CsaV3_5G031780 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATAGCCTTCTCCTTCTCGCCTCCTCTGGATCTACACCGCCATCGCCTTCTTCCACAACATCGAACTTTTCCAACTCTTCCCATTTCTTCATACCCATTTCCCCTTTTCCTCAAGAATCAATCCTTCAAAACTTCATCAGCTCCCCTTCATTCCTCACCCACGACATTGGACTCTTCGCTTCTCGATGACCCACTTCGGACTGGTCGATTTCTGACCAACGATGAGTTTGAGAAGCTCAAGTTGCTTGGGGATTTTGGGTATTTTAAGGAATTGGAATCTGGGTTTATTTGGGTTCGGGTTATGAGAGATGATGAACTTGATGCCACTGTTGGGTTACTCGCTGAATCATTTGCAGAGTCAATGTTCTGGCCTTCTAGCTATATTTCTTTGCTGAGGTTTTTGGTTAAACAGTATTTGATTGAAAGAAGGGCTCTGATGCCACACACAGCCACACTTATTGGATTTTATAAACGCAAAGATGCAGATGAAGAAGAGGCTGAACAGTTGGCTGGCACAGTGGAGGTTTGCTTTGATAAGAGAGGTGCTAATGCATCGCCCCCCACTCCCACACCTCCTAAGGATTCGCCTTACATATGCAACATGACAGTTCAAAAGGAGCTTCGGAGGTTTGTTTACTTCACCAATTAGGTTCTGTAATATTTGTTCAGGTTTAACTAGCTACAGTTGTTAATGTATTACTTGCTACAACCCTCAGCATTCTGAACTCTAGGCTTGCCTCTTAGATTGTATCATGCAGAAAAGGAAGCTTTATGATCAGGAATTTAGAATTTGAATAGCATGATCAATCTTATAATAGTTCTACTGGTTTAGCCATTATATTCTCAGTTAAAAAGTTGGAAGTTTGAATGTGGGGATTATATTGGTTAGCGGTATGATATTGTCAACTTTAGGGATAACTCCAGTTTTGTGGAAGGTTTCATCCAAAAGGTCTCATACTGTTGAAGATTCTTGTCTTTACTTATATACCATAAATATTTCTGTTACCTAGTCAATGTGGAACTTAGGTCCATGATAAAGTCTAAGAGTTTAAAGTTGTGGAATTTTCAGGAGGGGTATTGGGTGGCATCTTTTGAAGGCTGGTGAGGAATTGATTTCACAAATGAGTACCTCGAGGGAGGTGTACCTGCATTGTAGAATGATTGACAATGCTCCTTTCAACATGTATACAAAAGCTGGCTATAGCGTTGTGCAGACTGATACCATAATAATCTTGTTGATGCTGCAGAGGCGCAAGCACTTGATGCGCAAGAAGCTTCCTGCCATGACCAGGAGCAGTCCTTCTGAATCAGATGTACCAATTTCTCTTGAAGGATGA ATGGCCATAGCCTTCTCCTTCTCGCCTCCTCTGGATCTACACCGCCATCGCCTTCTTCCACAACATCGAACTTTTCCAACTCTTCCCATTTCTTCATACCCATTTCCCCTTTTCCTCAAGAATCAATCCTTCAAAACTTCATCAGCTCCCCTTCATTCCTCACCCACGACATTGGACTCTTCGCTTCTCGATGACCCACTTCGGACTGGTCGATTTCTGACCAACGATGAGTTTGAGAAGCTCAAGTTGCTTGGGGATTTTGGGTATTTTAAGGAATTGGAATCTGGGTTTATTTGGGTTCGGGTTATGAGAGATGATGAACTTGATGCCACTGTTGGGTTACTCGCTGAATCATTTGCAGAGTCAATGTTCTGGCCTTCTAGCTATATTTCTTTGCTGAGGTTTTTGGTTAAACAGTATTTGATTGAAAGAAGGGCTCTGATGCCACACACAGCCACACTTATTGGATTTTATAAACGCAAAGATGCAGATGAAGAAGAGGCTGAACAGTTGGCTGGCACAGTGGAGGTTTGCTTTGATAAGAGAGGTGCTAATGCATCGCCCCCCACTCCCACACCTCCTAAGGATTCGCCTTACATATGCAACATGACAGTTCAAAAGGAGCTTCGGAGGAGGGGTATTGGGTGGCATCTTTTGAAGGCTGGTGAGGAATTGATTTCACAAATGAGTACCTCGAGGGAGGTGTACCTGCATTGTAGAATGATTGACAATGCTCCTTTCAACATGTATACAAAAGCTGGCTATAGCGTTGTGCAGACTGATACCATAATAATCTTGTTGATGCTGCAGAGGCGCAAGCACTTGATGCGCAAGAAGCTTCCTGCCATGACCAGGAGCAGTCCTTCTGAATCAGATGTACCAATTTCTCTTGAAGGATGA ATGGCCATAGCCTTCTCCTTCTCGCCTCCTCTGGATCTACACCGCCATCGCCTTCTTCCACAACATCGAACTTTTCCAACTCTTCCCATTTCTTCATACCCATTTCCCCTTTTCCTCAAGAATCAATCCTTCAAAACTTCATCAGCTCCCCTTCATTCCTCACCCACGACATTGGACTCTTCGCTTCTCGATGACCCACTTCGGACTGGTCGATTTCTGACCAACGATGAGTTTGAGAAGCTCAAGTTGCTTGGGGATTTTGGGTATTTTAAGGAATTGGAATCTGGGTTTATTTGGGTTCGGGTTATGAGAGATGATGAACTTGATGCCACTGTTGGGTTACTCGCTGAATCATTTGCAGAGTCAATGTTCTGGCCTTCTAGCTATATTTCTTTGCTGAGGTTTTTGGTTAAACAGTATTTGATTGAAAGAAGGGCTCTGATGCCACACACAGCCACACTTATTGGATTTTATAAACGCAAAGATGCAGATGAAGAAGAGGCTGAACAGTTGGCTGGCACAGTGGAGGTTTGCTTTGATAAGAGAGGTGCTAATGCATCGCCCCCCACTCCCACACCTCCTAAGGATTCGCCTTACATATGCAACATGACAGTTCAAAAGGAGCTTCGGAGGAGGGGTATTGGGTGGCATCTTTTGAAGGCTGGTGAGGAATTGATTTCACAAATGAGTACCTCGAGGGAGGTGTACCTGCATTGTAGAATGATTGACAATGCTCCTTTCAACATGTATACAAAAGCTGGCTATAGCGTTGTGCAGACTGATACCATAATAATCTTGTTGATGCTGCAGAGGCGCAAGCACTTGATGCGCAAGAAGCTTCCTGCCATGACCAGGAGCAGTCCTTCTGAATCAGATGTACCAATTTCTCTTGAAGGATGA MAIAFSFSPPLDLHRHRLLPQHRTFPTLPISSYPFPLFLKNQSFKTSSAPLHSSPTTLDSSLLDDPLRTGRFLTNDEFEKLKLLGDFGYFKELESGFIWVRVMRDDELDATVGLLAESFAESMFWPSSYISLLRFLVKQYLIERRALMPHTATLIGFYKRKDADEEEAEQLAGTVEVCFDKRGANASPPTPTPPKDSPYICNMTVQKELRRRGIGWHLLKAGEELISQMSTSREVYLHCRMIDNAPFNMYTKAGYSVVQTDTIIILLMLQRRKHLMRKKLPAMTRSSPSESDVPISLEG
BLAST of CsaV3_5G031780 vs. NCBI nr
Match: XP_004135226.1 (PREDICTED: uncharacterized protein LOC101210740 [Cucumis sativus] >KGN51828.1 hypothetical protein Csa_5G602760 [Cucumis sativus]) HSP 1 Score: 602.8 bits (1553), Expect = 6.3e-169 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
BLAST of CsaV3_5G031780 vs. NCBI nr
Match: XP_008446240.1 (PREDICTED: uncharacterized protein LOC103489030 [Cucumis melo]) HSP 1 Score: 573.5 bits (1477), Expect = 4.1e-160 Identity = 288/298 (96.64%), Postives = 289/298 (96.98%), Query Frame = 0
BLAST of CsaV3_5G031780 vs. NCBI nr
Match: XP_023532089.1 (uncharacterized protein LOC111793978 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 508.8 bits (1309), Expect = 1.2e-140 Identity = 261/304 (85.86%), Postives = 277/304 (91.12%), Query Frame = 0
BLAST of CsaV3_5G031780 vs. NCBI nr
Match: XP_022975848.1 (uncharacterized protein LOC111476424 [Cucurbita maxima]) HSP 1 Score: 505.4 bits (1300), Expect = 1.4e-139 Identity = 259/304 (85.20%), Postives = 274/304 (90.13%), Query Frame = 0
BLAST of CsaV3_5G031780 vs. NCBI nr
Match: XP_022957170.1 (uncharacterized protein LOC111458641 [Cucurbita moschata]) HSP 1 Score: 504.2 bits (1297), Expect = 3.0e-139 Identity = 258/304 (84.87%), Postives = 275/304 (90.46%), Query Frame = 0
BLAST of CsaV3_5G031780 vs. TAIR10
Match: AT1G24040.1 (Acyl-CoA N-acyltransferases (NAT) superfamily protein) HSP 1 Score: 331.3 bits (848), Expect = 6.4e-91 Identity = 159/232 (68.53%), Postives = 194/232 (83.62%), Query Frame = 0
BLAST of CsaV3_5G031780 vs. TrEMBL
Match: tr|A0A0A0KQC0|A0A0A0KQC0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G602760 PE=4 SV=1) HSP 1 Score: 602.8 bits (1553), Expect = 4.1e-169 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
BLAST of CsaV3_5G031780 vs. TrEMBL
Match: tr|A0A1S3BF90|A0A1S3BF90_CUCME (uncharacterized protein LOC103489030 OS=Cucumis melo OX=3656 GN=LOC103489030 PE=4 SV=1) HSP 1 Score: 573.5 bits (1477), Expect = 2.7e-160 Identity = 288/298 (96.64%), Postives = 289/298 (96.98%), Query Frame = 0
BLAST of CsaV3_5G031780 vs. TrEMBL
Match: tr|A0A2I4E1N0|A0A2I4E1N0_9ROSI (uncharacterized protein LOC108985451 isoform X1 OS=Juglans regia OX=51240 GN=LOC108985451 PE=4 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 1.5e-97 Identity = 194/302 (64.24%), Postives = 228/302 (75.50%), Query Frame = 0
BLAST of CsaV3_5G031780 vs. TrEMBL
Match: tr|V4TEI7|V4TEI7_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10032202mg PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 7.5e-94 Identity = 195/305 (63.93%), Postives = 222/305 (72.79%), Query Frame = 0
BLAST of CsaV3_5G031780 vs. TrEMBL
Match: tr|A0A2P4MKT9|A0A2P4MKT9_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_62376 PE=4 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 2.8e-93 Identity = 185/298 (62.08%), Postives = 211/298 (70.81%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |