CsaV3_5G029410 (gene) Cucumber (Chinese Long) v3

NameCsaV3_5G029410
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat
Locationchr5 : 24388702 .. 24391581 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGAAGAAAAAGAAAACACTTTCATAACTTTAGAAAGTTGGAATGAATGATTCAAAGCTATGAATTATTAAGAATTAGGATGTAAATTTGGTTTGAGTGGTAGAGATTATTATTAAACATAAGATGGAAATTTTGGACGGAAGAAATAAAATGAAGAATTGTGCAAAAATCATAGATAGAAGAAAGAGGACATGAGGTCGTCCTCTGTTCCACCCATCGCCATTGTCAAAGCTCACAATCAAACCCCATTGAAATCAAGCTCAATTACCATTCCATCATCTCCTCTTCCATTTCACACTCTTTCGGAACGAGCCCATATCCCCTCTCATGTCTACAAGCACCCAGCCGCTGTTCTTCTCGAGCTCTGCACTTCTATGAAAGAGCTCCACCAAATTATCCCTCTAGTCATAAAAAATGGCCTCTACAACGAACACCTTTTTCAAACCAAGCTCGTCAGCTTATTCTCCAAGTATGGCAGCATCAACGAGGCTGCTCGTGTTTTCGAGCCAATAGATGACAAACTTGACGCTCTTTACCACACGATGTTAAAAGGGTATGCGAAGAACTCGTCGTTGGAGACTGCACTTGCTTTTCTTTGTCGTATGAGGTACGATGATGTTAAGCCTGTTGTGTATAATTTTACTTATTTGTTGAAGGTTTGTGGCGATAACGCGGATTTAAAGAGGGGAAAGGAGATTCATGGGCAGCTAATTACGAATTCGTTTGCGGCTAATGTGTTTGCAATGACCGGCGTTGTGAATATGTACGCTAAGTGCAGGCAGATTGATGATGCGTACAAGATGTTTGACAGAATGCCCGAGAGAGATTTGGTTTCTTGGAATACGATTATAGCTGGTTTTTCTCAAAATGGGTTTGCTAAAAAGGCGTTGGAGTTGGTTTTAAGAATGCAGGATGAAGGCCAAAGGCCTGATTCGATTACCTTGGTTACTGTTTTGCCTGCTGCTGCTGATGTTGGATTGTTAATGGTGGGGAAGTCAATTCATGGATATGCCATTAGAGCTGGGTTTGCAAAGCTTGTTAACATTTCAACTGCTTTGGCTGATATGTACTCAAAGTGCGGGTCAGTGGAGACAGCTAGATTGATTTTTGATGGAATGGATCAAAAAACTGTTGTGTCATGGAATTCCATGATGGATGGATATGTTCAAAATGGTGAACCGGAGAAGGCTATTGCAGTTTTTGAGAAGATGTTGGAAGAAGGGATAGACCCAACCGGTGTAACCATTATGGAAGCTTTGCATGCCTGTGCTGATTTGGGTGATCTTGAGAGGGGGAAGTTTGTTCATAAGTTTGTGGATCAGTTAAATCTTGGTTCTGACATCTCTGTAATGAACTCATTGATTTCCATGTATTCCAAGTGTAAGAGAGTTGACATAGCTTCTGACATTTTCAACAACTTAAATGGAAGAACACATGTCTCATGGAATGCCATGATATTGGGTTATGCTCAGAATGGAAGAGTGAGTGAGGCTTTGAACTGTTTTTCTGAAATGAAATCTCTAGGTATGAAACCTGATTCATTCACAATGGTAAGTGTGATACCTGCTCTTGCAGAATTATCAGTTACTCGCCATGCAAAATGGATTCACGGGCTAATTATTAGATCTTGTTTGGACAAAAATATTTTTGTGACAACCGCTCTTGTGGACATGTATTCAAAATGTGGAGCGATTCATATGGCAAGGAAGCTTTTCGACATGATCAGTGACCGACATGTCATAACATGGAATGCGATGATAGATGGGTATGGAACACACGGTCTTGGAAGAGCTGCTCTAGATCTCTTTGATAAAATGAAAAAGGGAGCAGTTGAACCAAATGATATTACATATTTATCTGTCATCTCTGCTTGCAGTCACTCAGGTCTGGTGGACGAAGGACTTCGCCATTTCAAGAGCATGAAACAAGACTATGGATTAGAACCTTCAATGGATCACTATGGCGCTATGGTCGATCTTCTTGGTCGAGCTGGCAGGATCAAAGAAGCCTGGGATTTTATAGAAAACATGCCTATTAGTCCAGGGATTACTGTGTATGGTGCCATGTTGGGTGCTTGTAAAATTCACAAAAATATTGAAGTTGGAGAGAAAGCAGCTAAAAAATTGTTTGAGTTGAACCCTGATGAAGGTGGCTACCATGTCTTGCTTGCAAACATTTATGCTTCTACTTCAAAATGGAGTAAGGTAGCCGAAGTAAGAAAAACAATGGAGAAGAAAGGGCTTAAGAAAACTCCTGGTTGTAGCGTGGTGGAATTGAGAAATGAAGTTCATTCCTTCTATTCAGGGAGCACAACTCATCCACAATCCAAGAGAATTTATGCCTTTCTTGAAGAACTTGTGTATGAAATCAAGGCAGCAGGCTATGTGCCCGACACTAACTTGATTCTCGACGTAGAGGACGATGTGCAGGAGCAGCTTCTCAATAGCCATAGTGAGAAGCTCGCCATTGCTTTTGGTCTTTTAAATACTAGTCCCGGTACTACGATACATGTCCGAAAGAACCTACGAGTTTGTGGTGATTGTCACAATGCAACCAAGTATATCTCACTAGTGACTGGAAGAGAGATCATAGTAAGAGATATGCAAAGATTTCACCATTTCAAAAATGGAATTTGTTCTTGTGGGGATTATTGGTGAACTCTAAGCCTACGTTCTCGTCCTTGTTAGTTATACCGGGAAAGAAGTAAAACTGTTTGAAAAGAATTCTTTTGTTTAAACTATTTATATTATTATTAAGGATTACAATCTTCTATTTTTTTTTTAGGTTTTACATCGTCAAGAACTCATAATTTCTTAAGAGATTTAACAAAACCACTCATTAAATCGAAGGTAAACAAATAATACAATAGAGGTTTCGTT

mRNA sequence

ATGAGGTCGTCCTCTGTTCCACCCATCGCCATTGTCAAAGCTCACAATCAAACCCCATTGAAATCAAGCTCAATTACCATTCCATCATCTCCTCTTCCATTTCACACTCTTTCGGAACGAGCCCATATCCCCTCTCATGTCTACAAGCACCCAGCCGCTGTTCTTCTCGAGCTCTGCACTTCTATGAAAGAGCTCCACCAAATTATCCCTCTAGTCATAAAAAATGGCCTCTACAACGAACACCTTTTTCAAACCAAGCTCGTCAGCTTATTCTCCAAGTATGGCAGCATCAACGAGGCTGCTCGTGTTTTCGAGCCAATAGATGACAAACTTGACGCTCTTTACCACACGATGTTAAAAGGGTATGCGAAGAACTCGTCGTTGGAGACTGCACTTGCTTTTCTTTGTCGTATGAGGTACGATGATGTTAAGCCTGTTGTGTATAATTTTACTTATTTGTTGAAGGTTTGTGGCGATAACGCGGATTTAAAGAGGGGAAAGGAGATTCATGGGCAGCTAATTACGAATTCGTTTGCGGCTAATGTGTTTGCAATGACCGGCGTTGTGAATATGTACGCTAAGTGCAGGCAGATTGATGATGCGTACAAGATGTTTGACAGAATGCCCGAGAGAGATTTGGTTTCTTGGAATACGATTATAGCTGGTTTTTCTCAAAATGGGTTTGCTAAAAAGGCGTTGGAGTTGGTTTTAAGAATGCAGGATGAAGGCCAAAGGCCTGATTCGATTACCTTGGTTACTGTTTTGCCTGCTGCTGCTGATGTTGGATTGTTAATGGTGGGGAAGTCAATTCATGGATATGCCATTAGAGCTGGGTTTGCAAAGCTTGTTAACATTTCAACTGCTTTGGCTGATATGTACTCAAAGTGCGGGTCAGTGGAGACAGCTAGATTGATTTTTGATGGAATGGATCAAAAAACTGTTGTGTCATGGAATTCCATGATGGATGGATATGTTCAAAATGGTGAACCGGAGAAGGCTATTGCAGTTTTTGAGAAGATGTTGGAAGAAGGGATAGACCCAACCGGTGTAACCATTATGGAAGCTTTGCATGCCTGTGCTGATTTGGGTGATCTTGAGAGGGGGAAGTTTGTTCATAAGTTTGTGGATCAGTTAAATCTTGGTTCTGACATCTCTGTAATGAACTCATTGATTTCCATGTATTCCAAGTGTAAGAGAGTTGACATAGCTTCTGACATTTTCAACAACTTAAATGGAAGAACACATGTCTCATGGAATGCCATGATATTGGGTTATGCTCAGAATGGAAGAGTGAGTGAGGCTTTGAACTGTTTTTCTGAAATGAAATCTCTAGGTATGAAACCTGATTCATTCACAATGGTAAGTGTGATACCTGCTCTTGCAGAATTATCAGTTACTCGCCATGCAAAATGGATTCACGGGCTAATTATTAGATCTTGTTTGGACAAAAATATTTTTGTGACAACCGCTCTTGTGGACATGTATTCAAAATGTGGAGCGATTCATATGGCAAGGAAGCTTTTCGACATGATCAGTGACCGACATGTCATAACATGGAATGCGATGATAGATGGGTATGGAACACACGGTCTTGGAAGAGCTGCTCTAGATCTCTTTGATAAAATGAAAAAGGGAGCAGTTGAACCAAATGATATTACATATTTATCTGTCATCTCTGCTTGCAGTCACTCAGGTCTGGTGGACGAAGGACTTCGCCATTTCAAGAGCATGAAACAAGACTATGGATTAGAACCTTCAATGGATCACTATGGCGCTATGGTCGATCTTCTTGGTCGAGCTGGCAGGATCAAAGAAGCCTGGGATTTTATAGAAAACATGCCTATTAGTCCAGGGATTACTGTGTATGGTGCCATGTTGGGTGCTTGTAAAATTCACAAAAATATTGAAGTTGGAGAGAAAGCAGCTAAAAAATTGTTTGAGTTGAACCCTGATGAAGGTGGCTACCATGTCTTGCTTGCAAACATTTATGCTTCTACTTCAAAATGGAGTAAGGTAGCCGAAGTAAGAAAAACAATGGAGAAGAAAGGGCTTAAGAAAACTCCTGGTTGTAGCGTGGTGGAATTGAGAAATGAAGTTCATTCCTTCTATTCAGGGAGCACAACTCATCCACAATCCAAGAGAATTTATGCCTTTCTTGAAGAACTTGTGTATGAAATCAAGGCAGCAGGCTATGTGCCCGACACTAACTTGATTCTCGACGTAGAGGACGATGTGCAGGAGCAGCTTCTCAATAGCCATAGTGAGAAGCTCGCCATTGCTTTTGGTCTTTTAAATACTAGTCCCGGTACTACGATACATGTCCGAAAGAACCTACGAGTTTGTGGTGATTGTCACAATGCAACCAAGTATATCTCACTAGTGACTGGAAGAGAGATCATAGTAAGAGATATGCAAAGATTTCACCATTTCAAAAATGGAATTTGTTCTTGTGGGGATTATTGGTGA

Coding sequence (CDS)

ATGAGGTCGTCCTCTGTTCCACCCATCGCCATTGTCAAAGCTCACAATCAAACCCCATTGAAATCAAGCTCAATTACCATTCCATCATCTCCTCTTCCATTTCACACTCTTTCGGAACGAGCCCATATCCCCTCTCATGTCTACAAGCACCCAGCCGCTGTTCTTCTCGAGCTCTGCACTTCTATGAAAGAGCTCCACCAAATTATCCCTCTAGTCATAAAAAATGGCCTCTACAACGAACACCTTTTTCAAACCAAGCTCGTCAGCTTATTCTCCAAGTATGGCAGCATCAACGAGGCTGCTCGTGTTTTCGAGCCAATAGATGACAAACTTGACGCTCTTTACCACACGATGTTAAAAGGGTATGCGAAGAACTCGTCGTTGGAGACTGCACTTGCTTTTCTTTGTCGTATGAGGTACGATGATGTTAAGCCTGTTGTGTATAATTTTACTTATTTGTTGAAGGTTTGTGGCGATAACGCGGATTTAAAGAGGGGAAAGGAGATTCATGGGCAGCTAATTACGAATTCGTTTGCGGCTAATGTGTTTGCAATGACCGGCGTTGTGAATATGTACGCTAAGTGCAGGCAGATTGATGATGCGTACAAGATGTTTGACAGAATGCCCGAGAGAGATTTGGTTTCTTGGAATACGATTATAGCTGGTTTTTCTCAAAATGGGTTTGCTAAAAAGGCGTTGGAGTTGGTTTTAAGAATGCAGGATGAAGGCCAAAGGCCTGATTCGATTACCTTGGTTACTGTTTTGCCTGCTGCTGCTGATGTTGGATTGTTAATGGTGGGGAAGTCAATTCATGGATATGCCATTAGAGCTGGGTTTGCAAAGCTTGTTAACATTTCAACTGCTTTGGCTGATATGTACTCAAAGTGCGGGTCAGTGGAGACAGCTAGATTGATTTTTGATGGAATGGATCAAAAAACTGTTGTGTCATGGAATTCCATGATGGATGGATATGTTCAAAATGGTGAACCGGAGAAGGCTATTGCAGTTTTTGAGAAGATGTTGGAAGAAGGGATAGACCCAACCGGTGTAACCATTATGGAAGCTTTGCATGCCTGTGCTGATTTGGGTGATCTTGAGAGGGGGAAGTTTGTTCATAAGTTTGTGGATCAGTTAAATCTTGGTTCTGACATCTCTGTAATGAACTCATTGATTTCCATGTATTCCAAGTGTAAGAGAGTTGACATAGCTTCTGACATTTTCAACAACTTAAATGGAAGAACACATGTCTCATGGAATGCCATGATATTGGGTTATGCTCAGAATGGAAGAGTGAGTGAGGCTTTGAACTGTTTTTCTGAAATGAAATCTCTAGGTATGAAACCTGATTCATTCACAATGGTAAGTGTGATACCTGCTCTTGCAGAATTATCAGTTACTCGCCATGCAAAATGGATTCACGGGCTAATTATTAGATCTTGTTTGGACAAAAATATTTTTGTGACAACCGCTCTTGTGGACATGTATTCAAAATGTGGAGCGATTCATATGGCAAGGAAGCTTTTCGACATGATCAGTGACCGACATGTCATAACATGGAATGCGATGATAGATGGGTATGGAACACACGGTCTTGGAAGAGCTGCTCTAGATCTCTTTGATAAAATGAAAAAGGGAGCAGTTGAACCAAATGATATTACATATTTATCTGTCATCTCTGCTTGCAGTCACTCAGGTCTGGTGGACGAAGGACTTCGCCATTTCAAGAGCATGAAACAAGACTATGGATTAGAACCTTCAATGGATCACTATGGCGCTATGGTCGATCTTCTTGGTCGAGCTGGCAGGATCAAAGAAGCCTGGGATTTTATAGAAAACATGCCTATTAGTCCAGGGATTACTGTGTATGGTGCCATGTTGGGTGCTTGTAAAATTCACAAAAATATTGAAGTTGGAGAGAAAGCAGCTAAAAAATTGTTTGAGTTGAACCCTGATGAAGGTGGCTACCATGTCTTGCTTGCAAACATTTATGCTTCTACTTCAAAATGGAGTAAGGTAGCCGAAGTAAGAAAAACAATGGAGAAGAAAGGGCTTAAGAAAACTCCTGGTTGTAGCGTGGTGGAATTGAGAAATGAAGTTCATTCCTTCTATTCAGGGAGCACAACTCATCCACAATCCAAGAGAATTTATGCCTTTCTTGAAGAACTTGTGTATGAAATCAAGGCAGCAGGCTATGTGCCCGACACTAACTTGATTCTCGACGTAGAGGACGATGTGCAGGAGCAGCTTCTCAATAGCCATAGTGAGAAGCTCGCCATTGCTTTTGGTCTTTTAAATACTAGTCCCGGTACTACGATACATGTCCGAAAGAACCTACGAGTTTGTGGTGATTGTCACAATGCAACCAAGTATATCTCACTAGTGACTGGAAGAGAGATCATAGTAAGAGATATGCAAAGATTTCACCATTTCAAAAATGGAATTTGTTCTTGTGGGGATTATTGGTGA

Protein sequence

MRSSSVPPIAIVKAHNQTPLKSSSITIPSSPLPFHTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW
BLAST of CsaV3_5G029410 vs. NCBI nr
Match: XP_004147126.2 (PREDICTED: pentatricopeptide repeat-containing protein At1g11290 isoform X1 [Cucumis sativus] >KGN51595.1 hypothetical protein Csa_5G583260 [Cucumis sativus])

HSP 1 Score: 1664.8 bits (4310), Expect = 0.0e+00
Identity = 821/821 (100.00%), Postives = 821/821 (100.00%), Query Frame = 0

Query: 1   MRSSSVPPIAIVKAHNQTPLKSSSITIPSSPLPFHTLSERAHIPSHVYKHPAAVLLELCT 60
           MRSSSVPPIAIVKAHNQTPLKSSSITIPSSPLPFHTLSERAHIPSHVYKHPAAVLLELCT
Sbjct: 1   MRSSSVPPIAIVKAHNQTPLKSSSITIPSSPLPFHTLSERAHIPSHVYKHPAAVLLELCT 60

Query: 61  SMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLK 120
           SMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLK
Sbjct: 61  SMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLK 120

Query: 121 GYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAA 180
           GYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAA
Sbjct: 121 GYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAA 180

Query: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240
           NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ
Sbjct: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240

Query: 241 DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE 300
           DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE
Sbjct: 241 DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE 300

Query: 301 TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACA 360
           TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACA
Sbjct: 301 TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACA 360

Query: 361 DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNA 420
           DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNA
Sbjct: 361 DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNA 420

Query: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC 480
           MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC
Sbjct: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC 480

Query: 481 LDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFD 540
           LDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFD
Sbjct: 481 LDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFD 540

Query: 541 KMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRA 600
           KMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRA
Sbjct: 541 KMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRA 600

Query: 601 GRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLA 660
           GRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLA
Sbjct: 601 GRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLA 660

Query: 661 NIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLE 720
           NIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLE
Sbjct: 661 NIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLE 720

Query: 721 ELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRV 780
           ELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRV
Sbjct: 721 ELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRV 780

Query: 781 CGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 822
           CGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW
Sbjct: 781 CGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821

BLAST of CsaV3_5G029410 vs. NCBI nr
Match: XP_008445930.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g11290, chloroplastic [Cucumis melo])

HSP 1 Score: 1630.5 bits (4221), Expect = 0.0e+00
Identity = 800/821 (97.44%), Postives = 808/821 (98.42%), Query Frame = 0

Query: 1   MRSSSVPPIAIVKAHNQTPLKSSSITIPSSPLPFHTLSERAHIPSHVYKHPAAVLLELCT 60
           MRSSSVPPIAIVKAHN+TPLKSSSITIPSSPLPFHTLSER HIPSHVYKHPAAVLLELCT
Sbjct: 1   MRSSSVPPIAIVKAHNRTPLKSSSITIPSSPLPFHTLSERTHIPSHVYKHPAAVLLELCT 60

Query: 61  SMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLK 120
           SMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLK
Sbjct: 61  SMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLK 120

Query: 121 GYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAA 180
           GYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSF A
Sbjct: 121 GYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFGA 180

Query: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240
           NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ
Sbjct: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240

Query: 241 DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE 300
           DEGQRPDSITLVTVLPAAADVG LMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE
Sbjct: 241 DEGQRPDSITLVTVLPAAADVGSLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE 300

Query: 301 TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACA 360
           TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPT VTIMEALHACA
Sbjct: 301 TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTSVTIMEALHACA 360

Query: 361 DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNA 420
           DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKR DIASDIFNNLNGRTHVSWNA
Sbjct: 361 DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRADIASDIFNNLNGRTHVSWNA 420

Query: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC 480
           MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVI ALA+LS+TRHAKWIHGL+IRSC
Sbjct: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVILALADLSITRHAKWIHGLVIRSC 480

Query: 481 LDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFD 540
           LDKNIFVTTALVDMY+KCGAIHMARKLFDMI+DRHVITWNAMIDGYGTHGLGRAALDLFD
Sbjct: 481 LDKNIFVTTALVDMYAKCGAIHMARKLFDMINDRHVITWNAMIDGYGTHGLGRAALDLFD 540

Query: 541 KMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRA 600
           KMKKG VEPNDITYLSVISACSHSGLVDEGL HFKSMKQDYGLEPSMDHYG MVDLLGRA
Sbjct: 541 KMKKGTVEPNDITYLSVISACSHSGLVDEGLHHFKSMKQDYGLEPSMDHYGTMVDLLGRA 600

Query: 601 GRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLA 660
           GRIKEAWDFIENMPISPGITVYGAMLGACKIHKN+E GEKAA KLFELNPDEGGYHVLLA
Sbjct: 601 GRIKEAWDFIENMPISPGITVYGAMLGACKIHKNVEFGEKAANKLFELNPDEGGYHVLLA 660

Query: 661 NIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLE 720
           NIYASTSKWSKVAEVRKTMEKKGLKKTPGCS+VELRNEVHSFYSGSTTHPQSKRIYAFLE
Sbjct: 661 NIYASTSKWSKVAEVRKTMEKKGLKKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLE 720

Query: 721 ELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRV 780
           EL YEIKAAGYVPDTN ILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRV
Sbjct: 721 ELGYEIKAAGYVPDTNSILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRV 780

Query: 781 CGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 822
           CGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW
Sbjct: 781 CGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821

BLAST of CsaV3_5G029410 vs. NCBI nr
Match: XP_023541274.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1506.5 bits (3899), Expect = 0.0e+00
Identity = 731/818 (89.36%), Postives = 772/818 (94.38%), Query Frame = 0

Query: 4   SSVPPIAIVKAHNQTPLKSSSITIPSSPLPFHTLSERAHIPSHVYKHPAAVLLELCTSMK 63
           SS+P IAI KAHN+TPLK SSI+I SSPLP HTLSER HIPSHVY+HPAAVLLELCTSMK
Sbjct: 9   SSLPSIAIAKAHNRTPLKPSSISISSSPLPSHTLSERTHIPSHVYRHPAAVLLELCTSMK 68

Query: 64  ELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYA 123
           ELHQI+PLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPI++K+D LYHTMLKGYA
Sbjct: 69  ELHQILPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIEEKIDVLYHTMLKGYA 128

Query: 124 KNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVF 183
           KNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRG+EIHG LI NSF ANVF
Sbjct: 129 KNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGREIHGNLIKNSFGANVF 188

Query: 184 AMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEG 243
           AMTGVVNMYAKCRQIDDAYKMFDRMP RDLVSWNTII GFSQNGFA KALELVL MQDEG
Sbjct: 189 AMTGVVNMYAKCRQIDDAYKMFDRMPVRDLVSWNTIITGFSQNGFANKALELVLSMQDEG 248

Query: 244 QRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETAR 303
           QRPDSITLVTVLPAAAD+G LMVGKSIHGYAIRAGF+KLVNISTAL DMYSKCGSV+TAR
Sbjct: 249 QRPDSITLVTVLPAAADIGSLMVGKSIHGYAIRAGFSKLVNISTALVDMYSKCGSVDTAR 308

Query: 304 LIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG 363
           LIFDGM+QKTVVSWNSMM GYVQ+GEPE AIA+FEKML+EGI+PT VTIMEALHACADLG
Sbjct: 309 LIFDGMEQKTVVSWNSMMAGYVQSGEPEMAIAIFEKMLDEGIEPTNVTIMEALHACADLG 368

Query: 364 DLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMIL 423
           D E GKFVHKFVD+LNLGSD+S+MNSLISMYSKC RVDIASDIF NL+ +T VSWNAMIL
Sbjct: 369 DFEMGKFVHKFVDKLNLGSDVSIMNSLISMYSKCNRVDIASDIFKNLHRKTLVSWNAMIL 428

Query: 424 GYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDK 483
           GY QNGRVSEALNCF EM+SLG+K DSFT+VSVIPALAELSVTR AKWIHGL+IRSCLDK
Sbjct: 429 GYTQNGRVSEALNCFCEMQSLGIKSDSFTVVSVIPALAELSVTRQAKWIHGLVIRSCLDK 488

Query: 484 NIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMK 543
           NIFVTTALVDMY+KCGAIHMARKLFDMI DRHVITWNAMIDGYGTHGLGRAA++LFD+M+
Sbjct: 489 NIFVTTALVDMYAKCGAIHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAVNLFDEMR 548

Query: 544 KGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRI 603
           +G VEPNDIT+L VISACSHSGLVDEGLR+F+SMKQDYGLEPSMDHYG MVDLLGRAGRI
Sbjct: 549 RGTVEPNDITFLCVISACSHSGLVDEGLRYFESMKQDYGLEPSMDHYGVMVDLLGRAGRI 608

Query: 604 KEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIY 663
           KEAWDFIENMP+SPGITVYGAMLGACKIHKN+E GEK+A KLFE+NPDEGGYHVLLANIY
Sbjct: 609 KEAWDFIENMPVSPGITVYGAMLGACKIHKNVEFGEKSANKLFEMNPDEGGYHVLLANIY 668

Query: 664 ASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELV 723
           AS SKW KVAEVR+TMEKKGLKKTPGCS VELRNEVHSFYSGSTTHPQSKRIYAFLEEL 
Sbjct: 669 ASASKWGKVAEVRRTMEKKGLKKTPGCSFVELRNEVHSFYSGSTTHPQSKRIYAFLEELG 728

Query: 724 YEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGD 783
            EIKAAGYVPDT+ I DVEDDVQEQLLNSHSEKLAIAF LLNTSP TTIHVRKNLRVCGD
Sbjct: 729 DEIKAAGYVPDTSSIHDVEDDVQEQLLNSHSEKLAIAFSLLNTSPNTTIHVRKNLRVCGD 788

Query: 784 CHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 822
           CHNATKYISLVTGREIIVRDM RFHHFKNG CSCGDYW
Sbjct: 789 CHNATKYISLVTGREIIVRDMHRFHHFKNGSCSCGDYW 826

BLAST of CsaV3_5G029410 vs. NCBI nr
Match: XP_022945178.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1503.8 bits (3892), Expect = 0.0e+00
Identity = 731/818 (89.36%), Postives = 770/818 (94.13%), Query Frame = 0

Query: 4   SSVPPIAIVKAHNQTPLKSSSITIPSSPLPFHTLSERAHIPSHVYKHPAAVLLELCTSMK 63
           SS+P IAI KAHNQTPLK SSI+I SSPLP HTLSER HIPSHVY+HPAAVLLELCTSMK
Sbjct: 9   SSLPSIAIAKAHNQTPLKPSSISISSSPLPSHTLSERTHIPSHVYRHPAAVLLELCTSMK 68

Query: 64  ELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYA 123
           ELHQI+PLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPI++K+D LYHTMLKGYA
Sbjct: 69  ELHQILPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIEEKIDVLYHTMLKGYA 128

Query: 124 KNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVF 183
           KNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRG+EIHG LI NSF ANVF
Sbjct: 129 KNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGREIHGNLIKNSFGANVF 188

Query: 184 AMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEG 243
           AMTGVVNMYAKCRQIDDAYKMFDRMP RDLVSWNTII GFSQNGFA KALELVL MQDEG
Sbjct: 189 AMTGVVNMYAKCRQIDDAYKMFDRMPVRDLVSWNTIITGFSQNGFANKALELVLSMQDEG 248

Query: 244 QRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETAR 303
           QRPDSITLVTVLPAAAD+G LMVGKSIHGYAIRAGF+KLVNISTAL DMYSKCGSV+TAR
Sbjct: 249 QRPDSITLVTVLPAAADIGSLMVGKSIHGYAIRAGFSKLVNISTALVDMYSKCGSVDTAR 308

Query: 304 LIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG 363
           LIFDGM+QKTVVSWNSMM GYVQ+GEPE AIA+FEKMLEEGI+PT VTIMEALHACADLG
Sbjct: 309 LIFDGMEQKTVVSWNSMMAGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLG 368

Query: 364 DLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMIL 423
           D E GKFVHKFVD+LNLGSD+S+MNSLISMYSKC RVDIASDIF NL+ +T VSWNAMIL
Sbjct: 369 DFEMGKFVHKFVDKLNLGSDVSIMNSLISMYSKCNRVDIASDIFMNLHRKTLVSWNAMIL 428

Query: 424 GYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDK 483
           GY QNGRVSEALNCF EM+SLG+K DSFTMVSVIPALAELSVTR AKWIHGL+IRSC DK
Sbjct: 429 GYTQNGRVSEALNCFCEMQSLGIKSDSFTMVSVIPALAELSVTRQAKWIHGLVIRSCFDK 488

Query: 484 NIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMK 543
           NIFVTTALVDMY+KCGAIHMARKLFDMI DRHVITWNAMIDGYGTHGLGRAA++LFD+M+
Sbjct: 489 NIFVTTALVDMYAKCGAIHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAVNLFDEMR 548

Query: 544 KGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRI 603
           +G VEPNDIT+L VISACSHSGLVDEGLR+F+SMKQDYGLEPSMDHYGAMVDLLGRAGRI
Sbjct: 549 RGTVEPNDITFLCVISACSHSGLVDEGLRYFESMKQDYGLEPSMDHYGAMVDLLGRAGRI 608

Query: 604 KEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIY 663
           KEAWDFI NMP+SPGITVYGAMLGACKIHKN+E GEK+A KLFE+NPDEGGYHVLLANIY
Sbjct: 609 KEAWDFIGNMPVSPGITVYGAMLGACKIHKNVEFGEKSANKLFEMNPDEGGYHVLLANIY 668

Query: 664 ASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELV 723
           AS SKW KVAEVR+TMEKKGLKKTPGCS VE+RNEVHSFYSGSTTHPQSKRIYAFLEEL 
Sbjct: 669 ASASKWGKVAEVRRTMEKKGLKKTPGCSFVEIRNEVHSFYSGSTTHPQSKRIYAFLEELG 728

Query: 724 YEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGD 783
            EIKAAGYVPDT+ I DVED VQEQLLNSHSEKLAIAF LLNTSP TTIHVRKNLRVCGD
Sbjct: 729 DEIKAAGYVPDTSSIHDVEDAVQEQLLNSHSEKLAIAFSLLNTSPNTTIHVRKNLRVCGD 788

Query: 784 CHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 822
           CHNATKYISLVTGREIIVRDM RFHHFKNG CSCGDYW
Sbjct: 789 CHNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 826

BLAST of CsaV3_5G029410 vs. NCBI nr
Match: XP_022967032.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 1496.1 bits (3872), Expect = 0.0e+00
Identity = 732/818 (89.49%), Postives = 765/818 (93.52%), Query Frame = 0

Query: 4   SSVPPIAIVKAHNQTPLKSSSITIPSSPLPFHTLSERAHIPSHVYKHPAAVLLELCTSMK 63
           SS+P IAI KA NQTPLK SSI+I SSPLP HTLSER HIPSHVY+HPAAVLLELCTSMK
Sbjct: 9   SSLPSIAIAKAQNQTPLKPSSISISSSPLPSHTLSERTHIPSHVYRHPAAVLLELCTSMK 68

Query: 64  ELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYA 123
           EL QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPI+DK+D LYHTMLKGYA
Sbjct: 69  ELCQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIEDKIDVLYHTMLKGYA 128

Query: 124 KNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVF 183
           KNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRG+EIHG LI NSF ANVF
Sbjct: 129 KNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGREIHGNLIKNSFGANVF 188

Query: 184 AMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEG 243
           AMTGVVNMYAKCRQI DA+KMFDRMP RDLVSWNTII GFSQNGFA KALELVL MQDEG
Sbjct: 189 AMTGVVNMYAKCRQIHDAHKMFDRMPVRDLVSWNTIITGFSQNGFANKALELVLSMQDEG 248

Query: 244 QRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETAR 303
           QRPDSITLVTVLPAAAD+G LMVGKSIHGYAIRAGF+KLVNISTAL DMYSKCGSV+TAR
Sbjct: 249 QRPDSITLVTVLPAAADIGSLMVGKSIHGYAIRAGFSKLVNISTALVDMYSKCGSVDTAR 308

Query: 304 LIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG 363
           LIFDGM+QKTVVSWNSMM GYVQ+GEPE AIA+FEKMLEEGI+PT VTIMEALHACADLG
Sbjct: 309 LIFDGMEQKTVVSWNSMMAGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLG 368

Query: 364 DLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMIL 423
           D E GKFVHKFVD+LNLGSDIS+MNSLISMYSKC RVDIASDIF NL+ +T VSWNAMIL
Sbjct: 369 DFEMGKFVHKFVDKLNLGSDISIMNSLISMYSKCNRVDIASDIFKNLHRKTLVSWNAMIL 428

Query: 424 GYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDK 483
           GY QNGRVSEALNCF EM+SLG+K DSFTMVSVIPALAELSVTR AKWIHGLIIRSCLDK
Sbjct: 429 GYTQNGRVSEALNCFCEMQSLGIKSDSFTMVSVIPALAELSVTRQAKWIHGLIIRSCLDK 488

Query: 484 NIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMK 543
           NIFV TALVDMY+KCGAIHMARKLFDMI DRHVITWNAMIDGYGTHGLGRA  +LFD+M+
Sbjct: 489 NIFVATALVDMYAKCGAIHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAVANLFDEMR 548

Query: 544 KGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRI 603
           +G VEPNDIT+L VISACSHSGLVDEGLR+F+SMKQDYGLEPSMDHYGAMVDLLGRAGRI
Sbjct: 549 RGTVEPNDITFLCVISACSHSGLVDEGLRYFESMKQDYGLEPSMDHYGAMVDLLGRAGRI 608

Query: 604 KEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIY 663
           KEAWDFI NMP+SPGITVYGAMLGACKIHKN+E GEK+A KLFE+NPDEGGYHVLLANIY
Sbjct: 609 KEAWDFIGNMPVSPGITVYGAMLGACKIHKNVEFGEKSANKLFEMNPDEGGYHVLLANIY 668

Query: 664 ASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELV 723
           AS SKW KVAEVR+TMEKKGLKKTPGCS VELRNEVHSFYSGSTTHPQSKRIYAFLE L 
Sbjct: 669 ASASKWGKVAEVRRTMEKKGLKKTPGCSFVELRNEVHSFYSGSTTHPQSKRIYAFLEVLG 728

Query: 724 YEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGD 783
            EIKAAGYVPDTN I DVEDDVQEQLLNSHSEKLAIAF LLNTSP TTIHVRKNLRVCGD
Sbjct: 729 DEIKAAGYVPDTNSIHDVEDDVQEQLLNSHSEKLAIAFSLLNTSPNTTIHVRKNLRVCGD 788

Query: 784 CHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 822
           CHNATKYISLVTGREIIVRDM RFHHFKNG CSCGDYW
Sbjct: 789 CHNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 826

BLAST of CsaV3_5G029410 vs. TAIR10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 1193.7 bits (3087), Expect = 0.0e+00
Identity = 557/800 (69.62%), Postives = 681/800 (85.12%), Query Frame = 0

Query: 26  TIPSSPLP----FHTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEH 85
           T+P  P P     H LSER +IP++VY+HPAA+LLE C+S+KEL QI+PLV KNGLY EH
Sbjct: 10  TVPQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEH 69

Query: 86  LFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYD 145
            FQTKLVSLF +YGS++EAARVFEPID KL+ LYHTMLKG+AK S L+ AL F  RMRYD
Sbjct: 70  FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129

Query: 146 DVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDA 205
           DV+PVVYNFTYLLKVCGD A+L+ GKEIHG L+ + F+ ++FAMTG+ NMYAKCRQ+++A
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189

Query: 206 YKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADV 265
            K+FDRMPERDLVSWNTI+AG+SQNG A+ ALE+V  M +E  +P  IT+V+VLPA + +
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249

Query: 266 GLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMM 325
            L+ VGK IHGYA+R+GF  LVNISTAL DMY+KCGS+ETAR +FDGM ++ VVSWNSM+
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMI 309

Query: 326 DGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLG 385
           D YVQN  P++A+ +F+KML+EG+ PT V++M ALHACADLGDLERG+F+HK   +L L 
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLD 369

Query: 386 SDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEM 445
            ++SV+NSLISMY KCK VD A+ +F  L  RT VSWNAMILG+AQNGR  +ALN FS+M
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429

Query: 446 KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAI 505
           +S  +KPD+FT VSVI A+AELS+T HAKWIHG+++RSCLDKN+FVTTALVDMY+KCGAI
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 489

Query: 506 HMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISAC 565
            +AR +FDM+S+RHV TWNAMIDGYGTHG G+AAL+LF++M+KG ++PN +T+LSVISAC
Sbjct: 490 MIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC 549

Query: 566 SHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITV 625
           SHSGLV+ GL+ F  MK++Y +E SMDHYGAMVDLLGRAGR+ EAWDFI  MP+ P + V
Sbjct: 550 SHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 609

Query: 626 YGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEK 685
           YGAMLGAC+IHKN+   EKAA++LFELNPD+GGYHVLLANIY + S W KV +VR +M +
Sbjct: 610 YGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLR 669

Query: 686 KGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLILDV 745
           +GL+KTPGCS+VE++NEVHSF+SGST HP SK+IYAFLE+L+  IK AGYVPDTNL+L V
Sbjct: 670 QGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGV 729

Query: 746 EDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIV 805
           E+DV+EQLL++HSEKLAI+FGLLNT+ GTTIHVRKNLRVC DCHNATKYISLVTGREI+V
Sbjct: 730 ENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVV 789

Query: 806 RDMQRFHHFKNGICSCGDYW 822
           RDMQRFHHFKNG CSCGDYW
Sbjct: 790 RDMQRFHHFKNGACSCGDYW 809

BLAST of CsaV3_5G029410 vs. TAIR10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 608.6 bits (1568), Expect = 5.7e-174
Identity = 316/754 (41.91%), Postives = 461/754 (61.14%), Query Frame = 0

Query: 87  LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETAL-AFLCRMRYDDVKP 146
           LV+L+ K G      +VF+ I ++    +++++         E AL AF C M  ++V+P
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRC-MLDENVEP 198

Query: 147 VVYNFTYLLKVCGD---NADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAY 206
             +    ++  C +      L  GK++H   +      N F +  +V MY K  ++  + 
Sbjct: 199 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSK 258

Query: 207 KMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 266
            +      RDLV+WNT+++   QN    +ALE +  M  EG  PD  T+ +VLPA + + 
Sbjct: 259 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 318

Query: 267 LLMVGKSIHGYAIRAG-FAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMM 326
           +L  GK +H YA++ G   +   + +AL DMY  C  V + R +FDGM  + +  WN+M+
Sbjct: 319 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 378

Query: 327 DGYVQNGEPEKAIAVFEKMLEE-GIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNL 386
            GY QN   ++A+ +F  M E  G+     T+   + AC   G   R + +H FV +  L
Sbjct: 379 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 438

Query: 387 GSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSE 446
             D  V N+L+ MYS+  ++DIA  IF  +  R  V+WN MI GY  +    +AL    +
Sbjct: 439 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 498

Query: 447 MKSL-----------GMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTT 506
           M++L            +KP+S T+++++P+ A LS     K IH   I++ L  ++ V +
Sbjct: 499 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 558

Query: 507 ALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEP 566
           ALVDMY+KCG + M+RK+FD I  ++VITWN +I  YG HG G+ A+DL   M    V+P
Sbjct: 559 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 618

Query: 567 NDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDF 626
           N++T++SV +ACSHSG+VDEGLR F  MK DYG+EPS DHY  +VDLLGRAGRIKEA+  
Sbjct: 619 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 678

Query: 627 IENMPIS-PGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSK 686
           +  MP        + ++LGA +IH N+E+GE AA+ L +L P+   ++VLLANIY+S   
Sbjct: 679 MNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGL 738

Query: 687 WSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKA 746
           W K  EVR+ M+++G++K PGCS +E  +EVH F +G ++HPQS+++  +LE L   ++ 
Sbjct: 739 WDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 798

Query: 747 AGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNA 806
            GYVPDT+ +L +VE+D +E LL  HSEKLAIAFG+LNTSPGT I V KNLRVC DCH A
Sbjct: 799 EGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLA 858

Query: 807 TKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 822
           TK+IS +  REII+RD++RFH FKNG CSCGDYW
Sbjct: 859 TKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890

BLAST of CsaV3_5G029410 vs. TAIR10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 597.0 bits (1538), Expect = 1.7e-170
Identity = 296/765 (38.69%), Postives = 463/765 (60.52%), Query Frame = 0

Query: 60  TSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTML 119
           TS+  L Q    +I +G  N+    TKL    S  G+I  A  +F  +      L++ ++
Sbjct: 31  TSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLM 90

Query: 120 KGYAKNSSLETALAFLCRMRYD-DVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSF 179
           +G++ N S  ++L+    +R   D+KP    + + +       D + G+ IHGQ + +  
Sbjct: 91  RGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGC 150

Query: 180 AANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLR 239
            + +   + +V MY K  +++DA K+FDRMPE+D + WNT+I+G+ +N    +++++   
Sbjct: 151 DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRD 210

Query: 240 MQDEG-QRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCG 299
           + +E   R D+ TL+ +LPA A++  L +G  IH  A + G      + T    +YSKCG
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270

Query: 300 SVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALH 359
            ++    +F    +  +V++N+M+ GY  NGE E ++++F++++  G      T++  + 
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330

Query: 360 ACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVS 419
                G L     +H +  + N  S  SV  +L ++YSK   ++ A  +F+    ++  S
Sbjct: 331 VS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 390

Query: 420 WNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLII 479
           WNAMI GY QNG   +A++ F EM+     P+  T+  ++ A A+L      KW+H L+ 
Sbjct: 391 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 450

Query: 480 RSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALD 539
            +  + +I+V+TAL+ MY+KCG+I  AR+LFD+++ ++ +TWN MI GYG HG G+ AL+
Sbjct: 451 STDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALN 510

Query: 540 LFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLL 599
           +F +M    + P  +T+L V+ ACSH+GLV EG   F SM   YG EPS+ HY  MVD+L
Sbjct: 511 IFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDIL 570

Query: 600 GRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHV 659
           GRAG ++ A  FIE M I PG +V+  +LGAC+IHK+  +    ++KLFEL+PD  GYHV
Sbjct: 571 GRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHV 630

Query: 660 LLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYA 719
           LL+NI+++   + + A VR+T +K+ L K PG +++E+    H F SG  +HPQ K IY 
Sbjct: 631 LLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYE 690

Query: 720 FLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRK 779
            LE+L  +++ AGY P+T L L DVE++ +E ++  HSE+LAIAFGL+ T PGT I + K
Sbjct: 691 KLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIK 750

Query: 780 NLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 822
           NLRVC DCH  TK IS +T R I+VRD  RFHHFK+G+CSCGDYW
Sbjct: 751 NLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792

BLAST of CsaV3_5G029410 vs. TAIR10
Match: AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 589.0 bits (1517), Expect = 4.6e-168
Identity = 306/774 (39.53%), Postives = 468/774 (60.47%), Query Frame = 0

Query: 55  LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL 114
           L   CT+++    +   ++ +          KLV+L+   G++  A   F+ I ++    
Sbjct: 60  LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119

Query: 115 YHTMLKGYAK-NSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQL 174
           ++ M+ GY +  +S E    F   M    + P    F  +LK C    D   G +IH   
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLA 179

Query: 175 ITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKAL 234
           +   F  +V+    ++++Y++ + + +A  +FD MP RD+ SWN +I+G+ Q+G AK+AL
Sbjct: 180 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 239

Query: 235 ELVLRMQDEGQRP-DSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADM 294
            L       G R  DS+T+V++L A  + G    G +IH Y+I+ G    + +S  L D+
Sbjct: 240 TL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 299

Query: 295 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 354
           Y++ G +   + +FD M  + ++SWNS++  Y  N +P +AI++F++M    I P  +T+
Sbjct: 300 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 359

Query: 355 MEALHACADLGDLERGKFVHKFVDQLNLG---SDISVMNSLISMYSKCKRVDIASDIFNN 414
           +      + LGD+   + V  F   L  G    DI++ N+++ MY+K   VD A  +FN 
Sbjct: 360 ISLASILSQLGDIRACRSVQGFT--LRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 419

Query: 415 LNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG-MKPDSFTMVSVIPALAELSVTRH 474
           L     +SWN +I GYAQNG  SEA+  ++ M+  G +  +  T VSV+PA ++    R 
Sbjct: 420 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 479

Query: 475 AKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGT 534
              +HG ++++ L  ++FV T+L DMY KCG +  A  LF  I   + + WN +I  +G 
Sbjct: 480 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGF 539

Query: 535 HGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMD 594
           HG G  A+ LF +M    V+P+ IT+++++SACSHSGLVDEG   F+ M+ DYG+ PS+ 
Sbjct: 540 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 599

Query: 595 HYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFEL 654
           HYG MVD+ GRAG+++ A  FI++M + P  +++GA+L AC++H N+++G+ A++ LFE+
Sbjct: 600 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 659

Query: 655 NPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTT 714
            P+  GYHVLL+N+YAS  KW  V E+R     KGL+KTPG S +E+ N+V  FY+G+ T
Sbjct: 660 EPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQT 719

Query: 715 HPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTS 774
           HP  + +Y  L  L  ++K  GYVPD   +L DVEDD +E +L SHSE+LAIAF L+ T 
Sbjct: 720 HPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATP 779

Query: 775 PGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 822
             TTI + KNLRVCGDCH+ TK+IS +T REIIVRD  RFHHFKNG+CSCGDYW
Sbjct: 780 AKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823

BLAST of CsaV3_5G029410 vs. TAIR10
Match: AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 578.6 bits (1490), Expect = 6.3e-165
Identity = 283/734 (38.56%), Postives = 444/734 (60.49%), Query Frame = 0

Query: 88  VSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRY-DDVKPV 147
           +++F ++G++ +A  VF  + ++    ++ ++ GYAK    + A+    RM +   VKP 
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPD 195

Query: 148 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 207
           VY F  +L+ CG   DL RGKE+H  ++   +  ++  +  ++ MY KC  +  A  +FD
Sbjct: 196 VYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD 255

Query: 208 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 267
           RMP RD++SWN +I+G+ +NG   + LEL   M+     PD +TL +V+ A   +G   +
Sbjct: 256 RMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315

Query: 268 GKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 327
           G+ IH Y I  GFA  +++  +L  MY   GS   A  +F  M++K +VSW +M+ GY  
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEY 375

Query: 328 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISV 387
           N  P+KAI  +  M ++ + P  +T+   L ACA LGDL+ G  +HK   +  L S + V
Sbjct: 376 NFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIV 435

Query: 388 MNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGM 447
            N+LI+MYSKCK +D A DIF+N+  +  +SW ++I G   N R  EAL    +MK + +
Sbjct: 436 ANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK-MTL 495

Query: 448 KPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARK 507
           +P++ T+ + + A A +      K IH  ++R+ +  + F+  AL+DMY +CG ++ A  
Sbjct: 496 QPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWS 555

Query: 508 LFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGL 567
            F+    + V +WN ++ GY   G G   ++LFD+M K  V P++IT++S++  CS S +
Sbjct: 556 QFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQM 615

Query: 568 VDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAML 627
           V +GL +F  M +DYG+ P++ HY  +VDLLGRAG ++EA  FI+ MP++P   V+GA+L
Sbjct: 616 VRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL 675

Query: 628 GACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKK 687
            AC+IH  I++GE +A+ +FEL+    GY++LL N+YA   KW +VA+VR+ M++ GL  
Sbjct: 676 NACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTV 735

Query: 688 TPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVP-DTNLILDVEDDV 747
             GCS VE++ +VH+F S    HPQ+K I   LE    ++   G      +  +D  +  
Sbjct: 736 DAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEIS 795

Query: 748 QEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQ 807
           ++++   HSE+ AIAFGL+NT PG  I V KNL +C +CH+  K+IS    REI VRD +
Sbjct: 796 RDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAE 855

Query: 808 RFHHFKNGICSCGD 820
            FHHFK+G CSCGD
Sbjct: 856 HFHHFKDGECSCGD 866

BLAST of CsaV3_5G029410 vs. Swiss-Prot
Match: sp|Q3E6Q1|PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 1193.7 bits (3087), Expect = 0.0e+00
Identity = 557/800 (69.62%), Postives = 681/800 (85.12%), Query Frame = 0

Query: 26  TIPSSPLP----FHTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEH 85
           T+P  P P     H LSER +IP++VY+HPAA+LLE C+S+KEL QI+PLV KNGLY EH
Sbjct: 10  TVPQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEH 69

Query: 86  LFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYD 145
            FQTKLVSLF +YGS++EAARVFEPID KL+ LYHTMLKG+AK S L+ AL F  RMRYD
Sbjct: 70  FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129

Query: 146 DVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDA 205
           DV+PVVYNFTYLLKVCGD A+L+ GKEIHG L+ + F+ ++FAMTG+ NMYAKCRQ+++A
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189

Query: 206 YKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADV 265
            K+FDRMPERDLVSWNTI+AG+SQNG A+ ALE+V  M +E  +P  IT+V+VLPA + +
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249

Query: 266 GLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMM 325
            L+ VGK IHGYA+R+GF  LVNISTAL DMY+KCGS+ETAR +FDGM ++ VVSWNSM+
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMI 309

Query: 326 DGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLG 385
           D YVQN  P++A+ +F+KML+EG+ PT V++M ALHACADLGDLERG+F+HK   +L L 
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLD 369

Query: 386 SDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEM 445
            ++SV+NSLISMY KCK VD A+ +F  L  RT VSWNAMILG+AQNGR  +ALN FS+M
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429

Query: 446 KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAI 505
           +S  +KPD+FT VSVI A+AELS+T HAKWIHG+++RSCLDKN+FVTTALVDMY+KCGAI
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 489

Query: 506 HMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISAC 565
            +AR +FDM+S+RHV TWNAMIDGYGTHG G+AAL+LF++M+KG ++PN +T+LSVISAC
Sbjct: 490 MIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC 549

Query: 566 SHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITV 625
           SHSGLV+ GL+ F  MK++Y +E SMDHYGAMVDLLGRAGR+ EAWDFI  MP+ P + V
Sbjct: 550 SHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 609

Query: 626 YGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEK 685
           YGAMLGAC+IHKN+   EKAA++LFELNPD+GGYHVLLANIY + S W KV +VR +M +
Sbjct: 610 YGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLR 669

Query: 686 KGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLILDV 745
           +GL+KTPGCS+VE++NEVHSF+SGST HP SK+IYAFLE+L+  IK AGYVPDTNL+L V
Sbjct: 670 QGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGV 729

Query: 746 EDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIV 805
           E+DV+EQLL++HSEKLAI+FGLLNT+ GTTIHVRKNLRVC DCHNATKYISLVTGREI+V
Sbjct: 730 ENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVV 789

Query: 806 RDMQRFHHFKNGICSCGDYW 822
           RDMQRFHHFKNG CSCGDYW
Sbjct: 790 RDMQRFHHFKNGACSCGDYW 809

BLAST of CsaV3_5G029410 vs. Swiss-Prot
Match: sp|Q7Y211|PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 608.6 bits (1568), Expect = 1.0e-172
Identity = 316/754 (41.91%), Postives = 461/754 (61.14%), Query Frame = 0

Query: 87  LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETAL-AFLCRMRYDDVKP 146
           LV+L+ K G      +VF+ I ++    +++++         E AL AF C M  ++V+P
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRC-MLDENVEP 198

Query: 147 VVYNFTYLLKVCGD---NADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAY 206
             +    ++  C +      L  GK++H   +      N F +  +V MY K  ++  + 
Sbjct: 199 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSK 258

Query: 207 KMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 266
            +      RDLV+WNT+++   QN    +ALE +  M  EG  PD  T+ +VLPA + + 
Sbjct: 259 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 318

Query: 267 LLMVGKSIHGYAIRAG-FAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMM 326
           +L  GK +H YA++ G   +   + +AL DMY  C  V + R +FDGM  + +  WN+M+
Sbjct: 319 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 378

Query: 327 DGYVQNGEPEKAIAVFEKMLEE-GIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNL 386
            GY QN   ++A+ +F  M E  G+     T+   + AC   G   R + +H FV +  L
Sbjct: 379 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 438

Query: 387 GSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSE 446
             D  V N+L+ MYS+  ++DIA  IF  +  R  V+WN MI GY  +    +AL    +
Sbjct: 439 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 498

Query: 447 MKSL-----------GMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTT 506
           M++L            +KP+S T+++++P+ A LS     K IH   I++ L  ++ V +
Sbjct: 499 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 558

Query: 507 ALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEP 566
           ALVDMY+KCG + M+RK+FD I  ++VITWN +I  YG HG G+ A+DL   M    V+P
Sbjct: 559 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 618

Query: 567 NDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDF 626
           N++T++SV +ACSHSG+VDEGLR F  MK DYG+EPS DHY  +VDLLGRAGRIKEA+  
Sbjct: 619 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 678

Query: 627 IENMPIS-PGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSK 686
           +  MP        + ++LGA +IH N+E+GE AA+ L +L P+   ++VLLANIY+S   
Sbjct: 679 MNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGL 738

Query: 687 WSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKA 746
           W K  EVR+ M+++G++K PGCS +E  +EVH F +G ++HPQS+++  +LE L   ++ 
Sbjct: 739 WDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 798

Query: 747 AGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNA 806
            GYVPDT+ +L +VE+D +E LL  HSEKLAIAFG+LNTSPGT I V KNLRVC DCH A
Sbjct: 799 EGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLA 858

Query: 807 TKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 822
           TK+IS +  REII+RD++RFH FKNG CSCGDYW
Sbjct: 859 TKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890

BLAST of CsaV3_5G029410 vs. Swiss-Prot
Match: sp|Q9SUH6|PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 3.1e-169
Identity = 296/765 (38.69%), Postives = 463/765 (60.52%), Query Frame = 0

Query: 60  TSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTML 119
           TS+  L Q    +I +G  N+    TKL    S  G+I  A  +F  +      L++ ++
Sbjct: 31  TSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLM 90

Query: 120 KGYAKNSSLETALAFLCRMRYD-DVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSF 179
           +G++ N S  ++L+    +R   D+KP    + + +       D + G+ IHGQ + +  
Sbjct: 91  RGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGC 150

Query: 180 AANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLR 239
            + +   + +V MY K  +++DA K+FDRMPE+D + WNT+I+G+ +N    +++++   
Sbjct: 151 DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRD 210

Query: 240 MQDEG-QRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCG 299
           + +E   R D+ TL+ +LPA A++  L +G  IH  A + G      + T    +YSKCG
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270

Query: 300 SVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALH 359
            ++    +F    +  +V++N+M+ GY  NGE E ++++F++++  G      T++  + 
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330

Query: 360 ACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVS 419
                G L     +H +  + N  S  SV  +L ++YSK   ++ A  +F+    ++  S
Sbjct: 331 VS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 390

Query: 420 WNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLII 479
           WNAMI GY QNG   +A++ F EM+     P+  T+  ++ A A+L      KW+H L+ 
Sbjct: 391 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 450

Query: 480 RSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALD 539
            +  + +I+V+TAL+ MY+KCG+I  AR+LFD+++ ++ +TWN MI GYG HG G+ AL+
Sbjct: 451 STDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALN 510

Query: 540 LFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLL 599
           +F +M    + P  +T+L V+ ACSH+GLV EG   F SM   YG EPS+ HY  MVD+L
Sbjct: 511 IFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDIL 570

Query: 600 GRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHV 659
           GRAG ++ A  FIE M I PG +V+  +LGAC+IHK+  +    ++KLFEL+PD  GYHV
Sbjct: 571 GRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHV 630

Query: 660 LLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYA 719
           LL+NI+++   + + A VR+T +K+ L K PG +++E+    H F SG  +HPQ K IY 
Sbjct: 631 LLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYE 690

Query: 720 FLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRK 779
            LE+L  +++ AGY P+T L L DVE++ +E ++  HSE+LAIAFGL+ T PGT I + K
Sbjct: 691 KLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIK 750

Query: 780 NLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 822
           NLRVC DCH  TK IS +T R I+VRD  RFHHFK+G+CSCGDYW
Sbjct: 751 NLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792

BLAST of CsaV3_5G029410 vs. Swiss-Prot
Match: sp|O81767|PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 589.0 bits (1517), Expect = 8.4e-167
Identity = 306/774 (39.53%), Postives = 468/774 (60.47%), Query Frame = 0

Query: 55  LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL 114
           L   CT+++    +   ++ +          KLV+L+   G++  A   F+ I ++    
Sbjct: 60  LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119

Query: 115 YHTMLKGYAK-NSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQL 174
           ++ M+ GY +  +S E    F   M    + P    F  +LK C    D   G +IH   
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLA 179

Query: 175 ITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKAL 234
           +   F  +V+    ++++Y++ + + +A  +FD MP RD+ SWN +I+G+ Q+G AK+AL
Sbjct: 180 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 239

Query: 235 ELVLRMQDEGQRP-DSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADM 294
            L       G R  DS+T+V++L A  + G    G +IH Y+I+ G    + +S  L D+
Sbjct: 240 TL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 299

Query: 295 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 354
           Y++ G +   + +FD M  + ++SWNS++  Y  N +P +AI++F++M    I P  +T+
Sbjct: 300 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 359

Query: 355 MEALHACADLGDLERGKFVHKFVDQLNLG---SDISVMNSLISMYSKCKRVDIASDIFNN 414
           +      + LGD+   + V  F   L  G    DI++ N+++ MY+K   VD A  +FN 
Sbjct: 360 ISLASILSQLGDIRACRSVQGFT--LRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 419

Query: 415 LNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG-MKPDSFTMVSVIPALAELSVTRH 474
           L     +SWN +I GYAQNG  SEA+  ++ M+  G +  +  T VSV+PA ++    R 
Sbjct: 420 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 479

Query: 475 AKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGT 534
              +HG ++++ L  ++FV T+L DMY KCG +  A  LF  I   + + WN +I  +G 
Sbjct: 480 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGF 539

Query: 535 HGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMD 594
           HG G  A+ LF +M    V+P+ IT+++++SACSHSGLVDEG   F+ M+ DYG+ PS+ 
Sbjct: 540 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 599

Query: 595 HYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFEL 654
           HYG MVD+ GRAG+++ A  FI++M + P  +++GA+L AC++H N+++G+ A++ LFE+
Sbjct: 600 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 659

Query: 655 NPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTT 714
            P+  GYHVLL+N+YAS  KW  V E+R     KGL+KTPG S +E+ N+V  FY+G+ T
Sbjct: 660 EPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQT 719

Query: 715 HPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTS 774
           HP  + +Y  L  L  ++K  GYVPD   +L DVEDD +E +L SHSE+LAIAF L+ T 
Sbjct: 720 HPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATP 779

Query: 775 PGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 822
             TTI + KNLRVCGDCH+ TK+IS +T REIIVRD  RFHHFKNG+CSCGDYW
Sbjct: 780 AKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823

BLAST of CsaV3_5G029410 vs. Swiss-Prot
Match: sp|Q9M9E2|PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.1e-163
Identity = 283/734 (38.56%), Postives = 444/734 (60.49%), Query Frame = 0

Query: 88  VSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRY-DDVKPV 147
           +++F ++G++ +A  VF  + ++    ++ ++ GYAK    + A+    RM +   VKP 
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPD 195

Query: 148 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 207
           VY F  +L+ CG   DL RGKE+H  ++   +  ++  +  ++ MY KC  +  A  +FD
Sbjct: 196 VYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD 255

Query: 208 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 267
           RMP RD++SWN +I+G+ +NG   + LEL   M+     PD +TL +V+ A   +G   +
Sbjct: 256 RMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315

Query: 268 GKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 327
           G+ IH Y I  GFA  +++  +L  MY   GS   A  +F  M++K +VSW +M+ GY  
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEY 375

Query: 328 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISV 387
           N  P+KAI  +  M ++ + P  +T+   L ACA LGDL+ G  +HK   +  L S + V
Sbjct: 376 NFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIV 435

Query: 388 MNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGM 447
            N+LI+MYSKCK +D A DIF+N+  +  +SW ++I G   N R  EAL    +MK + +
Sbjct: 436 ANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK-MTL 495

Query: 448 KPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARK 507
           +P++ T+ + + A A +      K IH  ++R+ +  + F+  AL+DMY +CG ++ A  
Sbjct: 496 QPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWS 555

Query: 508 LFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGL 567
            F+    + V +WN ++ GY   G G   ++LFD+M K  V P++IT++S++  CS S +
Sbjct: 556 QFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQM 615

Query: 568 VDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAML 627
           V +GL +F  M +DYG+ P++ HY  +VDLLGRAG ++EA  FI+ MP++P   V+GA+L
Sbjct: 616 VRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL 675

Query: 628 GACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKK 687
            AC+IH  I++GE +A+ +FEL+    GY++LL N+YA   KW +VA+VR+ M++ GL  
Sbjct: 676 NACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTV 735

Query: 688 TPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVP-DTNLILDVEDDV 747
             GCS VE++ +VH+F S    HPQ+K I   LE    ++   G      +  +D  +  
Sbjct: 736 DAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEIS 795

Query: 748 QEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQ 807
           ++++   HSE+ AIAFGL+NT PG  I V KNL +C +CH+  K+IS    REI VRD +
Sbjct: 796 RDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAE 855

Query: 808 RFHHFKNGICSCGD 820
            FHHFK+G CSCGD
Sbjct: 856 HFHHFKDGECSCGD 866

BLAST of CsaV3_5G029410 vs. TrEMBL
Match: tr|A0A0A0KPP6|A0A0A0KPP6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G583260 PE=4 SV=1)

HSP 1 Score: 1664.8 bits (4310), Expect = 0.0e+00
Identity = 821/821 (100.00%), Postives = 821/821 (100.00%), Query Frame = 0

Query: 1   MRSSSVPPIAIVKAHNQTPLKSSSITIPSSPLPFHTLSERAHIPSHVYKHPAAVLLELCT 60
           MRSSSVPPIAIVKAHNQTPLKSSSITIPSSPLPFHTLSERAHIPSHVYKHPAAVLLELCT
Sbjct: 1   MRSSSVPPIAIVKAHNQTPLKSSSITIPSSPLPFHTLSERAHIPSHVYKHPAAVLLELCT 60

Query: 61  SMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLK 120
           SMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLK
Sbjct: 61  SMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLK 120

Query: 121 GYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAA 180
           GYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAA
Sbjct: 121 GYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAA 180

Query: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240
           NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ
Sbjct: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240

Query: 241 DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE 300
           DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE
Sbjct: 241 DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE 300

Query: 301 TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACA 360
           TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACA
Sbjct: 301 TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACA 360

Query: 361 DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNA 420
           DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNA
Sbjct: 361 DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNA 420

Query: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC 480
           MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC
Sbjct: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC 480

Query: 481 LDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFD 540
           LDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFD
Sbjct: 481 LDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFD 540

Query: 541 KMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRA 600
           KMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRA
Sbjct: 541 KMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRA 600

Query: 601 GRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLA 660
           GRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLA
Sbjct: 601 GRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLA 660

Query: 661 NIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLE 720
           NIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLE
Sbjct: 661 NIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLE 720

Query: 721 ELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRV 780
           ELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRV
Sbjct: 721 ELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRV 780

Query: 781 CGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 822
           CGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW
Sbjct: 781 CGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821

BLAST of CsaV3_5G029410 vs. TrEMBL
Match: tr|A0A1S3BEJ2|A0A1S3BEJ2_CUCME (pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488809 PE=4 SV=1)

HSP 1 Score: 1630.5 bits (4221), Expect = 0.0e+00
Identity = 800/821 (97.44%), Postives = 808/821 (98.42%), Query Frame = 0

Query: 1   MRSSSVPPIAIVKAHNQTPLKSSSITIPSSPLPFHTLSERAHIPSHVYKHPAAVLLELCT 60
           MRSSSVPPIAIVKAHN+TPLKSSSITIPSSPLPFHTLSER HIPSHVYKHPAAVLLELCT
Sbjct: 1   MRSSSVPPIAIVKAHNRTPLKSSSITIPSSPLPFHTLSERTHIPSHVYKHPAAVLLELCT 60

Query: 61  SMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLK 120
           SMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLK
Sbjct: 61  SMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLK 120

Query: 121 GYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAA 180
           GYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSF A
Sbjct: 121 GYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFGA 180

Query: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240
           NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ
Sbjct: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240

Query: 241 DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE 300
           DEGQRPDSITLVTVLPAAADVG LMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE
Sbjct: 241 DEGQRPDSITLVTVLPAAADVGSLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE 300

Query: 301 TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACA 360
           TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPT VTIMEALHACA
Sbjct: 301 TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTSVTIMEALHACA 360

Query: 361 DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNA 420
           DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKR DIASDIFNNLNGRTHVSWNA
Sbjct: 361 DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRADIASDIFNNLNGRTHVSWNA 420

Query: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC 480
           MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVI ALA+LS+TRHAKWIHGL+IRSC
Sbjct: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVILALADLSITRHAKWIHGLVIRSC 480

Query: 481 LDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFD 540
           LDKNIFVTTALVDMY+KCGAIHMARKLFDMI+DRHVITWNAMIDGYGTHGLGRAALDLFD
Sbjct: 481 LDKNIFVTTALVDMYAKCGAIHMARKLFDMINDRHVITWNAMIDGYGTHGLGRAALDLFD 540

Query: 541 KMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRA 600
           KMKKG VEPNDITYLSVISACSHSGLVDEGL HFKSMKQDYGLEPSMDHYG MVDLLGRA
Sbjct: 541 KMKKGTVEPNDITYLSVISACSHSGLVDEGLHHFKSMKQDYGLEPSMDHYGTMVDLLGRA 600

Query: 601 GRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLA 660
           GRIKEAWDFIENMPISPGITVYGAMLGACKIHKN+E GEKAA KLFELNPDEGGYHVLLA
Sbjct: 601 GRIKEAWDFIENMPISPGITVYGAMLGACKIHKNVEFGEKAANKLFELNPDEGGYHVLLA 660

Query: 661 NIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLE 720
           NIYASTSKWSKVAEVRKTMEKKGLKKTPGCS+VELRNEVHSFYSGSTTHPQSKRIYAFLE
Sbjct: 661 NIYASTSKWSKVAEVRKTMEKKGLKKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLE 720

Query: 721 ELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRV 780
           EL YEIKAAGYVPDTN ILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRV
Sbjct: 721 ELGYEIKAAGYVPDTNSILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRV 780

Query: 781 CGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 822
           CGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW
Sbjct: 781 CGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821

BLAST of CsaV3_5G029410 vs. TrEMBL
Match: tr|A0A2P6SB16|A0A2P6SB16_ROSCH (Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0329341 PE=4 SV=1)

HSP 1 Score: 1326.2 bits (3431), Expect = 0.0e+00
Identity = 630/817 (77.11%), Postives = 720/817 (88.13%), Query Frame = 0

Query: 18  TPLKSSSIT-IPSSPLP------------FHTLSERAHIPSHVYKHPAAVLLELCTSMKE 77
           TPL S + T  PSSP P            FH LS+R+HIPSHVYKHP A+LLELCTSM+E
Sbjct: 9   TPLLSITNTKTPSSPPPPISTRLPIPTSTFHQLSQRSHIPSHVYKHPTAILLELCTSMRE 68

Query: 78  LHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAK 137
           LHQI PL+IKNGLYNEH FQTKLVSLF KYGS  EA RVF+ + DKLD  YHT+LKGYAK
Sbjct: 69  LHQIFPLIIKNGLYNEHYFQTKLVSLFCKYGSPIEAHRVFDAVGDKLDVFYHTLLKGYAK 128

Query: 138 NSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFA 197
           NSSL  A++F CR+++D V PVVYNFTYLLK CGDNADL+RGKEIHG LITN FA N+FA
Sbjct: 129 NSSLGEAISFFCRLKHDGVAPVVYNFTYLLKACGDNADLRRGKEIHGSLITNGFATNLFA 188

Query: 198 MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQ 257
           MTGVVN+YAKCRQIDDAYKMFDRMPERDLVSWNTI+A ++QNGFA++ALELV+RMQ+EGQ
Sbjct: 189 MTGVVNLYAKCRQIDDAYKMFDRMPERDLVSWNTIVAAYAQNGFARRALELVIRMQEEGQ 248

Query: 258 RPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARL 317
           RPDSITLVT LPA AD G L++GKSIH Y IRA F  LVNISTAL DMYSKCGSV TAR 
Sbjct: 249 RPDSITLVTALPAVADFGSLVIGKSIHAYVIRASFESLVNISTALLDMYSKCGSVATARS 308

Query: 318 IFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGD 377
           IF+ M+ KTVVSWNSM+DGY QN +PE+A+A+F+KML+EG +PT VTIMEALHACADLGD
Sbjct: 309 IFNRMNHKTVVSWNSMIDGYAQNEDPEEAMAIFQKMLDEGFEPTNVTIMEALHACADLGD 368

Query: 378 LERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILG 437
           LERGKFVHK +DQLNLG D+SV+NSLISMYSKCKRVDIA+ +F  L G+T VSWNAMILG
Sbjct: 369 LERGKFVHKLLDQLNLGYDVSVVNSLISMYSKCKRVDIAAKLFRGLKGKTIVSWNAMILG 428

Query: 438 YAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKN 497
           +AQNGRVSEAL+ F EM+S  +KPDSFTMVSVIPALAELSVTR AKWIHGL++R C DKN
Sbjct: 429 FAQNGRVSEALSHFCEMQSQNIKPDSFTMVSVIPALAELSVTRQAKWIHGLVVRKCFDKN 488

Query: 498 IFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKK 557
           +FV TALVDMY+KCGA+H ARKLFDM+ DRHV TWN+MIDGYGT+GLG+AA++LF++MKK
Sbjct: 489 VFVMTALVDMYAKCGAVHTARKLFDMMDDRHVTTWNSMIDGYGTNGLGKAAVELFNEMKK 548

Query: 558 GAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 617
           G ++PNDIT+L VISACSHSGLV++GL+ F+SMK DYGLEP+MDHYGAMVDLLGRAGR+ 
Sbjct: 549 GIIKPNDITFLCVISACSHSGLVEDGLQFFESMKDDYGLEPAMDHYGAMVDLLGRAGRLN 608

Query: 618 EAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYA 677
           EAWDFI+ MP+ PGITV+GAMLGAC+IHKN+E+GEKAA K+FELNP EGGYHVLLANIY+
Sbjct: 609 EAWDFIQKMPMEPGITVFGAMLGACRIHKNVELGEKAADKIFELNPVEGGYHVLLANIYS 668

Query: 678 STSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVY 737
           + S W KVA+VR TMEKKGLKKTPGCS+V+L+N+VH+FYSGST+HPQSKRIY +LE L  
Sbjct: 669 TASMWDKVAKVRTTMEKKGLKKTPGCSLVDLKNQVHTFYSGSTSHPQSKRIYTYLETLGD 728

Query: 738 EIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDC 797
           +IKAAGYVPDTN I DVEDDV+EQLLNSHSEKLAIAFGLLNT+PGTTIH+RKNLRVCGDC
Sbjct: 729 KIKAAGYVPDTNSIHDVEDDVKEQLLNSHSEKLAIAFGLLNTTPGTTIHIRKNLRVCGDC 788

Query: 798 HNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 822
           HNATKYISLVTGREIIVRDM RFHHF+NG CSCGDYW
Sbjct: 789 HNATKYISLVTGREIIVRDMHRFHHFRNGTCSCGDYW 825

BLAST of CsaV3_5G029410 vs. TrEMBL
Match: tr|A0A2I4GZP2|A0A2I4GZP2_9ROSI (pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Juglans regia OX=51240 GN=LOC109012283 PE=4 SV=1)

HSP 1 Score: 1322.0 bits (3420), Expect = 0.0e+00
Identity = 618/787 (78.53%), Postives = 707/787 (89.83%), Query Frame = 0

Query: 35  HTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKY 94
           HTLS R HIP+HVY HP+A+LLELCTS+KELHQIIP ++KNGLYNEHLFQTKLVSLF  Y
Sbjct: 40  HTLSPRIHIPAHVYTHPSALLLELCTSLKELHQIIPPIVKNGLYNEHLFQTKLVSLFCNY 99

Query: 95  GSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLL 154
           GS+NEAARVFEPI+DKLDALYHTMLKGYAKNSSL++A++F CRM+ DDVKPVVYNFTYLL
Sbjct: 100 GSVNEAARVFEPIEDKLDALYHTMLKGYAKNSSLDSAVSFFCRMKLDDVKPVVYNFTYLL 159

Query: 155 KVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLV 214
           KVCGDN DL+RGKEIHGQ+ITN +A+NVFAMTGVVN+YAKCRQID AYKMFDRMPERDLV
Sbjct: 160 KVCGDNTDLRRGKEIHGQVITNGYASNVFAMTGVVNLYAKCRQIDQAYKMFDRMPERDLV 219

Query: 215 SWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYA 274
           SWNTIIAGF+QNG  K   ELVLRMQ+EGQ+PDSITLVT+LPAAAD+G + +G SIHGY 
Sbjct: 220 SWNTIIAGFAQNGLPKVTFELVLRMQEEGQKPDSITLVTILPAAADIGSMKIGNSIHGYV 279

Query: 275 IRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAI 334
           +RAGF  LVNISTAL DMYSKCGSV TARLIFD M Q+TVVSWNSM+ GY QNG+ E+A+
Sbjct: 280 VRAGFGSLVNISTALVDMYSKCGSVGTARLIFDRMKQRTVVSWNSMIAGYGQNGDAEEAM 339

Query: 335 AVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMY 394
            +F+ ML+EG +PT VTIME LHACADLGDL RGKF+H+ +DQL LGSD+SVMNSLISMY
Sbjct: 340 KIFQNMLDEGFEPTNVTIMETLHACADLGDLARGKFIHELLDQLKLGSDVSVMNSLISMY 399

Query: 395 SKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMV 454
            KCKRVD+A+ +F NL G+T V+WNAMILGYAQNGRV+EAL  + EM+S  +KPDSFTMV
Sbjct: 400 CKCKRVDLAAKVFKNLRGKTLVTWNAMILGYAQNGRVNEALRHYCEMQSQNIKPDSFTMV 459

Query: 455 SVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDR 514
           SVIPALAELSVTR AKW+HG++IR+C DK++FV TALVDMY KCGAI  ARKLFDM+ +R
Sbjct: 460 SVIPALAELSVTRQAKWMHGIVIRTCWDKDVFVVTALVDMYGKCGAIDTARKLFDMMQER 519

Query: 515 HVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHF 574
           HV TWNAMIDGYGTHGLG+AA+ LF+ M+KG ++PNDIT+L VISACSHSGLV+EGL  F
Sbjct: 520 HVTTWNAMIDGYGTHGLGKAAVALFNDMQKGTIKPNDITFLCVISACSHSGLVEEGLSLF 579

Query: 575 KSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKN 634
            SMK+DYGL+P+MDHYGAMVDLLGR+G++ EAWDFI+ MPI PGITV+GAMLGACKIHKN
Sbjct: 580 SSMKKDYGLKPTMDHYGAMVDLLGRSGKLNEAWDFIQGMPIEPGITVFGAMLGACKIHKN 639

Query: 635 IEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVE 694
           +E+GEKAA+KLFELNPDEGGYHVLL+NIYA+ S W K+A+VR  MEKKGL+KTPGCS+V+
Sbjct: 640 VELGEKAAEKLFELNPDEGGYHVLLSNIYATASMWDKMAKVRTMMEKKGLQKTPGCSLVD 699

Query: 695 LRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHS 754
            +NEVHSFYSGST HPQSKRIYAFLE+L   IKAAGYVPDTN I DVEDDV+EQLLNSHS
Sbjct: 700 FKNEVHSFYSGSTRHPQSKRIYAFLEKLGEVIKAAGYVPDTNSIHDVEDDVKEQLLNSHS 759

Query: 755 EKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGI 814
           EKLAI+F LLNTSPGTTIH+RKNLRVCGDCHNATKYISLVTGREI+VRDM RFHHF+NG 
Sbjct: 760 EKLAISFALLNTSPGTTIHIRKNLRVCGDCHNATKYISLVTGREIVVRDMHRFHHFRNGT 819

Query: 815 CSCGDYW 822
           CSCGDYW
Sbjct: 820 CSCGDYW 826

BLAST of CsaV3_5G029410 vs. TrEMBL
Match: tr|M5X677|M5X677_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G049000 PE=4 SV=1)

HSP 1 Score: 1313.5 bits (3398), Expect = 0.0e+00
Identity = 626/819 (76.43%), Postives = 719/819 (87.79%), Query Frame = 0

Query: 3   SSSVPPIAIVKAHNQTPLKSSSITIPSSPLPFHTLSERAHIPSHVYKHPAAVLLELCTSM 62
           ++S+ P  +  +  + P+ +           FHTLS+R HIPSHVY HPAA+LLELCTS+
Sbjct: 15  TNSITPPPLTPSRARPPISAPQFQ------AFHTLSQRTHIPSHVYTHPAAILLELCTSI 74

Query: 63  KELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGY 122
           KEL+QIIPL+IKNGLYNEHLFQTKLVSLF  YGS +EA RVFE ++DKL+  YHT+LKGY
Sbjct: 75  KELNQIIPLIIKNGLYNEHLFQTKLVSLFCNYGSPSEAFRVFETVEDKLEVFYHTLLKGY 134

Query: 123 AKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANV 182
           AKNSSL  A++F CRM+ D V+PVVYNFTYLLKVCGDNADL+RGKEIH  LI++ FA N+
Sbjct: 135 AKNSSLGDAMSFFCRMKSDGVRPVVYNFTYLLKVCGDNADLRRGKEIHAHLISSGFATNL 194

Query: 183 FAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDE 242
           FAMT VVNMYAKCRQI++AYKMFDRMPERDLVSWNTIIAG++QNG AK ALELV+RMQ+E
Sbjct: 195 FAMTAVVNMYAKCRQINEAYKMFDRMPERDLVSWNTIIAGYAQNGLAKIALELVIRMQEE 254

Query: 243 GQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETA 302
           GQ+PDSITLVT+LPA AD G L++GKSIH Y +RA F  LVNISTAL DMYSKCGSV TA
Sbjct: 255 GQKPDSITLVTLLPAVADYGSLIIGKSIHAYVLRASFESLVNISTALLDMYSKCGSVGTA 314

Query: 303 RLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADL 362
           RLIF+ M QKT VSWNSM+DGYVQN + E+A+ +F+KML+EG  PT VTIMEALHACADL
Sbjct: 315 RLIFNRMKQKTAVSWNSMIDGYVQNEDAEEAMEIFQKMLDEGFQPTNVTIMEALHACADL 374

Query: 363 GDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMI 422
           GDLERGKFVHK VDQL LGSD+SVMNSL+SMYSKCKRVDIA+ IF NL G+T VSWN MI
Sbjct: 375 GDLERGKFVHKLVDQLKLGSDVSVMNSLMSMYSKCKRVDIAAKIFKNLLGKTLVSWNTMI 434

Query: 423 LGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLD 482
           LGYAQNGRVSEAL+ F +M+S  MKPDSFTMVSVIPALAELSVTR AKWIHGL+IR+C D
Sbjct: 435 LGYAQNGRVSEALSHFCQMQSQNMKPDSFTMVSVIPALAELSVTRQAKWIHGLVIRTCFD 494

Query: 483 KNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKM 542
           KNIFV TALVDMY+KCGA+H ARKLFDM+ +RHV TWNAMIDGYGT+GLG+AA+DLF++M
Sbjct: 495 KNIFVMTALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTNGLGKAAVDLFNEM 554

Query: 543 KKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGR 602
           +KG ++PNDIT+L VISACSHSGLV+EGL++F SMK+DYGLEP+MDHYGAMVDLLGRAG+
Sbjct: 555 EKGTIKPNDITFLCVISACSHSGLVEEGLQYFASMKEDYGLEPAMDHYGAMVDLLGRAGQ 614

Query: 603 IKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANI 662
           + EAWDFI+ MP+ PGITV+GAMLGAC+ HKN+E+GE+AA K+FELNP EGGYHVLLANI
Sbjct: 615 LSEAWDFIQKMPMEPGITVFGAMLGACRTHKNVELGERAADKIFELNPVEGGYHVLLANI 674

Query: 663 YASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEEL 722
           Y++ S W KVA+VRK ME KGL+KTPGCS+V+LRNEVH+FYSGST+HPQSKRIY FLE L
Sbjct: 675 YSTASLWDKVAKVRKMMEMKGLQKTPGCSLVDLRNEVHTFYSGSTSHPQSKRIYTFLETL 734

Query: 723 VYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCG 782
             EIKAAGYVPDTN I DVE DV+EQLLNSHSEKLAIAFGLLNT+PGTTIH+RKNLRVCG
Sbjct: 735 GDEIKAAGYVPDTNSIHDVEADVKEQLLNSHSEKLAIAFGLLNTTPGTTIHIRKNLRVCG 794

Query: 783 DCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 822
           DCHNATKYISLVTGREIIVRDM RFHHFKNG CSCGDYW
Sbjct: 795 DCHNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 827

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004147126.20.0e+00100.00PREDICTED: pentatricopeptide repeat-containing protein At1g11290 isoform X1 [Cuc... [more]
XP_008445930.10.0e+0097.44PREDICTED: pentatricopeptide repeat-containing protein At1g11290, chloroplastic ... [more]
XP_023541274.10.0e+0089.36pentatricopeptide repeat-containing protein At1g11290, chloroplastic [Cucurbita ... [more]
XP_022945178.10.0e+0089.36pentatricopeptide repeat-containing protein At1g11290, chloroplastic [Cucurbita ... [more]
XP_022967032.10.0e+0089.49pentatricopeptide repeat-containing protein At1g11290, chloroplastic isoform X1 ... [more]
Match NameE-valueIdentityDescription
AT1G11290.10.0e+0069.63Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G57430.15.7e-17441.91Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G30700.11.7e-17038.69Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G33990.14.6e-16839.53Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G15510.16.3e-16538.56Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q3E6Q1|PPR32_ARATH0.0e+0069.63Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
sp|Q7Y211|PP285_ARATH1.0e-17241.91Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... [more]
sp|Q9SUH6|PP341_ARATH3.1e-16938.69Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... [more]
sp|O81767|PP348_ARATH8.4e-16739.53Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX... [more]
sp|Q9M9E2|PPR45_ARATH1.1e-16338.56Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0KPP6|A0A0A0KPP6_CUCSA0.0e+00100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G583260 PE=4 SV=1[more]
tr|A0A1S3BEJ2|A0A1S3BEJ2_CUCME0.0e+0097.44pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Cucumis ... [more]
tr|A0A2P6SB16|A0A2P6SB16_ROSCH0.0e+0077.11Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS... [more]
tr|A0A2I4GZP2|A0A2I4GZP2_9ROSI0.0e+0078.53pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Juglans ... [more]
tr|M5X677|M5X677_PRUPE0.0e+0076.43Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G049000 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR032867DYW_dom
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006464 cellular protein modification process
biological_process GO:0016556 mRNA modification
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0015031 protein transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004519 endonuclease activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G029410.1CsaV3_5G029410.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 589..613
e-value: 0.091
score: 13.0
coord: 489..513
e-value: 0.34
score: 11.2
coord: 387..408
e-value: 0.12
score: 12.6
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 115..160
e-value: 1.9E-4
score: 21.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 416..450
e-value: 2.7E-9
score: 34.6
coord: 114..142
e-value: 9.5E-4
score: 17.2
coord: 214..247
e-value: 7.2E-6
score: 23.9
coord: 552..586
e-value: 0.0013
score: 16.8
coord: 186..214
e-value: 5.4E-4
score: 18.0
coord: 517..550
e-value: 1.0E-6
score: 26.5
coord: 315..348
e-value: 8.9E-11
score: 39.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 212..255
e-value: 4.5E-8
score: 33.0
coord: 516..562
e-value: 2.7E-14
score: 52.9
coord: 415..461
e-value: 2.3E-12
score: 46.8
coord: 312..352
e-value: 1.4E-10
score: 41.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 550..585
score: 8.824
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 181..211
score: 8.89
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 111..145
score: 8.791
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 515..549
score: 11.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 383..413
score: 7.629
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 414..448
score: 12.836
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 146..180
score: 5.272
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 212..246
score: 11.575
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 282..312
score: 5.678
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 313..347
score: 13.844
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 586..616
score: 7.662
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 484..514
score: 7.147
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 651..686
score: 6.062
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 488..707
e-value: 5.9E-42
score: 146.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 34..176
e-value: 1.7E-11
score: 46.2
coord: 268..375
e-value: 3.1E-22
score: 81.5
coord: 376..479
e-value: 2.0E-18
score: 69.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 177..267
e-value: 9.6E-20
score: 72.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 269..407
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 688..811
e-value: 2.6E-38
score: 130.7
NoneNo IPR availablePANTHERPTHR24015:SF605SUBFAMILY NOT NAMEDcoord: 118..738
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 118..738