CmoCh04G027160 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G027160
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr04 : 19714007 .. 19716519 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCTGTGGAGAACAATTTGGAAGTTTTGGATCTGATTGACGACGATGCAGACGATCTCTCTTTACGCGATTTTCCGATTCACGAACAAGATGATGTGGATCCGCCATGTCGCTCTCCGTCCTACCACGATCTGTTTGAATTCTGCACCGATTTGAAGCAGAGAACAAGTTCCTCATCGCCGCCTAGTGAAATCGTCTTCTGCGGGAAGATATTGGACGCTGGAACTCTATCTCTCCGAGATAAAGATTCTGATGCGGAAGGGCGGAGTTTCCGGAGTAACTCGGAGTCGTTTATGCGAAACCAGAGCTTTCGGTCGAAATCGTTTTCGTCGCCTGTAATCGGTAGTTTCGGATATCAGCGGAGTAGTTTGAGGAGGCCGATGGCGTTGATAGGATTAACGAGAACTCCGTCGAGAACAGAACTGAGCGAGATTCGGAGGAGACAGGCTCGGCTGGCACCGGCGCCGATGTTCCGCGTGGTTCCGGGGGAGGCGGCGGCAACTGTTGCCGCCGACGGTACCGGCGGAGAAATGAGTCCATGGAGCCTGATTAGGGCTCTCAGGTATAGGTCGGTTCTGGTTAGAGTGTTGGCTAAGGCGGCTTCTAGTTGTATAGCTCGTGCGTGAGTGAGTCCTGGCTGCTTGGCTTTTCCGATTCATGGTGTTTAGCTTGGTTTCCCTTCTTTACATTTTTGTAATTATTATTTTATTTCTTATATTTTTGTATAAATTATAGTATTTCATTTGAGTGCATTTTAGATATTTTACACTCAAATTGATTTATAACTCTAAATTATCTCGATGATATAGAAACAATAAGATGTTATCTAGAAGATTTTTTTACATTAGTTTTGGATGAAAATTGATTTTAAGAAGAATATTTGAATAATTTTTTAACTTTTAATATTGTTTAAAAAGTATCAAATTTAATTAATAGGCTTTGACTTTAAAAAAAAAAAAATATTAACAGTCCTTACTTAAAAAAAACTGTTAAAAAAATTGGTCGTTGTATATATATATATATATTAAAAGTTAAATTTTGTTTTTTTTTTTAATTTTTAATTTTTAAAGAAAAAGTAAAAGTATTTAAAATTGGTAAGTGTATTTTTTTTATTTTTTAAAAAAGTTAAAATTTGTTTTATTTTATTTTTTTTTTAAAGAATTAAAAGTATTTTTAATTTTTGTTTTTTTAAGTTTAAGGGTTTTAACTAAAGTTTTGAAAAATAAAAAATATTTTTTATTAAAAGGAAAATTTTGAAACCATTTTGAAAGTTTATTTCTATTTTTTAAATAAAATATTAACGTTTTTTTTTTCAAAATTAATATTAAAATAGTTTTTTAATTTTGTTTTAAAGTTTAAAAATATTGTAGATTTTTTTTAAAGTTTAGGATATTATTTAAAATTTAAAAAATTCACGATATTTTTGCAATAAAATGTAAAATTAAAAATTATTTTCATTAATTTAGTCTTTAAAGAATATTCGTTTTAAAAAACTCTTTATTGGATAATTTCAATTTTGAATATAATTTCTATTATAAAATTCAAAATATCATACTAAATCTAATAACAATTTATAAACAATAATATTATATTAATTTATAAACAATATAAATTATATAAAACTGTTTTTTAAATATGTATTAAAATTCGAGAACAACAAATGTCTAACTTAACCACATTGACAGTTGGAACTTCATTAGTAGTTCGGTAACAAAAACTATGGAGGGCTGTAGCTCGATCCAAATTTATATATTTATTCCTATAAAATTAAATGAAATTTTTTATAAAAAATTAAAATGAAAATCAACCAGTCTTCTAATTTTTTAATTGGTGGTATATATTTATATTAATTAGAAAATGGAATTAAAATTAAATTGAGTTCTCTAAAACTATAAATTTTGTCTCGTGTAGAGTAAAAATTAAAATAATATTATTTATTAAAATTCAATTTCGCCTTATAATTTGAAAAAGAAAAAAAAAAAAAAAAGAATCAGTTTAAGAGACCAAATTCCCCTTTGGAATCCAAGGTCCGGTTTTTGAGAGCAACAGACTGTTCATATCGAACTAGCGTCTTCTTCTTCTTCCTCGAATCCGTAGGTAATTCTCAAAACACTTTTAACTCTTCTCTCATCCAGAGCCTTGAACTTGGCTATTCCATGTTTTATTGAATGCCTTTGAACACGACTTCCAAATCTCTTGTTCTAATGTATGGATTTCTATGGATTATTGGACACTGGAAAAGCTAGGATCAATCCATGTGGAACGTATTGCGTTTTTATTATACTCTTGATAGAAGTTAGATTACGTAGAAGTAGAGTAGCTCACCATTGAACTTGGGGGAAATTTGCATTGTTTTTTGGAGAAAAATTAGTGCTACGGTAATGCAATAAGAAAATCCAGGTTGTTCTTTACTTTATAATCAATTGCTTCATCCTGTCTCATCAATTGCATGATTTTCTTGCTTGATTTCATATTTATAGTTTGTGATGATTCTTATTCAGTTGCTTAA

mRNA sequence

ATGGCGTCTGTGGAGAACAATTTGGAAGTTTTGGATCTGATTGACGACGATGCAGACGATCTCTCTTTACGCGATTTTCCGATTCACGAACAAGATGATGTGGATCCGCCATGTCGCTCTCCGTCCTACCACGATCTGTTTGAATTCTGCACCGATTTGAAGCAGAGAACAAGTTCCTCATCGCCGCCTAGTGAAATCGTCTTCTGCGGGAAGATATTGGACGCTGGAACTCTATCTCTCCGAGATAAAGATTCTGATGCGGAAGGGCGGAGTTTCCGGAGTAACTCGGAGTCGTTTATGCGAAACCAGAGCTTTCGGTCGAAATCGTTTTCGTCGCCTGTAATCGGTAGTTTCGGATATCAGCGGAGTAGTTTGAGGAGGCCGATGGCGTTGATAGGATTAACGAGAACTCCGTCGAGAACAGAACTGAGCGAGATTCGGAGGAGACAGGCTCGGCTGGCACCGGCGCCGATGTTCCGCGTGGTTCCGGGGGAGGCGGCGGCAACTGTTGCCGCCGACGGTACCGGCGGAGAAATGAGTCCATGGAGCCTGATTAGGGCTCTCAGGTATAGGTCGGTTCTGGTTAGAGTGTTGGCTAAGGCGGCTTCTAGTTGTATAGCTCGTGCCGTCTTCTTCTTCTTCCTCGAATCCGTAGTTTGTGATGATTCTTATTCAGTTGCTTAA

Coding sequence (CDS)

ATGGCGTCTGTGGAGAACAATTTGGAAGTTTTGGATCTGATTGACGACGATGCAGACGATCTCTCTTTACGCGATTTTCCGATTCACGAACAAGATGATGTGGATCCGCCATGTCGCTCTCCGTCCTACCACGATCTGTTTGAATTCTGCACCGATTTGAAGCAGAGAACAAGTTCCTCATCGCCGCCTAGTGAAATCGTCTTCTGCGGGAAGATATTGGACGCTGGAACTCTATCTCTCCGAGATAAAGATTCTGATGCGGAAGGGCGGAGTTTCCGGAGTAACTCGGAGTCGTTTATGCGAAACCAGAGCTTTCGGTCGAAATCGTTTTCGTCGCCTGTAATCGGTAGTTTCGGATATCAGCGGAGTAGTTTGAGGAGGCCGATGGCGTTGATAGGATTAACGAGAACTCCGTCGAGAACAGAACTGAGCGAGATTCGGAGGAGACAGGCTCGGCTGGCACCGGCGCCGATGTTCCGCGTGGTTCCGGGGGAGGCGGCGGCAACTGTTGCCGCCGACGGTACCGGCGGAGAAATGAGTCCATGGAGCCTGATTAGGGCTCTCAGGTATAGGTCGGTTCTGGTTAGAGTGTTGGCTAAGGCGGCTTCTAGTTGTATAGCTCGTGCCGTCTTCTTCTTCTTCCTCGAATCCGTAGTTTGTGATGATTCTTATTCAGTTGCTTAA

Homology

[Close]

BLAST of CmoCh04G027160 vs. TrEMBL
Match: A0A0A0KNN4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G494420 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.0e-44
Identity = 125/218 (57.34%), Postives = 149/218 (68.35%), Query Frame = 1


Query: 1   MASVENNLEVLDLID--DDADDLSLRDFPIHE-QDDVDPPCRS-PSYHDLFEFCTDLKQR 60
           M SV+ N ++LD++D  DD D LS RDFPI E Q +    C       D FEF TDLK++
Sbjct: 1   MESVKYNPDLLDVLDVQDDEDTLSFRDFPILEPQSEAGDSCSDHDDRQDFFEFRTDLKRK 60

Query: 61  TSSSSPPSEIVFCGKILDAGTLSLRDKDSDAEGRSFRSNSES-FMRNQSFR----SKSFS 120
           TSS  PPSEIVFCG+ LD      RD+DS     S R+ SES  +RNQSFR    S+ FS
Sbjct: 61  TSSLLPPSEIVFCGRTLDI----FRDEDS----ASSRNRSESSLIRNQSFRYGNGSRPFS 120

Query: 121 SPVIGS-FGYQRSSLRRPMALIGLTRTPSRTELSEIRRRQARLAPAPMFRVVPGE-AAAT 180
           S  +G  F  QRS+ RRPMALIGLT+TPSR ELSEIR+RQARLAP PMF VVP E   + 
Sbjct: 121 SSAVGGLFEIQRSNSRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSV 180

Query: 181 VAADGTGGEMSPWSLIRALRYRSVLVRVLAKAASSCIA 208
           V ADG    +SPW LI+ LRYRSV+VRVLAKAAS+C++
Sbjct: 181 VTADGYESGISPWRLIKPLRYRSVVVRVLAKAASTCMS 210

[Close]

BLAST of CmoCh04G027160 vs. TrEMBL
Match: M5X0J2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011401mg PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.8e-14
Identity = 74/200 (37.00%), Postives = 104/200 (52.00%), Query Frame = 1


Query: 17  DADDLSLRDFPIHEQDD--VDPPCRSPSYH--DLFEFCTDLKQRTSSSSPPSEIVFCGK- 76
           + D LSL D  +++  D  V+ P  SPS    D FEFC D          P ++VFCGK 
Sbjct: 14  EEDALSLCDLLLNDDGDESVEIPKASPSSDPADFFEFCVD----PICGYLPMDVVFCGKS 73

Query: 77  ILDAGTLSLRDKDSDAEGRS-FRSNSESFMRNQSFRSKSFSS--PVIGSFGYQRSSLRRP 136
           IL +  ++L   +S+ + ++ F S SES   +Q+  S + S   P  G      S+ R+ 
Sbjct: 74  ILCSKPITLPTPESEPQIKNPFFSRSESLRFSQASASPARSDLVPTTGKCRSPSSNSRKH 133

Query: 137 MALIGLTRTPSRTELSEIRRRQARLAPAPMFRVVPGEAAATVAADGTGGEMSPWSLIRAL 196
             LIGL +     +LSEIR+RQ+R APAPMF V+ G   + V    +G     W L+R L
Sbjct: 134 KVLIGLVKYQPEMDLSEIRKRQSRRAPAPMFPVINGGEQSAVTGGKSGSGKGHWGLMRPL 193

Query: 197 RYRSVLVRVLAKAASSCIAR 209
           R  S L+  LAKA   C+ R
Sbjct: 194 RCPSHLLSALAKATLGCVPR 209

[Close]

BLAST of CmoCh04G027160 vs. TrEMBL
Match: A0A061FUT8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_043094 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.5e-11
Identity = 75/211 (35.55%), Postives = 100/211 (47.39%), Query Frame = 1


Query: 21  LSLRDFPIHEQDDVDP----PCRSPSYHDLFEFCTDLKQRTSSSSPPSEIVFCGKI---- 80
           LSL D P+  Q  +DP    P  SPS H+LFEF   L    + S+   +IVFCGK+    
Sbjct: 39  LSLCDLPLENQV-LDPFDHHPPTSPS-HELFEFPFTLN---TFSNNKDDIVFCGKLIKEQ 98

Query: 81  --------------LDAGTLSLRDKDSDAEGRSFRSNSESFMRNQSFRSKSFSSPVIGSF 140
                         L +  L   DK         +S   S +  + F+S+S SS      
Sbjct: 99  DFDDLDDQSRYLFPLSSARLLNSDKKDLGSLCLAKSKPNSALSTKFFKSQSCSSS----- 158

Query: 141 GYQRSSLRRPMALIGLTRTPSRTELSEIRRRQARLAPAPMF-RVVPGEAAATVAADGTGG 200
               SS R+   LIGL + P + ELS+I++RQ+R  P+PMF  V  G+     A DG GG
Sbjct: 159 ----SSSRKHKVLIGLAKIPPKMELSDIKKRQSRRNPSPMFPPVAAGDLEVVAAGDGCGG 218

Query: 201 EM--SPWSLIRALRYRSVLVRVLAKAASSCI 207
                 W L+R LR R+ L   LAKA+  CI
Sbjct: 219 RRRGHHWGLLRPLRCRANLATALAKASLGCI 235

[Close]

BLAST of CmoCh04G027160 vs. TrEMBL
Match: B9SUQ0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0714620 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.7e-10
Identity = 71/207 (34.30%), Postives = 102/207 (49.28%), Query Frame = 1


Query: 4   VENNLEVLDLIDDDADDLSLRDFPIHEQDDV--DPPCRSPSYHDLFEFCTDLKQRTSSSS 63
           +ENN    + I++  D LSL DF + +Q+     P   S    D FEF T      S+S+
Sbjct: 1   MENN----NSIEEFEDALSLCDFALCDQESSIEHPDSPSSQEEDFFEFSTSSTSSVSNST 60

Query: 64  PPSEIVFCGKILDAGTLSLRDKDSDAEGRSFRSNSESFM---RNQSFRSKSFSSPVIGSF 123
             + I+FCGKI+   T +  D D         S+S S     RN+     S S P +   
Sbjct: 61  ADN-IIFCGKIISCKTEN-DDNDQRYNNPLCFSSSPSLRMVNRNKITSKNSSSKPALPPP 120

Query: 124 GYQRSSLRRPMALIGLTRTPSRTELSEIRRRQAR--LAPAPMFRVVPGEAAATVAADGTG 183
             + SS ++   +IGLTR PS+ ELS++R RQ R    P PMF  V G  AA V+  G+ 
Sbjct: 121 A-RSSSSKKHKVIIGLTRIPSKMELSDLRERQNRKLQTPPPMFPAVVGSEAAAVSGGGSS 180

Query: 184 GEMSPWSLIRALRYRSVLVRVLAKAAS 204
                WSL+R  +Y   +V  L +++S
Sbjct: 181 KRSRNWSLLRRAQY---MVSTLTRSSS 197

[Close]

BLAST of CmoCh04G027160 vs. TrEMBL
Match: A0A059BGZ2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02810 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.7e-10
Identity = 73/208 (35.10%), Postives = 99/208 (47.60%), Query Frame = 1


Query: 16  DDADDLSLRDFPIH---EQDDVDPPCRSPSYHDLFEFCTDLKQRTSSSSPPSEIVFCGKI 75
           D+ D LS  D P+    +Q    PP  SP   D  +F  +      ++S     +FCG+ 
Sbjct: 14  DEDDALSFCDLPLTTSLDQPRDGPP--SPPLWDAPDF--EFSAGPPAASAVDAFLFCGRS 73

Query: 76  LDAGTLSLRDKDSDAEGRSFRSNSESF-------MRNQSFR---SKSFSSPVIGSFGYQR 135
           +          DS     SFR +           +R+ S R   S+S ++P   S     
Sbjct: 74  IPFDERERHRVDSFGRLDSFRRDGAKIRFAGGQLLRSNSLRMKRSRSSAAPAAASASAGS 133

Query: 136 SSLRRP-MALIGLTRTPSRTELSEIRRRQARLAPAPMFRVVPGEAAATVAADGTGGEMSP 195
           SS RR   ALIG+T+ P+R ELS+IR+RQ R APAP+F     E    V ADG+GG    
Sbjct: 134 SSFRRRHRALIGITKFPARMELSDIRKRQGRRAPAPLFPA--AEVGKQVVADGSGGG-GH 193

Query: 196 WSLIRALRYRSVLVRVLAKAASSCIARA 210
            SL+R LR RS     LA+A+  CI  A
Sbjct: 194 RSLLRPLRCRSHFANALARASLGCIPHA 214

[Close]

BLAST of CmoCh04G027160 vs. NCBI nr
Match: gi|700196046|gb|KGN51223.1| (hypothetical protein Csa_5G494420 [Cucumis sativus])

HSP 1 Score: 188.3 bits (477), Expect = 1.4e-44
Identity = 125/218 (57.34%), Postives = 149/218 (68.35%), Query Frame = 1


Query: 1   MASVENNLEVLDLID--DDADDLSLRDFPIHE-QDDVDPPCRS-PSYHDLFEFCTDLKQR 60
           M SV+ N ++LD++D  DD D LS RDFPI E Q +    C       D FEF TDLK++
Sbjct: 1   MESVKYNPDLLDVLDVQDDEDTLSFRDFPILEPQSEAGDSCSDHDDRQDFFEFRTDLKRK 60

Query: 61  TSSSSPPSEIVFCGKILDAGTLSLRDKDSDAEGRSFRSNSES-FMRNQSFR----SKSFS 120
           TSS  PPSEIVFCG+ LD      RD+DS     S R+ SES  +RNQSFR    S+ FS
Sbjct: 61  TSSLLPPSEIVFCGRTLDI----FRDEDS----ASSRNRSESSLIRNQSFRYGNGSRPFS 120

Query: 121 SPVIGS-FGYQRSSLRRPMALIGLTRTPSRTELSEIRRRQARLAPAPMFRVVPGE-AAAT 180
           S  +G  F  QRS+ RRPMALIGLT+TPSR ELSEIR+RQARLAP PMF VVP E   + 
Sbjct: 121 SSAVGGLFEIQRSNSRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSV 180

Query: 181 VAADGTGGEMSPWSLIRALRYRSVLVRVLAKAASSCIA 208
           V ADG    +SPW LI+ LRYRSV+VRVLAKAAS+C++
Sbjct: 181 VTADGYESGISPWRLIKPLRYRSVVVRVLAKAASTCMS 210

[Close]

BLAST of CmoCh04G027160 vs. NCBI nr
Match: gi|596005850|ref|XP_007218398.1| (hypothetical protein PRUPE_ppa011401mg [Prunus persica])

HSP 1 Score: 87.8 bits (216), Expect = 2.6e-14
Identity = 74/200 (37.00%), Postives = 104/200 (52.00%), Query Frame = 1


Query: 17  DADDLSLRDFPIHEQDD--VDPPCRSPSYH--DLFEFCTDLKQRTSSSSPPSEIVFCGK- 76
           + D LSL D  +++  D  V+ P  SPS    D FEFC D          P ++VFCGK 
Sbjct: 14  EEDALSLCDLLLNDDGDESVEIPKASPSSDPADFFEFCVD----PICGYLPMDVVFCGKS 73

Query: 77  ILDAGTLSLRDKDSDAEGRS-FRSNSESFMRNQSFRSKSFSS--PVIGSFGYQRSSLRRP 136
           IL +  ++L   +S+ + ++ F S SES   +Q+  S + S   P  G      S+ R+ 
Sbjct: 74  ILCSKPITLPTPESEPQIKNPFFSRSESLRFSQASASPARSDLVPTTGKCRSPSSNSRKH 133

Query: 137 MALIGLTRTPSRTELSEIRRRQARLAPAPMFRVVPGEAAATVAADGTGGEMSPWSLIRAL 196
             LIGL +     +LSEIR+RQ+R APAPMF V+ G   + V    +G     W L+R L
Sbjct: 134 KVLIGLVKYQPEMDLSEIRKRQSRRAPAPMFPVINGGEQSAVTGGKSGSGKGHWGLMRPL 193

Query: 197 RYRSVLVRVLAKAASSCIAR 209
           R  S L+  LAKA   C+ R
Sbjct: 194 RCPSHLLSALAKATLGCVPR 209

[Close]

BLAST of CmoCh04G027160 vs. NCBI nr
Match: gi|645255127|ref|XP_008233355.1| (PREDICTED: uncharacterized protein LOC103332396 [Prunus mume])

HSP 1 Score: 79.7 bits (195), Expect = 7.2e-12
Identity = 73/201 (36.32%), Postives = 99/201 (49.25%), Query Frame = 1


Query: 17  DADDLSLRDFPIHEQDD--VDPPCRSPSYH--DLFEFCTDLKQRTSSSSPPSEIVFCGK- 76
           + D LSL D  + +  D  V+ P  SPS    D FEFC D          P ++VFCGK 
Sbjct: 15  EEDALSLCDLLLDDDGDESVETPKASPSSDPADFFEFCVD----PICGYLPMDVVFCGKS 74

Query: 77  ILDAGTLSLRDKDSDAEGRSFRSNSESFMRNQSFRSKSFSSPV--IGSFGYQRSSLRRPM 136
           IL +  ++L   +   +   F S SES   +Q+  S + S PV   G      S+ R+  
Sbjct: 75  ILCSKPITLPTPEPQIKNPFF-SRSESLRFSQASASPARSDPVPATGKCRSPSSNSRKHK 134

Query: 137 ALIGLTRTPSRTELSEIRRRQARLAPAPMFRVVPGEAAATVAADGTGGEMSPWS--LIRA 196
            LIGL +     +LSEIR+RQ+R APAPMF V+ G   + V     G     W   ++R 
Sbjct: 135 VLIGLVKYQPEMDLSEIRKRQSRRAPAPMFPVINGGEQSAVVGGKRGSGKGHWGPRMMRQ 194

Query: 197 LRYRSVLVRVLAKAASSCIAR 209
           LR  S L+  LAKA   C+ R
Sbjct: 195 LRCPSHLLSALAKATLGCVPR 210

[Close]

BLAST of CmoCh04G027160 vs. NCBI nr
Match: gi|590564785|ref|XP_007009764.1| (Uncharacterized protein TCM_043094 [Theobroma cacao])

HSP 1 Score: 78.2 bits (191), Expect = 2.1e-11
Identity = 75/211 (35.55%), Postives = 100/211 (47.39%), Query Frame = 1


Query: 21  LSLRDFPIHEQDDVDP----PCRSPSYHDLFEFCTDLKQRTSSSSPPSEIVFCGKI---- 80
           LSL D P+  Q  +DP    P  SPS H+LFEF   L    + S+   +IVFCGK+    
Sbjct: 39  LSLCDLPLENQV-LDPFDHHPPTSPS-HELFEFPFTLN---TFSNNKDDIVFCGKLIKEQ 98

Query: 81  --------------LDAGTLSLRDKDSDAEGRSFRSNSESFMRNQSFRSKSFSSPVIGSF 140
                         L +  L   DK         +S   S +  + F+S+S SS      
Sbjct: 99  DFDDLDDQSRYLFPLSSARLLNSDKKDLGSLCLAKSKPNSALSTKFFKSQSCSSS----- 158

Query: 141 GYQRSSLRRPMALIGLTRTPSRTELSEIRRRQARLAPAPMF-RVVPGEAAATVAADGTGG 200
               SS R+   LIGL + P + ELS+I++RQ+R  P+PMF  V  G+     A DG GG
Sbjct: 159 ----SSSRKHKVLIGLAKIPPKMELSDIKKRQSRRNPSPMFPPVAAGDLEVVAAGDGCGG 218

Query: 201 EM--SPWSLIRALRYRSVLVRVLAKAASSCI 207
                 W L+R LR R+ L   LAKA+  CI
Sbjct: 219 RRRGHHWGLLRPLRCRANLATALAKASLGCI 235

[Close]

BLAST of CmoCh04G027160 vs. NCBI nr
Match: gi|223530821|gb|EEF32685.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 73.9 bits (180), Expect = 3.9e-10
Identity = 71/207 (34.30%), Postives = 102/207 (49.28%), Query Frame = 1


Query: 4   VENNLEVLDLIDDDADDLSLRDFPIHEQDDV--DPPCRSPSYHDLFEFCTDLKQRTSSSS 63
           +ENN    + I++  D LSL DF + +Q+     P   S    D FEF T      S+S+
Sbjct: 1   MENN----NSIEEFEDALSLCDFALCDQESSIEHPDSPSSQEEDFFEFSTSSTSSVSNST 60

Query: 64  PPSEIVFCGKILDAGTLSLRDKDSDAEGRSFRSNSESFM---RNQSFRSKSFSSPVIGSF 123
             + I+FCGKI+   T +  D D         S+S S     RN+     S S P +   
Sbjct: 61  ADN-IIFCGKIISCKTEN-DDNDQRYNNPLCFSSSPSLRMVNRNKITSKNSSSKPALPPP 120

Query: 124 GYQRSSLRRPMALIGLTRTPSRTELSEIRRRQAR--LAPAPMFRVVPGEAAATVAADGTG 183
             + SS ++   +IGLTR PS+ ELS++R RQ R    P PMF  V G  AA V+  G+ 
Sbjct: 121 A-RSSSSKKHKVIIGLTRIPSKMELSDLRERQNRKLQTPPPMFPAVVGSEAAAVSGGGSS 180

Query: 184 GEMSPWSLIRALRYRSVLVRVLAKAAS 204
                WSL+R  +Y   +V  L +++S
Sbjct: 181 KRSRNWSLLRRAQY---MVSTLTRSSS 197

The following BLAST results are available for this feature:

BLAST of CmoCh04G027160 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G027160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNN4_CUCSA	1.0e-44	57.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G494420 PE=4 SV=1	[more]
M5X0J2_PRUPE	1.8e-14	37.00	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011401mg PE=4 SV=1	[more]
A0A061FUT8_THECC	1.5e-11	35.55	Uncharacterized protein OS=Theobroma cacao GN=TCM_043094 PE=4 SV=1	[more]
B9SUQ0_RICCO	2.7e-10	34.30	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0714620 PE=4 SV=1	[more]
A0A059BGZ2_EUCGR	4.7e-10	35.10	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02810 PE=4 SV=1	[more]

BLAST of CmoCh04G027160 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmoCh04G027160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700196046\|gb\|KGN51223.1\|	1.4e-44	57.34	hypothetical protein Csa_5G494420 [Cucumis sativus]	[more]
gi\|596005850\|ref\|XP_007218398.1\|	2.6e-14	37.00	hypothetical protein PRUPE_ppa011401mg [Prunus persica]	[more]
gi\|645255127\|ref\|XP_008233355.1\|	7.2e-12	36.32	PREDICTED: uncharacterized protein LOC103332396 [Prunus mume]	[more]
gi\|590564785\|ref\|XP_007009764.1\|	2.1e-11	35.55	Uncharacterized protein TCM_043094 [Theobroma cacao]	[more]
gi\|223530821\|gb\|EEF32685.1\|	3.9e-10	34.30	conserved hypothetical protein [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G027160.1	CmoCh04G027160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34130	FAMILY NOT NAMED	coord: 11..210 score: 3.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G027160	Cucsa.275650	Cucumber (Gy14) v1	cgycmoB0763
CmoCh04G027160	CmaCh04G025950	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G027160	Cla004733	Watermelon (97103) v1	cmowmB646
CmoCh04G027160	Csa5G494420	Cucumber (Chinese Long) v2	cmocuB716
CmoCh04G027160	MELO3C002880	Melon (DHL92) v3.5.1	cmomeB624
CmoCh04G027160	ClCG09G020520	Watermelon (Charleston Gray)	cmowcgB608
CmoCh04G027160	CSPI05G16870	Wild cucumber (PI 183967)	cmocpiB724
CmoCh04G027160	Lsi02G017060	Bottle gourd (USVL1VR-Ls)	cmolsiB640
CmoCh04G027160	MELO3C002880.2	Melon (DHL92) v3.6.1	cmomedB713
CmoCh04G027160	CsaV3_5G025880	Cucumber (Chinese Long) v3	cmocucB0848
CmoCh04G027160	Cla97C09G181940	Watermelon (97103) v2	cmowmbB772
CmoCh04G027160	Bhi06G000573	Wax gourd	cmowgoB0833
CmoCh04G027160	CsGy5G016600	Cucumber (Gy14) v2	cgybcmoB626

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G027160	Cucumber (Chinese Long) v3	cmocucB0856
CmoCh04G027160	Wax gourd	cmowgoB0894
CmoCh04G027160	Cucurbita moschata (Rifu)	cmocmoB261
CmoCh04G027160	Cucurbita moschata (Rifu)	cmocmoB345
CmoCh04G027160	Cucurbita moschata (Rifu)	cmocmoB468
CmoCh04G027160	Cucurbita moschata (Rifu)	cmocmoB476
CmoCh04G027160	Cucumber (Gy14) v1	cgycmoB0849
CmoCh04G027160	Cucurbita maxima (Rimu)	cmacmoB308
CmoCh04G027160	Cucurbita maxima (Rimu)	cmacmoB740
CmoCh04G027160	Cucurbita maxima (Rimu)	cmacmoB866
CmoCh04G027160	Wild cucumber (PI 183967)	cmocpiB736
CmoCh04G027160	Cucumber (Chinese Long) v2	cmocuB727
CmoCh04G027160	Melon (DHL92) v3.5.1	cmomeB652
CmoCh04G027160	Watermelon (Charleston Gray)	cmowcgB665
CmoCh04G027160	Watermelon (97103) v1	cmowmB704
CmoCh04G027160	Watermelon (97103) v1	cmowmB717
CmoCh04G027160	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G027160	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G027160	Cucurbita pepo (Zucchini)	cmocpeB693
CmoCh04G027160	Bottle gourd (USVL1VR-Ls)	cmolsiB626
CmoCh04G027160	Bottle gourd (USVL1VR-Ls)	cmolsiB676
CmoCh04G027160	Cucumber (Gy14) v2	cgybcmoB635
CmoCh04G027160	Melon (DHL92) v3.6.1	cmomedB742
CmoCh04G027160	Silver-seed gourd	carcmoB0370
CmoCh04G027160	Silver-seed gourd	carcmoB0940