CsaV3_5G005890 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G005890
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	dehydration-responsive element-binding protein 1D-like
Location	chr5 : 3899628 .. 3900230 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTTCTGATGCTTCTTCGTCTTCCCATCGTTCCACTCTTTCCGACGACGAGCTTCTTCTGGCGTCTCGATACCCCAAGAAGCGAGCGGGGAGAAAGAAGTTTAAGGAAACTCGTCATCCTATTTATCGTGGTGTGCGACTGAGGAATTCTGGTAAGTGGGTTTGTGAAGTTAGAGAGCCTAATAAGAAGACACGGATTTGGCTTGGAACTTTCCCCACTGCTGAGATGGCTGCTCGAGCTCATGATGTGGCTGCCATCGCTCTTAGGGGAAGGTCGGCTTGTCTTAATTTTGCTGACTCTGCTTCCACGCTTCACATTCCGGCTAGTGTTGATCCTAAGGATATTCAGAGGGCTGCGGCGGAGGCTGCCGAGGCATTCCGGCCGCAGGATGATGAGTTGACGCCGGCGGTGGTGGAAGAGGAGGGGTTTTATTTGGATGAGGAAGTGGAGTTTGGGATGCCCGGGTTGTTGACGGATATGGCGGAGGCAATGTTGTTGCCGCCGCCCAATTGTGTGGGGAATTACGACAATGACCACTTTGGGGCTAATTCTATGGATTTTGATGCCGACATGTCGTTGTGGAGTTACTCCATTTGA

mRNA sequence

ATGGATTTTTCTGATGCTTCTTCGTCTTCCCATCGTTCCACTCTTTCCGACGACGAGCTTCTTCTGGCGTCTCGATACCCCAAGAAGCGAGCGGGGAGAAAGAAGTTTAAGGAAACTCGTCATCCTATTTATCGTGGTGTGCGACTGAGGAATTCTGGTAAGTGGGTTTGTGAAGTTAGAGAGCCTAATAAGAAGACACGGATTTGGCTTGGAACTTTCCCCACTGCTGAGATGGCTGCTCGAGCTCATGATGTGGCTGCCATCGCTCTTAGGGGAAGGTCGGCTTGTCTTAATTTTGCTGACTCTGCTTCCACGCTTCACATTCCGGCTAGTGTTGATCCTAAGGATATTCAGAGGGCTGCGGCGGAGGCTGCCGAGGCATTCCGGCCGCAGGATGATGAGTTGACGCCGGCGGTGGTGGAAGAGGAGGGGTTTTATTTGGATGAGGAAGTGGAGTTTGGGATGCCCGGGTTGTTGACGGATATGGCGGAGGCAATGTTGTTGCCGCCGCCCAATTGTGTGGGGAATTACGACAATGACCACTTTGGGGCTAATTCTATGGATTTTGATGCCGACATGTCGTTGTGGAGTTACTCCATTTGA

Coding sequence (CDS)

ATGGATTTTTCTGATGCTTCTTCGTCTTCCCATCGTTCCACTCTTTCCGACGACGAGCTTCTTCTGGCGTCTCGATACCCCAAGAAGCGAGCGGGGAGAAAGAAGTTTAAGGAAACTCGTCATCCTATTTATCGTGGTGTGCGACTGAGGAATTCTGGTAAGTGGGTTTGTGAAGTTAGAGAGCCTAATAAGAAGACACGGATTTGGCTTGGAACTTTCCCCACTGCTGAGATGGCTGCTCGAGCTCATGATGTGGCTGCCATCGCTCTTAGGGGAAGGTCGGCTTGTCTTAATTTTGCTGACTCTGCTTCCACGCTTCACATTCCGGCTAGTGTTGATCCTAAGGATATTCAGAGGGCTGCGGCGGAGGCTGCCGAGGCATTCCGGCCGCAGGATGATGAGTTGACGCCGGCGGTGGTGGAAGAGGAGGGGTTTTATTTGGATGAGGAAGTGGAGTTTGGGATGCCCGGGTTGTTGACGGATATGGCGGAGGCAATGTTGTTGCCGCCGCCCAATTGTGTGGGGAATTACGACAATGACCACTTTGGGGCTAATTCTATGGATTTTGATGCCGACATGTCGTTGTGGAGTTACTCCATTTGA

Protein sequence

MDFSDASSSSHRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRAAAEAAEAFRPQDDELTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNCVGNYDNDHFGANSMDFDADMSLWSYSI

Homology

[Close]

BLAST of CsaV3_5G005890 vs. NCBI nr
Match: XP_004143704.1 (PREDICTED: dehydration-responsive element-binding protein 1B-like [Cucumis sativus] >KGN50431.1 AP2/ERF domain-containing transcription factor [Cucumis sativus])

HSP 1 Score: 401.7 bits (1031), Expect = 1.4e-108
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MDFSDASSSSHRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVR 60
           MDFSDASSSSHRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVR
Sbjct: 1   MDFSDASSSSHRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVR 60

Query: 61  EPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRA 120
           EPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRA
Sbjct: 61  EPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRA 120

Query: 121 AAEAAEAFRPQDDELTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNCVGNYDND 180
           AAEAAEAFRPQDDELTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNCVGNYDND
Sbjct: 121 AAEAAEAFRPQDDELTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNCVGNYDND 180

Query: 181 HFGANSMDFDADMSLWSYSI 201
           HFGANSMDFDADMSLWSYSI
Sbjct: 181 HFGANSMDFDADMSLWSYSI 200

[Close]

BLAST of CsaV3_5G005890 vs. NCBI nr
Match: XP_008467214.1 (PREDICTED: dehydration-responsive element-binding protein 1D-like [Cucumis melo])

HSP 1 Score: 380.2 bits (975), Expect = 4.4e-102
Identity = 194/202 (96.04%), Postives = 195/202 (96.53%), Query Frame = 0


Query: 1   MDFSDASSSSHRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVR 60
           M+ SDASSSSHRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVR
Sbjct: 1   MELSDASSSSHRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVR 60

Query: 61  EPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRA 120
           EPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRA
Sbjct: 61  EPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRA 120

Query: 121 AAEAAEAFRPQDDE--LTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNCVGNYD 180
           AAEAAEAFRP DD   L PAVV EEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNCVGNYD
Sbjct: 121 AAEAAEAFRPPDDHEYLRPAVV-EEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNCVGNYD 180

Query: 181 NDHFGANSMDFDADMSLWSYSI 201
           NDHFGANSMDFDADMSLWSYSI
Sbjct: 181 NDHFGANSMDFDADMSLWSYSI 201

[Close]

BLAST of CsaV3_5G005890 vs. NCBI nr
Match: XP_022995351.1 (dehydration-responsive element-binding protein 1E-like [Cucurbita maxima])

HSP 1 Score: 278.1 bits (710), Expect = 2.4e-71
Identity = 154/207 (74.40%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 1   MDFSDASSSS-------HRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSG 60
           MDF DASSSS                 LLASR+PKKRAGRKKFKETRHP+YRGVR RNSG
Sbjct: 1   MDFPDASSSSXXXXXXXXXXXXXXXXXLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSG 60

Query: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVD 120
           KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADS S L  PAS+D
Sbjct: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLD 120

Query: 121 PKDIQRAAAEAAEAFRPQDDELTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNC 180
           PKDIQRAAAEAAEAFRP   E  PA   E+ F  D +    MPG L DMAEAMLLPPPNC
Sbjct: 121 PKDIQRAAAEAAEAFRP--PETAPA---EDMFCFDND---AMPGFLADMAEAMLLPPPNC 180

Query: 181 VGNYDNDHFGANSMDFDADMSLWSYSI 201
           V   D+D +G NSMDFDADMSLWSYSI
Sbjct: 181 VAT-DHDDYGPNSMDFDADMSLWSYSI 198

[Close]

BLAST of CsaV3_5G005890 vs. NCBI nr
Match: XP_022957955.1 (dehydration-responsive element-binding protein 1E-like [Cucurbita moschata] >XP_023534132.1 dehydration-responsive element-binding protein 1E-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.3 bits (708), Expect = 4.0e-71
Identity = 154/207 (74.40%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 1   MDFSDASSSS-------HRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSG 60
           MDF DASSSS                 LLASR+PKKRAGRKKFKETRHP+YRGVR RNSG
Sbjct: 1   MDFPDASSSSXXXXXXXXXXXXXXXXXLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSG 60

Query: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVD 120
           KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADS S L  PAS+D
Sbjct: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLD 120

Query: 121 PKDIQRAAAEAAEAFRPQDDELTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNC 180
           PKDIQRAAAEAAEAFRP   E  PA   E+ F  D +    MPG L DMAEAMLLPPPNC
Sbjct: 121 PKDIQRAAAEAAEAFRP--PETAPA---EDMFCFDND---EMPGFLADMAEAMLLPPPNC 180

Query: 181 VGNYDNDHFGANSMDFDADMSLWSYSI 201
           V   D+D +G NSMDFDADMSLWSYSI
Sbjct: 181 VAT-DHDDYGPNSMDFDADMSLWSYSI 198

[Close]

BLAST of CsaV3_5G005890 vs. NCBI nr
Match: XP_018830708.1 (PREDICTED: dehydration-responsive element-binding protein 1D [Juglans regia])

HSP 1 Score: 266.2 bits (679), Expect = 9.3e-68
Identity = 148/212 (69.81%), Postives = 161/212 (75.94%), Query Frame = 0


Query: 2   DFSDASSSSHRS-----TLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWV 61
           DF   S  S  S      LSD+E+LLASR PKKRAGRKKFKETRHP+YRGVR RNSGKWV
Sbjct: 3   DFFQYSPDSEGSCGRVVNLSDEEVLLASRNPKKRAGRKKFKETRHPVYRGVRRRNSGKWV 62

Query: 62  CEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKD 121
           CEVREPNKK+RIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSAS L  PAS + KD
Sbjct: 63  CEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASKLPRPASGEAKD 122

Query: 122 IQRAAAEAAEAFRPQD--DELTPAVVEEEG------FYLDEEVEFGMPGLLTDMAEAMLL 181
           IQR AAEAAEAFRP D  D  +  V E E       F++DEE  FGMPGLL +MAEAMLL
Sbjct: 123 IQRTAAEAAEAFRPADLMDTSSETVAENERQSSEGVFFMDEEAVFGMPGLLANMAEAMLL 182

Query: 182 PPPNCVGNYDNDHFGANSMDFDADMSLWSYSI 201
           PPP C G  D+   G + ++  ADMSLWSYSI
Sbjct: 183 PPPYCAG--DDAFSGGDDVEASADMSLWSYSI 212

[Close]

BLAST of CsaV3_5G005890 vs. TAIR10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1)

HSP 1 Score: 216.1 bits (549), Expect = 2.0e-56
Identity = 127/213 (59.62%), Postives = 143/213 (67.14%), Query Frame = 0


Query: 3   FSDASSSSHRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVREP 62
           FS+   S +     D    LA+  PKK AGRKKF+ETRHPIYRGVR RNSGKWV EVREP
Sbjct: 7   FSEMFGSDYEPQGGDYCPTLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREP 66

Query: 63  NKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRAAA 122
           NKKTRIWLGTF TAEMAARAHDVAA+ALRGRSACLNFADSA  L IP S   KDIQ+AAA
Sbjct: 67  NKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAA 126

Query: 123 EAAEAFRPQDDELT---------PAVVE--------EEGFYLDEEVEFGMPGLLTDMAEA 182
           EAA AF+ +  + T           +VE        E  FY+DEE  FGMP LL +MAE 
Sbjct: 127 EAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEG 186

Query: 183 MLLPPPNCVGNYDNDHFGANSMDFDADMSLWSY 199
           MLLPPP+   N++ D  G      D D+SLWSY
Sbjct: 187 MLLPPPSVQWNHNYDGEG------DGDVSLWSY 213

[Close]

BLAST of CsaV3_5G005890 vs. TAIR10
Match: AT5G51990.1 (C-repeat-binding factor 4)

HSP 1 Score: 215.7 bits (548), Expect = 2.6e-56
Identity = 126/216 (58.33%), Postives = 143/216 (66.20%), Query Frame = 0


Query: 7   SSSSHRSTLSDDELL---LASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVREPN 66
           S S HRS +SD       LAS  PKKRAGRKKF+ETRHPIYRGVR RNSGKWVCEVREPN
Sbjct: 14  SISDHRSPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKWVCEVREPN 73

Query: 67  KKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRAAAE 126
           KK+RIWLGTFPT EMAARAHDVAA+ALRGRSACLNFADSA  L IP +  PK+IQ+AA+E
Sbjct: 74  KKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCPKEIQKAASE 133

Query: 127 AAEAFRPQ---DDELTPAVVEE-------EG-----------FYLDEEVEFGMPGLLTDM 186
           AA AF+ +   +   T A  EE       EG           FY+D+E   GMP    +M
Sbjct: 134 AAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEALLGMPNFFENM 193

Query: 187 AEAMLLPPPNCVGNYDNDHFGANSMDFDADMSLWSY 199
           AE MLLPPP    N+       N  D   D+SLWS+
Sbjct: 194 AEGMLLPPPEVGWNH-------NDFDGVGDVSLWSF 222

[Close]

BLAST of CsaV3_5G005890 vs. TAIR10
Match: AT4G25480.1 (dehydration response element B1A)

HSP 1 Score: 212.2 bits (539), Expect = 2.9e-55
Identity = 125/215 (58.14%), Postives = 146/215 (67.91%), Query Frame = 0


Query: 3   FSDASSSSHRSTLS---DDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEV 62
           FS+   S + S++S   D    LAS  PKK AGRKKF+ETRHPIYRGVR RNSGKWVCEV
Sbjct: 7   FSEMFGSDYESSVSSGGDYIPTLASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEV 66

Query: 63  REPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQR 122
           REPNKKTRIWLGTF TAEMAARAHDVAA+ALRGRSACLNFADSA  L IP S   KDIQ+
Sbjct: 67  REPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQK 126

Query: 123 AAAEAAEAFRPQ------------DDELTPAVV----EEEGFYLDEEVEFGMPGLLTDMA 182
           AAAEAA AF+ +            ++ L  A+      E  FY+ +E  F MP LL +MA
Sbjct: 127 AAAEAALAFQDEMCDATTDHGFDMEETLVEAIYTAEQSENAFYMHDEAMFEMPSLLANMA 186

Query: 183 EAMLLPPPNCVGNYDNDHFGANSMDFDADMSLWSY 199
           E MLLP P+   N++++  G      D D+SLWSY
Sbjct: 187 EGMLLPLPSVQWNHNHEVDGD-----DDDVSLWSY 216

[Close]

BLAST of CsaV3_5G005890 vs. TAIR10
Match: AT4G25470.1 (C-repeat/DRE binding factor 2)

HSP 1 Score: 210.3 bits (534), Expect = 1.1e-54
Identity = 123/216 (56.94%), Postives = 145/216 (67.13%), Query Frame = 0


Query: 3   FSDASSSSHRSTLS---DDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEV 62
           FS+   S + S +S   D    LA+  PKK AGRKKF+ETRHPIYRGVR RNSGKWVCE+
Sbjct: 7   FSEMFGSDYESPVSSGGDYSPKLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCEL 66

Query: 63  REPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQR 122
           REPNKKTRIWLGTF TAEMAARAHDVAAIALRGRSACLNFADSA  L IP S   K+IQ+
Sbjct: 67  REPNKKTRIWLGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLRIPESTCAKEIQK 126

Query: 123 AAAEAAEAFRPQ-------------DDELTPAVV----EEEGFYLDEEVEFGMPGLLTDM 182
           AAAEAA  F+ +             ++ L  A+      ++ FY+DEE   GM  LL +M
Sbjct: 127 AAAEAALNFQDEMCHMTTDAHGLDMEETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNM 186

Query: 183 AEAMLLPPPNCVGNYDNDHFGANSMDFDADMSLWSY 199
           AE MLLP P+   NY+ D      ++ D D+SLWSY
Sbjct: 187 AEGMLLPSPSVQWNYNFD------VEGDDDVSLWSY 216

[Close]

BLAST of CsaV3_5G005890 vs. TAIR10
Match: AT1G63030.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 181.4 bits (459), Expect = 5.5e-46
Identity = 95/184 (51.63%), Postives = 126/184 (68.48%), Query Frame = 0


Query: 15  LSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVREPNKKTRIWLGTFP 74
           + +D++ +A   PKKRAGR+ FKETRHPIYRGVR R+  KWVCEVREP  + R+WLGT+P
Sbjct: 1   MENDDITVAEMKPKKRAGRRIFKETRHPIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYP 60

Query: 75  TAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRAAAEAAEAFRPQDDE 134
           TA+MAARAHDVA +ALRGRSACLNF+DSA  L +PAS DP  I+R AAEAAE FRP +  
Sbjct: 61  TADMAARAHDVAVLALRGRSACLNFSDSAWRLPVPASTDPDTIRRTAAEAAEMFRPPEFS 120

Query: 135 LTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNCVGNYDNDHFGANSMDFDADMS 194
               V+     +  +  + G+ G++  +AE  L+ PP    + +   +    M ++ D+S
Sbjct: 121 TGITVLPSASEF--DTSDEGVAGMMMRLAEEPLMSPPRSYIDMNTSVYVDEEMCYE-DLS 180

Query: 195 LWSY 199
           LWSY
Sbjct: 181 LWSY 181

[Close]

BLAST of CsaV3_5G005890 vs. Swiss-Prot
Match: sp|P93835|DRE1B_ARATH (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 216.1 bits (549), Expect = 3.6e-55
Identity = 127/213 (59.62%), Postives = 143/213 (67.14%), Query Frame = 0


Query: 3   FSDASSSSHRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVREP 62
           FS+   S +     D    LA+  PKK AGRKKF+ETRHPIYRGVR RNSGKWV EVREP
Sbjct: 7   FSEMFGSDYEPQGGDYCPTLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREP 66

Query: 63  NKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRAAA 122
           NKKTRIWLGTF TAEMAARAHDVAA+ALRGRSACLNFADSA  L IP S   KDIQ+AAA
Sbjct: 67  NKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAA 126

Query: 123 EAAEAFRPQDDELT---------PAVVE--------EEGFYLDEEVEFGMPGLLTDMAEA 182
           EAA AF+ +  + T           +VE        E  FY+DEE  FGMP LL +MAE 
Sbjct: 127 EAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEG 186

Query: 183 MLLPPPNCVGNYDNDHFGANSMDFDADMSLWSY 199
           MLLPPP+   N++ D  G      D D+SLWSY
Sbjct: 187 MLLPPPSVQWNHNYDGEG------DGDVSLWSY 213

[Close]

BLAST of CsaV3_5G005890 vs. Swiss-Prot
Match: sp|Q9FJ93|DRE1D_ARATH (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.7e-55
Identity = 126/216 (58.33%), Postives = 143/216 (66.20%), Query Frame = 0


Query: 7   SSSSHRSTLSDDELL---LASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVREPN 66
           S S HRS +SD       LAS  PKKRAGRKKF+ETRHPIYRGVR RNSGKWVCEVREPN
Sbjct: 14  SISDHRSPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKWVCEVREPN 73

Query: 67  KKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRAAAE 126
           KK+RIWLGTFPT EMAARAHDVAA+ALRGRSACLNFADSA  L IP +  PK+IQ+AA+E
Sbjct: 74  KKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCPKEIQKAASE 133

Query: 127 AAEAFRPQ---DDELTPAVVEE-------EG-----------FYLDEEVEFGMPGLLTDM 186
           AA AF+ +   +   T A  EE       EG           FY+D+E   GMP    +M
Sbjct: 134 AAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEALLGMPNFFENM 193

Query: 187 AEAMLLPPPNCVGNYDNDHFGANSMDFDADMSLWSY 199
           AE MLLPPP    N+       N  D   D+SLWS+
Sbjct: 194 AEGMLLPPPEVGWNH-------NDFDGVGDVSLWSF 222

[Close]

BLAST of CsaV3_5G005890 vs. Swiss-Prot
Match: sp|Q9M0L0|DRE1A_ARATH (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=DREB1A PE=1 SV=2)

HSP 1 Score: 212.2 bits (539), Expect = 5.2e-54
Identity = 125/215 (58.14%), Postives = 146/215 (67.91%), Query Frame = 0


Query: 3   FSDASSSSHRSTLS---DDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEV 62
           FS+   S + S++S   D    LAS  PKK AGRKKF+ETRHPIYRGVR RNSGKWVCEV
Sbjct: 7   FSEMFGSDYESSVSSGGDYIPTLASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEV 66

Query: 63  REPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQR 122
           REPNKKTRIWLGTF TAEMAARAHDVAA+ALRGRSACLNFADSA  L IP S   KDIQ+
Sbjct: 67  REPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQK 126

Query: 123 AAAEAAEAFRPQ------------DDELTPAVV----EEEGFYLDEEVEFGMPGLLTDMA 182
           AAAEAA AF+ +            ++ L  A+      E  FY+ +E  F MP LL +MA
Sbjct: 127 AAAEAALAFQDEMCDATTDHGFDMEETLVEAIYTAEQSENAFYMHDEAMFEMPSLLANMA 186

Query: 183 EAMLLPPPNCVGNYDNDHFGANSMDFDADMSLWSY 199
           E MLLP P+   N++++  G      D D+SLWSY
Sbjct: 187 EGMLLPLPSVQWNHNHEVDGD-----DDDVSLWSY 216

[Close]

BLAST of CsaV3_5G005890 vs. Swiss-Prot
Match: sp|Q9SYS6|DRE1C_ARATH (Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=DREB1C PE=2 SV=2)

HSP 1 Score: 210.3 bits (534), Expect = 2.0e-53
Identity = 123/216 (56.94%), Postives = 145/216 (67.13%), Query Frame = 0


Query: 3   FSDASSSSHRSTLS---DDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEV 62
           FS+   S + S +S   D    LA+  PKK AGRKKF+ETRHPIYRGVR RNSGKWVCE+
Sbjct: 7   FSEMFGSDYESPVSSGGDYSPKLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCEL 66

Query: 63  REPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQR 122
           REPNKKTRIWLGTF TAEMAARAHDVAAIALRGRSACLNFADSA  L IP S   K+IQ+
Sbjct: 67  REPNKKTRIWLGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLRIPESTCAKEIQK 126

Query: 123 AAAEAAEAFRPQ-------------DDELTPAVV----EEEGFYLDEEVEFGMPGLLTDM 182
           AAAEAA  F+ +             ++ L  A+      ++ FY+DEE   GM  LL +M
Sbjct: 127 AAAEAALNFQDEMCHMTTDAHGLDMEETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNM 186

Query: 183 AEAMLLPPPNCVGNYDNDHFGANSMDFDADMSLWSY 199
           AE MLLP P+   NY+ D      ++ D D+SLWSY
Sbjct: 187 AEGMLLPSPSVQWNYNFD------VEGDDDVSLWSY 216

[Close]

BLAST of CsaV3_5G005890 vs. Swiss-Prot
Match: sp|Q9SGJ6|DRE1E_ARATH (Dehydration-responsive element-binding protein 1E OS=Arabidopsis thaliana OX=3702 GN=DREB1E PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 9.9e-45
Identity = 95/184 (51.63%), Postives = 126/184 (68.48%), Query Frame = 0


Query: 15  LSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVREPNKKTRIWLGTFP 74
           + +D++ +A   PKKRAGR+ FKETRHPIYRGVR R+  KWVCEVREP  + R+WLGT+P
Sbjct: 1   MENDDITVAEMKPKKRAGRRIFKETRHPIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYP 60

Query: 75  TAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRAAAEAAEAFRPQDDE 134
           TA+MAARAHDVA +ALRGRSACLNF+DSA  L +PAS DP  I+R AAEAAE FRP +  
Sbjct: 61  TADMAARAHDVAVLALRGRSACLNFSDSAWRLPVPASTDPDTIRRTAAEAAEMFRPPEFS 120

Query: 135 LTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNCVGNYDNDHFGANSMDFDADMS 194
               V+     +  +  + G+ G++  +AE  L+ PP    + +   +    M ++ D+S
Sbjct: 121 TGITVLPSASEF--DTSDEGVAGMMMRLAEEPLMSPPRSYIDMNTSVYVDEEMCYE-DLS 180

Query: 195 LWSY 199
           LWSY
Sbjct: 181 LWSY 181

[Close]

BLAST of CsaV3_5G005890 vs. TrEMBL
Match: tr|A0A0A0KRU7|A0A0A0KRU7_CUCSA (AP2/ERF domain-containing transcription factor OS=Cucumis sativus OX=3659 GN=Csa_5G174570 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 9.4e-109
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MDFSDASSSSHRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVR 60
           MDFSDASSSSHRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVR
Sbjct: 1   MDFSDASSSSHRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVR 60

Query: 61  EPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRA 120
           EPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRA
Sbjct: 61  EPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRA 120

Query: 121 AAEAAEAFRPQDDELTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNCVGNYDND 180
           AAEAAEAFRPQDDELTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNCVGNYDND
Sbjct: 121 AAEAAEAFRPQDDELTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNCVGNYDND 180

Query: 181 HFGANSMDFDADMSLWSYSI 201
           HFGANSMDFDADMSLWSYSI
Sbjct: 181 HFGANSMDFDADMSLWSYSI 200

[Close]

BLAST of CsaV3_5G005890 vs. TrEMBL
Match: tr|A0A1S3CT03|A0A1S3CT03_CUCME (dehydration-responsive element-binding protein 1D-like OS=Cucumis melo OX=3656 GN=LOC103504619 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 2.9e-102
Identity = 194/202 (96.04%), Postives = 195/202 (96.53%), Query Frame = 0


Query: 1   MDFSDASSSSHRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVR 60
           M+ SDASSSSHRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVR
Sbjct: 1   MELSDASSSSHRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVR 60

Query: 61  EPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRA 120
           EPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRA
Sbjct: 61  EPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRA 120

Query: 121 AAEAAEAFRPQDDE--LTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNCVGNYD 180
           AAEAAEAFRP DD   L PAVV EEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNCVGNYD
Sbjct: 121 AAEAAEAFRPPDDHEYLRPAVV-EEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNCVGNYD 180

Query: 181 NDHFGANSMDFDADMSLWSYSI 201
           NDHFGANSMDFDADMSLWSYSI
Sbjct: 181 NDHFGANSMDFDADMSLWSYSI 201

[Close]

BLAST of CsaV3_5G005890 vs. TrEMBL
Match: tr|A0A2I4FGE6|A0A2I4FGE6_9ROSI (dehydration-responsive element-binding protein 1D OS=Juglans regia OX=51240 GN=LOC108998585 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 6.2e-68
Identity = 148/212 (69.81%), Postives = 161/212 (75.94%), Query Frame = 0


Query: 2   DFSDASSSSHRS-----TLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWV 61
           DF   S  S  S      LSD+E+LLASR PKKRAGRKKFKETRHP+YRGVR RNSGKWV
Sbjct: 3   DFFQYSPDSEGSCGRVVNLSDEEVLLASRNPKKRAGRKKFKETRHPVYRGVRRRNSGKWV 62

Query: 62  CEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKD 121
           CEVREPNKK+RIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSAS L  PAS + KD
Sbjct: 63  CEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASKLPRPASGEAKD 122

Query: 122 IQRAAAEAAEAFRPQD--DELTPAVVEEEG------FYLDEEVEFGMPGLLTDMAEAMLL 181
           IQR AAEAAEAFRP D  D  +  V E E       F++DEE  FGMPGLL +MAEAMLL
Sbjct: 123 IQRTAAEAAEAFRPADLMDTSSETVAENERQSSEGVFFMDEEAVFGMPGLLANMAEAMLL 182

Query: 182 PPPNCVGNYDNDHFGANSMDFDADMSLWSYSI 201
           PPP C G  D+   G + ++  ADMSLWSYSI
Sbjct: 183 PPPYCAG--DDAFSGGDDVEASADMSLWSYSI 212

[Close]

BLAST of CsaV3_5G005890 vs. TrEMBL
Match: tr|F1CE69|F1CE69_BETPL (CBF transcription factor 2 OS=Betula platyphylla OX=78630 PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 4.0e-67
Identity = 138/198 (69.70%), Postives = 158/198 (79.80%), Query Frame = 0


Query: 4   SDASSSSHRSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVREPN 63
           S+ S + H   LSD+E+ LASR PKKRAGRKKFKETRHP+YRGVR RNSGKWVCEVR+PN
Sbjct: 11  SEISGAMH---LSDEEIQLASRNPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVRQPN 70

Query: 64  KKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRAAAE 123
           K++RIWLGTFPTAEMAARAHDVAAIALRG SACLNFADSAS L +PAS   K+IQR AAE
Sbjct: 71  KQSRIWLGTFPTAEMAARAHDVAAIALRGNSACLNFADSASRLPVPASGTAKEIQRTAAE 130

Query: 124 AAEAFRPQDDELTPAVVEEEG-FYLDEEVEFGMPGLLTDMAEAMLLPPPNCVGNYDNDHF 183
           AAEAFRP + +        EG F++DEE  FGMPGLL +MAE MLLPPP C G  D+D +
Sbjct: 131 AAEAFRPTETKAVEERQPSEGVFFMDEEAVFGMPGLLVNMAEGMLLPPPYCAG--DDDGY 190

Query: 184 GANSMDFDADMSLWSYSI 201
           G + M+  AD+SLWSYSI
Sbjct: 191 GGDEMEAHADVSLWSYSI 203

[Close]

BLAST of CsaV3_5G005890 vs. TrEMBL
Match: tr|A0A2N9FUX0|A0A2N9FUX0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18855 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.2e-66
Identity = 145/214 (67.76%), Postives = 160/214 (74.77%), Query Frame = 0


Query: 15  LSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVCEVREPNKKTRIWLGTFP 74
           LSD+ELLLASR PKKRAGRKKFKETRHP+YRGVR RNSGKWVCEVREPNKK+RIWLGTFP
Sbjct: 4   LSDEELLLASRNPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFP 63

Query: 75  TAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDIQRAAAEAAEAFRPQD-- 134
           TA+MAARAHDVAAIALRGR+ACLNFADSA  L +PA+ + KDIQRAAAEAAEAFRP +  
Sbjct: 64  TADMAARAHDVAAIALRGRAACLNFADSAWRLPVPATAEAKDIQRAAAEAAEAFRPMESD 123

Query: 135 ----DELTP----AVVEEEG-----------------FYLDEEVEFGMPGLLTDMAEAML 194
               DEL P     V E E                  F++DEE  FGMPGLLT+MAE ML
Sbjct: 124 GVSGDELRPRRENTVAEVEXXXXXXXXXXXXXXXXXVFFMDEEAVFGMPGLLTNMAEGML 183

Query: 195 LPPPNCVGN-YDNDHFGANSMDFDADMSLWSYSI 201
           LPPP+CVGN +D D   A S     D+SLWSYSI
Sbjct: 184 LPPPHCVGNGFDGDDVEAGS-----DVSLWSYSI 212

The following BLAST results are available for this feature:

BLAST of CsaV3_5G005890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143704.1	1.4e-108	100.00	PREDICTED: dehydration-responsive element-binding protein 1B-like [Cucumis sativ...	[more]
XP_008467214.1	4.4e-102	96.04	PREDICTED: dehydration-responsive element-binding protein 1D-like [Cucumis melo]	[more]
XP_022995351.1	2.4e-71	74.40	dehydration-responsive element-binding protein 1E-like [Cucurbita maxima]	[more]
XP_022957955.1	4.0e-71	74.40	dehydration-responsive element-binding protein 1E-like [Cucurbita moschata] >XP_...	[more]
XP_018830708.1	9.3e-68	69.81	PREDICTED: dehydration-responsive element-binding protein 1D [Juglans regia]	[more]

BLAST of CsaV3_5G005890 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25490.1	2.0e-56	59.62	C-repeat/DRE binding factor 1	[more]
AT5G51990.1	2.6e-56	58.33	C-repeat-binding factor 4	[more]
AT4G25480.1	2.9e-55	58.14	dehydration response element B1A	[more]
AT4G25470.1	1.1e-54	56.94	C-repeat/DRE binding factor 2	[more]
AT1G63030.1	5.5e-46	51.63	Integrase-type DNA-binding superfamily protein	[more]

BLAST of CsaV3_5G005890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P93835\|DRE1B_ARATH	3.6e-55	59.62	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]
sp\|Q9FJ93\|DRE1D_ARATH	4.7e-55	58.33	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=370...	[more]
sp\|Q9M0L0\|DRE1A_ARATH	5.2e-54	58.14	Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=370...	[more]
sp\|Q9SYS6\|DRE1C_ARATH	2.0e-53	56.94	Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=370...	[more]
sp\|Q9SGJ6\|DRE1E_ARATH	9.9e-45	51.63	Dehydration-responsive element-binding protein 1E OS=Arabidopsis thaliana OX=370...	[more]

BLAST of CsaV3_5G005890 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KRU7\|A0A0A0KRU7_CUCSA	9.4e-109	100.00	AP2/ERF domain-containing transcription factor OS=Cucumis sativus OX=3659 GN=Csa...	[more]
tr\|A0A1S3CT03\|A0A1S3CT03_CUCME	2.9e-102	96.04	dehydration-responsive element-binding protein 1D-like OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A2I4FGE6\|A0A2I4FGE6_9ROSI	6.2e-68	69.81	dehydration-responsive element-binding protein 1D OS=Juglans regia OX=51240 GN=L...	[more]
tr\|F1CE69\|F1CE69_BETPL	4.0e-67	69.70	CBF transcription factor 2 OS=Betula platyphylla OX=78630 PE=2 SV=1	[more]
tr\|A0A2N9FUX0\|A0A2N9FUX0_FAGSY	1.2e-66	67.76	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18855 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR036955	AP2/ERF_dom_sf
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G005890.1	CsaV3_5G005890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 66..82 score: 71.02 coord: 44..55 score: 64.39
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 43..106 e-value: 1.9E-32 score: 123.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 42..92 e-value: 1.9E-13 score: 50.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 43..100 score: 21.918
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 42..102 e-value: 9.79648E-33 score: 113.135
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 43..101 e-value: 8.5E-27 score: 94.8
None	No IPR available	PANTHER	PTHR31839	FAMILY NOT NAMED	coord: 5..200
None	No IPR available	PANTHER	PTHR31839:SF8	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1A-RELATED	coord: 5..200
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 43..102

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G005890	CSPI05G08480	Wild cucumber (PI 183967)	cpicucB285
CsaV3_5G005890	Cucsa.166340	Cucumber (Gy14) v1	cgycucB264
CsaV3_5G005890	CmaCh02G010470	Cucurbita maxima (Rimu)	cmacucB0731
CsaV3_5G005890	CmoCh02G010610	Cucurbita moschata (Rifu)	cmocucB0719
CsaV3_5G005890	Cp4.1LG05g06700	Cucurbita pepo (Zucchini)	cpecucB0916
CsaV3_5G005890	CsGy5G005870	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G005890	Carg08431	Silver-seed gourd	carcucB0752
CsaV3_5G005890	Cla002330	Watermelon (97103) v1	cucwmB436
CsaV3_5G005890	MELO3C005367	Melon (DHL92) v3.5.1	cucmeB360
CsaV3_5G005890	ClCG01G005660	Watermelon (Charleston Gray)	cucwcgB385
CsaV3_5G005890	Lsi09G005960	Bottle gourd (USVL1VR-Ls)	cuclsiB345
CsaV3_5G005890	MELO3C005367.2	Melon (DHL92) v3.6.1	cucmedB352
CsaV3_5G005890	Cla97C01G005910	Watermelon (97103) v2	cucwmbB351
CsaV3_5G005890	Bhi12G000697	Wax gourd	cucwgoB456

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G005890	Cucumber (Chinese Long) v3	cuccucB122
CsaV3_5G005890	Silver-seed gourd	carcucB0776
CsaV3_5G005890	Cucurbita maxima (Rimu)	cmacucB0341
CsaV3_5G005890	Cucurbita moschata (Rifu)	cmocucB0336
CsaV3_5G005890	Cucurbita pepo (Zucchini)	cpecucB0224