CSPI05G16870 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCCGTATTGAAAATCTTGGCATACACGCTTAAGCTAAAAAAACACCGTATTATAATTCATGGTGGATCAAATCCAATCTTCACCCTTCCAGAAGTTCTCCAAAGGAAGCATCCTCCTTCTTTCCTCTTTCTCCCTTTATTTAATCCACCAATTCCATCTTCATCTTCATTTCACCGCAATTTTCTTTTTCTAAAACCATTCTTTCTGCTTCGATGGAGTCAGTGAAGTATAATCCAGATTTGTTGGACGTCCTTGACGTTCAAGACGACGAAGACACTCTCTCTTTCCGTGATTTTCCAATTCTCGAACCACAATCGGAAGCCGGGGATTCCTGCAGTGATCACGACGATCGCCAAGATTTCTTCGAATTTCGCACCGATTTGAAGCGGAAAACAAGTTCATTGTTGCCTCCAAGTGAAATCATTTTCTGCGGGAGGACTTTGGACATATTCCGAGATGAAGACTCTGCAAGTTCTAGAAATAGATCGGAATCATCGTTGATTCGAAACCAGAGCTTTCGGTATGGAAATGGATCGAGACCGTTTTCTTCGTCTGCAGTGGGCGGATTATTTGAAATTCAACGGAGTAATTCGAGGAGGCCGACGGCGTTGATAGGATTAACAAAAACTCCGTCGAGAATAGAGTTGAGTGAGATTCGGAAGAGACAGGCTCGGTTAGCACCGACCCCGATGTTCCACGTGGTTCCGAAGGAGACGACGGTAAGTGTTGTCACCGCGGATGGGTACGAGAGCGGAATCAGCCCGTGGAGGTTGATTAAGCCTCTCAGGTATAGATCTGTTGTGGTTAGAGTATTGGCTAAGGCAGCTTCGACTTGTATGAGTCTTGTGTGAGTGAGGGATGGGTTGATGACGTTATTGTTTCGCTTTCTACATTTGCTTCATTGTAACCATTATTCTTCACATTTTTTTAATTCTTTAATTTTCGGTTTTTGTATAAACTTTAGCTTCCCACC ATGGAGTCAGTGAAGTATAATCCAGATTTGTTGGACGTCCTTGACGTTCAAGACGACGAAGACACTCTCTCTTTCCGTGATTTTCCAATTCTCGAACCACAATCGGAAGCCGGGGATTCCTGCAGTGATCACGACGATCGCCAAGATTTCTTCGAATTTCGCACCGATTTGAAGCGGAAAACAAGTTCATTGTTGCCTCCAAGTGAAATCATTTTCTGCGGGAGGACTTTGGACATATTCCGAGATGAAGACTCTGCAAGTTCTAGAAATAGATCGGAATCATCGTTGATTCGAAACCAGAGCTTTCGGTATGGAAATGGATCGAGACCGTTTTCTTCGTCTGCAGTGGGCGGATTATTTGAAATTCAACGGAGTAATTCGAGGAGGCCGACGGCGTTGATAGGATTAACAAAAACTCCGTCGAGAATAGAGTTGAGTGAGATTCGGAAGAGACAGGCTCGGTTAGCACCGACCCCGATGTTCCACGTGGTTCCGAAGGAGACGACGGTAAGTGTTGTCACCGCGGATGGGTACGAGAGCGGAATCAGCCCGTGGAGGTTGATTAAGCCTCTCAGGTATAGATCTGTTGTGGTTAGAGTATTGGCTAAGGCAGCTTCGACTTGTATGAGTCTTGTGTGA ATGGAGTCAGTGAAGTATAATCCAGATTTGTTGGACGTCCTTGACGTTCAAGACGACGAAGACACTCTCTCTTTCCGTGATTTTCCAATTCTCGAACCACAATCGGAAGCCGGGGATTCCTGCAGTGATCACGACGATCGCCAAGATTTCTTCGAATTTCGCACCGATTTGAAGCGGAAAACAAGTTCATTGTTGCCTCCAAGTGAAATCATTTTCTGCGGGAGGACTTTGGACATATTCCGAGATGAAGACTCTGCAAGTTCTAGAAATAGATCGGAATCATCGTTGATTCGAAACCAGAGCTTTCGGTATGGAAATGGATCGAGACCGTTTTCTTCGTCTGCAGTGGGCGGATTATTTGAAATTCAACGGAGTAATTCGAGGAGGCCGACGGCGTTGATAGGATTAACAAAAACTCCGTCGAGAATAGAGTTGAGTGAGATTCGGAAGAGACAGGCTCGGTTAGCACCGACCCCGATGTTCCACGTGGTTCCGAAGGAGACGACGGTAAGTGTTGTCACCGCGGATGGGTACGAGAGCGGAATCAGCCCGTGGAGGTTGATTAAGCCTCTCAGGTATAGATCTGTTGTGGTTAGAGTATTGGCTAAGGCAGCTTCGACTTGTATGAGTCTTGTGTGA
BLAST of CSPI05G16870 vs. TrEMBL
Match: A0A0A0KNN4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G494420 PE=4 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 8.9e-112 Identity = 210/212 (99.06%), Postives = 211/212 (99.53%), Query Frame = 1
BLAST of CSPI05G16870 vs. TrEMBL
Match: F6HNI5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g03930 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.3e-11 Identity = 64/203 (31.53%), Postives = 98/203 (48.28%), Query Frame = 1
BLAST of CSPI05G16870 vs. TrEMBL
Match: M5X0J2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011401mg PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.8e-11 Identity = 68/202 (33.66%), Postives = 96/202 (47.52%), Query Frame = 1
BLAST of CSPI05G16870 vs. TrEMBL
Match: B9SUQ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0714630 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.2e-09 Identity = 62/208 (29.81%), Postives = 95/208 (45.67%), Query Frame = 1
BLAST of CSPI05G16870 vs. TrEMBL
Match: W9RL04_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013438 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.2e-09 Identity = 70/244 (28.69%), Postives = 104/244 (42.62%), Query Frame = 1
BLAST of CSPI05G16870 vs. NCBI nr
Match: gi|700196046|gb|KGN51223.1| (hypothetical protein Csa_5G494420 [Cucumis sativus]) HSP 1 Score: 411.0 bits (1055), Expect = 1.3e-111 Identity = 210/212 (99.06%), Postives = 211/212 (99.53%), Query Frame = 1
BLAST of CSPI05G16870 vs. NCBI nr
Match: gi|731413231|ref|XP_010658647.1| (PREDICTED: uncharacterized protein LOC104881153 [Vitis vinifera]) HSP 1 Score: 77.4 bits (189), Expect = 3.3e-11 Identity = 64/203 (31.53%), Postives = 98/203 (48.28%), Query Frame = 1
BLAST of CSPI05G16870 vs. NCBI nr
Match: gi|596005850|ref|XP_007218398.1| (hypothetical protein PRUPE_ppa011401mg [Prunus persica]) HSP 1 Score: 75.9 bits (185), Expect = 9.7e-11 Identity = 68/202 (33.66%), Postives = 96/202 (47.52%), Query Frame = 1
BLAST of CSPI05G16870 vs. NCBI nr
Match: gi|703110638|ref|XP_010099645.1| (hypothetical protein L484_013438 [Morus notabilis]) HSP 1 Score: 70.9 bits (172), Expect = 3.1e-09 Identity = 70/244 (28.69%), Postives = 104/244 (42.62%), Query Frame = 1
BLAST of CSPI05G16870 vs. NCBI nr
Match: gi|223530822|gb|EEF32686.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 70.9 bits (172), Expect = 3.1e-09 Identity = 62/208 (29.81%), Postives = 95/208 (45.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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