CmoCh04G016580 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATATTAAGTTTTTTTGTGTTTTATGGTCCATGAATTTTAGTGTTTTTGACTTGATTAGCATTATTCCACGAATCGATGTTTAATTAATAATCCGCGATGACAATACAATCGAATCTTATCGATTCCCCTGAAATTAGCGAGCTCTGCATTCTATGGCCATAGCCTCCTCCTTCTCGTTCCCTTTGGATCTACACCGCCATCGCCTTCTTCCGCGCCACTTCATACACCATCGATCTTTTCCCGCTCTGCCCATTTCTTCGTACCCATTTCCCCTTTTGCTCAAAACTCAGAATCAGTTCTTCAAAACCTCATCCGCTCCCCTTCGTTCATCGCCCACGACATTGGATTCTTCGCTTCTCGAAGACCCACTTCGGACTGGTCGATTTCTGACCGACGATGAGTACGAGAGGCTCAAGTTTCTTGGGGATTTTGAGTATTTCCAGGAATTGGAATCTGGGTCGATGTGGGTTCGGGTTATGAGGGATTGTGAACTTGATGCCACTGTTGGGTTGCTAGCGGAGTCATTTGCGGAGTCCATGTTCTGGCCTTCTGGCTATATTTCTTTGCTGAGATTTTTGGTGAAACAGTATTTGATTGAACGAAGGGCCTTGATGCCCCATGCCGCTACACTTATTGGGTTTTATAAAGGCAAAAATGGGGAAGAAGAGGAGGCTGAAGAGCTGGCCGGCACAGTGGAGGTGTCCTTTGACAAGCGAGGTGCCAATGCATCTCCCCCCACTCCTACACCTCCCAAGGATTCGCCTTACATATGCAACATGACTGTTAAAAAGGAGCTTCGGAGGTATGTTTACTTCACAATTATGTCTGCAACCATTTGTTCATGTTCAACTGGCTATAATTGTTAAGGCTTAGCTTGCTATAATCCTCACCATTCTGAACTGGGTTTGTCCCTGAGATTGCATCAAGTATAATAGACTCATATTAGGTGAAATTGTGGAACTTTCAGGAGGGGTATTGGGTGGCATCTTTTGAAGGCTGGTGAGGAATTGATCTCACAAATGAGTACCTCAAGGGAGGTGTTCCTGCATTGTAGAATGATTGACACAGCTCCTTTCAATATGTATACAAAAGCTGGCTACACCGTTGTGCAGACGGATACCATAATAAGCTTGTTGATGCTGCAGAGGCGCAAGCACTTGATGTGCAAGGAGCTTCCTGCCATCACCATGCGCAGTCCTGAGTCAGATGCACCATTTTCTGTTGAGGAATGAATTTGCTATTTGCATAGACAAATTGTTCCACGTTCTGCTGAGGTGAATAACATATTTTCCTTTTTCCTCCGTAAAGCTAAGGTTTGCAACTAAATTACTCTGTACATATTTGTAGATTAGATACTGTGTGAATGTTTGATTAATCCACCACACCTAAATGGTGTGAAAGTTATCTTATTTATAATCAAATAAATTACAAGAATATGGAAATAGTAATAAATGGAAATAACAATAAATGGAAAGATACCTATAGTAATAAGGCA GATATTAAGTTTTTTTGTGTTTTATGGTCCATGAATTTTAGTGTTTTTGACTTGATTAGCATTATTCCACGAATCGATGTTTAATTAATAATCCGCGATGACAATACAATCGAATCTTATCGATTCCCCTGAAATTAGCGAGCTCTGCATTCTATGGCCATAGCCTCCTCCTTCTCGTTCCCTTTGGATCTACACCGCCATCGCCTTCTTCCGCGCCACTTCATACACCATCGATCTTTTCCCGCTCTGCCCATTTCTTCGTACCCATTTCCCCTTTTGCTCAAAACTCAGAATCAGTTCTTCAAAACCTCATCCGCTCCCCTTCGTTCATCGCCCACGACATTGGATTCTTCGCTTCTCGAAGACCCACTTCGGACTGGTCGATTTCTGACCGACGATGAGTACGAGAGGCTCAAGTTTCTTGGGGATTTTGAGTATTTCCAGGAATTGGAATCTGGGTCGATGTGGGTTCGGGTTATGAGGGATTGTGAACTTGATGCCACTGTTGGGTTGCTAGCGGAGTCATTTGCGGAGTCCATGTTCTGGCCTTCTGGCTATATTTCTTTGCTGAGATTTTTGGTGAAACAGTATTTGATTGAACGAAGGGCCTTGATGCCCCATGCCGCTACACTTATTGGGTTTTATAAAGGCAAAAATGGGGAAGAAGAGGAGGCTGAAGAGCTGGCCGGCACAGTGGAGGTGTCCTTTGACAAGCGAGGTGCCAATGCATCTCCCCCCACTCCTACACCTCCCAAGGATTCGCCTTACATATGCAACATGACTGTTAAAAAGGAGCTTCGGAGGAGGGGTATTGGGTGGCATCTTTTGAAGGCTGGTGAGGAATTGATCTCACAAATGAGTACCTCAAGGGAGGTGTTCCTGCATTGTAGAATGATTGACACAGCTCCTTTCAATATGTATACAAAAGCTGGCTACACCGTTGTGCAGACGGATACCATAATAAGCTTGTTGATGCTGCAGAGGCGCAAGCACTTGATGTGCAAGGAGCTTCCTGCCATCACCATGCGCAGTCCTGAGTCAGATGCACCATTTTCTGTTGAGGAATGAATTTGCTATTTGCATAGACAAATTGTTCCACGTTCTGCTGAGGTGAATAACATATTTTCCTTTTTCCTCCGTAAAGCTAAGGTTTGCAACTAAATTACTCTGTACATATTTGTAGATTAGATACTGTGTGAATGTTTGATTAATCCACCACACCTAAATGGTGTGAAAGTTATCTTATTTATAATCAAATAAATTACAAGAATATGGAAATAGTAATAAATGGAAATAACAATAAATGGAAAGATACCTATAGTAATAAGGCA ATGGCCATAGCCTCCTCCTTCTCGTTCCCTTTGGATCTACACCGCCATCGCCTTCTTCCGCGCCACTTCATACACCATCGATCTTTTCCCGCTCTGCCCATTTCTTCGTACCCATTTCCCCTTTTGCTCAAAACTCAGAATCAGTTCTTCAAAACCTCATCCGCTCCCCTTCGTTCATCGCCCACGACATTGGATTCTTCGCTTCTCGAAGACCCACTTCGGACTGGTCGATTTCTGACCGACGATGAGTACGAGAGGCTCAAGTTTCTTGGGGATTTTGAGTATTTCCAGGAATTGGAATCTGGGTCGATGTGGGTTCGGGTTATGAGGGATTGTGAACTTGATGCCACTGTTGGGTTGCTAGCGGAGTCATTTGCGGAGTCCATGTTCTGGCCTTCTGGCTATATTTCTTTGCTGAGATTTTTGGTGAAACAGTATTTGATTGAACGAAGGGCCTTGATGCCCCATGCCGCTACACTTATTGGGTTTTATAAAGGCAAAAATGGGGAAGAAGAGGAGGCTGAAGAGCTGGCCGGCACAGTGGAGGTGTCCTTTGACAAGCGAGGTGCCAATGCATCTCCCCCCACTCCTACACCTCCCAAGGATTCGCCTTACATATGCAACATGACTGTTAAAAAGGAGCTTCGGAGGAGGGGTATTGGGTGGCATCTTTTGAAGGCTGGTGAGGAATTGATCTCACAAATGAGTACCTCAAGGGAGGTGTTCCTGCATTGTAGAATGATTGACACAGCTCCTTTCAATATGTATACAAAAGCTGGCTACACCGTTGTGCAGACGGATACCATAATAAGCTTGTTGATGCTGCAGAGGCGCAAGCACTTGATGTGCAAGGAGCTTCCTGCCATCACCATGCGCAGTCCTGAGTCAGATGCACCATTTTCTGTTGAGGAATGA
BLAST of CmoCh04G016580 vs. TrEMBL
Match: A0A0A0KQC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G602760 PE=4 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 3.2e-139 Identity = 258/304 (84.87%), Postives = 275/304 (90.46%), Query Frame = 1
BLAST of CmoCh04G016580 vs. TrEMBL
Match: M0ZYA6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400004132 PE=4 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 4.4e-96 Identity = 192/313 (61.34%), Postives = 231/313 (73.80%), Query Frame = 1
BLAST of CmoCh04G016580 vs. TrEMBL
Match: V4TEI7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032202mg PE=4 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 1.3e-92 Identity = 199/312 (63.78%), Postives = 226/312 (72.44%), Query Frame = 1
BLAST of CmoCh04G016580 vs. TrEMBL
Match: W9RL19_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027821 PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 1.1e-91 Identity = 195/322 (60.56%), Postives = 226/322 (70.19%), Query Frame = 1
BLAST of CmoCh04G016580 vs. TrEMBL
Match: A0A067GV42_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021820mg PE=4 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 1.5e-91 Identity = 198/313 (63.26%), Postives = 226/313 (72.20%), Query Frame = 1
BLAST of CmoCh04G016580 vs. TAIR10
Match: AT1G24040.1 (AT1G24040.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein) HSP 1 Score: 320.9 bits (821), Expect = 8.7e-88 Identity = 159/232 (68.53%), Postives = 193/232 (83.19%), Query Frame = 1
BLAST of CmoCh04G016580 vs. NCBI nr
Match: gi|449434885|ref|XP_004135226.1| (PREDICTED: uncharacterized protein LOC101210740 [Cucumis sativus]) HSP 1 Score: 502.7 bits (1293), Expect = 4.6e-139 Identity = 258/304 (84.87%), Postives = 275/304 (90.46%), Query Frame = 1
BLAST of CmoCh04G016580 vs. NCBI nr
Match: gi|659090858|ref|XP_008446240.1| (PREDICTED: uncharacterized protein LOC103489030 [Cucumis melo]) HSP 1 Score: 496.9 bits (1278), Expect = 2.5e-137 Identity = 259/305 (84.92%), Postives = 274/305 (89.84%), Query Frame = 1
BLAST of CmoCh04G016580 vs. NCBI nr
Match: gi|698560477|ref|XP_009771863.1| (PREDICTED: uncharacterized protein LOC104222332 [Nicotiana sylvestris]) HSP 1 Score: 359.8 bits (922), Expect = 4.8e-96 Identity = 188/308 (61.04%), Postives = 229/308 (74.35%), Query Frame = 1
BLAST of CmoCh04G016580 vs. NCBI nr
Match: gi|565379054|ref|XP_006355958.1| (PREDICTED: uncharacterized protein LOC102582103 [Solanum tuberosum]) HSP 1 Score: 359.4 bits (921), Expect = 6.3e-96 Identity = 192/313 (61.34%), Postives = 231/313 (73.80%), Query Frame = 1
BLAST of CmoCh04G016580 vs. NCBI nr
Match: gi|645280495|ref|XP_008245211.1| (PREDICTED: uncharacterized protein LOC103343323 [Prunus mume]) HSP 1 Score: 354.0 bits (907), Expect = 2.6e-94 Identity = 201/348 (57.76%), Postives = 233/348 (66.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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