity = 202/314 (64.33%), Postives = 224/314 (71.34%), Query Frame = 1
BLAST of Cp4.1LG09g04530 vs. TrEMBL
Match: B9GWZ5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s19470g PE=4 SV=2) HSP 1 Score: 302.4 bits (773), Expect = 7.2e-79 Identity = 207/360 (57.50%), Postives = 236/360 (65.56%), Query Frame = 1
BLAST of Cp4.1LG09g04530 vs. TrEMBL
Match: B9RG86_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1452080 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 2.7e-78 Identity = 208/357 (58.26%), Postives = 231/357 (64.71%), Query Frame = 1
BLAST of Cp4.1LG09g04530 vs. TrEMBL
Match: M5X048_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007968mg PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 2.7e-78 Identity = 210/359 (58.50%), Postives = 235/359 (65.46%), Query Frame = 1
BLAST of Cp4.1LG09g04530 vs. TAIR10
Match: AT3G54390.1 (AT3G54390.1 sequence-specific DNA binding transcription factors) HSP 1 Score: 264.6 bits (675), Expect = 8.4e-71 Identity = 182/307 (59.28%), Postives = 209/307 (68.08%), Query Frame = 1
BLAST of Cp4.1LG09g04530 vs. TAIR10
Match: AT3G10030.1 (AT3G10030.1 aspartate/glutamate/uridylate kinase family protein) HSP 1 Score: 85.5 bits (210), Expect = 7.0e-17 Identity = 44/105 (41.90%), Postives = 63/105 (60.00%), Query Frame = 1
BLAST of Cp4.1LG09g04530 vs. TAIR10
Match: AT3G14180.1 (AT3G14180.1 sequence-specific DNA binding transcription factors) HSP 1 Score: 77.0 bits (188), Expect = 2.5e-14 Identity = 42/107 (39.25%), Postives = 65/107 (60.75%), Query Frame = 1
BLAST of Cp4.1LG09g04530 vs. TAIR10
Match: AT5G05550.2 (AT5G05550.2 sequence-specific DNA binding transcription factors) HSP 1 Score: 75.5 bits (184), Expect = 7.2e-14 Identity = 73/258 (28.29%), Postives = 122/258 (47.29%), Query Frame = 1
BLAST of Cp4.1LG09g04530 vs. TAIR10
Match: AT3G11100.1 (AT3G11100.1 sequence-specific DNA binding transcription factors) HSP 1 Score: 74.7 bits (182), Expect = 1.2e-13 Identity = 39/95 (41.05%), Postives = 62/95 (65.26%), Query Frame = 1
BLAST of Cp4.1LG09g04530 vs. NCBI nr
Match: gi|802574136|ref|XP_012068677.1| (PREDICTED: trihelix transcription factor ASIL1 [Jatropha curcas]) HSP 1 Score: 308.9 bits (790), Expect = 1.1e-80 Identity = 207/348 (59.48%), Postives = 233/348 (66.95%), Query Frame = 1
BLAST of Cp4.1LG09g04530 vs. NCBI nr
Match: gi|743817472|ref|XP_011020419.1| (PREDICTED: trihelix transcription factor ASIL2-like [Populus euphratica]) HSP 1 Score: 307.4 bits (786), Expect = 3.2e-80 Identity = 209/366 (57.10%), Postives = 238/366 (65.03%), Query Frame = 1
BLAST of Cp4.1LG09g04530 vs. NCBI nr
Match: gi|566147578|ref|XP_002299199.2| (hypothetical protein POPTR_0001s06580g [Populus trichocarpa]) HSP 1 Score: 307.4 bits (786), Expect = 3.2e-80 Identity = 202/314 (64.33%), Postives = 224/314 (71.34%), Query Frame = 1
BLAST of Cp4.1LG09g04530 vs. NCBI nr
Match: gi|743913351|ref|XP_011000583.1| (PREDICTED: trihelix transcription factor ASIL1-like [Populus euphratica]) HSP 1 Score: 304.3 bits (778), Expect = 2.7e-79 Identity = 204/317 (64.35%), Postives = 223/317 (70.35%), Query Frame = 1
BLAST of Cp4.1LG09g04530 vs. NCBI nr
Match: gi|657950470|ref|XP_008348068.1| (PREDICTED: junction-mediating and -regulatory protein-like [Malus domestica]) HSP 1 Score: 302.8 bits (774), Expect = 7.9e-79 Identity = 201/331 (60.73%), Postives = 225/331 (67.98%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|