CsaV3_5G025880 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G025880
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr5 : 21064115 .. 21068254 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCAGTGAAGTATAATCCAGATTTGTTGGACGTCCTTGACGTTCAAGACGACGAAGACACTCTCTCTTTCCGTGATTTTCCAATTCTCGAACCACAATCGGAAGCCGGGGATTCCTGCAGTGATCACGACGATCGCCAAGATTTCTTCGAATTTCGCACCGATTTGAAGCGGAAAACAAGTTCATTGTTGCCTCCAAGTGAAATCGTTTTCTGCGGGAGGACTTTGGACATATTCCGAGATGAAGACTCTGCAAGTTCTAGAAATAGATCGGAATCATCGTTGATTCGAAACCAGAGCTTTCGGTACGGAAATGGATCGAGACCGTTTTCTTCGTCTGCAGTGGGCGGATTATTTGAAATTCAACGGAGTAATTCGAGGAGGCCGATGGCGTTGATAGGATTAACAAAAACTCCGTCGAGAATAGAGTTGAGTGAGATTCGGAAGAGACAGGCTCGGTTAGCACCGACCCCGATGTTCCACGTGGTTCCGAAGGAGACGACGGTAAGTGTTGTCACCGCGGATGGGTACGAGAGCGGAATCAGCCCGTGGAGGTTGATTAAGCCTCTCAGGTATAGATCTGTTGTGGTTAGAGTATTGGCTAAGGCAGCTTCGACTTGTATGAGTCTTGTGTGAGTGAGGGATGGCTTGATGACGTTATTGTTTCGCTTTCTACATTTGCTTCATTGTAACCATTATTCTTCACATTTTTTTAATTCTTTAATTTTCGGTTTTTGTATAAACTTTAGCTTCCCACCTTTCTCACATTTATGAGTTTGATATGTACATAAGAGCAAGTGGAATATTTCATTACATAATAGTAAACTTCACCAAATAAAAATACCGCAAAATATCAATTTAAACTTGGGTTTTTAAAAAATAATACTACTTGGGCAGATTTATTCCACAACACAACTGCTGCGGTTGTATTATCAGTTTTTTATATTTTAATATTAATTTTAAGATGTCATATTATGAGTTTTTATATTTTAATATTAATTTTGAAATATCATCGTAAACATAGGTTAAATAATGCTTTAATTTAGCTAAGCTAAATTTTAGTTACAGTACAATGGTTGTTGGCTCACTCTTCAACGGTTATTACAATTATTTTTTTAAATCTCTAAATTTTTTTCTAAATTGTAACAAAATAAATTTTATTTCAAACAATCAATAATTAAAAAGAAAAAAAAAACTTATCTAACCTAACAAATATTTAGAAAAAAACATTTTGTGTAATTTTTTAATTCACATTATATATTAATTTAATTTAATTTCAAAATTAAAGACTACAAGTTAATTCAGTAACATTTCAATAATTTTATTTATTCAAGACTCCAAATTTCAATTTTATTGATAAGTTTCAATAATGTTATAAAATAGTTTTTTTAAAAAATGAACAAAACCTAACTAAGATAAAATTCTAACTTTTTTCTAGTGGTCGTTCGCTATCTAATAAGTATTTAGAAAAAAAATGCAACAAAGATGATGATCTAAATTTCCACTCTCTCAACAATATTTATATGAAAAAAGTATTATTCTTTTCTTTATCTTTTTTTATGCAATTTTTAAATTCACGTTTACATTACAAAATATGACGTGGAAATTGCTAGTTTTTTCTTTATTACTATAAATGTAGTGAATGTCGTTATTGGAGCATCAACGAAATGTCGAAATCTTTTTTTTAAACATTTTTAGTGTGATATTATATAGTGCATGATGACCCACTATATAAAATTTTTGGATCCGCCATTCCCAGTCAACACGCGATTAATTGATCATATGCTTGTATGTAATTCGTCTACTAAACGATCATGATACACGATTGTCTAGGAATTGATACACGATCATATAGGTAGTATCAAAACGATCATGTAGTTTTCTTTAATGAGGAGAAAAATGATTCAAATCTAAACGATCGTGTTAATCACGCTAAACGATCTTTTAGATCATATCCACACGATCGTGTAATTAATTCTTTTTAAACGATGGAAAAATTGCTTCAAATCTAAACAATCGTGTTGACCATGCATGTTAAATGATCATATTGAATATGGTAAGCGGTCGTTTGGAACATATCCACACGATCGCGTAGTTCATTTTAAATGATGGAAAAAGGACTTCAAATCTAAACAATCATGTTGATCATGGTAAATGATCGTGTTGACTATGGTAAGCGATTGCTTAGATCATATTTACACAAATATGTAGTCCTTTTTAAACGATGTGAAAAGGACTTCAAATCTAAACGATCATGTTGACTAGGTAGGCGATCGTTTAGATCATATCAAATATCATAGTGATATTTAAACGATCTTGATATTCTGGAAGATGAGCTTGAAGAAAGAAAGAAAAAAAGATGATGAATAAAAATAGAAGAAAGAAAATATGAAAAGATGAGCTGAAGAAATTTGAAAGAGAAGATGAATAAATTGCAAAGAAGAAGAAAAAACAGAAGTGATGAATCGTTCAAAATATCAAGAGCAAATCTAGAATTTACAAAATATTTTACTGACTTCATGGGCTTTTCGTTTTTGTTATATTGACCATAAATATTTTGGTGTTTTGTTATATTTAAGAAAATTAACCTTTAAACTTTAAACTTTGAGGTCATATCAATTTAAACCATAGACTAATAATTGTATCAATTTAAACTTCACTATGTAAAACTTAGAGTTTTTAAAAAATATAACAAACTGGCAAAATATTTATATTATATAAAACAATTTTGAAAATTGAAAAAATTCCATAGGCCCACAATGTAAAGTACCATAATTACCCATGTCAACTCGTGATAAATCAACCACATACGCTCGATCATGTAGATTTTGATATACGATCTTGGACATACCATGCCCCAAGATGCCTCGGGATGAAAGAACATTGCTTTTAATTCATTCGATCTGAGGCATACAATACACTAAGATGACTCGAGATGAAAGACATAAATGTAGATCTACACAATCCTATACTTCCATTTTAAACGATGACTTTCAAATTTAAACGATCATGTAGATTACAATACATGACATTAGACCTTAGTTGTATAGAGATGCATCGAGATGACAGAATTCTGCCTTTAATACATTCGATTTTGGGTATACAATGCCCCGAGATGAAAGCATTCTTCCTTTAGTTATATTGGATCTCAGACCTTAGTGGCACCAAAATGGCTCGAAGATGAAAGAATTGTCTTTATTTTATTCGATCTCGGACATACATTGCCTCGAGATGTCTCGAAATGAAAGACTTTTGCATGTCTTTAGTTATTCAATCTTGGAACCTTAATTGCACCGAGATGACTCAAGATTAATAAATTGTAAAGAAGATATAAATCGAAAGGTCATATATATAATTTACAAAAAAAAAAAAAAATATTGTATCATAGACTTATTATCATACGAGCCATGATAATTTTGGTTTGTTACATTTATGTAAATTACTTAACCATTTATGTAAATTACTTTTAAAGAACTTACAACCCACAATCCTGTTTCATTAAACTCTTGAATTTTTGTAAGTACTATCAATTGGATCCATTATTTATGTTTATATTTCAATATTGTTCTTGCATTAATTCTCTCACGTGTTTGATTAGTATGATTGTGAGTGATAGTATTTTTTGAACGAAATATAATAGATTATAAAATATGTTGATACAAATGTAATTGTTTAAAAATTTTAAATTGATATATATTACAATCCTTTTTTTTTTGTATAATAATGTGAGAATTTCTAACCGCGATTCAACTTCTAATTTTGTGTCTAATAAATTTTTAAATCTATTAACAAGCCTCTAAACTTTTTATTTATTTATTTTTCTACTTAATCAAAGTTTAAGGATGTAATATACGTATTCACATTTATGTACATATAATTGATTCATTCGCTTTAAAAGATGTTGAATATGCCATGACCTAGTAAATATAATTGAAACTCTATAAACGTATTTGTCATTTGTTAAAAAAAAAAAGAGAGATTACACTCACATAAACTACACTCTCTCAAGTTTAACTTGCCAATGAAATCAGAACAATTGGCTAAGGTTATCCTTAAATAAACTTCTTCTGCAGGCTGATGTTGCATATGAAGTTGACACCTCCTACTTCAAAATTTGATTGTTTTGTGCATAGTTAA

mRNA sequence

ATGGAGTCAGTGAAGTATAATCCAGATTTGTTGGACGTCCTTGACGTTCAAGACGACGAAGACACTCTCTCTTTCCGTGATTTTCCAATTCTCGAACCACAATCGGAAGCCGGGGATTCCTGCAGTGATCACGACGATCGCCAAGATTTCTTCGAATTTCGCACCGATTTGAAGCGGAAAACAAGTTCATTGTTGCCTCCAAGTGAAATCGTTTTCTGCGGGAGGACTTTGGACATATTCCGAGATGAAGACTCTGCAAGTTCTAGAAATAGATCGGAATCATCGTTGATTCGAAACCAGAGCTTTCGGTACGGAAATGGATCGAGACCGTTTTCTTCGTCTGCAGTGGGCGGATTATTTGAAATTCAACGGAGTAATTCGAGGAGGCCGATGGCGTTGATAGGATTAACAAAAACTCCGTCGAGAATAGAGTTGAGTGAGATTCGGAAGAGACAGGCTCGGTTAGCACCGACCCCGATGTTCCACGTGGTTCCGAAGGAGACGACGGTAAGTGTTGTCACCGCGGATGGGTACGAGAGCGGAATCAGCCCGTGGAGGTTGATTAAGCCTCTCAGGTATAGATCTGTTGTGGTTAGAGTATTGGCTAAGGCAGCTTCGACTTGTATGAGTCTTGTGCTGATGTTGCATATGAAGTTGACACCTCCTACTTCAAAATTTGATTGTTTTGTGCATAGTTAA

Coding sequence (CDS)

ATGGAGTCAGTGAAGTATAATCCAGATTTGTTGGACGTCCTTGACGTTCAAGACGACGAAGACACTCTCTCTTTCCGTGATTTTCCAATTCTCGAACCACAATCGGAAGCCGGGGATTCCTGCAGTGATCACGACGATCGCCAAGATTTCTTCGAATTTCGCACCGATTTGAAGCGGAAAACAAGTTCATTGTTGCCTCCAAGTGAAATCGTTTTCTGCGGGAGGACTTTGGACATATTCCGAGATGAAGACTCTGCAAGTTCTAGAAATAGATCGGAATCATCGTTGATTCGAAACCAGAGCTTTCGGTACGGAAATGGATCGAGACCGTTTTCTTCGTCTGCAGTGGGCGGATTATTTGAAATTCAACGGAGTAATTCGAGGAGGCCGATGGCGTTGATAGGATTAACAAAAACTCCGTCGAGAATAGAGTTGAGTGAGATTCGGAAGAGACAGGCTCGGTTAGCACCGACCCCGATGTTCCACGTGGTTCCGAAGGAGACGACGGTAAGTGTTGTCACCGCGGATGGGTACGAGAGCGGAATCAGCCCGTGGAGGTTGATTAAGCCTCTCAGGTATAGATCTGTTGTGGTTAGAGTATTGGCTAAGGCAGCTTCGACTTGTATGAGTCTTGTGCTGATGTTGCATATGAAGTTGACACCTCCTACTTCAAAATTTGATTGTTTTGTGCATAGTTAA

Protein sequence

MESVKYNPDLLDVLDVQDDEDTLSFRDFPILEPQSEAGDSCSDHDDRQDFFEFRTDLKRKTSSLLPPSEIVFCGRTLDIFRDEDSASSRNRSESSLIRNQSFRYGNGSRPFSSSAVGGLFEIQRSNSRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSVVTADGYESGISPWRLIKPLRYRSVVVRVLAKAASTCMSLVLMLHMKLTPPTSKFDCFVHS

Homology

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BLAST of CsaV3_5G025880 vs. NCBI nr
Match: KGN51223.1 (hypothetical protein Csa_5G494420 [Cucumis sativus])

HSP 1 Score: 412.9 bits (1060), Expect = 7.1e-112
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MESVKYNPDLLDVLDVQDDEDTLSFRDFPILEPQSEAGDSCSDHDDRQDFFEFRTDLKRK 60
           MESVKYNPDLLDVLDVQDDEDTLSFRDFPILEPQSEAGDSCSDHDDRQDFFEFRTDLKRK
Sbjct: 1   MESVKYNPDLLDVLDVQDDEDTLSFRDFPILEPQSEAGDSCSDHDDRQDFFEFRTDLKRK 60

Query: 61  TSSLLPPSEIVFCGRTLDIFRDEDSASSRNRSESSLIRNQSFRYGNGSRPFSSSAVGGLF 120
           TSSLLPPSEIVFCGRTLDIFRDEDSASSRNRSESSLIRNQSFRYGNGSRPFSSSAVGGLF
Sbjct: 61  TSSLLPPSEIVFCGRTLDIFRDEDSASSRNRSESSLIRNQSFRYGNGSRPFSSSAVGGLF 120

Query: 121 EIQRSNSRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSVVTADGYES 180
           EIQRSNSRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSVVTADGYES
Sbjct: 121 EIQRSNSRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSVVTADGYES 180

Query: 181 GISPWRLIKPLRYRSVVVRVLAKAASTCMSLV 213
           GISPWRLIKPLRYRSVVVRVLAKAASTCMSLV
Sbjct: 181 GISPWRLIKPLRYRSVVVRVLAKAASTCMSLV 212

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BLAST of CsaV3_5G025880 vs. NCBI nr
Match: GAV73487.1 (hypothetical protein CFOL_v3_16972 [Cephalotus follicularis])

HSP 1 Score: 85.1 bits (209), Expect = 3.4e-13
Identity = 70/206 (33.98%), Postives = 99/206 (48.06%), Query Frame = 0


Query: 9   DLLDVLDVQDDEDTLSFRDFPI--LEPQSEAGDSCSDHDDRQDFFEFRTDLKRKTSSLLP 68
           D  ++ D++D EDTLS  D PI   EP  E   S S+    Q+ FEF  D   + +  L 
Sbjct: 3   DTTNLHDLEDFEDTLSLSDLPIHNQEPYPEYQSSPSN----QELFEFSIDTNPEAN--LK 62

Query: 69  PSEIVFCGRTLDIFRDEDSASSRNRSESSLIRNQSFRYGNGSRPFSSSAVGGLFEIQRSN 128
              I+FCG+ +   R+E +    + S S  +   +++                      N
Sbjct: 63  VDNIIFCGKIIP-QRNEPTNHINDHSSSLHVVTSNYK---------------PHRYHSCN 122

Query: 129 SRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSVVTADGYESGISPWR 188
           S +   LIG  K P  ++LS+I+KRQ R APTPMF VV  E    VV       G   W 
Sbjct: 123 SNKHKFLIGSAKVPWEMQLSDIKKRQKRRAPTPMFPVVTTER--EVVNGHREAVGSGCWG 182

Query: 189 LIKPLRYRSVVVRVLAKAASTCMSLV 213
           L++PL++RS +VR LAKA   C+  V
Sbjct: 183 LLRPLKFRSNIVRALAKAYLGCIPRV 184

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BLAST of CsaV3_5G025880 vs. NCBI nr
Match: XP_023887327.1 (uncharacterized protein LOC111999433 [Quercus suber] >POE67526.1 hypothetical protein CFP56_36692 [Quercus suber])

HSP 1 Score: 82.8 bits (203), Expect = 1.7e-12
Identity = 69/214 (32.24%), Postives = 96/214 (44.86%), Query Frame = 0


Query: 19  DEDTLSFRDFPILEPQSEAGD-----SCSDHDDRQDFFEFRTDLKRKTSSLLPPSEIVFC 78
           +ED LS  D  I +  +E  +     S SD   R D FEF T      +  +    ++FC
Sbjct: 14  EEDALSLCDLSINDVNAELEEPNSFSSYSDSPSRPDLFEFST-----ANPTIKNDTVIFC 73

Query: 79  GRTLDIFRDEDSASSRNR-----SESSLIRNQSF---RYGNGSRPFSSSA-VGGLFEIQR 138
           GR +             R        S  ++Q F   R+   +R  S      G F  Q+
Sbjct: 74  GRVIHQKHXXXXXXXXPRRRALWGSESFNKSQKFHSARFTGNTRSSSLRVPATGSFRYQK 133

Query: 139 SNSRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSVVTADGYES---- 198
             S++   +IGL K   ++ELSEIRKRQAR  P PM  VV   T   +   DG +     
Sbjct: 134 CESKKHKVIIGLAKIQPQMELSEIRKRQARRGPVPMIPVVVDGTEPLIAGGDGGKKSGGN 193

Query: 199 --GISPWRLIKPLRYRSVVVRVLAKAASTCMSLV 213
               SPW L++PLR R+    VLA+A+S C  L+
Sbjct: 194 GPAKSPWALLRPLRCRAHFASVLARASSACFPLL 222

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BLAST of CsaV3_5G025880 vs. NCBI nr
Match: XP_010658647.1 (PREDICTED: uncharacterized protein LOC104881153 [Vitis vinifera])

HSP 1 Score: 77.4 bits (189), Expect = 7.1e-11
Identity = 65/204 (31.86%), Postives = 99/204 (48.53%), Query Frame = 0


Query: 15  DVQDDEDTLSFRDFPILEPQSEAGDSCSDHDDRQDFFEFRTDLKRKTSSLLPPSEIVFCG 74
           D +D ED LSF D PI   QS       D      FFEF ++    +   LPP+      
Sbjct: 9   DFEDSEDALSFCDLPIDTLQSHDSHHHPDPSPDDHFFEFLSEPIIISGRTLPPTN--HPS 68

Query: 75  RTLDIFRDED-SASSRNRSESSLIRNQSFRYGNGSRPFSSS----AVGGLFEIQRSNSRR 134
             L  +R E  SA++ +RS +S++R++S R    S P  SS       G+     + S++
Sbjct: 69  VDLATWRSESFSAATPSRSRTSVVRSESLRL---SVPKGSSQNQPGFSGMRVTPAARSKK 128

Query: 135 PMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSVVTADGYESGISPWRLIK 194
              + GL K P  +ELS++R+RQ+R AP P+  V           A G  +G   W L++
Sbjct: 129 HAFMFGLPKFPLEMELSDMRRRQSRRAPAPIIPVAEARE----AAAGGKSAGKGQWGLLR 188

Query: 195 PLRYRSVVVRVLAKAASTCMSLVL 214
            LR R+ ++    +A  +C+S VL
Sbjct: 189 SLRCRTNLLSAFGRAGFSCVSPVL 203

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BLAST of CsaV3_5G025880 vs. NCBI nr
Match: XP_018507751.1 (PREDICTED: uncharacterized protein LOC108868656 [Pyrus x bretschneideri])

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-10
Identity = 66/207 (31.88%), Postives = 95/207 (45.89%), Query Frame = 0


Query: 19  DEDTLSFRDFPILEPQSEAGD----SCSDHDDRQDFFEFRTDLKRKTSSLLPPSEIVFCG 78
           +ED LS  D P+ +   E+ +    S S      D FEFR D  R+      P ++VFCG
Sbjct: 13  EEDALSLCDLPLHDDTGESEENPIISASYSSAPDDLFEFRIDPIRR----YIPVDVVFCG 72

Query: 79  RTLDIFRDEDSASSRNRSESSLIRNQSFRYGNGSRPFSSSAVGG---------LFEIQRS 138
           + +     E    +   S     R++S ++ + S P+S  + G              Q S
Sbjct: 73  KPIPPRTQEPLFENPLFS-----RSESLKFSSPSHPYSHRSPGSELVRAFGSCRLHQQSS 132

Query: 139 NSRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSVVTADGYESGISPW 198
           NSR+    IGL K    ++++EIRKRQ+R AP PMF V       SV       SG   W
Sbjct: 133 NSRKHKVFIGLVKYQPEMDMNEIRKRQSRRAPAPMFPVKSGGEQPSVACGRS-GSGKGHW 192

Query: 199 RLIKPLRYRSVVVRVLAKAASTCMSLV 213
            L++PLR R  ++  LAK    C+  V
Sbjct: 193 GLMRPLRCRFHLLGALAKVTHGCVPRV 209

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BLAST of CsaV3_5G025880 vs. TrEMBL
Match: tr|A0A0A0KNN4|A0A0A0KNN4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G494420 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 4.7e-112
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MESVKYNPDLLDVLDVQDDEDTLSFRDFPILEPQSEAGDSCSDHDDRQDFFEFRTDLKRK 60
           MESVKYNPDLLDVLDVQDDEDTLSFRDFPILEPQSEAGDSCSDHDDRQDFFEFRTDLKRK
Sbjct: 1   MESVKYNPDLLDVLDVQDDEDTLSFRDFPILEPQSEAGDSCSDHDDRQDFFEFRTDLKRK 60

Query: 61  TSSLLPPSEIVFCGRTLDIFRDEDSASSRNRSESSLIRNQSFRYGNGSRPFSSSAVGGLF 120
           TSSLLPPSEIVFCGRTLDIFRDEDSASSRNRSESSLIRNQSFRYGNGSRPFSSSAVGGLF
Sbjct: 61  TSSLLPPSEIVFCGRTLDIFRDEDSASSRNRSESSLIRNQSFRYGNGSRPFSSSAVGGLF 120

Query: 121 EIQRSNSRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSVVTADGYES 180
           EIQRSNSRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSVVTADGYES
Sbjct: 121 EIQRSNSRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSVVTADGYES 180

Query: 181 GISPWRLIKPLRYRSVVVRVLAKAASTCMSLV 213
           GISPWRLIKPLRYRSVVVRVLAKAASTCMSLV
Sbjct: 181 GISPWRLIKPLRYRSVVVRVLAKAASTCMSLV 212

[Close]

BLAST of CsaV3_5G025880 vs. TrEMBL
Match: tr|A0A1Q3BZU5|A0A1Q3BZU5_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_16972 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.3e-13
Identity = 70/206 (33.98%), Postives = 99/206 (48.06%), Query Frame = 0


Query: 9   DLLDVLDVQDDEDTLSFRDFPI--LEPQSEAGDSCSDHDDRQDFFEFRTDLKRKTSSLLP 68
           D  ++ D++D EDTLS  D PI   EP  E   S S+    Q+ FEF  D   + +  L 
Sbjct: 3   DTTNLHDLEDFEDTLSLSDLPIHNQEPYPEYQSSPSN----QELFEFSIDTNPEAN--LK 62

Query: 69  PSEIVFCGRTLDIFRDEDSASSRNRSESSLIRNQSFRYGNGSRPFSSSAVGGLFEIQRSN 128
              I+FCG+ +   R+E +    + S S  +   +++                      N
Sbjct: 63  VDNIIFCGKIIP-QRNEPTNHINDHSSSLHVVTSNYK---------------PHRYHSCN 122

Query: 129 SRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSVVTADGYESGISPWR 188
           S +   LIG  K P  ++LS+I+KRQ R APTPMF VV  E    VV       G   W 
Sbjct: 123 SNKHKFLIGSAKVPWEMQLSDIKKRQKRRAPTPMFPVVTTER--EVVNGHREAVGSGCWG 182

Query: 189 LIKPLRYRSVVVRVLAKAASTCMSLV 213
           L++PL++RS +VR LAKA   C+  V
Sbjct: 183 LLRPLKFRSNIVRALAKAYLGCIPRV 184

[Close]

BLAST of CsaV3_5G025880 vs. TrEMBL
Match: tr|A0A2N9EIE3|A0A2N9EIE3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6598 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.9e-13
Identity = 73/226 (32.30%), Postives = 101/226 (44.69%), Query Frame = 0


Query: 1   MESVKYNPDLLDVLDVQDDEDTLSFRDFPI--LEPQSEAGDSCSDHDDRQDFFEFRTDLK 60
           ME  KY  DL      + +EDTLS  D  I   EP S +     +     D FEF    K
Sbjct: 1   MEDNKYLQDL-----EESEEDTLSLCDLLIDDQEPDSYSPKYFPNSPSHPDMFEFS---K 60

Query: 61  RKTSSLLPPSEIVFCGRTLDIFRDEDSAS------SRNRSESSLIRNQSFRYGNGSR--- 120
              +   P   ++FCGR +     +D +       SR+ S +   +  S R+   +R   
Sbjct: 61  NPINPTNPKDTMIFCGRVIHQKNQQDQSHRQALFLSRSESFNKSQKFHSARFTGNARSNS 120

Query: 121 ---PFSSSAVGGLFEIQRSNSRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPK 180
              P  + A G      +S+S++   LIGL K    ++L+EIRKRQ R AP PMF VV  
Sbjct: 121 LRVPTPAPATGSSRYYHKSDSKKHKVLIGLAKIQPEMDLNEIRKRQGRRAPVPMFPVVDG 180

Query: 181 ETTVSVVTADGYESGISPWRLIKPLRYRSVVVRVLAKAASTCMSLV 213
              V         +G S W L++PLR R      LA+AA  C  L+
Sbjct: 181 GEPVVAGGGKSGGTGKSHWGLLRPLRCRGHATNALARAAFGCFPLL 218

[Close]

BLAST of CsaV3_5G025880 vs. TrEMBL
Match: tr|A0A2P4IGF3|A0A2P4IGF3_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_36692 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12
Identity = 69/214 (32.24%), Postives = 96/214 (44.86%), Query Frame = 0


Query: 19  DEDTLSFRDFPILEPQSEAGD-----SCSDHDDRQDFFEFRTDLKRKTSSLLPPSEIVFC 78
           +ED LS  D  I +  +E  +     S SD   R D FEF T      +  +    ++FC
Sbjct: 14  EEDALSLCDLSINDVNAELEEPNSFSSYSDSPSRPDLFEFST-----ANPTIKNDTVIFC 73

Query: 79  GRTLDIFRDEDSASSRNR-----SESSLIRNQSF---RYGNGSRPFSSSA-VGGLFEIQR 138
           GR +             R        S  ++Q F   R+   +R  S      G F  Q+
Sbjct: 74  GRVIHQKHXXXXXXXXPRRRALWGSESFNKSQKFHSARFTGNTRSSSLRVPATGSFRYQK 133

Query: 139 SNSRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSVVTADGYES---- 198
             S++   +IGL K   ++ELSEIRKRQAR  P PM  VV   T   +   DG +     
Sbjct: 134 CESKKHKVIIGLAKIQPQMELSEIRKRQARRGPVPMIPVVVDGTEPLIAGGDGGKKSGGN 193

Query: 199 --GISPWRLIKPLRYRSVVVRVLAKAASTCMSLV 213
               SPW L++PLR R+    VLA+A+S C  L+
Sbjct: 194 GPAKSPWALLRPLRCRAHFASVLARASSACFPLL 222

[Close]

BLAST of CsaV3_5G025880 vs. TrEMBL
Match: tr|F6HNI5|F6HNI5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0019g03930 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 4.7e-11
Identity = 65/204 (31.86%), Postives = 99/204 (48.53%), Query Frame = 0


Query: 15  DVQDDEDTLSFRDFPILEPQSEAGDSCSDHDDRQDFFEFRTDLKRKTSSLLPPSEIVFCG 74
           D +D ED LSF D PI   QS       D      FFEF ++    +   LPP+      
Sbjct: 9   DFEDSEDALSFCDLPIDTLQSHDSHHHPDPSPDDHFFEFLSEPIIISGRTLPPTN--HPS 68

Query: 75  RTLDIFRDED-SASSRNRSESSLIRNQSFRYGNGSRPFSSS----AVGGLFEIQRSNSRR 134
             L  +R E  SA++ +RS +S++R++S R    S P  SS       G+     + S++
Sbjct: 69  VDLATWRSESFSAATPSRSRTSVVRSESLRL---SVPKGSSQNQPGFSGMRVTPAARSKK 128

Query: 135 PMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSVVTADGYESGISPWRLIK 194
              + GL K P  +ELS++R+RQ+R AP P+  V           A G  +G   W L++
Sbjct: 129 HAFMFGLPKFPLEMELSDMRRRQSRRAPAPIIPVAEARE----AAAGGKSAGKGQWGLLR 188

Query: 195 PLRYRSVVVRVLAKAASTCMSLVL 214
            LR R+ ++    +A  +C+S VL
Sbjct: 189 SLRCRTNLLSAFGRAGFSCVSPVL 203

The following BLAST results are available for this feature:

BLAST of CsaV3_5G025880 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN51223.1	7.1e-112	100.00	hypothetical protein Csa_5G494420 [Cucumis sativus]	[more]
GAV73487.1	3.4e-13	33.98	hypothetical protein CFOL_v3_16972 [Cephalotus follicularis]	[more]
XP_023887327.1	1.7e-12	32.24	uncharacterized protein LOC111999433 [Quercus suber] >POE67526.1 hypothetical pr...	[more]
XP_010658647.1	7.1e-11	31.86	PREDICTED: uncharacterized protein LOC104881153 [Vitis vinifera]	[more]
XP_018507751.1	1.2e-10	31.88	PREDICTED: uncharacterized protein LOC108868656 [Pyrus x bretschneideri]	[more]

BLAST of CsaV3_5G025880 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsaV3_5G025880 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_5G025880 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KNN4\|A0A0A0KNN4_CUCSA	4.7e-112	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G494420 PE=4 SV=1	[more]
tr\|A0A1Q3BZU5\|A0A1Q3BZU5_CEPFO	2.3e-13	33.98	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_16972 PE=4...	[more]
tr\|A0A2N9EIE3\|A0A2N9EIE3_FAGSY	2.9e-13	32.30	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6598 PE=4 SV=1	[more]
tr\|A0A2P4IGF3\|A0A2P4IGF3_QUESU	1.1e-12	32.24	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_36692 PE=4 SV=1	[more]
tr\|F6HNI5\|F6HNI5_VITVI	4.7e-11	31.86	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0019g03930 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G025880.1	CsaV3_5G025880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34130	FAMILY NOT NAMED	coord: 16..206

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G025880	CSPI05G16870	Wild cucumber (PI 183967)	cpicucB284
CsaV3_5G025880	Cucsa.275650	Cucumber (Gy14) v1	cgycucB422
CsaV3_5G025880	CmaCh04G025950	Cucurbita maxima (Rimu)	cmacucB0862
CsaV3_5G025880	CmoCh04G027160	Cucurbita moschata (Rifu)	cmocucB0848
CsaV3_5G025880	Cp4.1LG01g24240	Cucurbita pepo (Zucchini)	cpecucB0519
CsaV3_5G025880	CsGy5G016600	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G025880	Cla004733	Watermelon (97103) v1	cucwmB387
CsaV3_5G025880	MELO3C002880	Melon (DHL92) v3.5.1	cucmeB359
CsaV3_5G025880	ClCG09G020520	Watermelon (Charleston Gray)	cucwcgB362
CsaV3_5G025880	Lsi02G017060	Bottle gourd (USVL1VR-Ls)	cuclsiB370
CsaV3_5G025880	MELO3C002880.2	Melon (DHL92) v3.6.1	cucmedB351
CsaV3_5G025880	Cla97C09G181940	Watermelon (97103) v2	cucwmbB424
CsaV3_5G025880	Bhi06G000573	Wax gourd	cucwgoB475

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G025880	Silver-seed gourd	carcucB0297
CsaV3_5G025880	Silver-seed gourd	carcucB0724
CsaV3_5G025880	Cucurbita maxima (Rimu)	cmacucB0354
CsaV3_5G025880	Cucurbita maxima (Rimu)	cmacucB0892
CsaV3_5G025880	Cucurbita moschata (Rifu)	cmocucB0349
CsaV3_5G025880	Cucurbita pepo (Zucchini)	cpecucB0211
CsaV3_5G025880	Cucurbita pepo (Zucchini)	cpecucB0550