CmaCh04G000960 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G000960
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RING finger protein 145
Location	Cma_Chr04 : 475083 .. 480430 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTTCATTTTACATTCAATTCTCCATTTTTTTTTCCCAACCTATTTCTTCGTTTCCTTTTTCCTTCCCCAAATTCCCCCGGCGACCCACCTCCCTCCGCCCCCTTCCGACCGGATCACCGCCATTTCCGGCTCCAAACGCCACATTTATCCTTGCCCATCATCTTCTGTTTTTTTCCTTTCAGGTGGTGGGATTTCGAAGGGGTTGAATCGGTACAGGTTTTGCAAGGAGGGGGAAGGTCGAACATCATTTGGGCTTTTGCCTTTTGCCTTTTGCCTTTTGGTCACTACCAATGGAGACCTCGGCTTCCAATTCTGATCCTTACCCCAATTCTTCTTCACCCACAACTTCTCCTACCTCCTCCAGATTTGGGGTCTCGATCCCTTCGCTCAATTTCTTCCGTTCGCCTCTGTCCGTCATTTTGGATTACTCTGGAATTCTTCCCACTAGGGCTGTTCCTCATGAATCGGAACCTATAATCAACGGCTCTGCCACCCCTGATTTGCGGGTTTATTCTCAAAATCAGAATCACTTGATGACCACCACCACTTCTTCTTCTTCTTCTTCTAGTACTAGTCCCACCTCCTCCTCCTCCTCCGGTAATACCAGCCCCTCTGGGGAGGTTTCGATTAGGATTATTGGGTCTGGTGAGCAAGATCCTTCTCCGGCTCTGGTTGGACAAGCTGGCTATGAGCAAAATGGTGGACTTCCTGTTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCTTTGGTGTCCACTGCTTCTTCGTCTATTCAATCTGGAAGCAGTCGTGTTTCAGAATCTGGAAATGGCGTGGAAGAGAGTGTTAATAGAGATTCGTCTTATCAGAGATACGATATTCAGCAGGTTGCCAGGTGGATTGAACAGATTCTTCCTTTCTCTTTGCTACTGCTGATAGTCTTTATCCGTCAGCATTTGGAAGGTGCTATCTTTTGTCCTCTCTTTTGTTGGACCGATTATAGTTTTCGATTTTTATTGCCCTTTGCACGTGGCCACACTTTTACGTATTATTGATTGTCGTTATCGAATTTCATATAGTGCTGGTAGTAACTAGTCCTTGTTAAGATATAATTTACTGGGAATGCTGGCCATTGCTTACTCAGGACTTCCGTTGTATCTATTAAAATTTCACTCTCGTTAGTTCTTATACCTTTTAGATGACTTACAGCGTGATTGTAGAGGATAAGGTTTGATTTGGATACTTGTGTGGTGTGGTAAATTGCCCCGTGCAACGCGGTTATTGTAAGATCATCCAAGAATTTGGAGACCAGATTGGATTAACTTCATTGACAATTGGGTTCTATTACTAACACATGTTTTCATGTATTGAAAAATAAAATATGCGTTGAGAAGGCAGCTCACGGAAGTGGGGAGGAAGGTGTTGAGAAAGAAGTAGAGGAATACTGTGGAAACAGTTATGCTAGCAGATTATTTGGTTTGGAGATGACACTTTGCCATAAATCTTTGGAACATACTTTTGGACACGTTTGTTTGGTAGTCGACATATACATTAATTATCTTCCACTACCTAACCTAATAAGGGAGTTGCAGTACACTGTTTGGTGTAATCACAAAGACAAGTAGTGATCATCTTGTAATCTTCTCCCTTTTACTCTCTTTCTGTAACATTCTTCTAATTGGTGAGAAATTATTTCTTTGATATTTCCAGGTTTTTTCATCACAATTTGTATATCAGCTGTTATGTATAAGTCGAACGATATTGTCAAGAAACAGACTGCTCTAAAGGTGGCGTAAACCTAAACCCAGACTTATCTTATCTATTAGTACTTTATTTCTTATTCAACTTCACTGAGAATCCACTTGCAAGAAATATATACTGAAGAATTTACTCTTTTTTAGGGGGAGAGGAAAATTTCTGTCCTTGCTGGGACATCTATTGCATTTTTGGTTCATGTTATTGGGATTTACTGGTGGTGCCATCGTGATGATCTTCTATACCCGTTAGTCATGCTTCCACCAAAGACAGTACCACCGTTTTGGCATGCCTTGTTCATAATTTTGGTTAACGGTACAGATTTTCCCTTGCTTTGGCTTATTAAGTTTCTGTAGGTATAGTGATTGAATTAACATATGGAATAGAGCTTCAAAAAATGTATGCAGAAAATTCTTTAAGTGTCACAGTGCGATTTCTAATTAGTTAGCTTGAATGGTGATATAACAAAGGCATAAATATGGTTTATTATCTTTATGTTATCTATATGGATCTTGCAAACATAGTTTTTAAGACAGGATTCAGGATAATTGCCAAAAAGTGAAAGAATGATATTGTGGTTTTACTTTTTCTTTTTTTTTTTTTTTATGCTTCAACCTTCCTCTTATTCCAACTTCTTTGTTGTATTTCTCTCACAATTTTCTGTACAATTTTTCATACATTTGACTTTAATGTACTCATTCTTTGATTTTGGACTCTATTGTGTTGCCATGCCAGATACGATGGTGAGGCAGGTTGCAATGGCTCTCAAATGTCTTCTTCTTATTTACTACAAGAATGGCAGAGGCCATAATTTTCGCCGGCAGGTATTATGAGATCTCAAATTTAGCTTAATCATATGTTTTGTGTTTATCTTGTTGTAACCATTAATATTATTGAAATGTCTGACAATTACTTGGTTTTAGTTCTTTGATTGTTTATAATTCATGTTTCAGGGACAAATTTTAACTCTCATGGAATACACTCTTCTGTTGTATCGTGCATTGTTACCGACACCTGTATGGTACCGGTTTTTCTTGAACAAAGATCAAGGGAGCCTTTTTTCATCACTGACAACGGGATTGTATTTAACCTTCAAGCTAACTTCTGTTGTTGAGAAGGTATGGTTTAAAACATGAATATTCATACCTTAATAAGCACTAAAAATTTCAATATTATGTCATAGTTAGTGGAAACCAACCTTGTTCACATACTATCTATTTTGTTATTTTCTCTTTAGATTCAATCATTCGTGGCTGCATTTAAGGCTCTATCACAAAAAGAAGTCCATTATGGATCATATGCCACATCAGAACAGGCAAGTATATACATACCTGTCTATTGTAGTCTCTTTCGAAATTTACCATTTTAAAACAGCTTTGTGTTTCTTCTTGCATATAACTTTACGCATCTGTTTTCACATTCTATTTAATGTATCCGGCAAATAACGATATAACATAAATATTTGTGGAACCCTTTAAGATGATTGAATGTCTCCTTTTTTAATGCTTTCTTAATGTTACAAGTCATTCCCTCTATAGTTCATGTTAATGGGATTCCCTTACGTTCTCATGAATATGTGATATTATTACTAGCCTACAGGATATGGTGGGAGAAGTGACCTAGAATTTTTCTTAGATAAGATAAACCAATGTGTCACTATCTTTCATTGGTGTGGCGACTTAACTTTTGTACCTTTTGAAGTTACATGATTGACTCTTCTATATGTAACTTTTTTTTTTCTTTCTTTCTCTCTTTCTTTCTTTGCTACTTCCCTTTTATAATTCTGGCTAATTGGAGTGATTCATTTTAAATACCTTTTGGTCTTTATTTGGTTGGGTATCAAAATTTTAGTTTTTATGTTAAAAAGCTGCATTTCAATGAAAGTTTTAGGGGTACAAGTAAAATTTGCTTTTTTCTTTTATATTTCTGTAGTTACTCGTATCAGGCCGTACATCTTGGGATGCTATTTTTGAGGTGTGCTTTTTTCATTTGTTTGACGCATCAAGAGGAAAAAAAAAAAGGTCATAATCGTGATTTGGCAATTAGCTCCCGTAATTTCCTGCGTGTCACCCACATTGAAGCAGGAAAAGCTCTTGACATTAGTATTCTATGTCCTGTGATTTCTCTAGCATTGCATGATCAAATAGTAACTTCATGCATTAATTAAATTCCTTCAAGTCTTCCTTATACTTTATTTTACAGGTAAGTGCGGCGGGAGACCTCTGTGCTATTTGCCAGGAGAAGATGAATGCTCCAATCCTGTTACGCTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAATGGTCAGTATGATGACTTCACATCTCTTGCGTTTTCTGAATACTACCAACATTGCATTACTATTTTCATATCAGACCTCCATAGGACCAATATATAGATTATAACAGGGGGACAAGCATTCTAATTTGAACTCTTAGGTACTATTGTAATTATCTACCTTGTTATGAGCCAAAAAGTCATGCTCTTGGCTGAGAAAAACTGAATTTGTTCATCAGGTATCGAGGAATTAGTTCAGTTTATTTTTAAATTCTTTTACTGGATGGCCTATCATATAAAGTAGAGGTATATAATTTTTAGAGTTTTTTTTTTGCAAATCCAAACACACCACATTATCATTCCATCCTCATATGTATCTTATGAATCCTTAATATTAGAAATGATCTATATGGTCATATCATTCTTATTATTAGTGACAGGGGATTGTCTATGTCTGACTAGTATGGCTACGGCATTTATTTGACTGAGACTATGCTGTGTTGCCCACATTTTTTTTTCATTTACTCCTGCGCACGCATTCGACAATGGACCTACTTGGGTGCACGGAGATGAAGGAACCAAAAAAAAAAAAAAAAATGAAGAAAGGACAGAACCCCTTGAATCTTGATTAACAGTGGCACGATTCTTTCGACTGGGCATAAGTCTAGTGCTTAGGAATTAGTTTTAGCTCTAACAAATGTCATTGCATTTCCATTTACTGGTTCAAGTACTTGTGTTTTCAGGTTTGAAAGAGAAAGAACTTGCCCTCTCTGCCGGGCACTGGTAAAGCCAGCAGAACTCCGAACATTTGGCGACGGGTCGACCAGCTTACTCTTCCAGTTGTTTTAGACAACCATTTGGCATTTCTGGACGTAACAGCTCTATCAGCTTGACAAAGAAACATATTGTTTATTGGATGGACAGGGGAGAAGAAAAAGAACAAAGAGAAGGGGAAAGAAGAGAAAAAGAAAAAGGGAAACATAACATAACATCCAGATGAGTTTAAAGATGCTGTCAAATTCAAAACTGGATTAGTATTATATTAATGCTTTGTAATCATTGTGACGAGTTGAGTTAGATGTCCAAACAGAAGATGGATTTAATAAAATCCCATTTCATCATTAAATTCAATGAAATCTAATTCTTAACGAAAAGAATCCCACTGTGAAAACTGCATGTTACTTGAAAACTGATGAGTATTCCCCGTAGAGTTTAGGCCTGGAAACAGCTGCCATGTTGAATGTGTAGAGTCTGCAGTGATTATGTAAACACAAATAATTGTTGTTCATATACTGTTCTACAGGTTTCAAGTGTGAGGCATCA

mRNA sequence

CGTTTCATTTTACATTCAATTCTCCATTTTTTTTTCCCAACCTATTTCTTCGTTTCCTTTTTCCTTCCCCAAATTCCCCCGGCGACCCACCTCCCTCCGCCCCCTTCCGACCGGATCACCGCCATTTCCGGCTCCAAACGCCACATTTATCCTTGCCCATCATCTTCTGTTTTTTTCCTTTCAGGTGGTGGGATTTCGAAGGGGTTGAATCGGTACAGGTTTTGCAAGGAGGGGGAAGGTCGAACATCATTTGGGCTTTTGCCTTTTGCCTTTTGCCTTTTGGTCACTACCAATGGAGACCTCGGCTTCCAATTCTGATCCTTACCCCAATTCTTCTTCACCCACAACTTCTCCTACCTCCTCCAGATTTGGGGTCTCGATCCCTTCGCTCAATTTCTTCCGTTCGCCTCTGTCCGTCATTTTGGATTACTCTGGAATTCTTCCCACTAGGGCTGTTCCTCATGAATCGGAACCTATAATCAACGGCTCTGCCACCCCTGATTTGCGGGTTTATTCTCAAAATCAGAATCACTTGATGACCACCACCACTTCTTCTTCTTCTTCTTCTAGTACTAGTCCCACCTCCTCCTCCTCCTCCGGTAATACCAGCCCCTCTGGGGAGGTTTCGATTAGGATTATTGGGTCTGGTGAGCAAGATCCTTCTCCGGCTCTGGTTGGACAAGCTGGCTATGAGCAAAATGGTGGACTTCCTGTTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCTTTGGTGTCCACTGCTTCTTCGTCTATTCAATCTGGAAGCAGTCGTGTTTCAGAATCTGGAAATGGCGTGGAAGAGAGTGTTAATAGAGATTCGTCTTATCAGAGATACGATATTCAGCAGGTTGCCAGGTGGATTGAACAGATTCTTCCTTTCTCTTTGCTACTGCTGATAGTCTTTATCCGTCAGCATTTGGAAGGTTTTTTCATCACAATTTGTATATCAGCTGTTATGTATAAGTCGAACGATATTGTCAAGAAACAGACTGCTCTAAAGGGGGAGAGGAAAATTTCTGTCCTTGCTGGGACATCTATTGCATTTTTGGTTCATGTTATTGGGATTTACTGGTGGTGCCATCGTGATGATCTTCTATACCCGTTAGTCATGCTTCCACCAAAGACAGTACCACCGTTTTGGCATGCCTTGTTCATAATTTTGGTTAACGATACGATGGTGAGGCAGGTTGCAATGGCTCTCAAATGTCTTCTTCTTATTTACTACAAGAATGGCAGAGGCCATAATTTTCGCCGGCAGGGACAAATTTTAACTCTCATGGAATACACTCTTCTGTTGTATCGTGCATTGTTACCGACACCTGTATGGTACCGGTTTTTCTTGAACAAAGATCAAGGGAGCCTTTTTTCATCACTGACAACGGGATTGTATTTAACCTTCAAGCTAACTTCTGTTGTTGAGAAGATTCAATCATTCGTGGCTGCATTTAAGGCTCTATCACAAAAAGAAGTCCATTATGGATCATATGCCACATCAGAACAGGTAAGTGCGGCGGGAGACCTCTGTGCTATTTGCCAGGAGAAGATGAATGCTCCAATCCTGTTACGCTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAATGGTTTGAAAGAGAAAGAACTTGCCCTCTCTGCCGGGCACTGGTAAAGCCAGCAGAACTCCGAACATTTGGCGACGGGTCGACCAGCTTACTCTTCCAGTTGTTTTAGACAACCATTTGGCATTTCTGGACGTAACAGCTCTATCAGCTTGACAAAGAAACATATTGTTTATTGGATGGACAGGGGAGAAGAAAAAGAACAAAGAGAAGGGGAAAGAAGAGAAAAAGAAAAAGGGAAACATAACATAACATCCAGATGAGTTTAAAGATGCTGTCAAATTCAAAACTGGATTAGTATTATATTAATGCTTTGTAATCATTGTGACGAGTTGAGTTAGATGTCCAAACAGAAGATGGATTTAATAAAATCCCATTTCATCATTAAATTCAATGAAATCTAATTCTTAACGAAAAGAATCCCACTGTGAAAACTGCATGTTACTTGAAAACTGATGAGTATTCCCCGTAGAGTTTAGGCCTGGAAACAGCTGCCATGTTGAATGTGTAGAGTCTGCAGTGATTATGTAAACACAAATAATTGTTGTTCATATACTGTTCTACAGGTTTCAAGTGTGAGGCATCA

Coding sequence (CDS)

ATGGAGACCTCGGCTTCCAATTCTGATCCTTACCCCAATTCTTCTTCACCCACAACTTCTCCTACCTCCTCCAGATTTGGGGTCTCGATCCCTTCGCTCAATTTCTTCCGTTCGCCTCTGTCCGTCATTTTGGATTACTCTGGAATTCTTCCCACTAGGGCTGTTCCTCATGAATCGGAACCTATAATCAACGGCTCTGCCACCCCTGATTTGCGGGTTTATTCTCAAAATCAGAATCACTTGATGACCACCACCACTTCTTCTTCTTCTTCTTCTAGTACTAGTCCCACCTCCTCCTCCTCCTCCGGTAATACCAGCCCCTCTGGGGAGGTTTCGATTAGGATTATTGGGTCTGGTGAGCAAGATCCTTCTCCGGCTCTGGTTGGACAAGCTGGCTATGAGCAAAATGGTGGACTTCCTGTTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCTTTGGTGTCCACTGCTTCTTCGTCTATTCAATCTGGAAGCAGTCGTGTTTCAGAATCTGGAAATGGCGTGGAAGAGAGTGTTAATAGAGATTCGTCTTATCAGAGATACGATATTCAGCAGGTTGCCAGGTGGATTGAACAGATTCTTCCTTTCTCTTTGCTACTGCTGATAGTCTTTATCCGTCAGCATTTGGAAGGTTTTTTCATCACAATTTGTATATCAGCTGTTATGTATAAGTCGAACGATATTGTCAAGAAACAGACTGCTCTAAAGGGGGAGAGGAAAATTTCTGTCCTTGCTGGGACATCTATTGCATTTTTGGTTCATGTTATTGGGATTTACTGGTGGTGCCATCGTGATGATCTTCTATACCCGTTAGTCATGCTTCCACCAAAGACAGTACCACCGTTTTGGCATGCCTTGTTCATAATTTTGGTTAACGATACGATGGTGAGGCAGGTTGCAATGGCTCTCAAATGTCTTCTTCTTATTTACTACAAGAATGGCAGAGGCCATAATTTTCGCCGGCAGGGACAAATTTTAACTCTCATGGAATACACTCTTCTGTTGTATCGTGCATTGTTACCGACACCTGTATGGTACCGGTTTTTCTTGAACAAAGATCAAGGGAGCCTTTTTTCATCACTGACAACGGGATTGTATTTAACCTTCAAGCTAACTTCTGTTGTTGAGAAGATTCAATCATTCGTGGCTGCATTTAAGGCTCTATCACAAAAAGAAGTCCATTATGGATCATATGCCACATCAGAACAGGTAAGTGCGGCGGGAGACCTCTGTGCTATTTGCCAGGAGAAGATGAATGCTCCAATCCTGTTACGCTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAATGGTTTGAAAGAGAAAGAACTTGCCCTCTCTGCCGGGCACTGGTAAAGCCAGCAGAACTCCGAACATTTGGCGACGGGTCGACCAGCTTACTCTTCCAGTTGTTTTAG

Protein sequence

METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESEPIINGSATPDLRVYSQNQNHLMTTTTSSSSSSSTSPTSSSSSGNTSPSGEVSIRIIGSGEQDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHRDDLLYPLVMLPPKTVPPFWHALFIILVNDTMVRQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF

Homology

[Close]

BLAST of CmaCh04G000960 vs. Swiss-Prot
Match: RNFT2_HUMAN (RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens GN=RNFT2 PE=2 SV=2)

HSP 1 Score: 147.9 bits (372), Expect = 2.8e-34
Identity = 90/295 (30.51%), Postives = 163/295 (55.25%), Query Frame = 1


Query: 192 DIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVKKQTALKGERKI 251
           +++ V  W+++ LPF L+LL     QH  G  + I +++    +N  +++Q +LK +R +
Sbjct: 155 ELKAVICWLQKGLPFILILLAKLCFQHKLGIAVCIGMASTFAYANSTLREQVSLKEKRSV 214

Query: 252 SVLAGTSIAFLV-HVIGIYWWCHRDDLLYPLVMLPPKT-VPPFWHALFIILVNDTMVRQV 311
            V+    +AFL  + + + +      L   L+ L P   +  F+  L+I+ + D +++ +
Sbjct: 215 LVILWI-LAFLAGNTLYVLYTFSSQQLYNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYI 274

Query: 312 AMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFLNKDQGSLF- 371
            +ALKCL++   K       + +G+   ++E    L+R+L+P  +WY++ +  D  + + 
Sbjct: 275 TIALKCLIVALPKIILA--VKSKGKFYLVIEELSQLFRSLVPIQLWYKYIMGDDSSNSYF 334

Query: 372 -SSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQVSAAGDLCAICQEK 431
              +   LY   K   +  ++     A K L   + +YG  AT +Q + AGD+CAICQ +
Sbjct: 335 LGGVLIVLYSLCKSFDICGRVGGVRKALKLLCTSQ-NYGVRATGQQCTEAGDICAICQAE 394

Query: 432 MNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 483
              P++L C+H+FCE+C+  W +RERTCPLCR+ V    LR + DG+TS  FQ++
Sbjct: 395 FREPLILLCQHVFCEECLCLWLDRERTCPLCRS-VAVDTLRCWKDGATSAHFQVY 444

[Close]

BLAST of CmaCh04G000960 vs. Swiss-Prot
Match: RNFT2_PONAB (RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii GN=RNFT2 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 5.4e-33
Identity = 89/295 (30.17%), Postives = 161/295 (54.58%), Query Frame = 1


Query: 192 DIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVKKQTALKGERKI 251
           +++ V  W+++ LPF L+LL     QH  G  + I +++    +N  +++Q +LK +R +
Sbjct: 155 ELKAVICWLQKGLPFILILLAKLCFQHKLGIAVCIGMASTFAYANSTLREQVSLKEKRSV 214

Query: 252 SVLAGTSIAFLV-HVIGIYWWCHRDDLLYPLVMLPPKTVP-PFWHALFIILVNDTMVRQV 311
            V+    +AFL  + + + +      L   L+ L P      F+  L+I+ + D +++ +
Sbjct: 215 LVILWI-LAFLAGNTLYVLYTFSSQQLYNSLIFLKPNLETLDFFDLLWIVGIADFVLKYI 274

Query: 312 AMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFLNKDQGSLF- 371
            +ALKCL++   K       + +G+   ++E    L+R+L+P  +WY++ +  D  + + 
Sbjct: 275 TIALKCLIVALPKIILA--VKSKGKFYLVIEELSQLFRSLVPIQLWYKYIMGDDSSNSYF 334

Query: 372 -SSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQVSAAGDLCAICQEK 431
              +   LY   K   +  ++     A K L   + +YG  AT +Q + AGD+CAICQ +
Sbjct: 335 LGGVLIVLYSLCKSFDICGRVGGVRKALKLLCTSQ-NYGVRATGQQCTEAGDICAICQAE 394

Query: 432 MNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 483
              P++L C+H+FCE+C+  W +RERTCPL R+ V    LR + DG+TS  FQ++
Sbjct: 395 FREPLILLCQHVFCEECLCLWLDRERTCPLSRS-VAVDTLRCWKDGATSAHFQVY 444

[Close]

BLAST of CmaCh04G000960 vs. Swiss-Prot
Match: RNFT1_DANRE (RING finger and transmembrane domain-containing protein 1 OS=Danio rerio GN=rnft1 PE=2 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 1.6e-32
Identity = 91/323 (28.17%), Postives = 163/323 (50.46%), Query Frame = 1


Query: 167 GSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITI 226
           G S   ES +G  +  + +SS    +++ + RW+++ LPF ++L    + QH  G  + +
Sbjct: 102 GHSHEHESDSGESDLESGESSSSISELRYLLRWLKKSLPFIVILCAKLVIQHALGLAVAV 161

Query: 227 CISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHRDDLLYPLVMLPP 286
            +       N  ++ Q  L  +R+ ++     + FL     + ++      LY  +    
Sbjct: 162 GLFTTFMYVNKSIQTQVFLH-DRRTNLHCAWLLLFLTSSSLLVFYTFHTQSLYRCLFFAN 221

Query: 287 KTVP--PFWHALFIILVNDTMVRQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLL 346
            T+    FW  L+ + V + +++ + M  KCL+L+         +RR+GQ   L+E    
Sbjct: 222 ATIDYHNFWEVLWSVGVTNFILKFIFMGFKCLILLVPCPLM--TYRRRGQWYMLIEEVGQ 281

Query: 347 LYRALLPTPVWYRFFLNKDQGSLFSSLTTG-----LYLTFKLTSVVEKIQSFVAAFKALS 406
           LY+ + P P+W+R+ ++ D+      LT G     LYL  KL ++     S     +   
Sbjct: 282 LYQVIAPVPLWFRYLVSYDEMDTSVGLTLGILLALLYLIMKLLALYGLSGSLQKTLRTFF 341

Query: 407 QKEVHYGSYATSEQVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCR 466
             EV+ G+ A+  Q+  AGD+C ICQ     P +L C+HIFCE+C+++W  +ERTCPLCR
Sbjct: 342 SPEVN-GAPASPAQIREAGDICPICQADFKQPRVLVCQHIFCEECIAQWLNQERTCPLCR 401

Query: 467 ALVKPAELRTFGDGSTSLLFQLF 483
            ++   ++  + DG+TS   Q++
Sbjct: 402 TVITD-KVHKWKDGATSAHLQIY 419

[Close]

BLAST of CmaCh04G000960 vs. Swiss-Prot
Match: RNFT2_MOUSE (RING finger and transmembrane domain-containing protein 2 OS=Mus musculus GN=Rnft2 PE=2 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 1.3e-31
Identity = 93/320 (29.06%), Postives = 167/320 (52.19%), Query Frame = 1


Query: 167 GSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITI 226
           G      S  GV+E     +     +++ V  W+++ LPF L+LL     QH  G  + I
Sbjct: 132 GGDHRGHSEEGVDEQPGTPAPALS-ELKAVISWLQKGLPFILILLAKLCFQHKLGIAVCI 191

Query: 227 CISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLV-HVIGIYWWCHRDDLLYPLVMLP 286
            +++    +N  +++Q +LK +R + V+    +AFL  + + + +      L   L+ L 
Sbjct: 192 GMASTFAYANSTLREQVSLKEKRSVLVILWI-LAFLAGNTMYVLYTFSSQQLYSSLIFLK 251

Query: 287 PKTVP-PFWHALFIILVNDTMVRQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLL 346
           P      F+  L+I+ + D +++ + +ALKCL++   K       + +G+   ++E    
Sbjct: 252 PNLETLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILA--VKSKGKFYLVIEELSQ 311

Query: 347 LYRALLPTPVWYRFFLNKDQGSLF--SSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKE 406
           L+R+L+P  +WY++ +  D  + +    +   LY   K   +  ++     A K L   +
Sbjct: 312 LFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGLRKALKLLCTSQ 371

Query: 407 VHYGSYATSEQVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALV 466
            +YG  AT +Q + AG +CAICQ +   P++L C+H+FCE+C+  W +RERTCPLCR+ V
Sbjct: 372 -NYGVRATGQQCTEAGAVCAICQAEFRDPMILLCQHVFCEECLCLWLDRERTCPLCRS-V 431

Query: 467 KPAELRTFGDGSTSLLFQLF 483
               LR + DG+TS   Q++
Sbjct: 432 AVDTLRCWKDGATSAHLQVY 445

[Close]

BLAST of CmaCh04G000960 vs. Swiss-Prot
Match: RNFT1_HUMAN (RING finger and transmembrane domain-containing protein 1 OS=Homo sapiens GN=RNFT1 PE=2 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 8.0e-29
Identity = 122/450 (27.11%), Postives = 204/450 (45.33%), Query Frame = 1


Query: 51  PTRAVPHES----EPIINGSATPDLRVYSQNQNHLMTTTTSSSSSSSTSP----TSSSSS 110
           P  A  HE     E   +GS    LR    N++ L +   + SS  +++P    T  +  
Sbjct: 11  PPSASGHERRQRPEAKTSGSEKKYLRAMQANRSQLHSPPGTGSSEDASTPQCVHTRLTGE 70

Query: 111 GNTSPSGEVSIRIIGSGEQ---DPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVST 170
           G+   SG+V I+I    ++   + S   +    +    G   S  +  S  E R+    T
Sbjct: 71  GSCPHSGDVHIQINSIPKECAENASSRNIRSGVHSCAHGCVHSRLRGHSHSEARLT-DDT 130

Query: 171 ASSSIQSGSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHL 230
           A+ S   GSS  SE                    + + +W+++ LP+ L+L +  + QH+
Sbjct: 131 AAESGDHGSSSFSE-------------------FRYLFKWLQKSLPYILILSVKLVMQHI 190

Query: 231 EGFFITICISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLV-HVIGIYWWCHRDDLL 290
            G  + I +      +N  +  Q  L+ ER   +     + FL    + +Y+  H   L 
Sbjct: 191 TGISLGIGLLTTFMYANKSIVNQVFLR-ERSSKIQCAWLLVFLAGSSVLLYYTFHSQSLY 250

Query: 291 YPLVMLPPKTVP-PFWHALFIILVNDTMVRQVAMALKCLLLIYYKNGRGHNFRRQGQILT 350
           Y L+ L P      FW   +I+ + D +++   M LKCL+L+         F+ +G    
Sbjct: 251 YSLIFLNPTLDHLSFWEVFWIVGITDFILKFFFMGLKCLILLVPSFIMP--FKSKGYWYM 310

Query: 351 LMEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTG-----LYLTFKLTSVVEKIQSFV 410
           L+E     YR  +P PVW+R+ ++  +    +  + G     LYL  KL      +++F 
Sbjct: 311 LLEELCQYYRTFVPIPVWFRYLISYGEFGNVTRWSLGILLALLYLILKLLEFFGHLRTFR 370

Query: 411 AAFKALSQKEVHYGSYATSEQVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERE 470
              +    +   YG  A+  Q S   D+C+ICQ +   PILL C+HIFCE+C++ WF RE
Sbjct: 371 QVLRIFFTQP-SYGVAASKRQCSDVDDICSICQAEFQKPILLICQHIFCEECMTLWFNRE 430

Query: 471 RTCPLCRALVKPAELRTFGDGSTSLLFQLF 483
           +TCPLCR ++    +  + DG+TS   Q++
Sbjct: 431 KTCPLCRTVISD-HINKWKDGATSSHLQIY 435

[Close]

BLAST of CmaCh04G000960 vs. TrEMBL
Match: M5WZS0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005231mg PE=4 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 7.3e-162
Identity = 316/498 (63.45%), Postives = 376/498 (75.50%), Query Frame = 1


Query: 1   METSASNSDPYPNSSSPTTSPTSSRFG-VSIPSLNFFRSPLSVILDYSGILPTRAVPHES 60
           ME S  N+ P    ++   S +++ FG +  P+L FF+SPLS +LDYSGIL   +  HE+
Sbjct: 1   MEASPGNTSPTSGGNTGNNSNSTTSFGSMQFPALRFFQSPLSFVLDYSGILSPSSSRHEA 60

Query: 61  E-PIINGSATPDLRVYSQNQNHLMTTTTSSSSSSSTSPTSSSSSGNTSPSGEVSIRIIGS 120
           + P++N     D R +S +                     +S S NT   GEVSIRIIG+
Sbjct: 61  DAPVVNAVVVADSRPHSPS-------------------ACTSGSSNT---GEVSIRIIGA 120

Query: 121 GEQDP---SPALVGQAGYEQNGGLPVSGDQPESPDE-----------ERVPLVSTASSSI 180
           GEQ+      A V   G    G L  SG + +S D            ERVPLV    SS 
Sbjct: 121 GEQEDRGNGAATVPFHGDGNGGSLGHSG-RVQSLDNLAGTVNGVGSGERVPLVPP--SSP 180

Query: 181 QSGSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFI 240
           + G   V ++G+GV+ + +RDS+YQRYDIQQ+ARWIEQ+LPFSLLLL+VFIRQHL+GFF+
Sbjct: 181 EHGRD-VGDTGDGVDNN-SRDSAYQRYDIQQIARWIEQVLPFSLLLLVVFIRQHLQGFFV 240

Query: 241 TICISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHRDDLLYPLVML 300
           TI +SAVMY+SND+V+KQTALKG+RKI VL   + AF++HV+G+YWW   DDLLYPL ML
Sbjct: 241 TIWVSAVMYRSNDVVRKQTALKGDRKIPVLLSIAAAFMLHVVGVYWWYRSDDLLYPLAML 300

Query: 301 PPKTVPPFWHALFIILVNDTMVRQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLL 360
           PPK +PPFWHA+FIILVNDTMVRQ  MALKCLLLIYYKNGRGHN+RRQGQILT++EYTLL
Sbjct: 301 PPKAIPPFWHAIFIILVNDTMVRQATMALKCLLLIYYKNGRGHNYRRQGQILTVVEYTLL 360

Query: 361 LYRALLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVH 420
           LYRALLP PVWYRFFLNKD GSLFSSLTTGLYLTFKLTSVVEK+QSF A+ +ALS+K++H
Sbjct: 361 LYRALLPAPVWYRFFLNKDNGSLFSSLTTGLYLTFKLTSVVEKVQSFFASIRALSRKDIH 420

Query: 421 YGSYATSEQVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 480
           YG+YAT EQV+AAGDLCAICQEKM+APILLRCKHIFCEDCVSEWFERERTCPLCRALVKP
Sbjct: 421 YGAYATLEQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 471

Query: 481 AELRTFGDGSTSLLFQLF 483
           A+LRTFGDGSTSL FQ F
Sbjct: 481 ADLRTFGDGSTSLFFQFF 471

[Close]

BLAST of CmaCh04G000960 vs. TrEMBL
Match: M5WHB2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005202mg PE=4 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 2.3e-155
Identity = 303/497 (60.97%), Postives = 365/497 (73.44%), Query Frame = 1


Query: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           ME    N D +  +S    + +S R+G+ + + N  ++PLS +L+YSG+L  R+   E+E
Sbjct: 1   MEVPGGNLDSFRAASG---NSSSRRYGM-LSASNIIQAPLSALLEYSGLLRGRSNHQEAE 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTTSSSSSSSTSPTSSSSSGNTSPSGEVSIRIIGSGE 120
            +ING +    R +  +Q                SPT       TS  GEVSIRIIG+GE
Sbjct: 61  SLINGRSAAAFRDHHHSQ-------------LDQSPT-------TSNDGEVSIRIIGAGE 120

Query: 121 QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEE 180
           Q+      G     Q   + V  ++  +P    V  VS  +   Q+       SG G+ +
Sbjct: 121 QEHDREGAGLV-VGQLREVTVPPNEVSAPPMAGVASVSLTTEEGQTDGRTDRSSGEGMPQ 180

Query: 181 SVN---------------RDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFIT 240
           S+N               RDSSYQRYDIQQ ARWIEQ+LPFSLLLL+VFIRQHL+GFF+T
Sbjct: 181 SLNGSADGEGVDGAGSNGRDSSYQRYDIQQAARWIEQVLPFSLLLLVVFIRQHLQGFFVT 240

Query: 241 ICISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHRDDLLYPLVMLP 300
           I I+AVM+KSNDI++KQTALKGERK++VL G S+AF +HV+G+YWW   DDLLYPL+MLP
Sbjct: 241 IWIAAVMFKSNDILRKQTALKGERKVAVLIGISLAFALHVVGVYWWYQNDDLLYPLIMLP 300

Query: 301 PKTVPPFWHALFIILVNDTMVRQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLL 360
           PK +PPFWHA+FII+VNDT+VRQ AM LKC+LLIYYKN RG N+R+QGQ+LTL+EY LLL
Sbjct: 301 PKLIPPFWHAVFIIMVNDTLVRQAAMVLKCILLIYYKNSRGRNYRKQGQMLTLLEYLLLL 360

Query: 361 YRALLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHY 420
           YRALLPTPVWYRFFLNK+ GSLFSSL TGLYLTFKLTSVVEK+QSF AA KALS+KEVHY
Sbjct: 361 YRALLPTPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHY 420

Query: 421 GSYATSEQVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPA 480
           G+YATSEQV+AAGDLCAICQEKM+APILLRCKHIFCEDCVSEWFERERTCPLCRALVKPA
Sbjct: 421 GAYATSEQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPA 472

Query: 481 ELRTFGDGSTSLLFQLF 483
           +LR+FGDGSTSL FQLF
Sbjct: 481 DLRSFGDGSTSLFFQLF 472

[Close]

BLAST of CmaCh04G000960 vs. TrEMBL
Match: A0A067JDD7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00624 PE=4 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 2.3e-155
Identity = 301/496 (60.69%), Postives = 375/496 (75.60%), Query Frame = 1


Query: 1   METSASNSDPYPNSS--SPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGIL--PTRAVP 60
           ME S SNSD Y  SS  S T+S  S R+G+ + + +  ++P+S +L+YSG+L   TR+  
Sbjct: 12  MEASGSNSDTYRGSSGGSSTSSSNSRRYGM-LSASSIIQAPISALLEYSGLLRTATRSTH 71

Query: 61  HESEPIINGSATPDLRVYSQNQNHLMTTTTSSSSSSSTSPTSSSSSGNTSPSGEVSIRII 120
            E++P+I GS            NH +  +T+S++++               +GEV+IRII
Sbjct: 72  QETDPLITGSG-------GIQNNHRLDDSTASAAAN---------------NGEVAIRII 131

Query: 121 GSGE----QDPSPALVGQAGYEQNGGLP------VSGDQPESPDEERVPLVSTASSSIQS 180
           G+GE    ++ S  +VGQ G +    +        S  Q +S ++      +T   S  S
Sbjct: 132 GAGEHEHDREGSGLVVGQLGAQSEVSVQQPMPGMASDVQGDSRNDRGTGEGATQQPSNAS 191

Query: 181 GSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITI 240
           G    ++ G+G      RDSSYQRYDIQQ ARWIEQ+LPFSLLLL+VFIRQHL+GFF+TI
Sbjct: 192 GDGEAAD-GSGAN---GRDSSYQRYDIQQAARWIEQVLPFSLLLLVVFIRQHLQGFFVTI 251

Query: 241 CISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHRDDLLYPLVMLPP 300
            I+ VM+KSNDI++KQTALKGERKISVL G S+AF +HV+G+YWW   DDLLYPL+MLPP
Sbjct: 252 WIAVVMFKSNDILRKQTALKGERKISVLIGISLAFTLHVVGVYWWYQNDDLLYPLIMLPP 311

Query: 301 KTVPPFWHALFIILVNDTMVRQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLY 360
           K++PPFWHA+FII+VNDT+VRQ AM  KC+LL+YYKN RG N+R+QGQ+LTL+EY +LLY
Sbjct: 312 KSIPPFWHAIFIIMVNDTLVRQAAMVFKCILLMYYKNSRGRNYRKQGQMLTLVEYLMLLY 371

Query: 361 RALLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYG 420
           RALLPTPVWYRFFLNK+ GSLFSSL TGLYLTFKLTSVVEK+QSF AA KALS+KEVHYG
Sbjct: 372 RALLPTPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYG 431

Query: 421 SYATSEQVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAE 480
           +YATSEQV+AAGDLCAICQEKM+APILLRCKHIFCEDCVSEWFERERTCPLCRALVKPA+
Sbjct: 432 AYATSEQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAD 480

Query: 481 LRTFGDGSTSLLFQLF 483
           L++FGDGST+L FQ+F
Sbjct: 492 LKSFGDGSTTLFFQIF 480

[Close]

BLAST of CmaCh04G000960 vs. TrEMBL
Match: A0A151SG05_CAJCA (Ring finger and transmembrane domain-containing protein 2 OS=Cajanus cajan GN=KK1_024348 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 3.0e-155
Identity = 316/488 (64.75%), Postives = 368/488 (75.41%), Query Frame = 1


Query: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           ME+S S+S    +S S T     + FG+S P    FRSPLS+++DY       A    +E
Sbjct: 1   MESSPSSSSSSSSSGSETGGGAVTWFGMSFP----FRSPLSLVMDYC------AREDSAE 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTTSSSSSSSTSPTSSSSSGNTSPSGEVSIRIIGSGE 120
           P+I     P  R   Q Q    + + S+S+S+S S  S S     S + EV+IRIIG+GE
Sbjct: 61  PVI---IIPRTRPRFQAQPESASASASASASASAS-ASDSDENACSGAEEVAIRIIGAGE 120

Query: 121 QD---PSPALVGQAGYEQN---GGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSES 180
           Q+   PS +   +AG E+        +S +      EERVPLVS        G  R S S
Sbjct: 121 QESGSPSSSRGREAGCEEEVIGRSAMLSSEARRRMAEERVPLVSLDDGI---GGGRDSSS 180

Query: 181 GNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYK 240
                 S +  S+YQRYDIQQVA+WIEQILPFSLLLLIVFIRQHL+GFF+TICISAVM+K
Sbjct: 181 ------SSSSSSTYQRYDIQQVAKWIEQILPFSLLLLIVFIRQHLQGFFVTICISAVMFK 240

Query: 241 SNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHRDDLLYPLVMLPPKTVPPFWH 300
           SN+IVKKQTALKG+RK+S+L G S AF++HVI IYWW   DDLLYPL MLPPK+ PPFWH
Sbjct: 241 SNEIVKKQTALKGDRKVSILIGISFAFMLHVICIYWWYRNDDLLYPLAMLPPKSTPPFWH 300

Query: 301 ALFIILVNDTMVRQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPV 360
            +FIILVNDT+VRQ AMA KC+LLIYYKNGRGHNFRRQGQ+LTL+EYTLLLYRALLPTPV
Sbjct: 301 TIFIILVNDTLVRQAAMASKCVLLIYYKNGRGHNFRRQGQMLTLVEYTLLLYRALLPTPV 360

Query: 361 WYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQV 420
           WYRFFLNK+ GSLFSSLTTGLYLTFKLTSVVEK+Q FV+A KALS+KEVHYG YAT+EQV
Sbjct: 361 WYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQCFVSALKALSKKEVHYGVYATTEQV 420

Query: 421 SAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGS 480
           +AAGD+CAICQEKM APILL CKH+FCE+CVSEWFERERTCPLCRALVKPA+LRTFGDGS
Sbjct: 421 NAAGDMCAICQEKMQAPILLSCKHMFCEECVSEWFERERTCPLCRALVKPADLRTFGDGS 465

Query: 481 TSLLFQLF 483
           TSL FQLF
Sbjct: 481 TSLFFQLF 465

[Close]

BLAST of CmaCh04G000960 vs. TrEMBL
Match: V4S607_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011668mg PE=4 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 5.0e-155
Identity = 303/492 (61.59%), Postives = 368/492 (74.80%), Query Frame = 1


Query: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           ME S +N D Y   S   TS  S R+G+ + + N  ++PLS +L+YSG+L TR+   ESE
Sbjct: 1   MEASVTNPDAYRGPSG--TSSNSRRYGM-LSASNIIQAPLSTLLEYSGLLRTRSSHQESE 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTTSSSSSSSTSPTSSSSSGNTSPSGEVSIRIIGSG- 120
           P+IN + +  L     N N L   T +                    +GEV+IRIIG+G 
Sbjct: 61  PLINSTVSAHL----SNHNRLDDPTVN--------------------NGEVAIRIIGAGE 120

Query: 121 ---EQDPSPALV-GQ----AGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSR- 180
              E+D S  LV GQ     G      + ++GD       +R   V      +QS +   
Sbjct: 121 HEHERDGSGGLVIGQVREGTGQSDVASVALAGDNQGDGRTDRG--VGAGEGVLQSSNGNG 180

Query: 181 VSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISA 240
            +E+G+G   +  RDSSYQRYDIQQ ARWIEQ+LPFSLLLL+VFIRQHL+GFF+TI I+A
Sbjct: 181 DAEAGDGAAVN-GRDSSYQRYDIQQAARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWIAA 240

Query: 241 VMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHRDDLLYPLVMLPPKTVP 300
           VM+KSND+++KQTALKGERK+SVL G SIAF++HV G+YWW   DDLLYPLVMLPPK++P
Sbjct: 241 VMFKSNDVLRKQTALKGERKVSVLIGISIAFMLHVAGVYWWYRNDDLLYPLVMLPPKSIP 300

Query: 301 PFWHALFIILVNDTMVRQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALL 360
           PFWHA+FII+VNDT+VRQ +M LKC LL+YYKN RG N+R+QGQ+LTL+EY +LLYRALL
Sbjct: 301 PFWHAIFIIMVNDTLVRQASMVLKCFLLMYYKNSRGRNYRKQGQLLTLVEYLMLLYRALL 360

Query: 361 PTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYAT 420
           PTPVWYRFFLNK+ GSLFSSL TGLYLTFKLTSVVEK+QSF +A KALS+KEVHYG+YAT
Sbjct: 361 PTPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFSALKALSRKEVHYGAYAT 420

Query: 421 SEQVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTF 480
           +EQV+AAGDLCAICQEKM+APILLRCKHIFCEDCVSEWFERERTCPLCRALVK A+LR+F
Sbjct: 421 TEQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKAADLRSF 462

Query: 481 GDGSTSLLFQLF 483
           GDGSTSL FQ+F
Sbjct: 481 GDGSTSLFFQIF 462

[Close]

BLAST of CmaCh04G000960 vs. TAIR10
Match: AT5G01960.1 (AT5G01960.1 RING/U-box superfamily protein)

HSP 1 Score: 509.2 bits (1310), Expect = 2.7e-144
Identity = 262/395 (66.33%), Postives = 310/395 (78.48%), Query Frame = 1


Query: 88  SSSSSSTSPTSSSSSGNTSPSGEVSIRIIGSGEQDPSPALVGQAGYEQNGGLPVSGDQPE 147
           S S  + +  S  SSG ++  GEV+IRIIG+ EQD   A        + G   + G    
Sbjct: 46  SPSHEAETLVSDDSSGLSN--GEVAIRIIGNTEQD---AETDTNALREPGHSELLGSSAT 105

Query: 148 SPDEERVPLVSTASSSIQSGSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFS 207
             D                G+S+ +       ++ +RDS YQRYDIQQ ARWIEQILPFS
Sbjct: 106 QVDP---------MGGASEGASQAAPGDPAAGDAASRDSPYQRYDIQQAARWIEQILPFS 165

Query: 208 LLLLIVFIRQHLEGFFITICISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIG 267
           LLLL+VFIRQHL+GFF+ I I+AVM+KSNDI+KKQTALKGER IS L G S+AF  HV+G
Sbjct: 166 LLLLVVFIRQHLQGFFVAIWIAAVMFKSNDILKKQTALKGERHISALIGISVAFTAHVVG 225

Query: 268 IYWWCHRDDLLYPLVMLPPKTVPPFWHALFIILVNDTMVRQVAMALKCLLLIYYKNGRGH 327
           +YWW  +DDLLYPL+MLPPK++PPFWHA+FII+VNDT+VRQ +M  KC LL+YYKN RG 
Sbjct: 226 VYWWFRKDDLLYPLIMLPPKSIPPFWHAIFIIVVNDTLVRQASMIFKCFLLMYYKNSRGR 285

Query: 328 NFRRQGQILTLMEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEK 387
           N+R+QGQ+LTL+EY +LLYR+LLPTPVWYRFFLNKD GSLFSSL TGLYLTFKLTSVVEK
Sbjct: 286 NYRKQGQLLTLVEYFMLLYRSLLPTPVWYRFFLNKDYGSLFSSLMTGLYLTFKLTSVVEK 345

Query: 388 IQSFVAAFKALSQKEVHYGSYATSEQVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSE 447
           +QSF  A KALS+KEVHYGSYAT+EQV+AAGDLCAICQEKM+ PILLRCKH+FCEDCVSE
Sbjct: 346 VQSFFTALKALSRKEVHYGSYATTEQVNAAGDLCAICQEKMHTPILLRCKHMFCEDCVSE 405

Query: 448 WFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 483
           WFERERTCPLCRALVKPA+L++FGDGSTSL FQ+F
Sbjct: 406 WFERERTCPLCRALVKPADLKSFGDGSTSLFFQIF 426

[Close]

BLAST of CmaCh04G000960 vs. TAIR10
Match: AT1G65040.2 (AT1G65040.2 RING/U-box superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 3.0e-10
Identity = 45/130 (34.62%), Postives = 64/130 (49.23%), Query Frame = 1


Query: 341 YTLLLYRALLPTPVWYRFFLNKDQG-SLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALS 400
           + L L R LL   ++  FFL       L   L   LY TF+   +  ++  ++   K  S
Sbjct: 214 FYLELVRDLLHLSMYLCFFLMIFMNYGLPLHLIRELYETFRNFKI--RVTDYLRYRKITS 273

Query: 401 QKEVHYGSYATSEQVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCR 460
                +   AT E++S+    C IC+E+M +   L C H+F   C+  W ER+ TCP CR
Sbjct: 274 NMNDRFPD-ATPEELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTCR 333

Query: 461 ALVKPAELRT 470
           ALV PAE  T
Sbjct: 334 ALVVPAENAT 340

[Close]

BLAST of CmaCh04G000960 vs. TAIR10
Match: AT3G16090.1 (AT3G16090.1 RING/U-box superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-09
Identity = 34/95 (35.79%), Postives = 51/95 (53.68%), Query Frame = 1


Query: 375 LYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQVSAAGDLCAICQEKMNAPILL 434
           LY TF+   +  ++  ++   K  S     +   AT E+++A+   C IC+E+M     L
Sbjct: 249 LYETFRNFQI--RVSDYLRYRKITSNMNDRFPD-ATPEELTASDATCIICREEMTNAKKL 308

Query: 435 RCKHIFCEDCVSEWFERERTCPLCRALVKPAELRT 470
            C H+F   C+  W ER++TCP CRALV P E  T
Sbjct: 309 ICGHLFHVHCLRSWLERQQTCPTCRALVVPPENAT 340

[Close]

BLAST of CmaCh04G000960 vs. TAIR10
Match: AT2G42350.1 (AT2G42350.1 RING/U-box superfamily protein)

HSP 1 Score: 54.7 bits (130), Expect = 1.8e-07
Identity = 24/56 (42.86%), Postives = 32/56 (57.14%), Query Frame = 1


Query: 417 AGDLCAIC----QEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELR 469
           AG  CA+C    +EK NA +L  CKH+F   CV  W   + TCP+CR   +P+  R
Sbjct: 96  AGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPR 151

[Close]

BLAST of CmaCh04G000960 vs. TAIR10
Match: AT3G62690.1 (AT3G62690.1 AtL5)

HSP 1 Score: 51.6 bits (122), Expect = 1.6e-06
Identity = 20/50 (40.00%), Postives = 30/50 (60.00%), Query Frame = 1


Query: 421 CAIC----QEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAE 467
           C++C    +E     +L +C H+F  DC+  WF    +CPLCRA V+PA+
Sbjct: 113 CSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQ 162

[Close]

BLAST of CmaCh04G000960 vs. NCBI nr
Match: gi|659114254|ref|XP_008456974.1| (PREDICTED: RING finger and transmembrane domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 827.0 bits (2135), Expect = 1.7e-236
Identity = 436/485 (89.90%), Postives = 454/485 (93.61%), Query Frame = 1


Query: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           METS+SNSDPY NSSSPTT+ TSSRFG+S+PSLNFFRSPLSVILDYSGILPTRAV  ES+
Sbjct: 1   METSSSNSDPYSNSSSPTTARTSSRFGLSLPSLNFFRSPLSVILDYSGILPTRAVRDESD 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTTSSSSSSSTSPTSSSSSGNTSPSGEVSIRIIGSGE 120
           P+IN +ATPDLR +SQNQNHL+ T++SSSS        ++SS NT PSGEVSIRIIGSGE
Sbjct: 61  PVINAAATPDLRGFSQNQNHLIPTSSSSSS-------VTTSSANTIPSGEVSIRIIGSGE 120

Query: 121 QDPSPA--LVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRV-SESGNG 180
           QDPSP+  L  Q GYEQNG LPVSGDQPESPDEERVPLVSTASSSIQSG SRV  ESGNG
Sbjct: 121 QDPSPSALLPNQVGYEQNGRLPVSGDQPESPDEERVPLVSTASSSIQSGGSRVDGESGNG 180

Query: 181 VEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSND 240
           +EESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITI ISAVMYKSND
Sbjct: 181 MEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSND 240

Query: 241 IVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHRDDLLYPLVMLPPKTVPPFWHALF 300
           IVKKQTALKGERKISVLAGTSI FLVHVIGIYWWCH DDLLYPLVMLPPKTVPPFWHALF
Sbjct: 241 IVKKQTALKGERKISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALF 300

Query: 301 IILVNDTMVRQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYR 360
           IILVNDTMVRQ AMALKC LLIYYKNGRGHNFRRQGQILTL+EYTLLLYRALLPTPVWYR
Sbjct: 301 IILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYR 360

Query: 361 FFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQVSAA 420
           FFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALS+KEVHYGSYATSEQV+AA
Sbjct: 361 FFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQVNAA 420

Query: 421 GDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSL 480
           GDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSL
Sbjct: 421 GDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSL 478

Query: 481 LFQLF 483
           LFQLF
Sbjct: 481 LFQLF 478

[Close]

BLAST of CmaCh04G000960 vs. NCBI nr
Match: gi|449457383|ref|XP_004146428.1| (PREDICTED: RING finger and transmembrane domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 820.1 bits (2117), Expect = 2.1e-234
Identity = 433/486 (89.09%), Postives = 453/486 (93.21%), Query Frame = 1


Query: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           METS SNSDPY NSSSPTT+ +SSRF +S+PSLNFFRSPLSVILDYSGILPTRAV HES+
Sbjct: 1   METSPSNSDPYSNSSSPTTARSSSRFALSLPSLNFFRSPLSVILDYSGILPTRAVRHESD 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTTSSSSSSSTSPTS-SSSSGNTSPSGEVSIRIIGSG 120
           P+IN +ATPDLRV+SQNQNHL+ T++ SSS SS + +S ++SS NT PSGEVSIRIIGSG
Sbjct: 61  PVINAAATPDLRVFSQNQNHLIHTSSPSSSPSSVTTSSVTTSSANTIPSGEVSIRIIGSG 120

Query: 121 EQDPSPA--LVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVS-ESGN 180
           EQDPSP   L  Q  YEQNG LPVSGDQPESPDEERVPLVST SSSIQ G +RV  ESGN
Sbjct: 121 EQDPSPRALLPNQVVYEQNGRLPVSGDQPESPDEERVPLVSTTSSSIQPGGTRVDGESGN 180

Query: 181 GVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSN 240
           G+EESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITI ISAVMYKSN
Sbjct: 181 GMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSN 240

Query: 241 DIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHRDDLLYPLVMLPPKTVPPFWHAL 300
           DIVKKQTALKGER+ISVLAGTSI FLVHVIGIYWWCH DDLLYPLVMLPPKTVPPFWHAL
Sbjct: 241 DIVKKQTALKGERRISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHAL 300

Query: 301 FIILVNDTMVRQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWY 360
           FIILVNDTMVRQ AMALKC LLIYYKNGRGHNFRRQGQILTL+EYTLLLYRALLPTPVWY
Sbjct: 301 FIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWY 360

Query: 361 RFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQVSA 420
           RFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFV AFKALSQKEVHYGSYATSEQV+A
Sbjct: 361 RFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVTAFKALSQKEVHYGSYATSEQVNA 420

Query: 421 AGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTS 480
           AGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTS
Sbjct: 421 AGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTS 480

Query: 481 LLFQLF 483
           LLFQLF
Sbjct: 481 LLFQLF 486

[Close]

BLAST of CmaCh04G000960 vs. NCBI nr
Match: gi|694373140|ref|XP_009363774.1| (PREDICTED: RING finger and transmembrane domain-containing protein 2-like [Pyrus x bretschneideri])

HSP 1 Score: 585.1 bits (1507), Expect = 1.1e-163
Identity = 316/494 (63.97%), Postives = 379/494 (76.72%), Query Frame = 1


Query: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           ME S+ N  P    ++   S TSS   +  P+L FF+SPLS +LDYSGIL   +   +S+
Sbjct: 1   MEASSGNGSPATGGATGVGSNTSSFGSMQFPALRFFQSPLSFVLDYSGILSPSSSRRDSD 60

Query: 61  -PIINGSATPDLRVYSQNQNHLMTTTTSSSSSSSTSPTSSSSSGNTSPSGEVSIRIIGSG 120
            P++N     D      +Q H  T  TS SS++                GEVSIRIIG+G
Sbjct: 61  APVVNAVVVAD------SQPHSPTACTSGSSNT----------------GEVSIRIIGAG 120

Query: 121 EQDP---SPALVGQAGYEQNGGLP--------VSGDQPESPDEERVPLVSTASSSIQSGS 180
           EQ+      A V   G E+N G P        ++G       +ERVPLV+++S +     
Sbjct: 121 EQEDRGNGGATVPVQG-EENDGSPGRVQSLDDLAGTVNGVGSDERVPLVASSSPT----- 180

Query: 181 SRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICI 240
               ++GNG E+S +RDS+YQRYDIQQ+ARWIEQILPFSLLLL+VFIRQHL+GFF+TI +
Sbjct: 181 -HAGDTGNGAEDS-SRDSAYQRYDIQQIARWIEQILPFSLLLLVVFIRQHLQGFFVTIWV 240

Query: 241 SAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHRDDLLYPLVMLPPKT 300
           SAVMY+SND+VKKQT+LKG+RKISVL   + AF++HV+ +YWW   DDLLYPL MLPPKT
Sbjct: 241 SAVMYRSNDVVKKQTSLKGDRKISVLVSIAGAFMLHVVVVYWWYRSDDLLYPLAMLPPKT 300

Query: 301 VPPFWHALFIILVNDTMVRQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRA 360
           +PPFWHA+FIILVNDTMVRQ AMA KCLLLIYYKNGRGHN+RRQGQ+LT++EYTLLLYRA
Sbjct: 301 IPPFWHAIFIILVNDTMVRQAAMAFKCLLLIYYKNGRGHNYRRQGQMLTVIEYTLLLYRA 360

Query: 361 LLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSY 420
           LLP PVWYRFFLNKD GSLFSSLTTGLYLTFKLTSVVEK+QSF+A+ +ALS+K++HYGS+
Sbjct: 361 LLPAPVWYRFFLNKDNGSLFSSLTTGLYLTFKLTSVVEKVQSFLASIRALSRKDIHYGSH 420

Query: 421 ATSEQVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELR 480
           AT EQV+AAGDLCAICQEKM+APILLRCKHIFCEDCVSEWFERERTCPLCRALVKPA+LR
Sbjct: 421 ATLEQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLR 464

Query: 481 TFGDGSTSLLFQLF 483
           T+GDGSTSL+FQLF
Sbjct: 481 TYGDGSTSLIFQLF 464

[Close]

BLAST of CmaCh04G000960 vs. NCBI nr
Match: gi|645256886|ref|XP_008234157.1| (PREDICTED: RING finger and transmembrane domain-containing protein 2-like [Prunus mume])

HSP 1 Score: 580.9 bits (1496), Expect = 2.1e-162
Identity = 317/498 (63.65%), Postives = 377/498 (75.70%), Query Frame = 1


Query: 1   METSASNSDPYPNSSSPTTSPTSSRFG-VSIPSLNFFRSPLSVILDYSGILPTRAVPHES 60
           ME S  N+ P    ++   S +++ FG +  P+L FF+SPLS +LDYSGIL   +  HE+
Sbjct: 1   MEASPGNTSPTSGGNTGNNSNSTTSFGSMQFPALRFFQSPLSFVLDYSGILSPSSSRHEA 60

Query: 61  E-PIINGSATPDLRVYSQNQNHLMTTTTSSSSSSSTSPTSSSSSGNTSPSGEVSIRIIGS 120
           + P++N     D R +S +                     +S S NT   GEVSIRIIG+
Sbjct: 61  DAPVVNAVVVADSRPHSPS-------------------ACTSGSSNT---GEVSIRIIGA 120

Query: 121 GEQDP---SPALVGQAGYEQNGGLPVSGDQPESPDE-----------ERVPLVSTASSSI 180
           GEQ+      A V   G    G L  SG + +S D            ERVPLV    SS 
Sbjct: 121 GEQEDRGNGAATVPFHGDGNGGSLGHSG-RVQSLDNLAGTVNGVGSGERVPLVPP--SSP 180

Query: 181 QSGSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFI 240
           + G   V ++G+GV+ + +RDS+YQRYDIQQ+ARWIEQ+LPFSLLLL+VFIRQHL+GFF+
Sbjct: 181 EHGRD-VGDTGDGVDNN-SRDSAYQRYDIQQIARWIEQVLPFSLLLLVVFIRQHLQGFFV 240

Query: 241 TICISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHRDDLLYPLVML 300
           TI +SAVMY+SND+V+KQTALKG+RKI VL G + AF++HV+G+YWW   DDLLYPL ML
Sbjct: 241 TIWVSAVMYRSNDVVRKQTALKGDRKIPVLLGIAAAFMLHVVGVYWWYRSDDLLYPLAML 300

Query: 301 PPKTVPPFWHALFIILVNDTMVRQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLL 360
           PPK +PPFWHA+FIILVNDTMVRQ  MALKCLLLIYYKNGRGHN+RRQGQILT++EYTLL
Sbjct: 301 PPKAIPPFWHAIFIILVNDTMVRQATMALKCLLLIYYKNGRGHNYRRQGQILTVVEYTLL 360

Query: 361 LYRALLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVH 420
           LYRALLP PVWYRFFLNKD GSLFSSLTTGLYLTFKLTSVVEK+QSF A+ +ALS+K++H
Sbjct: 361 LYRALLPAPVWYRFFLNKDNGSLFSSLTTGLYLTFKLTSVVEKVQSFFASIRALSRKDIH 420

Query: 421 YGSYATSEQVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 480
           YG+YAT EQV+AAGDLCAICQEKM+APILLRCKHIFCEDCVSEWFERERTCPLCRALVKP
Sbjct: 421 YGAYATLEQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 471

Query: 481 AELRTFGDGSTSLLFQLF 483
           A+LRTFGDGSTSL FQ F
Sbjct: 481 ADLRTFGDGSTSLFFQFF 471

[Close]

BLAST of CmaCh04G000960 vs. NCBI nr
Match: gi|595999086|ref|XP_007217960.1| (hypothetical protein PRUPE_ppa005231mg [Prunus persica])

HSP 1 Score: 578.6 bits (1490), Expect = 1.0e-161
Identity = 316/498 (63.45%), Postives = 376/498 (75.50%), Query Frame = 1


Query: 1   METSASNSDPYPNSSSPTTSPTSSRFG-VSIPSLNFFRSPLSVILDYSGILPTRAVPHES 60
           ME S  N+ P    ++   S +++ FG +  P+L FF+SPLS +LDYSGIL   +  HE+
Sbjct: 1   MEASPGNTSPTSGGNTGNNSNSTTSFGSMQFPALRFFQSPLSFVLDYSGILSPSSSRHEA 60

Query: 61  E-PIINGSATPDLRVYSQNQNHLMTTTTSSSSSSSTSPTSSSSSGNTSPSGEVSIRIIGS 120
           + P++N     D R +S +                     +S S NT   GEVSIRIIG+
Sbjct: 61  DAPVVNAVVVADSRPHSPS-------------------ACTSGSSNT---GEVSIRIIGA 120

Query: 121 GEQDP---SPALVGQAGYEQNGGLPVSGDQPESPDE-----------ERVPLVSTASSSI 180
           GEQ+      A V   G    G L  SG + +S D            ERVPLV    SS 
Sbjct: 121 GEQEDRGNGAATVPFHGDGNGGSLGHSG-RVQSLDNLAGTVNGVGSGERVPLVPP--SSP 180

Query: 181 QSGSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFI 240
           + G   V ++G+GV+ + +RDS+YQRYDIQQ+ARWIEQ+LPFSLLLL+VFIRQHL+GFF+
Sbjct: 181 EHGRD-VGDTGDGVDNN-SRDSAYQRYDIQQIARWIEQVLPFSLLLLVVFIRQHLQGFFV 240

Query: 241 TICISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHRDDLLYPLVML 300
           TI +SAVMY+SND+V+KQTALKG+RKI VL   + AF++HV+G+YWW   DDLLYPL ML
Sbjct: 241 TIWVSAVMYRSNDVVRKQTALKGDRKIPVLLSIAAAFMLHVVGVYWWYRSDDLLYPLAML 300

Query: 301 PPKTVPPFWHALFIILVNDTMVRQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLL 360
           PPK +PPFWHA+FIILVNDTMVRQ  MALKCLLLIYYKNGRGHN+RRQGQILT++EYTLL
Sbjct: 301 PPKAIPPFWHAIFIILVNDTMVRQATMALKCLLLIYYKNGRGHNYRRQGQILTVVEYTLL 360

Query: 361 LYRALLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVH 420
           LYRALLP PVWYRFFLNKD GSLFSSLTTGLYLTFKLTSVVEK+QSF A+ +ALS+K++H
Sbjct: 361 LYRALLPAPVWYRFFLNKDNGSLFSSLTTGLYLTFKLTSVVEKVQSFFASIRALSRKDIH 420

Query: 421 YGSYATSEQVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 480
           YG+YAT EQV+AAGDLCAICQEKM+APILLRCKHIFCEDCVSEWFERERTCPLCRALVKP
Sbjct: 421 YGAYATLEQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 471

Query: 481 AELRTFGDGSTSLLFQLF 483
           A+LRTFGDGSTSL FQ F
Sbjct: 481 ADLRTFGDGSTSLFFQFF 471

The following BLAST results are available for this feature:

BLAST of CmaCh04G000960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RNFT2_HUMAN	2.8e-34	30.51	RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens GN=RNF...	[more]
RNFT2_PONAB	5.4e-33	30.17	RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii GN=RNF...	[more]
RNFT1_DANRE	1.6e-32	28.17	RING finger and transmembrane domain-containing protein 1 OS=Danio rerio GN=rnft...	[more]
RNFT2_MOUSE	1.3e-31	29.06	RING finger and transmembrane domain-containing protein 2 OS=Mus musculus GN=Rnf...	[more]
RNFT1_HUMAN	8.0e-29	27.11	RING finger and transmembrane domain-containing protein 1 OS=Homo sapiens GN=RNF...	[more]

BLAST of CmaCh04G000960 vs. TrEMBL


Match Name	E-value	Identity	Description
M5WZS0_PRUPE	7.3e-162	63.45	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005231mg PE=4 SV=1	[more]
M5WHB2_PRUPE	2.3e-155	60.97	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005202mg PE=4 SV=1	[more]
A0A067JDD7_JATCU	2.3e-155	60.69	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00624 PE=4 SV=1	[more]
A0A151SG05_CAJCA	3.0e-155	64.75	Ring finger and transmembrane domain-containing protein 2 OS=Cajanus cajan GN=KK...	[more]
V4S607_9ROSI	5.0e-155	61.59	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011668mg PE=4 SV=1	[more]

BLAST of CmaCh04G000960 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G01960.1	2.7e-144	66.33	RING/U-box superfamily protein	[more]
AT1G65040.2	3.0e-10	34.62	RING/U-box superfamily protein	[more]
AT3G16090.1	1.5e-09	35.79	RING/U-box superfamily protein	[more]
AT2G42350.1	1.8e-07	42.86	RING/U-box superfamily protein	[more]
AT3G62690.1	1.6e-06	40.00	AtL5	[more]

BLAST of CmaCh04G000960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114254\|ref\|XP_008456974.1\|	1.7e-236	89.90	PREDICTED: RING finger and transmembrane domain-containing protein 1-like [Cucum...	[more]
gi\|449457383\|ref\|XP_004146428.1\|	2.1e-234	89.09	PREDICTED: RING finger and transmembrane domain-containing protein 1-like [Cucum...	[more]
gi\|694373140\|ref\|XP_009363774.1\|	1.1e-163	63.97	PREDICTED: RING finger and transmembrane domain-containing protein 2-like [Pyrus...	[more]
gi\|645256886\|ref\|XP_008234157.1\|	2.1e-162	63.65	PREDICTED: RING finger and transmembrane domain-containing protein 2-like [Prunu...	[more]
gi\|595999086\|ref\|XP_007217960.1\|	1.0e-161	63.45	hypothetical protein PRUPE_ppa005231mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR017907	Znf_RING_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G000960.1	CmaCh04G000960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 420..459 score: 3.3
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 421..458 score: 5.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 421..459 score: 13
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 419..468 score: 1.3
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 436..445 scor
None	No IPR available	PANTHER	PTHR15860	UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN	coord: 170..482 score: 9.9E-261coord: 1..61 score: 9.9E-261coord: 91..152 score: 9.9E
None	No IPR available	PANTHER	PTHR15860:SF4	SUBFAMILY NOT NAMED	coord: 91..152 score: 9.9E-261coord: 170..482 score: 9.9E-261coord: 1..61 score: 9.9E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 414..464 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G000960	Cucsa.143770	Cucumber (Gy14) v1	cgycmaB0401
CmaCh04G000960	MELO3C020174	Melon (DHL92) v3.5.1	cmameB643
CmaCh04G000960	ClCG07G005290	Watermelon (Charleston Gray)	cmawcgB674
CmaCh04G000960	CSPI05G11720	Wild cucumber (PI 183967)	cmacpiB757
CmaCh04G000960	CmoCh04G000960	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G000960	CmoCh04G011200	Cucurbita moschata (Rifu)	cmacmoB730
CmaCh04G000960	Lsi04G010050	Bottle gourd (USVL1VR-Ls)	cmalsiB671
CmaCh04G000960	Cp4.1LG01g07150	Cucurbita pepo (Zucchini)	cmacpeB722
CmaCh04G000960	Cp4.1LG01g05880	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G000960	MELO3C020174.2	Melon (DHL92) v3.6.1	cmamedB743
CmaCh04G000960	CsaV3_5G011140	Cucumber (Chinese Long) v3	cmacucB0883
CmaCh04G000960	Cla97C07G133660	Watermelon (97103) v2	cmawmbB781
CmaCh04G000960	Bhi07G000398	Wax gourd	cmawgoB0890
CmaCh04G000960	CsGy5G008980	Cucumber (Gy14) v2	cgybcmaB674
CmaCh04G000960	Carg24464	Silver-seed gourd	carcmaB1249
CmaCh04G000960	Carg00155	Silver-seed gourd	carcmaB0949

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G000960	CmaCh04G010530	Cucurbita maxima (Rimu)	cmacmaB531

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G000960	Wild cucumber (PI 183967)	cmacpiB740
CmaCh04G000960	Cucumber (Chinese Long) v2	cmacuB747
CmaCh04G000960	Watermelon (97103) v1	cmawmB691
CmaCh04G000960	Bottle gourd (USVL1VR-Ls)	cmalsiB660
CmaCh04G000960	Cucumber (Gy14) v2	cgybcmaB660
CmaCh04G000960	Cucumber (Chinese Long) v3	cmacucB0873
CmaCh04G000960	Cucumber (Chinese Long) v3	cmacucB0894
CmaCh04G000960	Watermelon (97103) v2	cmawmbB729
CmaCh04G000960	Cucumber (Gy14) v1	cgycmaB0493