Cp4.1LG01g05880 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g05880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ring finger and transmembrane domain-containing protein 2
Location	Cp4.1LG01 : 471537 .. 477280 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCCACTATTTGCCTCTCTCTACGTTTCGCATTCAATTCTCCATTTTTTTTTTCCCAACCTATTTCTTCGTTTCCTTTTTCCTTCCCCAAATTCCCCCGGCGACCCACCTCCCTCCGCCCCCTTCCGACCGGATCACCGCCATTTCCGGCTCCAAACGCCACATTTATTCTTGCCCATCATCCTCTGTTTTTTTTCCTTTCAGGTGGTGGGATTTCGAAGGGGTTGAATCGGTACAGGTTTTGCAAGGAGGGGGAAGGTCGAACATCATTTTGGGCTTTTGCCTTTTGCCTTTTGGTCACTACCAATGGAGACCTCGGCTTCCAATTCTGATCCTTATTCCAATTCTTCTTCACCCACAACTTCTCCTACCTCCTCCAGATTTGGGGTCTCGATCCCTTCGCTCAATTTCTTCCGTTCGCCTCTGTCCGTCATTTTGGATTACTCTGGAATTCTTCCCACTAGGGCTGTTCCTCATGAATCGGAACCTATAATCAACGGCTCTGCCACCCCTGATTTGCGGGTTTATTCTCAAAATCAGAATCACTTGATGACTACCACTTCTTCTTCTTCTTCTTCTTCTAGTAATAGTCCCACCTCCTCCTCCTCCGGTAATACCAGCCCCTCTGGGGAGGTTTCGATTAGGATTATTGGGTCTGGTGAGCAAGATCCTTCTCCGGCTCTGGTTGGACAAGCTGGCTATGAGCAAAATGGTGGACTTCCTGTTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCTTTGGTGTCCACTGCTTCTTCGTCTATTCAATCTGGAAGCAGTCGTGTTTCAGAATCTGGAAATGGCGTGGAAGAGAGTGTTAATAGAGATTCGTCTTATCAGAGATACGATATCCAGCAGGTTGCCAGGTGGATTGAACAGATTCTTCCTTTCTCTTTGCTACTGCTGATAGTCTTTATCCGTCAGCATTTGGAAGGTGCTCTCTTTTGTCCTCTCTTTTGTTGGACCGATTATATTTTTCGATTTTCATTGCCCTTTGCACTTGGCACCACTTTGACGTATTGTTCATTTTCGTTATCGAATTTCATATAGTGCTGGTAGTAACTAGTCCTTGTTAAGATATAATTAAGTGGGAATGCTGGCCATTGTTTACTCAGGACTTCCGTTGTATCTATTAAAATTTCACCCTCGTTAGTTCTTATACCTTTTAGATGACTTACAGCGTGATTGTAGAGGATAATGTTTGATTTGAATACTGGTGTGGTGTGGTAAATTGCCCCGGATGTTTTTTTTTTTTTCCTTTCCGTACTTGAGTACTGAAATTGCATCGCTGTAGCTGTAAAAGCTACTGTAGTATATTGTAGGGTTTCTTGCAAGGCGGTTGTTGTAAGATGTAGTGATAGAATCATCCAAGAATTTGGAGACCAGAGTTTTTTTAAAGCGTTGGAACTATCTTACTATCAAATGCATATAATTTTCAATGAAGAAAAATAACTGGATTAACTTTGTTGACAATTGGGTTCTGCTATTAACACATGTTTTCATGTATTGAAAAATAAATATGCGTTGAAAAGGCAGCTCTCGGGAGTGGGGAGGAAGGTGTTGAGAAAGAATTAGAGGAATACTGTGGAAACAGTTATGTTAGCATCAGATCATTTGGTTTGGAGATGACACTTTGCCATAAATCTTTGGAACATACTTTTGGACACGTTTGTTTGGTAGTCGACATATACATTAATTATCTTCCACTACCTAACCTAATAAGGGAGTTGCATTACACTGTTAGGTGTAATCACAAAGACAAGTAGTGATCATCTTGTAATCTTCTCCCTTTTACTCTCTTGCTGTAACATTCTTCTGATTGGTGAGAATTTATTTGTTTGATATTTCCAGGTTTTTTCATCACAATTTGTATATCAGCTGTTATGTATAAGTCGAACGATATTGTCAAGAAACAGACTGCTCTAAAGGTGGTGTAAGCCTAAACCCAAACTTATCTTATCTATTAGTACCTTATTTCTTTTTCAACTTCACTGAGAATCCACTTGCAAGAAATATACACTGAAGAATTTACTCTCCTTTTCAGGGGGAGAGGAAAATTTCTGTCCTTGCTGGGACATCTATTGCATTTTTGGTTCATGTTATTGGAATTTACTGGTGGTGCCATAGTGATGATCTTCTACACCCGTTAGTCATGCTTCCACCAAAGACAGTACCACCATTTTGGCATGCCTTGTTCATAATCTTAGTTAACGGTACAGATTTTCCCTTGCTTTGGCTTATTAAGTTTCTGTAGATATAATGATTGAATTAACATATGGAATGGAGCTTCAAAAAATGTAAGCAGAAAATTCTTAAGTGTCACAGTGCGATTTCTAATTAGTTAGCTTGAATGGTGATATAACAAGGGCATAAATATGGTTTATTATCTTTGTGTTATCTATATGGATCTTGCAAACATAGTTTTTAAGACAGGATTCAGGATATTGCCAAAAATTGAAAGAATGATATTGTGGTTTTTTCTTTTTCTTTTATTATTATTATTTTTTTAATGGTTCAACCTTCCTCTAATTCCAACTTCTTTGTTGTATTTCTCTCACAATTTTTTGTACAATTTTTCATACACTTGATTTTAATGTTCTCATTCTTTGATTTTGGACTCGATTGTGTTGCCATGCCAGATACGATGGCGAGGCAGGTTGCAATGGCTCTCAAATGTCTTCTTCTTATTTACTACAAGAATGGCAGAGGCCATAATTTTCGCCGGCAGGTATTATGAGATCTCAAATTTAGCTTAATCATATGTTTTGTGTTTATCTTGTATTAACCATTAATATTATTGAAATGTCTGACAATTACTTTGTTTTAGTTCTTTGATTGTTTATAATTCATGTTTCAGGGTCAAATTTTAACTCTCATGGAATACACTCTTCTGTTGTATCGTGCATTATTACCGGCACCTGTATGGTACCGGTTCTTCTTGAACAAAGATCAAGGGAGCCTTTTTTCATCACTGACAACAGGATTGTATTTAACTTTCAAGCTAACGTCTGTTGTTGAGAAGGTATGGTTTAAAACATGAATATTCATACCTTAATAAGCACTAAAAATTTTAATATTATGTCATAGTTCGTGGAAACCAACCTTGTTCATATACTATCTATTTTGTTATTTTCTCTTTAGATTCAATCATTCGTGGCTGCATTTAAGGCTCTATCACAAAAAGAAGTCCATTATGGATCATATGCCACATCAGAACAGGCAAGTATATACATACCTGTCTATTGTAGTCTCTTTCGAAATTTACCATTTTAAAACAGCTTTGTGTTTCTTCTTGCATTTAACTTTACGCATCTGTTTTCACATTCTATTTAATGTATCCCGCAAATAACGAAATAACATGAATATTTGTGGAACCCTTTAAGATGGTTGAATGTCTCCTTTTTTAATGCTTTCTTAATGTTACAAGTCATTCCCTCTATAGTTCATGTTAACGGGATTCCCTCATTACATTCTCATGGATATGTGATACTATTACTAGCCTACAGGATATGGTGGGAGAAGTGACCTAGAATTTTTCTTAGATAAGATAAACCAATTTGTCACTATCTTTCATTGGTGTGGCGACATAACTTTGTACCTTTTGAAGTTACATGATTGACTCTTCTATATGTAACTTTTTTTTTTCTTTCTTTCTCTCTTTCTTTCTTTGCTACTTCCCTTTTATAATTCTGGCTAATTGGATTGATTCATTTTAAATACCTTTTGGTCTTTATTTGGTTGGGTATTGAAATTTTAGTTTTTATGTTAAAAAGCTGCATTTCAATGAAAGTTTTAGGGGGGTACAAGTAAAATTTGCTTTTTTCTTTTATATTTCTGTAGTTACTCGTATCAGGCCGTACATCTTGAGATGCTATTTTTGAGGTGTGCTTTTTTCATTTTTTTGATGCATGAAGAGATAAAAAAAAAAAAAGTATAATCGTGATTTGGCAATTAGCGCCCGTAATTTCCTGCGTGTCACCAACATTGAAGCAGGAAAAGTTCTCGACATTAGTATTGTTATGTACATGATTAGTTGAATATAATCTCTCCTCCCTGATAAATATCTGTCCTGTGATTTCTCTAGCATTGCATGATCTAATAGTAACTTCATGCATTAATTAAATTCCTTCAAGTCTTCCTTATACTTTATTTTACAGGTAAGTGCTGCGGGAGACCTCTGTGCTATTTGCCAGGAGAAGATGAATGCTCCAATCCTGTTACGCTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAATGGTCAGTATGATGACTTCACATCTCTTGTGTTTTCTGAATACTACCAGCATTGCATTACTATATTCATATCAGACCTCCATAGGACCAATATATAGATTATAACAGGGAGACAAGCATTCTAATTTGAACTCTTAGGTACTGTAGTAATTATCTACCTTGTTATGAGCCAAAAAGTCATGCTCTTGGCTGAGAAAAACTGAATTTGTTCATCAGGTATCGAGGAATTAGTTCAGTTTATTTTTAAATTCTTTTACTGGATGGCCTATCATATAAAGTAGAGGTATATAATTTTTAGAGTTTTTTTGCAAATCCAAACACATCACGTTATCATTCCATCCTCATATGTATCTTGTGAATCCTTAGGACTTAACCATGCTGCAGTCATTAATATTAGAAATGATCTCTATGGTCATATCATTCTTATTATTAGTGCAGGGGATTGTCTATGTCTGACTAGTATGGCTACAGCATTTATTTGACTGAGACTATGCTGTGTTGCCCACAGTTTTTTTCATTTACTCCTGCGCACGCACACGACAATGGACCTACTTGTGCGCACAGAGATGAAGGAACCAAAAGAAAAAAGAAAATGAAGAAAGGACAGAACCCCTTGAATCTTGATTAATAGTGGCACGATTCTTTCGACTGGGCATAAGTCTAGTGCTTAGGAATTAGTTTTAGCTCTAACAAATGTCATTGCATTTCCATTTACTGGTTCAAGTACTTGTGTTTTCAGGTTTGAAAGAGAAAGAACTTGCCCTCTCTGCCGGGCGCTGGTAAAGCCAGCAGAACTCCGAACATTTGGCGACGGGTCGACCAGCTTACTCTTCCAGTTGTTTTAGACAACCATTTGACATTTCTGGACGTAACAGCTCTATCAGCTTGACAAAGAAACATATTGTTTATTGGATGGACACAGGGGGGAAGAAAAAGAACAAAGAGAAGGGGAAAGAAGAGAAAAAGAAAAAGGGAAACATAACATAACATCCAGATGAGTTTAAAGATGCTGTCAAATTCAAAACTGGATTAGTATTATATTAATGCTTTGTAATCATTGTGACGAGTTGAGTTAGATGTCCAAACAGAAGATGGATTTAATAAAATCCCATTTCATCATTAAATTCAATGAAATCTAATTCTTAACGAAAAGAATCCCACTGTGAAAACTGCATGTTACTTGAAGACTGATGAGTATTCCCCGTAGAGTTTAGGCCTGGAAACAGCTGCCATGTTGAATGTGTTCAGTCTGCAGTGATTATGTAAACACACAAATAATTGTTGTTCATATACTGTTCTACAGGTTTCAAGTGTGAGGCGTCACCATCTTATGACCTGTTCATACTGTTTCTGAGGCCTTTTTTCTGTGCTCTGAACAGTGAAGTTATGAAATCATCAAAATTGAACTATTTGTTGTAATGATCAAAGCCAAGTAGTATATATGCAACCATTTGTT

mRNA sequence

CCTCCACTATTTGCCTCTCTCTACGTTTCGCATTCAATTCTCCATTTTTTTTTTCCCAACCTATTTCTTCGTTTCCTTTTTCCTTCCCCAAATTCCCCCGGCGACCCACCTCCCTCCGCCCCCTTCCGACCGGATCACCGCCATTTCCGGCTCCAAACGCCACATTTATTCTTGCCCATCATCCTCTGTTTTTTTTCCTTTCAGGTGGTGGGATTTCGAAGGGGTTGAATCGGTACAGGTTTTGCAAGGAGGGGGAAGGTCGAACATCATTTTGGGCTTTTGCCTTTTGCCTTTTGGTCACTACCAATGGAGACCTCGGCTTCCAATTCTGATCCTTATTCCAATTCTTCTTCACCCACAACTTCTCCTACCTCCTCCAGATTTGGGGTCTCGATCCCTTCGCTCAATTTCTTCCGTTCGCCTCTGTCCGTCATTTTGGATTACTCTGGAATTCTTCCCACTAGGGCTGTTCCTCATGAATCGGAACCTATAATCAACGGCTCTGCCACCCCTGATTTGCGGGTTTATTCTCAAAATCAGAATCACTTGATGACTACCACTTCTTCTTCTTCTTCTTCTTCTAGTAATAGTCCCACCTCCTCCTCCTCCGGTAATACCAGCCCCTCTGGGGAGGTTTCGATTAGGATTATTGGGTCTGGTGAGCAAGATCCTTCTCCGGCTCTGGTTGGACAAGCTGGCTATGAGCAAAATGGTGGACTTCCTGTTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCTTTGGTGTCCACTGCTTCTTCGTCTATTCAATCTGGAAGCAGTCGTGTTTCAGAATCTGGAAATGGCGTGGAAGAGAGTGTTAATAGAGATTCGTCTTATCAGAGATACGATATCCAGCAGGTTGCCAGGTGGATTGAACAGATTCTTCCTTTCTCTTTGCTACTGCTGATAGTCTTTATCCGTCAGCATTTGGAAGGTTTTTTCATCACAATTTGTATATCAGCTGTTATGTATAAGTCGAACGATATTGTCAAGAAACAGACTGCTCTAAAGGGGGAGAGGAAAATTTCTGTCCTTGCTGGGACATCTATTGCATTTTTGGTTCATGTTATTGGAATTTACTGGTGGTGCCATAGTGATGATCTTCTACACCCGTTAGTCATGCTTCCACCAAAGACAGTACCACCATTTTGGCATGCCTTGTTCATAATCTTAGTTAACGATACGATGGCGAGGCAGGTTGCAATGGCTCTCAAATGTCTTCTTCTTATTTACTACAAGAATGGCAGAGGCCATAATTTTCGCCGGCAGGGTCAAATTTTAACTCTCATGGAATACACTCTTCTGTTGTATCGTGCATTATTACCGGCACCTGTATGGTACCGGTTCTTCTTGAACAAAGATCAAGGGAGCCTTTTTTCATCACTGACAACAGGATTGTATTTAACTTTCAAGCTAACGTCTGTTGTTGAGAAGATTCAATCATTCGTGGCTGCATTTAAGGCTCTATCACAAAAAGAAGTCCATTATGGATCATATGCCACATCAGAACAGGCAAGTATATACATACCTGTAAGTGCTGCGGGAGACCTCTGTGCTATTTGCCAGGAGAAGATGAATGCTCCAATCCTGTTACGCTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAATGGTTTGAAAGAGAAAGAACTTGCCCTCTCTGCCGGGCGCTGGTAAAGCCAGCAGAACTCCGAACATTTGGCGACGGGTCGACCAGCTTACTCTTCCAGTTGTTTTAGACAACCATTTGACATTTCTGGACGTAACAGCTCTATCAGCTTGACAAAGAAACATATTGTTTATTGGATGGACACAGGGGGGAAGAAAAAGAACAAAGAGAAGGGGAAAGAAGAGAAAAAGAAAAAGGGAAACATAACATAACATCCAGATGAGTTTAAAGATGCTGTCAAATTCAAAACTGGATTAGTATTATATTAATGCTTTGTAATCATTGTGACGAGTTGAGTTAGATGTCCAAACAGAAGATGGATTTAATAAAATCCCATTTCATCATTAAATTCAATGAAATCTAATTCTTAACGAAAAGAATCCCACTGTGAAAACTGCATGTTACTTGAAGACTGATGAGTATTCCCCGTAGAGTTTAGGCCTGGAAACAGCTGCCATGTTGAATGTGTTCAGTCTGCAGTGATTATGTAAACACACAAATAATTGTTGTTCATATACTGTTCTACAGGTTTCAAGTGTGAGGCGTCACCATCTTATGACCTGTTCATACTGTTTCTGAGGCCTTTTTTCTGTGCTCTGAACAGTGAAGTTATGAAATCATCAAAATTGAACTATTTGTTGTAATGATCAAAGCCAAGTAGTATATATGCAACCATTTGTT

Coding sequence (CDS)

ATGGAGACCTCGGCTTCCAATTCTGATCCTTATTCCAATTCTTCTTCACCCACAACTTCTCCTACCTCCTCCAGATTTGGGGTCTCGATCCCTTCGCTCAATTTCTTCCGTTCGCCTCTGTCCGTCATTTTGGATTACTCTGGAATTCTTCCCACTAGGGCTGTTCCTCATGAATCGGAACCTATAATCAACGGCTCTGCCACCCCTGATTTGCGGGTTTATTCTCAAAATCAGAATCACTTGATGACTACCACTTCTTCTTCTTCTTCTTCTTCTAGTAATAGTCCCACCTCCTCCTCCTCCGGTAATACCAGCCCCTCTGGGGAGGTTTCGATTAGGATTATTGGGTCTGGTGAGCAAGATCCTTCTCCGGCTCTGGTTGGACAAGCTGGCTATGAGCAAAATGGTGGACTTCCTGTTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCTTTGGTGTCCACTGCTTCTTCGTCTATTCAATCTGGAAGCAGTCGTGTTTCAGAATCTGGAAATGGCGTGGAAGAGAGTGTTAATAGAGATTCGTCTTATCAGAGATACGATATCCAGCAGGTTGCCAGGTGGATTGAACAGATTCTTCCTTTCTCTTTGCTACTGCTGATAGTCTTTATCCGTCAGCATTTGGAAGGTTTTTTCATCACAATTTGTATATCAGCTGTTATGTATAAGTCGAACGATATTGTCAAGAAACAGACTGCTCTAAAGGGGGAGAGGAAAATTTCTGTCCTTGCTGGGACATCTATTGCATTTTTGGTTCATGTTATTGGAATTTACTGGTGGTGCCATAGTGATGATCTTCTACACCCGTTAGTCATGCTTCCACCAAAGACAGTACCACCATTTTGGCATGCCTTGTTCATAATCTTAGTTAACGATACGATGGCGAGGCAGGTTGCAATGGCTCTCAAATGTCTTCTTCTTATTTACTACAAGAATGGCAGAGGCCATAATTTTCGCCGGCAGGGTCAAATTTTAACTCTCATGGAATACACTCTTCTGTTGTATCGTGCATTATTACCGGCACCTGTATGGTACCGGTTCTTCTTGAACAAAGATCAAGGGAGCCTTTTTTCATCACTGACAACAGGATTGTATTTAACTTTCAAGCTAACGTCTGTTGTTGAGAAGATTCAATCATTCGTGGCTGCATTTAAGGCTCTATCACAAAAAGAAGTCCATTATGGATCATATGCCACATCAGAACAGGCAAGTATATACATACCTGTAAGTGCTGCGGGAGACCTCTGTGCTATTTGCCAGGAGAAGATGAATGCTCCAATCCTGTTACGCTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAATGGTTTGAAAGAGAAAGAACTTGCCCTCTCTGCCGGGCGCTGGTAAAGCCAGCAGAACTCCGAACATTTGGCGACGGGTCGACCAGCTTACTCTTCCAGTTGTTTTAG

Protein sequence

METSASNSDPYSNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESEPIINGSATPDLRVYSQNQNHLMTTTSSSSSSSSNSPTSSSSGNTSPSGEVSIRIIGSGEQDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLHPLVMLPPKTVPPFWHALFIILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPAPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQASIYIPVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF

Homology

[Close]

BLAST of Cp4.1LG01g05880 vs. Swiss-Prot
Match: RNFT2_HUMAN (RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens GN=RNFT2 PE=2 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 2.4e-33
Identity = 91/301 (30.23%), Postives = 164/301 (54.49%), Query Frame = 1


Query: 191 DIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVKKQTALKGERKI 250
           +++ V  W+++ LPF L+LL     QH  G  + I +++    +N  +++Q +LK +R +
Sbjct: 155 ELKAVICWLQKGLPFILILLAKLCFQHKLGIAVCIGMASTFAYANSTLREQVSLKEKRSV 214

Query: 251 SVLAGTSIAFLV-HVIGIYWWCHSDDLLHPLVMLPPK-TVPPFWHALFIILVNDTMARQV 310
            V+    +AFL  + + + +   S  L + L+ L P   +  F+  L+I+ + D + + +
Sbjct: 215 LVILWI-LAFLAGNTLYVLYTFSSQQLYNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYI 274

Query: 311 AMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPAPVWYRFFLNKDQGSLF- 370
            +ALKCL++   K       + +G+   ++E    L+R+L+P  +WY++ +  D  + + 
Sbjct: 275 TIALKCLIVALPKIILA--VKSKGKFYLVIEELSQLFRSLVPIQLWYKYIMGDDSSNSYF 334

Query: 371 -SSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQASIYIPVSAAGDLC 430
              +   LY   K   +  ++     A K L   + +YG  AT +Q       + AGD+C
Sbjct: 335 LGGVLIVLYSLCKSFDICGRVGGVRKALKLLCTSQ-NYGVRATGQQC------TEAGDIC 394

Query: 431 AICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQL 488
           AICQ +   P++L C+H+FCE+C+  W +RERTCPLCR+ V    LR + DG+TS  FQ+
Sbjct: 395 AICQAEFREPLILLCQHVFCEECLCLWLDRERTCPLCRS-VAVDTLRCWKDGATSAHFQV 444

[Close]

BLAST of Cp4.1LG01g05880 vs. Swiss-Prot
Match: RNFT2_PONAB (RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii GN=RNFT2 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.6e-32
Identity = 90/301 (29.90%), Postives = 162/301 (53.82%), Query Frame = 1


Query: 191 DIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVKKQTALKGERKI 250
           +++ V  W+++ LPF L+LL     QH  G  + I +++    +N  +++Q +LK +R +
Sbjct: 155 ELKAVICWLQKGLPFILILLAKLCFQHKLGIAVCIGMASTFAYANSTLREQVSLKEKRSV 214

Query: 251 SVLAGTSIAFLV-HVIGIYWWCHSDDLLHPLVMLPPK-TVPPFWHALFIILVNDTMARQV 310
            V+    +AFL  + + + +   S  L + L+ L P      F+  L+I+ + D + + +
Sbjct: 215 LVILWI-LAFLAGNTLYVLYTFSSQQLYNSLIFLKPNLETLDFFDLLWIVGIADFVLKYI 274

Query: 311 AMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPAPVWYRFFLNKDQGSLF- 370
            +ALKCL++   K       + +G+   ++E    L+R+L+P  +WY++ +  D  + + 
Sbjct: 275 TIALKCLIVALPKIILA--VKSKGKFYLVIEELSQLFRSLVPIQLWYKYIMGDDSSNSYF 334

Query: 371 -SSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQASIYIPVSAAGDLC 430
              +   LY   K   +  ++     A K L   + +YG  AT +Q       + AGD+C
Sbjct: 335 LGGVLIVLYSLCKSFDICGRVGGVRKALKLLCTSQ-NYGVRATGQQC------TEAGDIC 394

Query: 431 AICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQL 488
           AICQ +   P++L C+H+FCE+C+  W +RERTCPL R+ V    LR + DG+TS  FQ+
Sbjct: 395 AICQAEFREPLILLCQHVFCEECLCLWLDRERTCPLSRS-VAVDTLRCWKDGATSAHFQV 444

[Close]

BLAST of Cp4.1LG01g05880 vs. Swiss-Prot
Match: RNFT1_MOUSE (RING finger and transmembrane domain-containing protein 1 OS=Mus musculus GN=Rnft1 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.9e-30
Identity = 87/304 (28.62%), Postives = 150/304 (49.34%), Query Frame = 1


Query: 191 DIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVKKQTALKGERKI 250
           + + + +W+++ LP+ L+L I  + QH+ G  + I +      +N  +  Q  L+ ER  
Sbjct: 103 EFRYLFKWLQKSLPYILILGIKLVMQHITGISLGIGLLTTFMYANKSIVNQVFLR-ERSS 162

Query: 251 SVLAGTSIAFLV-HVIGIYWWCHSDDLLHPLVMLPPKTVP-PFWHALFIILVNDTMARQV 310
            +     + FL    + +Y+  HS  L + L+ L P      FW  L+I+ + D + +  
Sbjct: 163 KLRCAWLLVFLAGSSVLLYYTFHSQSLHYSLIFLNPTLEQLSFWEVLWIVGITDFILKFF 222

Query: 311 AMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPAPVWYRFFLNKDQGSLFS 370
            M LKCL+L+         F+ +G    L+E     YR  +P PVW+R+ ++  +    +
Sbjct: 223 FMGLKCLILLVPSFIMP--FKSKGYWYMLLEELCQYYRIFVPIPVWFRYLISYGEFGNVT 282

Query: 371 SLTTG-----LYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQASIYIPVSAAG 430
           + + G     LYL  KL      +++F    +    +   YG  A+  Q S         
Sbjct: 283 TWSLGILLALLYLILKLLDFFGHLRTFRQVLRVFFTRP-SYGVPASKRQCS------DMD 342

Query: 431 DLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLL 488
            +C ICQ +   P+LL C+HIFCE+C++ WF RE+TCPLCR ++    +  + DG+TS  
Sbjct: 343 GICTICQAEFQKPVLLFCQHIFCEECITLWFNREKTCPLCRTVISEC-INKWKDGATSSH 395

[Close]

BLAST of Cp4.1LG01g05880 vs. Swiss-Prot
Match: RNFT2_MOUSE (RING finger and transmembrane domain-containing protein 2 OS=Mus musculus GN=Rnft2 PE=2 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 2.5e-30
Identity = 94/326 (28.83%), Postives = 167/326 (51.23%), Query Frame = 1


Query: 166 GSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITI 225
           G      S  GV+E     +     +++ V  W+++ LPF L+LL     QH  G  + I
Sbjct: 132 GGDHRGHSEEGVDEQPGTPAPALS-ELKAVISWLQKGLPFILILLAKLCFQHKLGIAVCI 191

Query: 226 CISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLV-HVIGIYWWCHSDDLLHPLVMLP 285
            +++    +N  +++Q +LK +R + V+    +AFL  + + + +   S  L   L+ L 
Sbjct: 192 GMASTFAYANSTLREQVSLKEKRSVLVILWI-LAFLAGNTMYVLYTFSSQQLYSSLIFLK 251

Query: 286 PKTVP-PFWHALFIILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLL 345
           P      F+  L+I+ + D + + + +ALKCL++   K       + +G+   ++E    
Sbjct: 252 PNLETLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILA--VKSKGKFYLVIEELSQ 311

Query: 346 LYRALLPAPVWYRFFLNKDQGSLF--SSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKE 405
           L+R+L+P  +WY++ +  D  + +    +   LY   K   +  ++     A K L   +
Sbjct: 312 LFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGLRKALKLLCTSQ 371

Query: 406 VHYGSYATSEQASIYIPVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCP 465
            +YG  AT +Q +       AG +CAICQ +   P++L C+H+FCE+C+  W +RERTCP
Sbjct: 372 -NYGVRATGQQCT------EAGAVCAICQAEFRDPMILLCQHVFCEECLCLWLDRERTCP 431

Query: 466 LCRALVKPAELRTFGDGSTSLLFQLF 488
           LCR+ V    LR + DG+TS   Q++
Sbjct: 432 LCRS-VAVDTLRCWKDGATSAHLQVY 445

[Close]

BLAST of Cp4.1LG01g05880 vs. Swiss-Prot
Match: RNFT1_DANRE (RING finger and transmembrane domain-containing protein 1 OS=Danio rerio GN=rnft1 PE=2 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 7.3e-30
Identity = 90/329 (27.36%), Postives = 162/329 (49.24%), Query Frame = 1


Query: 166 GSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITI 225
           G S   ES +G  +  + +SS    +++ + RW+++ LPF ++L    + QH  G  + +
Sbjct: 102 GHSHEHESDSGESDLESGESSSSISELRYLLRWLKKSLPFIVILCAKLVIQHALGLAVAV 161

Query: 226 CISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLHPLVMLPP 285
            +       N  ++ Q  L  +R+ ++     + FL     + ++      L+  +    
Sbjct: 162 GLFTTFMYVNKSIQTQVFLH-DRRTNLHCAWLLLFLTSSSLLVFYTFHTQSLYRCLFFAN 221

Query: 286 KTVP--PFWHALFIILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLL 345
            T+    FW  L+ + V + + + + M  KCL+L+         +RR+GQ   L+E    
Sbjct: 222 ATIDYHNFWEVLWSVGVTNFILKFIFMGFKCLILLVPCPLM--TYRRRGQWYMLIEEVGQ 281

Query: 346 LYRALLPAPVWYRFFLNKDQGSLFSSLTTG-----LYLTFKLTSVVEKIQSFVAAFKALS 405
           LY+ + P P+W+R+ ++ D+      LT G     LYL  KL ++     S     +   
Sbjct: 282 LYQVIAPVPLWFRYLVSYDEMDTSVGLTLGILLALLYLIMKLLALYGLSGSLQKTLRTFF 341

Query: 406 QKEVHYGSYATSEQASIYIPVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERER 465
             EV+ G+ A+  Q      +  AGD+C ICQ     P +L C+HIFCE+C+++W  +ER
Sbjct: 342 SPEVN-GAPASPAQ------IREAGDICPICQADFKQPRVLVCQHIFCEECIAQWLNQER 401

Query: 466 TCPLCRALVKPAELRTFGDGSTSLLFQLF 488
           TCPLCR ++   ++  + DG+TS   Q++
Sbjct: 402 TCPLCRTVITD-KVHKWKDGATSAHLQIY 419

[Close]

BLAST of Cp4.1LG01g05880 vs. TrEMBL
Match: M5WZS0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005231mg PE=4 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 1.4e-160
Identity = 318/503 (63.22%), Postives = 380/503 (75.55%), Query Frame = 1


Query: 1   METSASNSDPYSNSSSPTTSPTSSRFG-VSIPSLNFFRSPLSVILDYSGILPTRAVPHES 60
           ME S  N+ P S  ++   S +++ FG +  P+L FF+SPLS +LDYSGIL   +  HE+
Sbjct: 1   MEASPGNTSPTSGGNTGNNSNSTTSFGSMQFPALRFFQSPLSFVLDYSGILSPSSSRHEA 60

Query: 61  E-PIINGSATPDLRVYSQNQNHLMTTTSSSSSSSSNSPTSSSSGNTSPSGEVSIRIIGSG 120
           + P++N     D R +S          S+ +S SSN+            GEVSIRIIG+G
Sbjct: 61  DAPVVNAVVVADSRPHSP---------SACTSGSSNT------------GEVSIRIIGAG 120

Query: 121 EQDP---SPALVGQAGYEQNGGLPVSGDQPESPDE-----------ERVPLVSTASSSIQ 180
           EQ+      A V   G    G L  SG + +S D            ERVPLV    SS +
Sbjct: 121 EQEDRGNGAATVPFHGDGNGGSLGHSG-RVQSLDNLAGTVNGVGSGERVPLVPP--SSPE 180

Query: 181 SGSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFIT 240
            G   V ++G+GV+ + +RDS+YQRYDIQQ+ARWIEQ+LPFSLLLL+VFIRQHL+GFF+T
Sbjct: 181 HGRD-VGDTGDGVDNN-SRDSAYQRYDIQQIARWIEQVLPFSLLLLVVFIRQHLQGFFVT 240

Query: 241 ICISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLHPLVMLP 300
           I +SAVMY+SND+V+KQTALKG+RKI VL   + AF++HV+G+YWW  SDDLL+PL MLP
Sbjct: 241 IWVSAVMYRSNDVVRKQTALKGDRKIPVLLSIAAAFMLHVVGVYWWYRSDDLLYPLAMLP 300

Query: 301 PKTVPPFWHALFIILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLL 360
           PK +PPFWHA+FIILVNDTM RQ  MALKCLLLIYYKNGRGHN+RRQGQILT++EYTLLL
Sbjct: 301 PKAIPPFWHAIFIILVNDTMVRQATMALKCLLLIYYKNGRGHNYRRQGQILTVVEYTLLL 360

Query: 361 YRALLPAPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHY 420
           YRALLPAPVWYRFFLNKD GSLFSSLTTGLYLTFKLTSVVEK+QSF A+ +ALS+K++HY
Sbjct: 361 YRALLPAPVWYRFFLNKDNGSLFSSLTTGLYLTFKLTSVVEKVQSFFASIRALSRKDIHY 420

Query: 421 GSYATSEQASIYIPVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCR 480
           G+YAT EQ      V+AAGDLCAICQEKM+APILLRCKHIFCEDCVSEWFERERTCPLCR
Sbjct: 421 GAYATLEQ------VNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCR 471

Query: 481 ALVKPAELRTFGDGSTSLLFQLF 488
           ALVKPA+LRTFGDGSTSL FQ F
Sbjct: 481 ALVKPADLRTFGDGSTSLFFQFF 471

[Close]

BLAST of Cp4.1LG01g05880 vs. TrEMBL
Match: A0A151SG05_CAJCA (Ring finger and transmembrane domain-containing protein 2 OS=Cajanus cajan GN=KK1_024348 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 2.1e-153
Identity = 313/493 (63.49%), Postives = 369/493 (74.85%), Query Frame = 1


Query: 1   METSASNSDPYSNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           ME+S S+S   S+S S T     + FG+S P    FRSPLS+++DY       A    +E
Sbjct: 1   MESSPSSSSSSSSSGSETGGGAVTWFGMSFP----FRSPLSLVMDYC------AREDSAE 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTSSSSSSSSNSPTSSSSGNTSPSGEVSIRIIGSGEQ 120
           P+I     P  R   Q Q    + ++S+S+S+S S + S     S + EV+IRIIG+GEQ
Sbjct: 61  PVI---IIPRTRPRFQAQPESASASASASASASASASDSDENACSGAEEVAIRIIGAGEQ 120

Query: 121 D---PSPALVGQAGYEQN---GGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESG 180
           +   PS +   +AG E+        +S +      EERVPLVS        G  R S S 
Sbjct: 121 ESGSPSSSRGREAGCEEEVIGRSAMLSSEARRRMAEERVPLVSLDDGI---GGGRDSSS- 180

Query: 181 NGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKS 240
                S +  S+YQRYDIQQVA+WIEQILPFSLLLLIVFIRQHL+GFF+TICISAVM+KS
Sbjct: 181 -----SSSSSSTYQRYDIQQVAKWIEQILPFSLLLLIVFIRQHLQGFFVTICISAVMFKS 240

Query: 241 NDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLHPLVMLPPKTVPPFWHA 300
           N+IVKKQTALKG+RK+S+L G S AF++HVI IYWW  +DDLL+PL MLPPK+ PPFWH 
Sbjct: 241 NEIVKKQTALKGDRKVSILIGISFAFMLHVICIYWWYRNDDLLYPLAMLPPKSTPPFWHT 300

Query: 301 LFIILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPAPVW 360
           +FIILVNDT+ RQ AMA KC+LLIYYKNGRGHNFRRQGQ+LTL+EYTLLLYRALLP PVW
Sbjct: 301 IFIILVNDTLVRQAAMASKCVLLIYYKNGRGHNFRRQGQMLTLVEYTLLLYRALLPTPVW 360

Query: 361 YRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQAS 420
           YRFFLNK+ GSLFSSLTTGLYLTFKLTSVVEK+Q FV+A KALS+KEVHYG YAT+EQ  
Sbjct: 361 YRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQCFVSALKALSKKEVHYGVYATTEQ-- 420

Query: 421 IYIPVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRT 480
               V+AAGD+CAICQEKM APILL CKH+FCE+CVSEWFERERTCPLCRALVKPA+LRT
Sbjct: 421 ----VNAAGDMCAICQEKMQAPILLSCKHMFCEECVSEWFERERTCPLCRALVKPADLRT 465

Query: 481 FGDGSTSLLFQLF 488
           FGDGSTSL FQLF
Sbjct: 481 FGDGSTSLFFQLF 465

[Close]

BLAST of Cp4.1LG01g05880 vs. TrEMBL
Match: M5WHB2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005202mg PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 3.1e-152
Identity = 300/502 (59.76%), Postives = 364/502 (72.51%), Query Frame = 1


Query: 1   METSASNSDPYSNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           ME    N D +  +S    + +S R+G+ + + N  ++PLS +L+YSG+L  R+   E+E
Sbjct: 1   MEVPGGNLDSFRAASG---NSSSRRYGM-LSASNIIQAPLSALLEYSGLLRGRSNHQEAE 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTSSSSSSSSNSPTSSSSGNTSPSGEVSIRIIGSGEQ 120
            +ING +    R +  +Q                SPT      TS  GEVSIRIIG+GEQ
Sbjct: 61  SLINGRSAAAFRDHHHSQ-------------LDQSPT------TSNDGEVSIRIIGAGEQ 120

Query: 121 DPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEES 180
           +      G     Q   + V  ++  +P    V  VS  +   Q+       SG G+ +S
Sbjct: 121 EHDREGAGLV-VGQLREVTVPPNEVSAPPMAGVASVSLTTEEGQTDGRTDRSSGEGMPQS 180

Query: 181 VN---------------RDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITI 240
           +N               RDSSYQRYDIQQ ARWIEQ+LPFSLLLL+VFIRQHL+GFF+TI
Sbjct: 181 LNGSADGEGVDGAGSNGRDSSYQRYDIQQAARWIEQVLPFSLLLLVVFIRQHLQGFFVTI 240

Query: 241 CISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLHPLVMLPP 300
            I+AVM+KSNDI++KQTALKGERK++VL G S+AF +HV+G+YWW  +DDLL+PL+MLPP
Sbjct: 241 WIAAVMFKSNDILRKQTALKGERKVAVLIGISLAFALHVVGVYWWYQNDDLLYPLIMLPP 300

Query: 301 KTVPPFWHALFIILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLY 360
           K +PPFWHA+FII+VNDT+ RQ AM LKC+LLIYYKN RG N+R+QGQ+LTL+EY LLLY
Sbjct: 301 KLIPPFWHAVFIIMVNDTLVRQAAMVLKCILLIYYKNSRGRNYRKQGQMLTLLEYLLLLY 360

Query: 361 RALLPAPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYG 420
           RALLP PVWYRFFLNK+ GSLFSSL TGLYLTFKLTSVVEK+QSF AA KALS+KEVHYG
Sbjct: 361 RALLPTPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYG 420

Query: 421 SYATSEQASIYIPVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRA 480
           +YATSEQ      V+AAGDLCAICQEKM+APILLRCKHIFCEDCVSEWFERERTCPLCRA
Sbjct: 421 AYATSEQ------VNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRA 472

Query: 481 LVKPAELRTFGDGSTSLLFQLF 488
           LVKPA+LR+FGDGSTSL FQLF
Sbjct: 481 LVKPADLRSFGDGSTSLFFQLF 472

[Close]

BLAST of Cp4.1LG01g05880 vs. TrEMBL
Match: W9S1M8_9ROSA (RING finger and transmembrane domain-containing protein 2 OS=Morus notabilis GN=L484_017116 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 3.1e-152
Identity = 312/521 (59.88%), Postives = 371/521 (71.21%), Query Frame = 1


Query: 1   METSASNSDPYSNSSSPTTSP--------TSSRFGVS---IPSLNFFRSPLSVILDYSGI 60
           ME S + SDPY+N S  T            SSR G+    IP+LN  +SPLS +L+YSGI
Sbjct: 1   MEASGNASDPYANLSPNTRGGGIGGVGVGDSSRRGLGMLQIPALNILQSPLSFVLEYSGI 60

Query: 61  LPTRAVPHESEPII--NGSATPDLRVYSQNQNHLMTTTSSSSSSSSNSPTSSSSGNTSPS 120
           +P R+   E + ++  NG A                  +  S   S    + +SG+   S
Sbjct: 61  VPARSAQREGDGVVAVNGGAV----------------AAPDSPRISVENCAGTSGSGGDS 120

Query: 121 GEVSIRIIGSGEQDPSPALV---------GQAGYEQNGGL---PVSGDQPESP------- 180
            EVSIRIIG GEQ+   A           G A  +  GGL     S DQP S        
Sbjct: 121 AEVSIRIIGGGEQEERSAQSRGNDGGGGEGCANGDGGGGLLRMSASDDQPSSARSDVVAA 180

Query: 181 --DEERVPLVSTASSSIQSGSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFS 240
             + ER PLV ++ S+   G+           +  N DSSYQ YDI Q+A+WIEQILPFS
Sbjct: 181 AAEGERTPLVPSSPSAAVPGNP----------QQQNDDSSYQSYDIHQIAKWIEQILPFS 240

Query: 241 LLLLIVFIRQHLEGFFITICISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIG 300
           +LLL+VFIRQHL+GFF+TI ISAVMYKSNDIV++QT+LKGERK  +LAG  IAF++HV+G
Sbjct: 241 ILLLVVFIRQHLQGFFVTIWISAVMYKSNDIVRRQTSLKGERKSFILAGIFIAFMLHVVG 300

Query: 301 IYWWCHSDDLLHPLVMLPPKTVPPFWHALFIILVNDTMARQVAMALKCLLLIYYKNGRGH 360
           IYWW  +DDLL+PL MLPPK+VPPFWHA+FI+LVNDT+ RQ AMA+KCL+LIYYKNGRG+
Sbjct: 301 IYWWFRNDDLLYPLAMLPPKSVPPFWHAVFIVLVNDTLMRQAAMAVKCLVLIYYKNGRGY 360

Query: 361 NFRRQGQILTLMEYTLLLYRALLPAPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEK 420
           NFRRQGQ+LTL+EYTLLLYRA+LP PVWYRFFLNKD GSLFSSLTTGLYLTFKLTSVVEK
Sbjct: 361 NFRRQGQMLTLIEYTLLLYRAMLPTPVWYRFFLNKDNGSLFSSLTTGLYLTFKLTSVVEK 420

Query: 421 IQSFVAAFKALSQKEVHYGSYATSEQASIYIPVSAAGDLCAICQEKMNAPILLRCKHIFC 480
           +QSF++A KALS++EV+YGS AT EQ      VS AGDLCAICQEKM++PILLRCKHIFC
Sbjct: 421 VQSFLSAAKALSRREVNYGSRATPEQ------VSVAGDLCAICQEKMHSPILLRCKHIFC 480

Query: 481 EDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 488
           EDCVSEWFERERTCPLCRALVKP +LRTFGDGST+LLFQLF
Sbjct: 481 EDCVSEWFERERTCPLCRALVKPPDLRTFGDGSTNLLFQLF 489

[Close]

BLAST of Cp4.1LG01g05880 vs. TrEMBL
Match: A0A067JDD7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00624 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 4.0e-152
Identity = 299/501 (59.68%), Postives = 375/501 (74.85%), Query Frame = 1


Query: 1   METSASNSDPYSNSS--SPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGIL--PTRAVP 60
           ME S SNSD Y  SS  S T+S  S R+G+ + + +  ++P+S +L+YSG+L   TR+  
Sbjct: 12  MEASGSNSDTYRGSSGGSSTSSSNSRRYGM-LSASSIIQAPISALLEYSGLLRTATRSTH 71

Query: 61  HESEPIINGSATPDLRVYSQNQNHLMTTTSSSSSSSSNSPTSSSSGNTSPSGEVSIRIIG 120
            E++P+I GS         QN + L  +T+S++++               +GEV+IRIIG
Sbjct: 72  QETDPLITGSGG------IQNNHRLDDSTASAAAN---------------NGEVAIRIIG 131

Query: 121 SGE----QDPSPALVGQAGYEQNGGLP------VSGDQPESPDEERVPLVSTASSSIQSG 180
           +GE    ++ S  +VGQ G +    +        S  Q +S ++      +T   S  SG
Sbjct: 132 AGEHEHDREGSGLVVGQLGAQSEVSVQQPMPGMASDVQGDSRNDRGTGEGATQQPSNASG 191

Query: 181 SSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIC 240
               ++ G+G      RDSSYQRYDIQQ ARWIEQ+LPFSLLLL+VFIRQHL+GFF+TI 
Sbjct: 192 DGEAAD-GSGAN---GRDSSYQRYDIQQAARWIEQVLPFSLLLLVVFIRQHLQGFFVTIW 251

Query: 241 ISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLHPLVMLPPK 300
           I+ VM+KSNDI++KQTALKGERKISVL G S+AF +HV+G+YWW  +DDLL+PL+MLPPK
Sbjct: 252 IAVVMFKSNDILRKQTALKGERKISVLIGISLAFTLHVVGVYWWYQNDDLLYPLIMLPPK 311

Query: 301 TVPPFWHALFIILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYR 360
           ++PPFWHA+FII+VNDT+ RQ AM  KC+LL+YYKN RG N+R+QGQ+LTL+EY +LLYR
Sbjct: 312 SIPPFWHAIFIIMVNDTLVRQAAMVFKCILLMYYKNSRGRNYRKQGQMLTLVEYLMLLYR 371

Query: 361 ALLPAPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGS 420
           ALLP PVWYRFFLNK+ GSLFSSL TGLYLTFKLTSVVEK+QSF AA KALS+KEVHYG+
Sbjct: 372 ALLPTPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGA 431

Query: 421 YATSEQASIYIPVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRAL 480
           YATSEQ      V+AAGDLCAICQEKM+APILLRCKHIFCEDCVSEWFERERTCPLCRAL
Sbjct: 432 YATSEQ------VNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRAL 480

Query: 481 VKPAELRTFGDGSTSLLFQLF 488
           VKPA+L++FGDGST+L FQ+F
Sbjct: 492 VKPADLKSFGDGSTTLFFQIF 480

[Close]

BLAST of Cp4.1LG01g05880 vs. TAIR10
Match: AT5G01960.1 (AT5G01960.1 RING/U-box superfamily protein)

HSP 1 Score: 500.7 bits (1288), Expect = 9.9e-142
Identity = 276/488 (56.56%), Postives = 333/488 (68.24%), Query Frame = 1


Query: 1   METSASNSDPYSNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVP-HES 60
           MET  ++ D +  S    +  ++S         N  ++P+S +L+YSG+   R  P HE+
Sbjct: 1   METPGASHDSFRGSPRRNSILSAS---------NIIQAPISTLLEYSGLFRARPSPSHEA 60

Query: 61  EPIINGSATPDLRVYSQNQNHLMTTTSSSSSSSSNSPTSSSSGNTSPSGEVSIRIIGSGE 120
                                  T  S  SS  SN             GEV+IRIIG+ E
Sbjct: 61  ----------------------ETLVSDDSSGLSN-------------GEVAIRIIGNTE 120

Query: 121 QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEE 180
           QD   A        + G   + G      D                G+S+ +       +
Sbjct: 121 QD---AETDTNALREPGHSELLGSSATQVDP---------MGGASEGASQAAPGDPAAGD 180

Query: 181 SVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVK 240
           + +RDS YQRYDIQQ ARWIEQILPFSLLLL+VFIRQHL+GFF+ I I+AVM+KSNDI+K
Sbjct: 181 AASRDSPYQRYDIQQAARWIEQILPFSLLLLVVFIRQHLQGFFVAIWIAAVMFKSNDILK 240

Query: 241 KQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLHPLVMLPPKTVPPFWHALFIIL 300
           KQTALKGER IS L G S+AF  HV+G+YWW   DDLL+PL+MLPPK++PPFWHA+FII+
Sbjct: 241 KQTALKGERHISALIGISVAFTAHVVGVYWWFRKDDLLYPLIMLPPKSIPPFWHAIFIIV 300

Query: 301 VNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPAPVWYRFFL 360
           VNDT+ RQ +M  KC LL+YYKN RG N+R+QGQ+LTL+EY +LLYR+LLP PVWYRFFL
Sbjct: 301 VNDTLVRQASMIFKCFLLMYYKNSRGRNYRKQGQLLTLVEYFMLLYRSLLPTPVWYRFFL 360

Query: 361 NKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQASIYIPV 420
           NKD GSLFSSL TGLYLTFKLTSVVEK+QSF  A KALS+KEVHYGSYAT+EQ      V
Sbjct: 361 NKDYGSLFSSLMTGLYLTFKLTSVVEKVQSFFTALKALSRKEVHYGSYATTEQ------V 420

Query: 421 SAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGS 480
           +AAGDLCAICQEKM+ PILLRCKH+FCEDCVSEWFERERTCPLCRALVKPA+L++FGDGS
Sbjct: 421 NAAGDLCAICQEKMHTPILLRCKHMFCEDCVSEWFERERTCPLCRALVKPADLKSFGDGS 426

Query: 481 TSLLFQLF 488
           TSL FQ+F
Sbjct: 481 TSLFFQIF 426

[Close]

BLAST of Cp4.1LG01g05880 vs. TAIR10
Match: AT3G16090.1 (AT3G16090.1 RING/U-box superfamily protein)

HSP 1 Score: 57.8 bits (138), Expect = 2.2e-08
Identity = 25/56 (44.64%), Postives = 34/56 (60.71%), Query Frame = 1


Query: 419 VSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRT 475
           ++A+   C IC+E+M     L C H+F   C+  W ER++TCP CRALV P E  T
Sbjct: 285 LTASDATCIICREEMTNAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENAT 340

[Close]

BLAST of Cp4.1LG01g05880 vs. TAIR10
Match: AT1G65040.2 (AT1G65040.2 RING/U-box superfamily protein)

HSP 1 Score: 57.4 bits (137), Expect = 2.9e-08
Identity = 45/136 (33.09%), Postives = 64/136 (47.06%), Query Frame = 1


Query: 340 YTLLLYRALLPAPVWYRFFLNKDQG-SLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALS 399
           + L L R LL   ++  FFL       L   L   LY TF+   +  ++  ++   K  S
Sbjct: 214 FYLELVRDLLHLSMYLCFFLMIFMNYGLPLHLIRELYETFRNFKI--RVTDYLRYRKITS 273

Query: 400 QKEVHYGSYATSEQASIYIPVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERER 459
                +   AT E+      +S+    C IC+E+M +   L C H+F   C+  W ER+ 
Sbjct: 274 NMNDRFPD-ATPEE------LSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQN 333

Query: 460 TCPLCRALVKPAELRT 475
           TCP CRALV PAE  T
Sbjct: 334 TCPTCRALVVPAENAT 340

[Close]

BLAST of Cp4.1LG01g05880 vs. TAIR10
Match: AT2G42350.1 (AT2G42350.1 RING/U-box superfamily protein)

HSP 1 Score: 54.7 bits (130), Expect = 1.9e-07
Identity = 24/56 (42.86%), Postives = 32/56 (57.14%), Query Frame = 1


Query: 422 AGDLCAIC----QEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELR 474
           AG  CA+C    +EK NA +L  CKH+F   CV  W   + TCP+CR   +P+  R
Sbjct: 96  AGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPR 151

[Close]

BLAST of Cp4.1LG01g05880 vs. TAIR10
Match: AT3G62690.1 (AT3G62690.1 AtL5)

HSP 1 Score: 51.6 bits (122), Expect = 1.6e-06
Identity = 20/50 (40.00%), Postives = 30/50 (60.00%), Query Frame = 1


Query: 426 CAIC----QEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAE 472
           C++C    +E     +L +C H+F  DC+  WF    +CPLCRA V+PA+
Sbjct: 113 CSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQ 162

[Close]

BLAST of Cp4.1LG01g05880 vs. NCBI nr
Match: gi|659114254|ref|XP_008456974.1| (PREDICTED: RING finger and transmembrane domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 821.2 bits (2120), Expect = 9.3e-235
Identity = 436/490 (88.98%), Postives = 454/490 (92.65%), Query Frame = 1


Query: 1   METSASNSDPYSNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           METS+SNSDPYSNSSSPTT+ TSSRFG+S+PSLNFFRSPLSVILDYSGILPTRAV  ES+
Sbjct: 1   METSSSNSDPYSNSSSPTTARTSSRFGLSLPSLNFFRSPLSVILDYSGILPTRAVRDESD 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTSSSSSSSSNSPTSSSSGNTSPSGEVSIRIIGSGEQ 120
           P+IN +ATPDLR +SQNQNHL+ T+SSSSS       ++SS NT PSGEVSIRIIGSGEQ
Sbjct: 61  PVINAAATPDLRGFSQNQNHLIPTSSSSSS------VTTSSANTIPSGEVSIRIIGSGEQ 120

Query: 121 DPSPA--LVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVS-ESGNGV 180
           DPSP+  L  Q GYEQNG LPVSGDQPESPDEERVPLVSTASSSIQSG SRV  ESGNG+
Sbjct: 121 DPSPSALLPNQVGYEQNGRLPVSGDQPESPDEERVPLVSTASSSIQSGGSRVDGESGNGM 180

Query: 181 EESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDI 240
           EESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITI ISAVMYKSNDI
Sbjct: 181 EESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSNDI 240

Query: 241 VKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLHPLVMLPPKTVPPFWHALFI 300
           VKKQTALKGERKISVLAGTSI FLVHVIGIYWWCHSDDLL+PLVMLPPKTVPPFWHALFI
Sbjct: 241 VKKQTALKGERKISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFI 300

Query: 301 ILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPAPVWYRF 360
           ILVNDTM RQ AMALKC LLIYYKNGRGHNFRRQGQILTL+EYTLLLYRALLP PVWYRF
Sbjct: 301 ILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRF 360

Query: 361 FLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQASIYI 420
           FLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALS+KEVHYGSYATSEQ     
Sbjct: 361 FLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQ----- 420

Query: 421 PVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGD 480
            V+AAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGD
Sbjct: 421 -VNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGD 478

Query: 481 GSTSLLFQLF 488
           GSTSLLFQLF
Sbjct: 481 GSTSLLFQLF 478

[Close]

BLAST of Cp4.1LG01g05880 vs. NCBI nr
Match: gi|449457383|ref|XP_004146428.1| (PREDICTED: RING finger and transmembrane domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 812.8 bits (2098), Expect = 3.3e-232
Identity = 433/492 (88.01%), Postives = 451/492 (91.67%), Query Frame = 1


Query: 1   METSASNSDPYSNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           METS SNSDPYSNSSSPTT+ +SSRF +S+PSLNFFRSPLSVILDYSGILPTRAV HES+
Sbjct: 1   METSPSNSDPYSNSSSPTTARSSSRFALSLPSLNFFRSPLSVILDYSGILPTRAVRHESD 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTSSSSSSSS--NSPTSSSSGNTSPSGEVSIRIIGSG 120
           P+IN +ATPDLRV+SQNQNHL+ T+S SSS SS   S  ++SS NT PSGEVSIRIIGSG
Sbjct: 61  PVINAAATPDLRVFSQNQNHLIHTSSPSSSPSSVTTSSVTTSSANTIPSGEVSIRIIGSG 120

Query: 121 EQDPSPA--LVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVS-ESGN 180
           EQDPSP   L  Q  YEQNG LPVSGDQPESPDEERVPLVST SSSIQ G +RV  ESGN
Sbjct: 121 EQDPSPRALLPNQVVYEQNGRLPVSGDQPESPDEERVPLVSTTSSSIQPGGTRVDGESGN 180

Query: 181 GVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSN 240
           G+EESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITI ISAVMYKSN
Sbjct: 181 GMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSN 240

Query: 241 DIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLHPLVMLPPKTVPPFWHAL 300
           DIVKKQTALKGER+ISVLAGTSI FLVHVIGIYWWCHSDDLL+PLVMLPPKTVPPFWHAL
Sbjct: 241 DIVKKQTALKGERRISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHAL 300

Query: 301 FIILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPAPVWY 360
           FIILVNDTM RQ AMALKC LLIYYKNGRGHNFRRQGQILTL+EYTLLLYRALLP PVWY
Sbjct: 301 FIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWY 360

Query: 361 RFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQASI 420
           RFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFV AFKALSQKEVHYGSYATSEQ   
Sbjct: 361 RFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYATSEQ--- 420

Query: 421 YIPVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTF 480
              V+AAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTF
Sbjct: 421 ---VNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTF 480

Query: 481 GDGSTSLLFQLF 488
           GDGSTSLLFQLF
Sbjct: 481 GDGSTSLLFQLF 486

[Close]

BLAST of Cp4.1LG01g05880 vs. NCBI nr
Match: gi|694373140|ref|XP_009363774.1| (PREDICTED: RING finger and transmembrane domain-containing protein 2-like [Pyrus x bretschneideri])

HSP 1 Score: 578.9 bits (1491), Expect = 8.1e-162
Identity = 315/499 (63.13%), Postives = 384/499 (76.95%), Query Frame = 1


Query: 1   METSASNSDPYSNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           ME S+ N  P +  ++   S TSS   +  P+L FF+SPLS +LDYSGIL   +   +S+
Sbjct: 1   MEASSGNGSPATGGATGVGSNTSSFGSMQFPALRFFQSPLSFVLDYSGILSPSSSRRDSD 60

Query: 61  -PIINGSATPDLRVYSQNQNHLMTTTSSSSSSSSNSPTSSSSGNTSPSGEVSIRIIGSGE 120
            P++N     D                    S  +SPT+ +SG+++ +GEVSIRIIG+GE
Sbjct: 61  APVVNAVVVAD--------------------SQPHSPTACTSGSSN-TGEVSIRIIGAGE 120

Query: 121 QDP---SPALVGQAGYEQNGGLP--------VSGDQPESPDEERVPLVSTASSSIQSGSS 180
           Q+      A V   G E+N G P        ++G       +ERVPLV+++S +      
Sbjct: 121 QEDRGNGGATVPVQG-EENDGSPGRVQSLDDLAGTVNGVGSDERVPLVASSSPT------ 180

Query: 181 RVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICIS 240
              ++GNG E+S +RDS+YQRYDIQQ+ARWIEQILPFSLLLL+VFIRQHL+GFF+TI +S
Sbjct: 181 HAGDTGNGAEDS-SRDSAYQRYDIQQIARWIEQILPFSLLLLVVFIRQHLQGFFVTIWVS 240

Query: 241 AVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLHPLVMLPPKTV 300
           AVMY+SND+VKKQT+LKG+RKISVL   + AF++HV+ +YWW  SDDLL+PL MLPPKT+
Sbjct: 241 AVMYRSNDVVKKQTSLKGDRKISVLVSIAGAFMLHVVVVYWWYRSDDLLYPLAMLPPKTI 300

Query: 301 PPFWHALFIILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRAL 360
           PPFWHA+FIILVNDTM RQ AMA KCLLLIYYKNGRGHN+RRQGQ+LT++EYTLLLYRAL
Sbjct: 301 PPFWHAIFIILVNDTMVRQAAMAFKCLLLIYYKNGRGHNYRRQGQMLTVIEYTLLLYRAL 360

Query: 361 LPAPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYA 420
           LPAPVWYRFFLNKD GSLFSSLTTGLYLTFKLTSVVEK+QSF+A+ +ALS+K++HYGS+A
Sbjct: 361 LPAPVWYRFFLNKDNGSLFSSLTTGLYLTFKLTSVVEKVQSFLASIRALSRKDIHYGSHA 420

Query: 421 TSEQASIYIPVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVK 480
           T EQ      V+AAGDLCAICQEKM+APILLRCKHIFCEDCVSEWFERERTCPLCRALVK
Sbjct: 421 TLEQ------VNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVK 464

Query: 481 PAELRTFGDGSTSLLFQLF 488
           PA+LRT+GDGSTSL+FQLF
Sbjct: 481 PADLRTYGDGSTSLIFQLF 464

[Close]

BLAST of Cp4.1LG01g05880 vs. NCBI nr
Match: gi|645256886|ref|XP_008234157.1| (PREDICTED: RING finger and transmembrane domain-containing protein 2-like [Prunus mume])

HSP 1 Score: 576.6 bits (1485), Expect = 4.0e-161
Identity = 319/503 (63.42%), Postives = 381/503 (75.75%), Query Frame = 1


Query: 1   METSASNSDPYSNSSSPTTSPTSSRFG-VSIPSLNFFRSPLSVILDYSGILPTRAVPHES 60
           ME S  N+ P S  ++   S +++ FG +  P+L FF+SPLS +LDYSGIL   +  HE+
Sbjct: 1   MEASPGNTSPTSGGNTGNNSNSTTSFGSMQFPALRFFQSPLSFVLDYSGILSPSSSRHEA 60

Query: 61  E-PIINGSATPDLRVYSQNQNHLMTTTSSSSSSSSNSPTSSSSGNTSPSGEVSIRIIGSG 120
           + P++N     D R +S          S+ +S SSN+            GEVSIRIIG+G
Sbjct: 61  DAPVVNAVVVADSRPHSP---------SACTSGSSNT------------GEVSIRIIGAG 120

Query: 121 EQDP---SPALVGQAGYEQNGGLPVSGDQPESPDE-----------ERVPLVSTASSSIQ 180
           EQ+      A V   G    G L  SG + +S D            ERVPLV    SS +
Sbjct: 121 EQEDRGNGAATVPFHGDGNGGSLGHSG-RVQSLDNLAGTVNGVGSGERVPLVPP--SSPE 180

Query: 181 SGSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFIT 240
            G   V ++G+GV+ + +RDS+YQRYDIQQ+ARWIEQ+LPFSLLLL+VFIRQHL+GFF+T
Sbjct: 181 HGRD-VGDTGDGVDNN-SRDSAYQRYDIQQIARWIEQVLPFSLLLLVVFIRQHLQGFFVT 240

Query: 241 ICISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLHPLVMLP 300
           I +SAVMY+SND+V+KQTALKG+RKI VL G + AF++HV+G+YWW  SDDLL+PL MLP
Sbjct: 241 IWVSAVMYRSNDVVRKQTALKGDRKIPVLLGIAAAFMLHVVGVYWWYRSDDLLYPLAMLP 300

Query: 301 PKTVPPFWHALFIILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLL 360
           PK +PPFWHA+FIILVNDTM RQ  MALKCLLLIYYKNGRGHN+RRQGQILT++EYTLLL
Sbjct: 301 PKAIPPFWHAIFIILVNDTMVRQATMALKCLLLIYYKNGRGHNYRRQGQILTVVEYTLLL 360

Query: 361 YRALLPAPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHY 420
           YRALLPAPVWYRFFLNKD GSLFSSLTTGLYLTFKLTSVVEK+QSF A+ +ALS+K++HY
Sbjct: 361 YRALLPAPVWYRFFLNKDNGSLFSSLTTGLYLTFKLTSVVEKVQSFFASIRALSRKDIHY 420

Query: 421 GSYATSEQASIYIPVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCR 480
           G+YAT EQ      V+AAGDLCAICQEKM+APILLRCKHIFCEDCVSEWFERERTCPLCR
Sbjct: 421 GAYATLEQ------VNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCR 471

Query: 481 ALVKPAELRTFGDGSTSLLFQLF 488
           ALVKPA+LRTFGDGSTSL FQ F
Sbjct: 481 ALVKPADLRTFGDGSTSLFFQFF 471

[Close]

BLAST of Cp4.1LG01g05880 vs. NCBI nr
Match: gi|595999086|ref|XP_007217960.1| (hypothetical protein PRUPE_ppa005231mg [Prunus persica])

HSP 1 Score: 574.3 bits (1479), Expect = 2.0e-160
Identity = 318/503 (63.22%), Postives = 380/503 (75.55%), Query Frame = 1


Query: 1   METSASNSDPYSNSSSPTTSPTSSRFG-VSIPSLNFFRSPLSVILDYSGILPTRAVPHES 60
           ME S  N+ P S  ++   S +++ FG +  P+L FF+SPLS +LDYSGIL   +  HE+
Sbjct: 1   MEASPGNTSPTSGGNTGNNSNSTTSFGSMQFPALRFFQSPLSFVLDYSGILSPSSSRHEA 60

Query: 61  E-PIINGSATPDLRVYSQNQNHLMTTTSSSSSSSSNSPTSSSSGNTSPSGEVSIRIIGSG 120
           + P++N     D R +S          S+ +S SSN+            GEVSIRIIG+G
Sbjct: 61  DAPVVNAVVVADSRPHSP---------SACTSGSSNT------------GEVSIRIIGAG 120

Query: 121 EQDP---SPALVGQAGYEQNGGLPVSGDQPESPDE-----------ERVPLVSTASSSIQ 180
           EQ+      A V   G    G L  SG + +S D            ERVPLV    SS +
Sbjct: 121 EQEDRGNGAATVPFHGDGNGGSLGHSG-RVQSLDNLAGTVNGVGSGERVPLVPP--SSPE 180

Query: 181 SGSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFIT 240
            G   V ++G+GV+ + +RDS+YQRYDIQQ+ARWIEQ+LPFSLLLL+VFIRQHL+GFF+T
Sbjct: 181 HGRD-VGDTGDGVDNN-SRDSAYQRYDIQQIARWIEQVLPFSLLLLVVFIRQHLQGFFVT 240

Query: 241 ICISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLHPLVMLP 300
           I +SAVMY+SND+V+KQTALKG+RKI VL   + AF++HV+G+YWW  SDDLL+PL MLP
Sbjct: 241 IWVSAVMYRSNDVVRKQTALKGDRKIPVLLSIAAAFMLHVVGVYWWYRSDDLLYPLAMLP 300

Query: 301 PKTVPPFWHALFIILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLL 360
           PK +PPFWHA+FIILVNDTM RQ  MALKCLLLIYYKNGRGHN+RRQGQILT++EYTLLL
Sbjct: 301 PKAIPPFWHAIFIILVNDTMVRQATMALKCLLLIYYKNGRGHNYRRQGQILTVVEYTLLL 360

Query: 361 YRALLPAPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHY 420
           YRALLPAPVWYRFFLNKD GSLFSSLTTGLYLTFKLTSVVEK+QSF A+ +ALS+K++HY
Sbjct: 361 YRALLPAPVWYRFFLNKDNGSLFSSLTTGLYLTFKLTSVVEKVQSFFASIRALSRKDIHY 420

Query: 421 GSYATSEQASIYIPVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCR 480
           G+YAT EQ      V+AAGDLCAICQEKM+APILLRCKHIFCEDCVSEWFERERTCPLCR
Sbjct: 421 GAYATLEQ------VNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCR 471

Query: 481 ALVKPAELRTFGDGSTSLLFQLF 488
           ALVKPA+LRTFGDGSTSL FQ F
Sbjct: 481 ALVKPADLRTFGDGSTSLFFQFF 471

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g05880 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RNFT2_HUMAN	2.4e-33	30.23	RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens GN=RNF...	[more]
RNFT2_PONAB	4.6e-32	29.90	RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii GN=RNF...	[more]
RNFT1_MOUSE	1.9e-30	28.62	RING finger and transmembrane domain-containing protein 1 OS=Mus musculus GN=Rnf...	[more]
RNFT2_MOUSE	2.5e-30	28.83	RING finger and transmembrane domain-containing protein 2 OS=Mus musculus GN=Rnf...	[more]
RNFT1_DANRE	7.3e-30	27.36	RING finger and transmembrane domain-containing protein 1 OS=Danio rerio GN=rnft...	[more]

BLAST of Cp4.1LG01g05880 vs. TrEMBL


Match Name	E-value	Identity	Description
M5WZS0_PRUPE	1.4e-160	63.22	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005231mg PE=4 SV=1	[more]
A0A151SG05_CAJCA	2.1e-153	63.49	Ring finger and transmembrane domain-containing protein 2 OS=Cajanus cajan GN=KK...	[more]
M5WHB2_PRUPE	3.1e-152	59.76	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005202mg PE=4 SV=1	[more]
W9S1M8_9ROSA	3.1e-152	59.88	RING finger and transmembrane domain-containing protein 2 OS=Morus notabilis GN=...	[more]
A0A067JDD7_JATCU	4.0e-152	59.68	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00624 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g05880 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G01960.1	9.9e-142	56.56	RING/U-box superfamily protein	[more]
AT3G16090.1	2.2e-08	44.64	RING/U-box superfamily protein	[more]
AT1G65040.2	2.9e-08	33.09	RING/U-box superfamily protein	[more]
AT2G42350.1	1.9e-07	42.86	RING/U-box superfamily protein	[more]
AT3G62690.1	1.6e-06	40.00	AtL5	[more]

BLAST of Cp4.1LG01g05880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114254\|ref\|XP_008456974.1\|	9.3e-235	88.98	PREDICTED: RING finger and transmembrane domain-containing protein 1-like [Cucum...	[more]
gi\|449457383\|ref\|XP_004146428.1\|	3.3e-232	88.01	PREDICTED: RING finger and transmembrane domain-containing protein 1-like [Cucum...	[more]
gi\|694373140\|ref\|XP_009363774.1\|	8.1e-162	63.13	PREDICTED: RING finger and transmembrane domain-containing protein 2-like [Pyrus...	[more]
gi\|645256886\|ref\|XP_008234157.1\|	4.0e-161	63.42	PREDICTED: RING finger and transmembrane domain-containing protein 2-like [Prunu...	[more]
gi\|595999086\|ref\|XP_007217960.1\|	2.0e-160	63.22	hypothetical protein PRUPE_ppa005231mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR017907	Znf_RING_CS
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process	GO:0006090	pyruvate metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004416	hydroxyacylglutathione hydrolase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g05880.1	Cp4.1LG01g05880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 425..464 score: 3.3
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 426..463 score: 5.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 426..464 score: 13
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 424..473 score: 1.5
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 441..450 scor
None	No IPR available	PANTHER	PTHR15860	UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN	coord: 86..151 score: 1.8E-255coord: 169..487 score: 1.8E-255coord: 1..61 score: 1.8E
None	No IPR available	PANTHER	PTHR15860:SF4	SUBFAMILY NOT NAMED	coord: 86..151 score: 1.8E-255coord: 169..487 score: 1.8E-255coord: 1..61 score: 1.8E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 420..469 score: 5.08

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g05880	Cucsa.143770	Cucumber (Gy14) v1	cgycpeB0388
Cp4.1LG01g05880	CmaCh04G000960	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g05880	CmaCh04G010530	Cucurbita maxima (Rimu)	cmacpeB723
Cp4.1LG01g05880	CmoCh04G011200	Cucurbita moschata (Rifu)	cmocpeB675
Cp4.1LG01g05880	CmoCh04G000960	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g05880	Cla007314	Watermelon (97103) v1	cpewmB418
Cp4.1LG01g05880	MELO3C020174	Melon (DHL92) v3.5.1	cpemeB366
Cp4.1LG01g05880	ClCG07G005290	Watermelon (Charleston Gray)	cpewcgB410
Cp4.1LG01g05880	CSPI05G11720	Wild cucumber (PI 183967)	cpecpiB438
Cp4.1LG01g05880	Lsi04G010050	Bottle gourd (USVL1VR-Ls)	cpelsiB355
Cp4.1LG01g05880	MELO3C020174.2	Melon (DHL92) v3.6.1	cpemedB442
Cp4.1LG01g05880	CsaV3_5G011140	Cucumber (Chinese Long) v3	cpecucB0542
Cp4.1LG01g05880	Bhi07G000398	Wax gourd	cpewgoB0554
Cp4.1LG01g05880	CsGy5G008980	Cucumber (Gy14) v2	cgybcpeB647
Cp4.1LG01g05880	Carg24464	Silver-seed gourd	carcpeB1258
Cp4.1LG01g05880	Carg00155	Silver-seed gourd	carcpeB0939

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g05880	Cp4.1LG01g07150	Cucurbita pepo (Zucchini)	cpecpeB374

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g05880	Cucumber (Gy14) v1	cgycpeB0478
Cp4.1LG01g05880	Wild cucumber (PI 183967)	cpecpiB423
Cp4.1LG01g05880	Cucumber (Chinese Long) v2	cpecuB438
Cp4.1LG01g05880	Cucumber (Gy14) v2	cgybcpeB636
Cp4.1LG01g05880	Cucumber (Chinese Long) v3	cpecucB0552