CsaV3_5G011140 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G011140
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	RING finger and transmembrane domain-containing protein 2
Location	chr5 : 7113432 .. 7120062 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACACTTCAAGGGTCTCTCCTTTCTATGTATGTGTCACCGACTCTTGAAGAGAGGGTTTTAGGCAATGAGCTGAAAAAGTCGCATTCTTTGTGCCAATACCACTCGCCTTCCACGTGCCACTCCTTCCCATTTCACTATTGCCTTTCATTTTCCATTTCAGTTCTCCGTTTTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCCCTTCCCCAAATCTCACCGGCGACCCTCCGACCCATCTCCATCCGCCTCTTTTTCCTCCCATTTCTCCTTTTTCTCCTTTTTCTCTGGTGGGATTTCGAAGGGTCGATTCGGTAACCACGGGGAAGTTCGAAGGTTAGGGCTTTTCTTCACTTTGGGCCTCTCTGAAAATGGAGACTTCGCCTTCCAATTCTGATCCTTACTCCAATTCTTCTTCACCCACAACTGCTCGTTCTTCCTCCAGATTTGCCTTATCCCTCCCTTCTCTCAATTTCTTCCGTTCCCCTTTGTCTGTCATCTTGGATTACTCTGGAATTCTTCCCACTAGGGCTGTTCGTCATGAATCCGACCCTGTAATTAACGCTGCTGCTACTCCTGATTTGCGGGTTTTTTCTCAAAATCAGAATCACTTGATACACACTTCTTCTCCTTCTTCTTCTCCTTCTTCTGTTACAACTTCTTCTGTTACAACTTCTTCCGCTAATACTATCCCTTCTGGGGAGGTTTCCATAAGGATTATTGGGTCTGGTGAGCAAGATCCTTCTCCCAGGGCCTTGTTGCCAAATCAGGTTGTTTATGAGCAAAATGGTAGACTCCCTGTTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCATTGGTGTCTACTACTTCTTCGTCTATTCAACCTGGAGGCACTCGTGTTGATGGAGAATCTGGAAATGGAATGGAAGAGAGTGTCAATAGAGATTCTTCTTACCAGAGATATGATATTCAGCAGGTTGCCAGATGGATTGAACAAATTCTTCCATTCTCTTTGCTATTGCTGATTGTATTTATCCGTCAGCATTTAGAAGGTGCTCTCTTTTGCGTTCCCTCTTGGTAGTTCAACAATTGTTTTGAATTTCATTGCCTTTTACACTATGGGATCACTTTGAATAGATTATAGATTGTCAGTATCAAATGTCATTCGAGTGTTGGTTCTGAATTTCAACAGCTAACTTGGTTGTTACTGCTCCTTGTTAAGATACAAATAAGTGAGGTTGCTGGCCATAGTTTACTTGGGACTTCCGTTAAATCTATTAACATTTAACTCCGTTAGTCCCTGTACTTTTTAGCTCACTTACAACTTGATTGCAGAGGATGAGGTTTGATCATGTGAATTTTGGTTTGGTGTGATAAATTGTACTTGATGTGTTTTTTCCATGCTTTAGTACTGCCATTGTATCACTGTAGCTCTAAAAGCCACTGTAGTATGTTATAGGATTTCTTGCAACGTGGGTGTTGTAAGAGGTAGTGACAAAATCTTCCAAAAAGTTGAAACAGCGTCAGAACTAGTTTACTGTATTTTTAGAAGTAAAGTCAGGTGGAGAAAAATAACTTAATTAACGTTTTTGATAATTGGTTTCTACTACTAGCACATATATCATGTATTGGAGGATCAAATATGTGTTGAAAATGAAGCTCTTGGAATTGGGGAAGAAGGTGTTGAGAAAGGAGTAGAGGAATAGTGTGGCTACAGTTATGGTAGCATCAGATCATTTGGTTTGGAGATGTCACTTTTCCATAAAACTTTGAAACATATTTTTGGACATGTTTGTTTGGTAGTCGACATATACATTAATTATCGTCTATTACCTAACCAAAGGGAGTTACAGTACTACAGTATTATTTGGTATAATCACATACCCATCTAATGATCAACTTTTTTTCCTTTTTTTTTTCTTAAATTTCATTGTCTTCTGCTTTTTAGTCTCTTGCTGTAAGCCTGTAACATTCTTCTGAATCTTGAGAACTTATTTTCTTGTATATTTCCAGGGTTTTTCATCACAATTTGGATATCAGCTGTTATGTATAAGTCAAATGATATTGTCAAGAAACAGACTGCTCTAAAGGTGGCATAAACCTAAACCCAGACTTCATTTTATCTATTAGAACTTGATTTCTTTTTCTAGTTCATTGAGAAATGAGAATTCACTTGCAAGAGATTATACTGAAGTTTCTTTCTTTTTGGTCCTCTTTTTTAGGGGGAGAGGAGAATTTCTGTCCTTGCTGGAACTTCCATTACATTTTTGGTTCATGTAATTGGGATTTACTGGTGGTGTCATAGTGACGATCTTCTATACCCCTTAGTCATGCTTCCACCAAAGACTGTTCCACCTTTTTGGCATGCCTTGTTCATCATTTTGGTCAACGGTACTGGTTTTTCCCTGCTTTGGCTTATAAAGTTTCTTACTGATTGAATTGACATATGAATGTAGCTCTGGAAGATGTATGCAAAATTTATTCTTGGCCTATTATGTGGTCTGCAATCTGACTGTAAGTGTGAAGTGCTATTTCCAATTAGATAGCCTGAATGGTGATATCACAAGGACGGAAGATTGTTTGTTACCTTTTTGCTATATGTTTGAATCTTTCACCAATTGGAATGCGGATAATTGCAAAAAAGTGATAGAATGATAATTTGGTTTCTTTTGTTTTTTTGTTTTTAGATTGTTCTACCTTCCTCCTATTGTTGTATTTCTCTCACAATTTTCTTTGCTATTTTTCAAAGTTTGATTTCGATATACTCATAAGTCATAACTCTTTTGGCTCTGGCTTTTGATTGTATTGTATTGTCAGATACAATGGTGAGGCAGTTTGCAATGGCTCTCAAATGTTTTCTTCTTATTTACTACAAGAATGGCAGAGGCCACAATTTTCGTCGGCAGGTATTATGAGTTCTCAAAATTAGCTCAATCATATGGCGTGTGTCTATCTCATTTTAACAAATATAATTGAAATATCTGCAATTAATTTGTTCAGGGTCAAATTTTAACTCTTGTGGAATACACTCTTCTATTGTACCGTGCATTATTACCAACACCTGTATGGTACCGATTCTTCTTGAATAAAGATCAAGGGAGCCTCTTTTCATCATTGACAACAGGATTGTATTTAACTTTCAAGCTAACATCTGTTGTTGAGAAGGTGTGCCTTTTATCATCGTGTTTTAGTTTTTTCTCCATGAAAAGTTTTGTTTCTTGCTCTAAAATAATGTGAATATTTATACTCCTGAATGAGTACTTACAATTTAATATATTATTATTTGAAGCTAATGTTCAAAATCTTCTTTTCCTTGTTTCCTCTATAGATTCAATCATTTGTTACTGCATTTAAGGCTCTATCACAAAAAGAAGTCCATTATGGATCATATGCCACATCAGAACAGGCAAGTACACTTATTCTGTCTGTTGGTAGTCTCATTTGACATCTTCTTTAAAAGAGCTTTGTGTCTTTCCTTGCATATGACTTTACACCACTATTTTAAAAGAGTATTTGTTGAACACTTTGGGACGATTGAATGTCTCTCTTAATGTTTTTAATGTTACAAGTCATCCTCTCTTATAATTCTTGTTAATGGGATCCCCTTCTTACTTTTTCATGGATTTGTGATAGTATTATTAGCCTACTGGCTACTAGATCTGGTGGGAGAAAAATGGCCTTGATTTTCTTTTAGATGAATTATATCAATGCCCCCTCTTATCTTTCTTGGTGGTGGGGACTTATAATTTGTACCTGCTGAAATTTCATGACTGATTCATTACACAAAATTATATGGAAATTAACGTCTGTAAGAGTAAAAGGTATTTGATGTCACTCGACCAATTTTCTGTACTCAAATTAGCACGTGAAAAGGCAGTAATTGAGGATTTACACCTAGGAAGCATAAATACAGACACCGACATGGCGACGCACCATTTTTCAAAAAAGTAGGATACGACACGTCAATTTATTTATTAAAAGAATTAAATATATTTGATGCATATAAACATATTGTGAAATATTCCAATTAAAAACATCAAAATACAAGTTTAGAACCATAAGACATAACAAGTCACGGCAGAGATGGGCGGAGTCCAGCGAGCAGGTTAGGTAGAGAGGGTTGGTGGTGAGAATTTGGATAAATCGGCAAAGAGAGGAGAAATGTGTGAAAAAAATTTGAAAAGATAAAATTTAAAAAATTACCTAATAATTTTTGGGCCGGGCTAATGGGCTTTTCTAACCTTTTCTTTGTGTTTTTTCCAGTCATGTCGGGGCCGTGTCTGAAATTAAAAAAAAATAATCAACATGCCAGCTTGAGTGTCGGGGGGCATGTCGGTGTTGGAAACGTGTCCGACACTGAAATTTGGCCTTTCTAGGAGTGTCGGTGCTTCTTAGATCTACACATTTCTAGTTGTCCTAGGGAAAAGAAGTGAGCTCATTTATCTTGTTTAATATTTTTTCTAGAATGTCACTCGTTATTTAGAAGTCATCTACTATGTGCACTCAGCACTGCTCATATGTATTCCTTGTAGTGCTTAGACCTATACATGATAGATTGGATTGTTTGAATTGATTGTGAAGGGTATCATATAATTGATCATTCAAGTAACGAATCAAATGCATCTTTTAGTTCATCAACATGCACCTCATTTTTGTTTTTTTTTATTTATTTTTAATCTTTGATACCTTCCCTTCATAATTCTTGCTGATTGGAGTGGCTCTTTTTGAACATCTTTTGGTGTCCATTTGGATGGTTATGTTACTCGATTTTGGAATTTATTTGTTAACCAAGTTCTAGTCGTTTATCTTAAAACCGTATTTTCAATGAAAGTTTTGGGCTACAACTACAGGTGCAATTTACTTTTTTATTTTATCTCAACGTAGCTGCTTTTGCTTGCTAACATCTGGTTGCACGTCAGGAGATACTTCTTTCTGATTTGTTATTTTCATTTTTTTAATGCATCAAGAGGCAAAAAGTCAATGTAATAATTTGACGATTGGCCCCGGTCCTGAACATGGAACAGGAAATGTTACTTTAATATTGTCATGTACATGGTTGATTGATTATATTTGTATTGTCTCTATGCTCATAAAAATTTCTGCCTTGTGATTTCTTCAGCATTATGTTATATTATCGAAGAGGAGAAACTTCATACATTAATTCCGTTCTTTTAAGTTTTCCATATACTCAATTTTACTCCATTGCAGGTAAATGCTGCGGGAGATCTCTGTGCTATTTGCCAGGAGAAGATGAATGCTCCAATTCTATTACGTTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAGTGGTGAGTATGATGATTTCACTTCTCTTGTTGCCTACCCAAAAAGTAATAAAAATAAAGAATAACCAAAGCAAACGATAAACAACAAAATTTAACCTTTTCTAGGAATGATTGCAAACTTATCAATTCTCTAAAAGAAGAAATAATGTAAACAACCTTATGATGTTGTGCCCCAGGGATCAGGGAAGAAGTTTAGAGTTTGTTTTAAAATGTCTTCAATTTATGGTCTTCCTACTTCCCCTCCAAATATGTTCATGCATATTATAGAAACTACAAAGTAATGGTGCTGTTTCAAGTGTCTTGCATATTCAAAAACCCTTTTAGGCTTCAAACGTTACAATCCCACACCATCTTCATGTGTTTCATCTTATCATTCGTTAGGAGTTATTAATTTTTGAGGTGATTACAATTTCATAATATCACTCTTATTATTAGCATCAGGGAATCGGTTGTATCCAACTAAAATGGAGTTTTTCAAATACATCTATATGCCACACTCCTACATTAATCCACAGAGACGGGATGATCAATGAAAAAAATGGAGAACCCCCCATGAATGTTGATTAGTAATAGCAGGGATTGTTTTGACTGGAAATGTAATAGACAAAATTAGTGCCATATTAGGAATTAGTTTCAGTTGTTACAAAATGTCATTGCACTTTCATTCACCGTTGGAGTACTTGCTTTTTCAGGTTTGAAAGAGAAAGGACTTGCCCTCTTTGCCGAGCACTGGTAAAGCCTGCAGAACTCCGTACATTTGGTGATGGCTCGACCAGCTTACTCTTCCAGTTGTTCTAGAGAAAAATTTTCCATTTCCCGACATAACAAATCTATTAGTTTAACAAGGAAAGATATCGATTATTGAATGGAAACAGGGGGAAGAACAAAGATAAAAGGGAGAGAAGAAAGAAAGAGGAAAAACAAAACATCGAGGCAATCCTGAAGATACTGTGAAAATCAAAATTGGATTAGTATTATGTTGATGCTTTATAATCTCATTGTGATGAGTTAGATGCCAAAACAGAAGATGGATTTAATAAAATCCCATTTCTTCATTGAATACAATGAAATCTAATTTTTTTTAACAGGGAAAAGGGTTCCAAGTGTGAGTAGTGCAATGTTATATGAGAATTGTTGGAGAATAATTGTAATCCAATCCTTAAAGATGATTATTCCTTGTAATTTTGTATGGAGTGGCTGCCAAGTGAATTTGGTGGTCAGTCTGCATTGGTGATGTAAACACAGAAATGACAATGATTTTTATGTCTAGTAACTGTTTAGAAAAAAATCCATTCACTTCCCATTCTTTTTTTATTCTTGTCATTCAAG

mRNA sequence

ATGGAGACTTCGCCTTCCAATTCTGATCCTTACTCCAATTCTTCTTCACCCACAACTGCTCGTTCTTCCTCCAGATTTGCCTTATCCCTCCCTTCTCTCAATTTCTTCCGTTCCCCTTTGTCTGTCATCTTGGATTACTCTGGAATTCTTCCCACTAGGGCTGTTCGTCATGAATCCGACCCTGTAATTAACGCTGCTGCTACTCCTGATTTGCGGGTTTTTTCTCAAAATCAGAATCACTTGATACACACTTCTTCTCCTTCTTCTTCTCCTTCTTCTGTTACAACTTCTTCTGTTACAACTTCTTCCGCTAATACTATCCCTTCTGGGGAGGTTTCCATAAGGATTATTGGGTCTGGTGAGCAAGATCCTTCTCCCAGGGCCTTGTTGCCAAATCAGGTTGTTTATGAGCAAAATGGTAGACTCCCTGTTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCATTGGTGTCTACTACTTCTTCGTCTATTCAACCTGGAGGCACTCGTGTTGATGGAGAATCTGGAAATGGAATGGAAGAGAGTGTCAATAGAGATTCTTCTTACCAGAGATATGATATTCAGCAGGTTGCCAGATGGATTGAACAAATTCTTCCATTCTCTTTGCTATTGCTGATTGTATTTATCCGTCAGCATTTAGAAGGGTTTTTCATCACAATTTGGATATCAGCTGTTATGTATAAGTCAAATGATATTGTCAAGAAACAGACTGCTCTAAAGGGGGAGAGGAGAATTTCTGTCCTTGCTGGAACTTCCATTACATTTTTGGTTCATGTAATTGGGATTTACTGGTGGTGTCATAGTGACGATCTTCTATACCCCTTAGTCATGCTTCCACCAAAGACTGTTCCACCTTTTTGGCATGCCTTGTTCATCATTTTGGTCAACGATACAATGGTGAGGCAGTTTGCAATGGCTCTCAAATGTTTTCTTCTTATTTACTACAAGAATGGCAGAGGCCACAATTTTCGTCGGCAGGGTCAAATTTTAACTCTTGTGGAATACACTCTTCTATTGTACCGTGCATTATTACCAACACCTGTATGGTACCGATTCTTCTTGAATAAAGATCAAGGGAGCCTCTTTTCATCATTGACAACAGGATTGTATTTAACTTTCAAGCTAACATCTGTTGTTGAGAAGATTCAATCATTTGTTACTGCATTTAAGGCTCTATCACAAAAAGAAGTCCATTATGGATCATATGCCACATCAGAACAGGTAAATGCTGCGGGAGATCTCTGTGCTATTTGCCAGGAGAAGATGAATGCTCCAATTCTATTACGTTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAGTGGTTTGAAAGAGAAAGGACTTGCCCTCTTTGCCGAGCACTGGTAAAGCCTGCAGAACTCCGTACATTTGGTGATGGCTCGACCAGCTTACTCTTCCAGTTGTTCTAG

Coding sequence (CDS)

ATGGAGACTTCGCCTTCCAATTCTGATCCTTACTCCAATTCTTCTTCACCCACAACTGCTCGTTCTTCCTCCAGATTTGCCTTATCCCTCCCTTCTCTCAATTTCTTCCGTTCCCCTTTGTCTGTCATCTTGGATTACTCTGGAATTCTTCCCACTAGGGCTGTTCGTCATGAATCCGACCCTGTAATTAACGCTGCTGCTACTCCTGATTTGCGGGTTTTTTCTCAAAATCAGAATCACTTGATACACACTTCTTCTCCTTCTTCTTCTCCTTCTTCTGTTACAACTTCTTCTGTTACAACTTCTTCCGCTAATACTATCCCTTCTGGGGAGGTTTCCATAAGGATTATTGGGTCTGGTGAGCAAGATCCTTCTCCCAGGGCCTTGTTGCCAAATCAGGTTGTTTATGAGCAAAATGGTAGACTCCCTGTTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCATTGGTGTCTACTACTTCTTCGTCTATTCAACCTGGAGGCACTCGTGTTGATGGAGAATCTGGAAATGGAATGGAAGAGAGTGTCAATAGAGATTCTTCTTACCAGAGATATGATATTCAGCAGGTTGCCAGATGGATTGAACAAATTCTTCCATTCTCTTTGCTATTGCTGATTGTATTTATCCGTCAGCATTTAGAAGGGTTTTTCATCACAATTTGGATATCAGCTGTTATGTATAAGTCAAATGATATTGTCAAGAAACAGACTGCTCTAAAGGGGGAGAGGAGAATTTCTGTCCTTGCTGGAACTTCCATTACATTTTTGGTTCATGTAATTGGGATTTACTGGTGGTGTCATAGTGACGATCTTCTATACCCCTTAGTCATGCTTCCACCAAAGACTGTTCCACCTTTTTGGCATGCCTTGTTCATCATTTTGGTCAACGATACAATGGTGAGGCAGTTTGCAATGGCTCTCAAATGTTTTCTTCTTATTTACTACAAGAATGGCAGAGGCCACAATTTTCGTCGGCAGGGTCAAATTTTAACTCTTGTGGAATACACTCTTCTATTGTACCGTGCATTATTACCAACACCTGTATGGTACCGATTCTTCTTGAATAAAGATCAAGGGAGCCTCTTTTCATCATTGACAACAGGATTGTATTTAACTTTCAAGCTAACATCTGTTGTTGAGAAGATTCAATCATTTGTTACTGCATTTAAGGCTCTATCACAAAAAGAAGTCCATTATGGATCATATGCCACATCAGAACAGGTAAATGCTGCGGGAGATCTCTGTGCTATTTGCCAGGAGAAGATGAATGCTCCAATTCTATTACGTTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAGTGGTTTGAAAGAGAAAGGACTTGCCCTCTTTGCCGAGCACTGGTAAAGCCTGCAGAACTCCGTACATTTGGTGATGGCTCGACCAGCTTACTCTTCCAGTTGTTCTAG

Protein sequence

METSPSNSDPYSNSSSPTTARSSSRFALSLPSLNFFRSPLSVILDYSGILPTRAVRHESDPVINAAATPDLRVFSQNQNHLIHTSSPSSSPSSVTTSSVTTSSANTIPSGEVSIRIIGSGEQDPSPRALLPNQVVYEQNGRLPVSGDQPESPDEERVPLVSTTSSSIQPGGTRVDGESGNGMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSNDIVKKQTALKGERRISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYATSEQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF

Homology

[Close]

BLAST of CsaV3_5G011140 vs. NCBI nr
Match: XP_004146428.1 (PREDICTED: RING finger and transmembrane domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 916.8 bits (2368), Expect = 3.2e-263
Identity = 486/486 (100.00%), Postives = 486/486 (100.00%), Query Frame = 0


Query: 1   METSPSNSDPYSNSSSPTTARSSSRFALSLPSLNFFRSPLSVILDYSGILPTRAVRHESD 60
           METSPSNSDPYSNSSSPTTARSSSRFALSLPSLNFFRSPLSVILDYSGILPTRAVRHESD
Sbjct: 1   METSPSNSDPYSNSSSPTTARSSSRFALSLPSLNFFRSPLSVILDYSGILPTRAVRHESD 60

Query: 61  PVINAAATPDLRVFSQNQNHLIHTSSPSSXXXXXXXXXXXXXXXXXXXSGEVSIRIIGSG 120
           PVINAAATPDLRVFSQNQNHLIHTSSPSSXXXXXXXXXXXXXXXXXXXSGEVSIRIIGSG
Sbjct: 61  PVINAAATPDLRVFSQNQNHLIHTSSPSSXXXXXXXXXXXXXXXXXXXSGEVSIRIIGSG 120

Query: 121 EQDPSPRALLPNQVVYEQNGRLPVSGDQPESPDEERVPLVSTTSSSIQPGGTRVDGESGN 180
           EQDPSPRALLPNQVVYEQNGRLPVSGDQPESPDEERVPLVSTTSSSIQPGGTRVDGESGN
Sbjct: 121 EQDPSPRALLPNQVVYEQNGRLPVSGDQPESPDEERVPLVSTTSSSIQPGGTRVDGESGN 180

Query: 181 GMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSN 240
           GMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSN
Sbjct: 181 GMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSN 240

Query: 241 DIVKKQTALKGERRISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHAL 300
           DIVKKQTALKGERRISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHAL
Sbjct: 241 DIVKKQTALKGERRISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHAL 300

Query: 301 FIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWY 360
           FIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWY
Sbjct: 301 FIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWY 360

Query: 361 RFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYATSEQVNA 420
           RFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYATSEQVNA
Sbjct: 361 RFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYATSEQVNA 420

Query: 421 AGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTS 480
           AGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTS
Sbjct: 421 AGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTS 480

Query: 481 LLFQLF 487
           LLFQLF
Sbjct: 481 LLFQLF 486

[Close]

BLAST of CsaV3_5G011140 vs. NCBI nr
Match: XP_008456974.1 (PREDICTED: RING finger and transmembrane domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 874.0 bits (2257), Expect = 2.4e-250
Identity = 459/486 (94.44%), Postives = 463/486 (95.27%), Query Frame = 0


Query: 1   METSPSNSDPYSNSSSPTTARSSSRFALSLPSLNFFRSPLSVILDYSGILPTRAVRHESD 60
           METS SNSDPYSNSSSPTTAR+SSRF LSLPSLNFFRSPLSVILDYSGILPTRAVR ESD
Sbjct: 1   METSSSNSDPYSNSSSPTTARTSSRFGLSLPSLNFFRSPLSVILDYSGILPTRAVRDESD 60

Query: 61  PVINAAATPDLRVFSQNQNHLIHTSSPSSXXXXXXXXXXXXXXXXXXXSGEVSIRIIGSG 120
           PVINAAATPDLR FSQNQNHLI TSS        XXXXXXXXX     SGEVSIRIIGSG
Sbjct: 61  PVINAAATPDLRGFSQNQNHLIPTSS--------XXXXXXXXXANTIPSGEVSIRIIGSG 120

Query: 121 EQDPSPRALLPNQVVYEQNGRLPVSGDQPESPDEERVPLVSTTSSSIQPGGTRVDGESGN 180
           EQDPSP ALLPNQV YEQNGRLPVSGDQPESPDEERVPLVST SSSIQ GG+RVDGESGN
Sbjct: 121 EQDPSPSALLPNQVGYEQNGRLPVSGDQPESPDEERVPLVSTASSSIQSGGSRVDGESGN 180

Query: 181 GMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSN 240
           GMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSN
Sbjct: 181 GMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSN 240

Query: 241 DIVKKQTALKGERRISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHAL 300
           DIVKKQTALKGER+ISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHAL
Sbjct: 241 DIVKKQTALKGERKISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHAL 300

Query: 301 FIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWY 360
           FIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWY
Sbjct: 301 FIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWY 360

Query: 361 RFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYATSEQVNA 420
           RFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFV AFKALS+KEVHYGSYATSEQVNA
Sbjct: 361 RFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQVNA 420

Query: 421 AGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTS 480
           AGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTS
Sbjct: 421 AGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTS 478

Query: 481 LLFQLF 487
           LLFQLF
Sbjct: 481 LLFQLF 478

[Close]

BLAST of CsaV3_5G011140 vs. NCBI nr
Match: XP_022941654.1 (RING finger and transmembrane domain-containing protein 2-like [Cucurbita moschata] >XP_023541818.1 RING finger and transmembrane domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 820.5 bits (2118), Expect = 3.1e-234
Identity = 436/492 (88.62%), Postives = 453/492 (92.07%), Query Frame = 0


Query: 1   METSPSNSDPYSNSSSPTTARSSSRFALSLPSLNFFRSPLSVILDYSGILPTRAVRHESD 60
           METS SNSDPYSNSSSPT+AR+SSR+ +SLPSLNFFRSPLSVILDYSGILPTRAVRHES+
Sbjct: 1   METSASNSDPYSNSSSPTSARTSSRYGVSLPSLNFFRSPLSVILDYSGILPTRAVRHESE 60

Query: 61  PVINAAATPDLRVFSQNQNHLIHTSSPSSXXXXXXXXXXXXXXXXXXXSGEVSIRIIGSG 120
           PVINAA+TPDLRV+SQNQNHL+ T         XXXXXXXXXXXXXXX GEVSIRIIGSG
Sbjct: 61  PVINAASTPDLRVYSQNQNHLMTT---------XXXXXXXXXXXXXXXXGEVSIRIIGSG 120

Query: 121 EQDPSPRALLP------NQVVYEQNGRLPVSGDQPESPDEERVPLVSTTSSSIQPGGTRV 180
           EQDPSP  LLP       Q  YEQN RLP+SGDQPESPDEERVPLVST+SSSIQ G +RV
Sbjct: 121 EQDPSPSVLLPPNQAPVGQAGYEQNARLPISGDQPESPDEERVPLVSTSSSSIQSGSSRV 180

Query: 181 DGESGNGMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISA 240
             ESGNG EE+ NRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIW+SA
Sbjct: 181 HAESGNGTEETANRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWVSA 240

Query: 241 VMYKSNDIVKKQTALKGERRISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVP 300
           V+YKSNDIVKKQTALKGER+I VLAGTSI FLVHVIGIYWWCHSDDLL PLVMLPPKTVP
Sbjct: 241 VLYKSNDIVKKQTALKGERKIFVLAGTSIAFLVHVIGIYWWCHSDDLLSPLVMLPPKTVP 300

Query: 301 PFWHALFIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALL 360
           PFWHAL+IILVNDTMVRQ AMA KC LLIYYKNGRGHNFRRQGQILTLVEY+LLLYRALL
Sbjct: 301 PFWHALYIILVNDTMVRQLAMAFKCLLLIYYKNGRGHNFRRQGQILTLVEYSLLLYRALL 360

Query: 361 PTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYAT 420
           P PVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFV AFKALSQKEVHYGSYAT
Sbjct: 361 PAPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYAT 420

Query: 421 SEQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTF 480
           SEQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTF
Sbjct: 421 SEQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTF 480

Query: 481 GDGSTSLLFQLF 487
           GDGSTSLLFQLF
Sbjct: 481 GDGSTSLLFQLF 483

[Close]

BLAST of CsaV3_5G011140 vs. NCBI nr
Match: XP_022986350.1 (E3 ubiquitin-protein ligase RNFT1-like [Cucurbita maxima])

HSP 1 Score: 820.1 bits (2117), Expect = 4.0e-234
Identity = 435/492 (88.41%), Postives = 452/492 (91.87%), Query Frame = 0


Query: 1   METSPSNSDPYSNSSSPTTARSSSRFALSLPSLNFFRSPLSVILDYSGILPTRAVRHESD 60
           METS SNSDPYSNSSSPT AR+SSR+ +SLPSLNFFRSPLSVILDYSGILPTR VRHES+
Sbjct: 1   METSASNSDPYSNSSSPTNARTSSRYGVSLPSLNFFRSPLSVILDYSGILPTRVVRHESE 60

Query: 61  PVINAAATPDLRVFSQNQNHLIHTSSPSSXXXXXXXXXXXXXXXXXXXSGEVSIRIIGSG 120
           PVINAA+TPDLRV+SQNQNHL+ T         XXXXXXXXXXXXXXX GEVSIRIIGSG
Sbjct: 61  PVINAASTPDLRVYSQNQNHLMTT---------XXXXXXXXXXXXXXXXGEVSIRIIGSG 120

Query: 121 EQDPSPRALLP------NQVVYEQNGRLPVSGDQPESPDEERVPLVSTTSSSIQPGGTRV 180
           EQ+PSP  LLP       Q  YEQN RLP+SGDQPESPDEERVPLVST+SSSIQ G +RV
Sbjct: 121 EQNPSPSVLLPPNQAPVGQAGYEQNARLPISGDQPESPDEERVPLVSTSSSSIQSGSSRV 180

Query: 181 DGESGNGMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISA 240
             ESGNG EE+ NRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIW+SA
Sbjct: 181 HAESGNGTEETANRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWVSA 240

Query: 241 VMYKSNDIVKKQTALKGERRISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVP 300
           V+YKSNDIVKKQTALKGER+I VLAGTSI FLVHVIGIYWWCHSDDLLYPLVMLPPKTVP
Sbjct: 241 VLYKSNDIVKKQTALKGERKIFVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVP 300

Query: 301 PFWHALFIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALL 360
           PFWHAL+IILVNDTMVRQ AMA KC LLIYYKNGRGHNFRRQGQILTLVEY+LLLYRALL
Sbjct: 301 PFWHALYIILVNDTMVRQLAMAFKCLLLIYYKNGRGHNFRRQGQILTLVEYSLLLYRALL 360

Query: 361 PTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYAT 420
           P PVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFV AFKALSQKEVHYGSYAT
Sbjct: 361 PAPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYAT 420

Query: 421 SEQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTF 480
           SEQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTF
Sbjct: 421 SEQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTF 480

Query: 481 GDGSTSLLFQLF 487
           GDGSTSLLFQLF
Sbjct: 481 GDGSTSLLFQLF 483

[Close]

BLAST of CsaV3_5G011140 vs. NCBI nr
Match: XP_022146804.1 (RING finger and transmembrane domain-containing protein 1-like [Momordica charantia])

HSP 1 Score: 814.3 bits (2102), Expect = 2.2e-232
Identity = 442/492 (89.84%), Postives = 454/492 (92.28%), Query Frame = 0


Query: 1   METSPSNSDPYSNSSSPTTARSSSRFALSLPSLNFFRSPLSVILDYSGILPTRAVRHESD 60
           METS SNSDP+SNSSSPTTARSSSRF LSLPS+NFFRSPLSVILDYSGILPTRAVRHES+
Sbjct: 1   METSASNSDPFSNSSSPTTARSSSRFGLSLPSMNFFRSPLSVILDYSGILPTRAVRHESE 60

Query: 61  PV-INAAATPDLRVFSQNQNHLIHTSSPSSXXXXXXXXXXXXXXXXXXXSGEVSIRIIGS 120
           PV +N AATPDLRVFSQN     H      XXXXXXXXXXXXXXXXXXX GEVSIRIIGS
Sbjct: 61  PVPVNGAATPDLRVFSQN-----HNXXXXXXXXXXXXXXXXXXXXXXXXXGEVSIRIIGS 120

Query: 121 GEQDPSPRALLPNQVV-----YEQNGRLPVSGDQPESPDEERVPLVSTTSSSIQPGGTRV 180
           GEQDPS   LLP+Q +     YEQN    VSGDQPESPDEERVPLV T SSSIQ G +RV
Sbjct: 121 GEQDPSSSGLLPSQALVGQAGYEQNSGRSVSGDQPESPDEERVPLVPTASSSIQSGSSRV 180

Query: 181 DGESGNGMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISA 240
           DGESGNG+EESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISA
Sbjct: 181 DGESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISA 240

Query: 241 VMYKSNDIVKKQTALKGERRISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVP 300
           VMYKSNDIVKKQTALKGER+ISVLAGTSI FLVHVIGIYWW H+DDLLYPLVMLPPKTVP
Sbjct: 241 VMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWSHTDDLLYPLVMLPPKTVP 300

Query: 301 PFWHALFIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALL 360
           PFWHALFIILVNDTM RQ AMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALL
Sbjct: 301 PFWHALFIILVNDTMARQVAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALL 360

Query: 361 PTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYAT 420
           PTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTS+VEKIQSFV AFKALS+KEVHYGSYAT
Sbjct: 361 PTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSIVEKIQSFVAAFKALSRKEVHYGSYAT 420

Query: 421 SEQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTF 480
           SEQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTF
Sbjct: 421 SEQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTF 480

Query: 481 GDGSTSLLFQLF 487
           GDGSTSLLFQLF
Sbjct: 481 GDGSTSLLFQLF 487

[Close]

BLAST of CsaV3_5G011140 vs. TAIR10
Match: AT5G01960.1 (RING/U-box superfamily protein)

HSP 1 Score: 531.2 bits (1367), Expect = 6.8e-151
Identity = 278/478 (58.16%), Postives = 337/478 (70.50%), Query Frame = 0


Query: 15  SSPTTARSSSRFALSLPSLNFFRSPLSVILDYSGILPTR-AVRHESDPVINAAATPDLRV 74
           +S  + R S R    L + N  ++P+S +L+YSG+   R +  HE++ ++          
Sbjct: 6   ASHDSFRGSPRRNSILSASNIIQAPISTLLEYSGLFRARPSPSHEAETLV---------- 65

Query: 75  FSQNQNHLIHTSSPSSXXXXXXXXXXXXXXXXXXXSGEVSIRIIGSGEQDPSPRALLPNQ 134
                      S  SS                   +GEV+IRIIG+ EQD          
Sbjct: 66  -----------SDDSS----------------GLSNGEVAIRIIGNTEQD---------- 125

Query: 135 VVYEQNGRLPVSGDQPESPDEERVPLVSTTSSSIQPGGTRVDGES-----GNGMEESVNR 194
                        D     +     L+ ++++ + P G   +G S          ++ +R
Sbjct: 126 ----------AETDTNALREPGHSELLGSSATQVDPMGGASEGASQAAPGDPAAGDAASR 185

Query: 195 DSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSNDIVKKQTA 254
           DS YQRYDIQQ ARWIEQILPFSLLLL+VFIRQHL+GFF+ IWI+AVM+KSNDI+KKQTA
Sbjct: 186 DSPYQRYDIQQAARWIEQILPFSLLLLVVFIRQHLQGFFVAIWIAAVMFKSNDILKKQTA 245

Query: 255 LKGERRISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIILVNDT 314
           LKGER IS L G S+ F  HV+G+YWW   DDLLYPL+MLPPK++PPFWHA+FII+VNDT
Sbjct: 246 LKGERHISALIGISVAFTAHVVGVYWWFRKDDLLYPLIMLPPKSIPPFWHAIFIIVVNDT 305

Query: 315 MVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQ 374
           +VRQ +M  KCFLL+YYKN RG N+R+QGQ+LTLVEY +LLYR+LLPTPVWYRFFLNKD 
Sbjct: 306 LVRQASMIFKCFLLMYYKNSRGRNYRKQGQLLTLVEYFMLLYRSLLPTPVWYRFFLNKDY 365

Query: 375 GSLFSSLTTGLYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYATSEQVNAAGDLCAIC 434
           GSLFSSL TGLYLTFKLTSVVEK+QSF TA KALS+KEVHYGSYAT+EQVNAAGDLCAIC
Sbjct: 366 GSLFSSLMTGLYLTFKLTSVVEKVQSFFTALKALSRKEVHYGSYATTEQVNAAGDLCAIC 425

Query: 435 QEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 487
           QEKM+ PILLRCKH+FCEDCVSEWFERERTCPLCRALVKPA+L++FGDGSTSL FQ+F
Sbjct: 426 QEKMHTPILLRCKHMFCEDCVSEWFERERTCPLCRALVKPADLKSFGDGSTSLFFQIF 426

[Close]

BLAST of CsaV3_5G011140 vs. TAIR10
Match: AT1G65040.2 (RING/U-box superfamily protein)

HSP 1 Score: 63.5 bits (153), Expect = 4.0e-10
Identity = 44/130 (33.85%), Postives = 64/130 (49.23%), Query Frame = 0


Query: 345 YTLLLYRALLPTPVWYRFFLNKDQG-SLFSSLTTGLYLTFKLTSVVEKIQSFVTAFKALS 404
           + L L R LL   ++  FFL       L   L   LY TF+   +  ++  ++   K  S
Sbjct: 214 FYLELVRDLLHLSMYLCFFLMIFMNYGLPLHLIRELYETFRNFKI--RVTDYLRYRKITS 273

Query: 405 QKEVHYGSYATSEQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCR 464
                +   AT E++++    C IC+E+M +   L C H+F   C+  W ER+ TCP CR
Sbjct: 274 NMNDRFPD-ATPEELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTCR 333

Query: 465 ALVKPAELRT 474
           ALV PAE  T
Sbjct: 334 ALVVPAENAT 340

[Close]

BLAST of CsaV3_5G011140 vs. TAIR10
Match: AT3G16090.1 (RING/U-box superfamily protein)

HSP 1 Score: 62.0 bits (149), Expect = 1.2e-09
Identity = 34/95 (35.79%), Postives = 50/95 (52.63%), Query Frame = 0


Query: 379 LYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYATSEQVNAAGDLCAICQEKMNAPILL 438
           LY TF+   +  ++  ++   K  S     +   AT E++ A+   C IC+E+M     L
Sbjct: 249 LYETFRNFQI--RVSDYLRYRKITSNMNDRFPD-ATPEELTASDATCIICREEMTNAKKL 308

Query: 439 RCKHIFCEDCVSEWFERERTCPLCRALVKPAELRT 474
            C H+F   C+  W ER++TCP CRALV P E  T
Sbjct: 309 ICGHLFHVHCLRSWLERQQTCPTCRALVVPPENAT 340

[Close]

BLAST of CsaV3_5G011140 vs. TAIR10
Match: AT2G42350.1 (RING/U-box superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-07
Identity = 24/58 (41.38%), Postives = 33/58 (56.90%), Query Frame = 0


Query: 419 NAAGDLCAIC----QEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELR 473
           + AG  CA+C    +EK NA +L  CKH+F   CV  W   + TCP+CR   +P+  R
Sbjct: 94  DVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPR 151

[Close]

BLAST of CsaV3_5G011140 vs. TAIR10
Match: AT5G05810.1 (RING/U-box superfamily protein)

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-06
Identity = 22/56 (39.29%), Postives = 29/56 (51.79%), Query Frame = 0


Query: 425 CAICQEKMNAPILLR----CKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGD 477
           CA+C  +     +LR    CKH F  +CV  W +   TCPLCR  V P ++   GD
Sbjct: 92  CAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLIGD 147

[Close]

BLAST of CsaV3_5G011140 vs. Swiss-Prot
Match: sp|Q96EX2|RNFT2_HUMAN (RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens OX=9606 GN=RNFT2 PE=2 SV=2)

HSP 1 Score: 149.1 bits (375), Expect = 1.3e-34
Identity = 87/294 (29.59%), Postives = 157/294 (53.40%), Query Frame = 0


Query: 196 DIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSNDIVKKQTALKGERRI 255
           +++ V  W+++ LPF L+LL     QH  G  + I +++    +N  +++Q +LK +R +
Sbjct: 155 ELKAVICWLQKGLPFILILLAKLCFQHKLGIAVCIGMASTFAYANSTLREQVSLKEKRSV 214

Query: 256 SVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPK-TVPPFWHALFIILVNDTMVRQFA 315
            V+         + + + +   S  L   L+ L P   +  F+  L+I+ + D +++   
Sbjct: 215 LVILWILAFLAGNTLYVLYTFSSQQLYNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYIT 274

Query: 316 MALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLF-- 375
           +ALKC ++   K       + +G+   ++E    L+R+L+P  +WY++ +  D  + +  
Sbjct: 275 IALKCLIVALPKIILA--VKSKGKFYLVIEELSQLFRSLVPIQLWYKYIMGDDSSNSYFL 334

Query: 376 SSLTTGLYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYATSEQVNAAGDLCAICQEKM 435
             +   LY   K   +  ++     A K L   + +YG  AT +Q   AGD+CAICQ + 
Sbjct: 335 GGVLIVLYSLCKSFDICGRVGGVRKALKLLCTSQ-NYGVRATGQQCTEAGDICAICQAEF 394

Query: 436 NAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 487
             P++L C+H+FCE+C+  W +RERTCPLCR+ V    LR + DG+TS  FQ++
Sbjct: 395 REPLILLCQHVFCEECLCLWLDRERTCPLCRS-VAVDTLRCWKDGATSAHFQVY 444

[Close]

BLAST of CsaV3_5G011140 vs. Swiss-Prot
Match: sp|Q5M7Z0|RNFT1_HUMAN (E3 ubiquitin-protein ligase RNFT1 OS=Homo sapiens OX=9606 GN=RNFT1 PE=1 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 5.0e-34
Identity = 87/298 (29.19%), Postives = 152/298 (51.01%), Query Frame = 0


Query: 196 DIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSNDIVKKQTALKGERRI 255
           + + + +W+++ LP+ L+L +  + QH+ G  + I +      +N  +  Q  L+ ER  
Sbjct: 143 EFRYLFKWLQKSLPYILILSVKLVMQHITGISLGIGLLTTFMYANKSIVNQVFLR-ERSS 202

Query: 256 SVLAGTSITFLV-HVIGIYWWCHSDDLLYPLVMLPPKTVP-PFWHALFIILVNDTMVRQF 315
            +     + FL    + +Y+  HS  L Y L+ L P      FW   +I+ + D +++ F
Sbjct: 203 KIQCAWLLVFLAGSSVLLYYTFHSQSLYYSLIFLNPTLDHLSFWEVFWIVGITDFILKFF 262

Query: 316 AMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFS 375
            M LKC +L+         F+ +G    L+E     YR  +P PVW+R+ ++  +    +
Sbjct: 263 FMGLKCLILLV--PSFIMPFKSKGYWYMLLEELCQYYRTFVPIPVWFRYLISYGEFGNVT 322

Query: 376 SLTTG-----LYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYATSEQVNAAGDLCAIC 435
             + G     LYL  KL      +++F    + +   +  YG  A+  Q +   D+C+IC
Sbjct: 323 RWSLGILLALLYLILKLLEFFGHLRTFRQVLR-IFFTQPSYGVAASKRQCSDVDDICSIC 382

Query: 436 QEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 487
           Q +   PILL C+HIFCE+C++ WF RE+TCPLCR ++    +  + DG+TS   Q++
Sbjct: 383 QAEFQKPILLICQHIFCEECMTLWFNREKTCPLCRTVISD-HINKWKDGATSSHLQIY 435

[Close]

BLAST of CsaV3_5G011140 vs. Swiss-Prot
Match: sp|Q9DCN7|RNFT1_MOUSE (E3 ubiquitin-protein ligase RNFT1 OS=Mus musculus OX=10090 GN=Rnft1 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.9e-33
Identity = 87/298 (29.19%), Postives = 151/298 (50.67%), Query Frame = 0


Query: 196 DIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSNDIVKKQTALKGERRI 255
           + + + +W+++ LP+ L+L I  + QH+ G  + I +      +N  +  Q  L+ ER  
Sbjct: 103 EFRYLFKWLQKSLPYILILGIKLVMQHITGISLGIGLLTTFMYANKSIVNQVFLR-ERSS 162

Query: 256 SVLAGTSITFLV-HVIGIYWWCHSDDLLYPLVMLPPKTVP-PFWHALFIILVNDTMVRQF 315
            +     + FL    + +Y+  HS  L Y L+ L P      FW  L+I+ + D +++ F
Sbjct: 163 KLRCAWLLVFLAGSSVLLYYTFHSQSLHYSLIFLNPTLEQLSFWEVLWIVGITDFILKFF 222

Query: 316 AMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFS 375
            M LKC +L+         F+ +G    L+E     YR  +P PVW+R+ ++  +    +
Sbjct: 223 FMGLKCLILLV--PSFIMPFKSKGYWYMLLEELCQYYRIFVPIPVWFRYLISYGEFGNVT 282

Query: 376 SLTTG-----LYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYATSEQVNAAGDLCAIC 435
           + + G     LYL  KL      +++F    +    +   YG  A+  Q +    +C IC
Sbjct: 283 TWSLGILLALLYLILKLLDFFGHLRTFRQVLRVFFTRP-SYGVPASKRQCSDMDGICTIC 342

Query: 436 QEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 487
           Q +   P+LL C+HIFCE+C++ WF RE+TCPLCR ++    +  + DG+TS   Q++
Sbjct: 343 QAEFQKPVLLFCQHIFCEECITLWFNREKTCPLCRTVISEC-INKWKDGATSSHLQMY 395

[Close]

BLAST of CsaV3_5G011140 vs. Swiss-Prot
Match: sp|Q5RAG4|RNFT2_PONAB (RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii OX=9601 GN=RNFT2 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.5e-33
Identity = 86/294 (29.25%), Postives = 155/294 (52.72%), Query Frame = 0


Query: 196 DIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSNDIVKKQTALKGERRI 255
           +++ V  W+++ LPF L+LL     QH  G  + I +++    +N  +++Q +LK +R +
Sbjct: 155 ELKAVICWLQKGLPFILILLAKLCFQHKLGIAVCIGMASTFAYANSTLREQVSLKEKRSV 214

Query: 256 SVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPK-TVPPFWHALFIILVNDTMVRQFA 315
            V+         + + + +   S  L   L+ L P      F+  L+I+ + D +++   
Sbjct: 215 LVILWILAFLAGNTLYVLYTFSSQQLYNSLIFLKPNLETLDFFDLLWIVGIADFVLKYIT 274

Query: 316 MALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLF-- 375
           +ALKC ++   K       + +G+   ++E    L+R+L+P  +WY++ +  D  + +  
Sbjct: 275 IALKCLIVALPKIILA--VKSKGKFYLVIEELSQLFRSLVPIQLWYKYIMGDDSSNSYFL 334

Query: 376 SSLTTGLYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYATSEQVNAAGDLCAICQEKM 435
             +   LY   K   +  ++     A K L   + +YG  AT +Q   AGD+CAICQ + 
Sbjct: 335 GGVLIVLYSLCKSFDICGRVGGVRKALKLLCTSQ-NYGVRATGQQCTEAGDICAICQAEF 394

Query: 436 NAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 487
             P++L C+H+FCE+C+  W +RERTCPL R+ V    LR + DG+TS  FQ++
Sbjct: 395 REPLILLCQHVFCEECLCLWLDRERTCPLSRS-VAVDTLRCWKDGATSAHFQVY 444

[Close]

BLAST of CsaV3_5G011140 vs. Swiss-Prot
Match: sp|Q3UF64|RNFT2_MOUSE (RING finger and transmembrane domain-containing protein 2 OS=Mus musculus OX=10090 GN=Rnft2 PE=2 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 3.6e-32
Identity = 92/325 (28.31%), Postives = 165/325 (50.77%), Query Frame = 0


Query: 165 SSIQPGGTRVDGESGNGMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLE 224
           S +Q  G    G S  G++E     +     +++ V  W+++ LPF L+LL     QH  
Sbjct: 126 SLLQHVGGDHRGHSEEGVDEQPGTPAP-ALSELKAVISWLQKGLPFILILLAKLCFQHKL 185

Query: 225 GFFITIWISAVMYKSNDIVKKQTALKGERRISVLAGTSITFLVHVIGIYWWCHSDDLLYP 284
           G  + I +++    +N  +++Q +LK +R + V+         + + + +   S  L   
Sbjct: 186 GIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTMYVLYTFSSQQLYSS 245

Query: 285 LVMLPPK-TVPPFWHALFIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLV 344
           L+ L P      F+  L+I+ + D +++   +ALKC ++   K       + +G+   ++
Sbjct: 246 LIFLKPNLETLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILA--VKSKGKFYLVI 305

Query: 345 EYTLLLYRALLPTPVWYRFFLNKDQGSLF--SSLTTGLYLTFKLTSVVEKIQSFVTAFKA 404
           E    L+R+L+P  +WY++ +  D  + +    +   LY   K   +  ++     A K 
Sbjct: 306 EELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGLRKALKL 365

Query: 405 LSQKEVHYGSYATSEQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPL 464
           L   + +YG  AT +Q   AG +CAICQ +   P++L C+H+FCE+C+  W +RERTCPL
Sbjct: 366 LCTSQ-NYGVRATGQQCTEAGAVCAICQAEFRDPMILLCQHVFCEECLCLWLDRERTCPL 425

Query: 465 CRALVKPAELRTFGDGSTSLLFQLF 487
           CR+ V    LR + DG+TS   Q++
Sbjct: 426 CRS-VAVDTLRCWKDGATSAHLQVY 445

[Close]

BLAST of CsaV3_5G011140 vs. TrEMBL
Match: tr|A0A1S3C4F3|A0A1S3C4F3_CUCME (RING finger and transmembrane domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103496765 PE=4 SV=1)

HSP 1 Score: 874.0 bits (2257), Expect = 1.6e-250
Identity = 459/486 (94.44%), Postives = 463/486 (95.27%), Query Frame = 0


Query: 1   METSPSNSDPYSNSSSPTTARSSSRFALSLPSLNFFRSPLSVILDYSGILPTRAVRHESD 60
           METS SNSDPYSNSSSPTTAR+SSRF LSLPSLNFFRSPLSVILDYSGILPTRAVR ESD
Sbjct: 1   METSSSNSDPYSNSSSPTTARTSSRFGLSLPSLNFFRSPLSVILDYSGILPTRAVRDESD 60

Query: 61  PVINAAATPDLRVFSQNQNHLIHTSSPSSXXXXXXXXXXXXXXXXXXXSGEVSIRIIGSG 120
           PVINAAATPDLR FSQNQNHLI TSS        XXXXXXXXX     SGEVSIRIIGSG
Sbjct: 61  PVINAAATPDLRGFSQNQNHLIPTSS--------XXXXXXXXXANTIPSGEVSIRIIGSG 120

Query: 121 EQDPSPRALLPNQVVYEQNGRLPVSGDQPESPDEERVPLVSTTSSSIQPGGTRVDGESGN 180
           EQDPSP ALLPNQV YEQNGRLPVSGDQPESPDEERVPLVST SSSIQ GG+RVDGESGN
Sbjct: 121 EQDPSPSALLPNQVGYEQNGRLPVSGDQPESPDEERVPLVSTASSSIQSGGSRVDGESGN 180

Query: 181 GMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSN 240
           GMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSN
Sbjct: 181 GMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSN 240

Query: 241 DIVKKQTALKGERRISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHAL 300
           DIVKKQTALKGER+ISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHAL
Sbjct: 241 DIVKKQTALKGERKISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHAL 300

Query: 301 FIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWY 360
           FIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWY
Sbjct: 301 FIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWY 360

Query: 361 RFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYATSEQVNA 420
           RFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFV AFKALS+KEVHYGSYATSEQVNA
Sbjct: 361 RFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQVNA 420

Query: 421 AGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTS 480
           AGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTS
Sbjct: 421 AGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTS 478

Query: 481 LLFQLF 487
           LLFQLF
Sbjct: 481 LLFQLF 478

[Close]

BLAST of CsaV3_5G011140 vs. TrEMBL
Match: tr|M5WZS0|M5WZS0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G266800 PE=4 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 7.0e-166
Identity = 313/499 (62.73%), Postives = 370/499 (74.15%), Query Frame = 0


Query: 1   METSPSNSDPYSNSSSPTTARSSSRF-ALSLPSLNFFRSPLSVILDYSGILPTRAVRHES 60
           ME SP N+ P S  +        + F ++  P+L FF+SPLS +LDYSGIL   + RHE+
Sbjct: 1   MEASPGNTSPTSGGNXXXXXXXXTSFGSMQFPALRFFQSPLSFVLDYSGILSPSSSRHEA 60

Query: 61  D-PVINAAATPDLRVFSQNQNHLIHTSSPSSXXXXXXXXXXXXXXXXXXXSGEVSIRIIG 120
           D PV+NA    D R  S +      TS  S+                   +GEVSIRIIG
Sbjct: 61  DAPVVNAVVVADSRPHSPS----ACTSGSSN-------------------TGEVSIRIIG 120

Query: 121 SGEQDPSPRALLPNQVVYEQNGRLPVSGDQPESPDE-----------ERVPLVSTTSSSI 180
           +GEQ+             + NG       + +S D            ERVPLV  +S   
Sbjct: 121 AGEQEDRGNGAATVPFHGDGNGGSLGHSGRVQSLDNLAGTVNGVGSGERVPLVPPSS--- 180

Query: 181 QPGGTRVDGESGNGMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFF 240
            P   R  G++G+G++ + +RDS+YQRYDIQQ+ARWIEQ+LPFSLLLL+VFIRQHL+GFF
Sbjct: 181 -PEHGRDVGDTGDGVDNN-SRDSAYQRYDIQQIARWIEQVLPFSLLLLVVFIRQHLQGFF 240

Query: 241 ITIWISAVMYKSNDIVKKQTALKGERRISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVM 300
           +TIW+SAVMY+SND+V+KQTALKG+R+I VL   +  F++HV+G+YWW  SDDLLYPL M
Sbjct: 241 VTIWVSAVMYRSNDVVRKQTALKGDRKIPVLLSIAAAFMLHVVGVYWWYRSDDLLYPLAM 300

Query: 301 LPPKTVPPFWHALFIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTL 360
           LPPK +PPFWHA+FIILVNDTMVRQ  MALKC LLIYYKNGRGHN+RRQGQILT+VEYTL
Sbjct: 301 LPPKAIPPFWHAIFIILVNDTMVRQATMALKCLLLIYYKNGRGHNYRRQGQILTVVEYTL 360

Query: 361 LLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVTAFKALSQKEV 420
           LLYRALLP PVWYRFFLNKD GSLFSSLTTGLYLTFKLTSVVEK+QSF  + +ALS+K++
Sbjct: 361 LLYRALLPAPVWYRFFLNKDNGSLFSSLTTGLYLTFKLTSVVEKVQSFFASIRALSRKDI 420

Query: 421 HYGSYATSEQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVK 480
           HYG+YAT EQVNAAGDLCAICQEKM+APILLRCKHIFCEDCVSEWFERERTCPLCRALVK
Sbjct: 421 HYGAYATLEQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVK 471

Query: 481 PAELRTFGDGSTSLLFQLF 487
           PA+LRTFGDGSTSL FQ F
Sbjct: 481 PADLRTFGDGSTSLFFQFF 471

[Close]

BLAST of CsaV3_5G011140 vs. TrEMBL
Match: tr|A0A2P6SLU7|A0A2P6SLU7_ROSCH (Putative transcription factor C2H2 family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0372711 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 2.0e-165
Identity = 309/473 (65.33%), Postives = 368/473 (77.80%), Query Frame = 0


Query: 21  RSSSRFALSLPSLNFFRSPLSVILDYSGIL-PT-RAVRHESD-PVINAAATPDLRVFSQN 80
           R++S  ++  P+L FF+SPLS +LDYSGIL PT  + RHESD PV+NA    D R  S  
Sbjct: 26  RATSFGSMQFPALRFFQSPLSFLLDYSGILSPTSSSSRHESDAPVVNAGVVADSRPHSP- 85

Query: 81  QNHLIHTSSPSSXXXXXXXXXXXXXXXXXXXSGEVSIRIIGSGEQD----PSPRALLPNQ 140
                 TS  S+                   +GEVSIRIIG+GEQ+     +    L  Q
Sbjct: 86  ---AACTSGSSN-------------------AGEVSIRIIGAGEQEDRGNSNETTALQGQ 145

Query: 141 VVYEQNGRLPVSGDQPESPDEERVPLVSTTSSSIQPGGTRVDGESGNGMEESVNRDSSYQ 200
              E  G   V G   ++  +ERVPLV+ +S   +       GE+GNG+EE+ +RDS+YQ
Sbjct: 146 RGEENGG---VEGVDNQAGMDERVPLVAPSSPEHEA------GEAGNGVEEN-SRDSAYQ 205

Query: 201 RYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSNDIVKKQTALKGER 260
           RYDIQQVARWIEQ+LPFSLLLL+VFIRQHL+GFF+TIWISAVMY+SNDIV+KQTALKG+R
Sbjct: 206 RYDIQQVARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWISAVMYRSNDIVRKQTALKGDR 265

Query: 261 RISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIILVNDTMVRQF 320
           +IS L G ++ F++HV+G+YWW  +DDLLYPL MLPPK +PPFWHA+FIILVNDT+VRQ 
Sbjct: 266 KISFLVGIAVVFMLHVVGVYWWYRNDDLLYPLAMLPPKAIPPFWHAIFIILVNDTLVRQA 325

Query: 321 AMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFS 380
            MA KC LL+YYKNGRGHN+RRQGQ+LT+VEY+LLLYRALLP PVWYRFFLNK+ GSLFS
Sbjct: 326 TMAFKCLLLVYYKNGRGHNYRRQGQMLTVVEYSLLLYRALLPAPVWYRFFLNKEYGSLFS 385

Query: 381 SLTTGLYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYATSEQVNAAGDLCAICQEKMN 440
           SL TGLYLTFKLTSVVEK+QSF  + +ALS+K++HYGS+AT EQVNAAGDLCAICQEKM+
Sbjct: 386 SLITGLYLTFKLTSVVEKVQSFFASIRALSRKDIHYGSHATLEQVNAAGDLCAICQEKMH 445

Query: 441 APILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 487
           APILLRCKHIFCEDCVSEWFERERTCPLCRA+VKPA+LRTFGDGSTSL FQ F
Sbjct: 446 APILLRCKHIFCEDCVSEWFERERTCPLCRAVVKPADLRTFGDGSTSLFFQFF 465

[Close]

BLAST of CsaV3_5G011140 vs. TrEMBL
Match: tr|A0A2R6RWJ9|A0A2R6RWJ9_ACTCH (RING finger and transmembrane domain-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc01499 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.3e-159
Identity = 306/491 (62.32%), Postives = 363/491 (73.93%), Query Frame = 0


Query: 1   METSP-SNSDPYSNSSSPTTARSSSRFALSLPSLNFFRSPLSVILDYSGILPTRAVRHES 60
           METS  S+ D Y+NSSS  T+ +S R      +L+F R+P+S +L+YSG+L  +   HE+
Sbjct: 1   METSSVSDPDTYTNSSS--TSNNSRRNGFQFSTLSFLRAPVSTLLEYSGVLRPQPDHHEA 60

Query: 61  DPVINAAATPDLRVFSQNQNHLIHTSSPSSXXXXXXXXXXXXXXXXXXXSGEVSIRIIGS 120
           + ++        R  S +   +                           SGEVSIRIIG+
Sbjct: 61  ENLVIDGGDEQFRRRSSDFGSV-------------------------SGSGEVSIRIIGA 120

Query: 121 GEQDPSPRALLPNQVVYEQNGRL--PVSGDQ--PESPDEERVPLVSTTSSSIQPGGTRVD 180
           GEQ+          V +E++      +SG +   E  D   V      S    P  T  D
Sbjct: 121 GEQE---------HVGFEESEEAIDQISGPRLGDEGRDGGEVGGGERVSGGASPSATAND 180

Query: 181 GESGNGMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAV 240
             +G+G   +  RDSSYQRYDIQQVARW+EQ+LPFSLLLL+VFIRQHL+GFF+TIWI+AV
Sbjct: 181 ARNGDG--GNGGRDSSYQRYDIQQVARWVEQVLPFSLLLLVVFIRQHLQGFFVTIWITAV 240

Query: 241 MYKSNDIVKKQTALKGERRISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPP 300
           M+KSNDI++KQTALKGER+ISVL G S  F++ VIG+YWW   DDLLYPL ++PPK VPP
Sbjct: 241 MFKSNDILRKQTALKGERKISVLVGISTVFMLQVIGVYWWHRHDDLLYPLCLVPPKAVPP 300

Query: 301 FWHALFIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLP 360
           FWHA+FIILVNDT+VRQ AMALKC LL+YYKNGRGHNFRRQGQ+LTL+EYTLLLYRALLP
Sbjct: 301 FWHAIFIILVNDTLVRQAAMALKCMLLMYYKNGRGHNFRRQGQMLTLIEYTLLLYRALLP 360

Query: 361 TPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYATS 420
           TPVWYRFFLNKD GSLFSSLTTGLYLTFKLTSVVEK+QSF T+ KALS+K++HYGSYAT 
Sbjct: 361 TPVWYRFFLNKDYGSLFSSLTTGLYLTFKLTSVVEKVQSFFTSLKALSRKDIHYGSYATL 420

Query: 421 EQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFG 480
           EQVNAAGDLCAICQEKM+APILLRCKHIFCEDCVSEWFERERTCPLCRALV+ A+LR+FG
Sbjct: 421 EQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVRAADLRSFG 453

Query: 481 DGSTSLLFQLF 487
           DGSTSL FQLF
Sbjct: 481 DGSTSLFFQLF 453

[Close]

BLAST of CsaV3_5G011140 vs. TrEMBL
Match: tr|A0A2R6RRX3|A0A2R6RRX3_ACTCH (RING finger and transmembrane domain-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc03080 PE=4 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 8.2e-159
Identity = 298/502 (59.36%), Postives = 357/502 (71.12%), Query Frame = 0


Query: 1   METSPSNSDPYSNSSSPTTARSSSRFALSLPSLNFFRSPLSVILDYSGILPTRAVRHESD 60
           ME S  NSD Y  SSS  ++ +S R+ + L + NFF SPLS +L+YSGIL TR+   ESD
Sbjct: 1   MEPSAGNSDAYRVSSS--SSSTSRRYGMHLSASNFFHSPLSTLLEYSGILRTRSSHPESD 60

Query: 61  PVINAAATPDLRVFSQNQNHLIHTSSPSSXXXXXXXXXXXXXXXXXXXSGEVSIRIIGSG 120
            +IN   +  ++   QN + +                            GEVSIRIIG+G
Sbjct: 61  SLINTGGSVGIQDRVQNDSSV------------------------YGNGGEVSIRIIGAG 120

Query: 121 EQDPSPRALLPNQVVYEQNGRLPVSGDQPESPDEERVPLVSTTSSSIQPGGTRVDGESGN 180
           EQD      +     + Q        D    P        S  S+    G +R D  +  
Sbjct: 121 EQDHDRVGTVLPSSTHGQLREANTHNDVYVQPMGRTASSTSVLSALDGQGDSRSDHGAEE 180

Query: 181 GMEESVN----------------RDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLE 240
            + +S+N                RDSSYQRYDIQQ ARWIEQ+LPFS+LLL+VFIRQHL+
Sbjct: 181 SVSQSLNGXXXXXXXXXXXXXXSRDSSYQRYDIQQAARWIEQVLPFSILLLVVFIRQHLQ 240

Query: 241 GFFITIWISAVMYKSNDIVKKQTALKGERRISVLAGTSITFLVHVIGIYWWCHSDDLLYP 300
           GFF+TIWI+AVM+KSN+I++KQTALKGER+ISVL G S  F++HVIG+YWW  +DDLLYP
Sbjct: 241 GFFVTIWIAAVMFKSNEILRKQTALKGERKISVLIGFSFVFMLHVIGVYWWYRNDDLLYP 300

Query: 301 LVMLPPKTVPPFWHALFIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVE 360
           LVMLPPK +PPFWHA+FI++VNDT+VRQ AM LKC LLIYY+N RG N+R+QGQ+LT VE
Sbjct: 301 LVMLPPKAIPPFWHAMFIVMVNDTLVRQIAMVLKCMLLIYYRNSRGRNYRKQGQMLTFVE 360

Query: 361 YTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVTAFKALSQ 420
           Y LLLYRALLP PVWYRFFLNK+ GSLFSSL TGLYLTFKLTSVVEK+QSF  + KA S 
Sbjct: 361 YLLLLYRALLPAPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFASLKAFSH 420

Query: 421 KEVHYGSYATSEQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRA 480
           KE+HYG+YATSEQV+AAGDLCAICQEKM++PILLRCKH+FCEDCVSEWFERERTCPLCRA
Sbjct: 421 KEIHYGAYATSEQVSAAGDLCAICQEKMHSPILLRCKHVFCEDCVSEWFERERTCPLCRA 476

Query: 481 LVKPAELRTFGDGSTSLLFQLF 487
           LVKPA+LR+FGDGSTSL FQLF
Sbjct: 481 LVKPADLRSFGDGSTSLFFQLF 476

The following BLAST results are available for this feature:

BLAST of CsaV3_5G011140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146428.1	3.2e-263	100.00	PREDICTED: RING finger and transmembrane domain-containing protein 1-like [Cucum...	[more]
XP_008456974.1	2.4e-250	94.44	PREDICTED: RING finger and transmembrane domain-containing protein 1-like [Cucum...	[more]
XP_022941654.1	3.1e-234	88.62	RING finger and transmembrane domain-containing protein 2-like [Cucurbita moscha...	[more]
XP_022986350.1	4.0e-234	88.41	E3 ubiquitin-protein ligase RNFT1-like [Cucurbita maxima]	[more]
XP_022146804.1	2.2e-232	89.84	RING finger and transmembrane domain-containing protein 1-like [Momordica charan...	[more]

BLAST of CsaV3_5G011140 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G01960.1	6.8e-151	58.16	RING/U-box superfamily protein	[more]
AT1G65040.2	4.0e-10	33.85	RING/U-box superfamily protein	[more]
AT3G16090.1	1.2e-09	35.79	RING/U-box superfamily protein	[more]
AT2G42350.1	1.1e-07	41.38	RING/U-box superfamily protein	[more]
AT5G05810.1	1.2e-06	39.29	RING/U-box superfamily protein	[more]

BLAST of CsaV3_5G011140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q96EX2\|RNFT2_HUMAN	1.3e-34	29.59	RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens OX=960...	[more]
sp\|Q5M7Z0\|RNFT1_HUMAN	5.0e-34	29.19	E3 ubiquitin-protein ligase RNFT1 OS=Homo sapiens OX=9606 GN=RNFT1 PE=1 SV=2	[more]
sp\|Q9DCN7\|RNFT1_MOUSE	1.9e-33	29.19	E3 ubiquitin-protein ligase RNFT1 OS=Mus musculus OX=10090 GN=Rnft1 PE=2 SV=1	[more]
sp\|Q5RAG4\|RNFT2_PONAB	2.5e-33	29.25	RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii OX=960...	[more]
sp\|Q3UF64\|RNFT2_MOUSE	3.6e-32	28.31	RING finger and transmembrane domain-containing protein 2 OS=Mus musculus OX=100...	[more]

BLAST of CsaV3_5G011140 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C4F3\|A0A1S3C4F3_CUCME	1.6e-250	94.44	RING finger and transmembrane domain-containing protein 1-like OS=Cucumis melo O...	[more]
tr\|M5WZS0\|M5WZS0_PRUPE	7.0e-166	62.73	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G266800 PE=4 SV=1	[more]
tr\|A0A2P6SLU7\|A0A2P6SLU7_ROSCH	2.0e-165	65.33	Putative transcription factor C2H2 family OS=Rosa chinensis OX=74649 GN=RchiOBHm...	[more]
tr\|A0A2R6RWJ9\|A0A2R6RWJ9_ACTCH	1.3e-159	62.32	RING finger and transmembrane domain-containing protein OS=Actinidia chinensis v...	[more]
tr\|A0A2R6RRX3\|A0A2R6RRX3_ACTCH	8.2e-159	59.36	RING finger and transmembrane domain-containing protein OS=Actinidia chinensis v...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017907	Znf_RING_CS
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G011140.1	CsaV3_5G011140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 425..462 e-value: 5.1E-8 score: 42.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 425..463 score: 13.684
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 399..472 e-value: 1.4E-17 score: 64.8
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 423..466 e-value: 4.0E-10 score: 39.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..173
None	No IPR available	PANTHER	PTHR15860:SF6	SUBFAMILY NOT NAMED	coord: 20..486
None	No IPR available	PANTHER	PTHR15860	UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN	coord: 20..486
None	No IPR available	CDD	cd16532	RING-HC_RNFT1_like	coord: 424..463 e-value: 1.09879E-26 score: 100.821
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 418..468
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 440..449

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G011140	CSPI05G11720	Wild cucumber (PI 183967)	cpicucB285
CsaV3_5G011140	Cucsa.143770	Cucumber (Gy14) v1	cgycucB217
CsaV3_5G011140	CmaCh04G010530	Cucurbita maxima (Rimu)	cmacucB0884
CsaV3_5G011140	CmaCh04G000960	Cucurbita maxima (Rimu)	cmacucB0883
CsaV3_5G011140	CmoCh04G000960	Cucurbita moschata (Rifu)	cmocucB0873
CsaV3_5G011140	Cp4.1LG01g07150	Cucurbita pepo (Zucchini)	cpecucB0541
CsaV3_5G011140	Cp4.1LG01g05880	Cucurbita pepo (Zucchini)	cpecucB0542
CsaV3_5G011140	CsGy5G008980	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G011140	Carg00155	Silver-seed gourd	carcucB0708
CsaV3_5G011140	Carg24464	Silver-seed gourd	carcucB0948
CsaV3_5G011140	Cla007314	Watermelon (97103) v1	cucwmB410
CsaV3_5G011140	MELO3C020174	Melon (DHL92) v3.5.1	cucmeB382
CsaV3_5G011140	ClCG07G005290	Watermelon (Charleston Gray)	cucwcgB422
CsaV3_5G011140	Lsi04G010050	Bottle gourd (USVL1VR-Ls)	cuclsiB394
CsaV3_5G011140	MELO3C020174.2	Melon (DHL92) v3.6.1	cucmedB363
CsaV3_5G011140	Bhi07G000398	Wax gourd	cucwgoB524

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G011140	Cucurbita moschata (Rifu)	cmocucB0872
CsaV3_5G011140	Watermelon (97103) v2	cucwmbB381
CsaV3_5G011140	Watermelon (97103) v2	cucwmbB407