Cp4.1LG05g06700 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG05g06700
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Dehydration-responsive element-binding factor 1
Location	Cp4.1LG05 : 4119634 .. 4120230 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTCCCGATGCTTCTTCTTCTTCTAATTCCGAATTCTTCACTTCCCGCCGATCAAATTTCTCCGACGAGGAGCTTCTCCTGGCATCCCGACACCCCAAGAAGAGGGCCGGAAGAAAGAAATTCAAGGAAACTCGCCACCCTGTTTACCGTGGTGTCCGCCGCCGCAATTCCGGCAAGTGGGTCTGCGAGGTCAGAGAGCCCAATAAAAAGACTAGGATTTGGCTCGGTACTTTCCCCACCGCCGAGATGGCTGCTCGGGCTCATGATGTAGCCGCCATCGCCCTCCGCGGTCGCTCTGCTTGTCTTAATTTCGCCGACTCTGTTTCCGCGCTTCCTCGCCCGGCTTCTCTTGATCCCAAGGATATTCAGAGGGCCGCGGCTGAGGCTGCAGAGGCCTTCCGCCCGCCGGAGACTGCCCCGGCGGAGGATATGTTTTGTTTCGATAACGATGAGATGCCCGGGTTTCTGGCGGACATGGCGGAGGCAATGCTGTTGCCGCCGCCCAATTGTGTGGCGACTGACCACGACGACTATGGGCCGAATTCCATGGATTTTGATGCCGACATGTCGTTGTGGAGTTACTCAATTTGA

mRNA sequence

ATGGATTTTCCCGATGCTTCTTCTTCTTCTAATTCCGAATTCTTCACTTCCCGCCGATCAAATTTCTCCGACGAGGAGCTTCTCCTGGCATCCCGACACCCCAAGAAGAGGGCCGGAAGAAAGAAATTCAAGGAAACTCGCCACCCTGTTTACCGTGGTGTCCGCCGCCGCAATTCCGGCAAGTGGGTCTGCGAGGTCAGAGAGCCCAATAAAAAGACTAGGATTTGGCTCGGTACTTTCCCCACCGCCGAGATGGCTGCTCGGGCTCATGATGTAGCCGCCATCGCCCTCCGCGGTCGCTCTGCTTGTCTTAATTTCGCCGACTCTGTTTCCGCGCTTCCTCGCCCGGCTTCTCTTGATCCCAAGGATATTCAGAGGGCCGCGGCTGAGGCTGCAGAGGCCTTCCGCCCGCCGGAGACTGCCCCGGCGGAGGATATGTTTTGTTTCGATAACGATGAGATGCCCGGGTTTCTGGCGGACATGGCGGAGGCAATGCTGTTGCCGCCGCCCAATTGTGTGGCGACTGACCACGACGACTATGGGCCGAATTCCATGGATTTTGATGCCGACATGTCGTTGTGGAGTTACTCAATTTGA

Coding sequence (CDS)

ATGGATTTTCCCGATGCTTCTTCTTCTTCTAATTCCGAATTCTTCACTTCCCGCCGATCAAATTTCTCCGACGAGGAGCTTCTCCTGGCATCCCGACACCCCAAGAAGAGGGCCGGAAGAAAGAAATTCAAGGAAACTCGCCACCCTGTTTACCGTGGTGTCCGCCGCCGCAATTCCGGCAAGTGGGTCTGCGAGGTCAGAGAGCCCAATAAAAAGACTAGGATTTGGCTCGGTACTTTCCCCACCGCCGAGATGGCTGCTCGGGCTCATGATGTAGCCGCCATCGCCCTCCGCGGTCGCTCTGCTTGTCTTAATTTCGCCGACTCTGTTTCCGCGCTTCCTCGCCCGGCTTCTCTTGATCCCAAGGATATTCAGAGGGCCGCGGCTGAGGCTGCAGAGGCCTTCCGCCCGCCGGAGACTGCCCCGGCGGAGGATATGTTTTGTTTCGATAACGATGAGATGCCCGGGTTTCTGGCGGACATGGCGGAGGCAATGCTGTTGCCGCCGCCCAATTGTGTGGCGACTGACCACGACGACTATGGGCCGAATTCCATGGATTTTGATGCCGACATGTCGTTGTGGAGTTACTCAATTTGA

Protein sequence

MDFPDASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPPETAPAEDMFCFDNDEMPGFLADMAEAMLLPPPNCVATDHDDYGPNSMDFDADMSLWSYSI

Homology

[Close]

BLAST of Cp4.1LG05g06700 vs. Swiss-Prot
Match: DRE1D_ARATH (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana GN=DREB1D PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.6e-47
Identity = 120/223 (53.81%), Postives = 144/223 (64.57%), Query Frame = 1


Query: 3   FPDASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKW 62
           FPD+  S +     S  S+ S+    LAS  PKKRAGRKKF+ETRHP+YRGVR+RNSGKW
Sbjct: 8   FPDSFLSISDH--RSPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKW 67

Query: 63  VCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPK 122
           VCEVREPNKK+RIWLGTFPT EMAARAHDVAA+ALRGRSACLNFADS   L  P +  PK
Sbjct: 68  VCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCPK 127

Query: 123 DIQRAAAEAAEAFRPPET-------APAED-------------------MFCFDNDE--- 182
           +IQ+AA+EAA AF+   T       A AE+                   +F  D++    
Sbjct: 128 EIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEALLG 187

Query: 183 MPGFLADMAEAMLLPPPNCVATDHDDYGPNSMDFDADMSLWSY 197
           MP F  +MAE MLLPPP  V  +H+D+     D   D+SLWS+
Sbjct: 188 MPNFFENMAEGMLLPPPE-VGWNHNDF-----DGVGDVSLWSF 222

[Close]

BLAST of Cp4.1LG05g06700 vs. Swiss-Prot
Match: DRE1B_ARATH (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DREB1B PE=2 SV=2)

HSP 1 Score: 183.3 bits (464), Expect = 2.5e-45
Identity = 114/193 (59.07%), Postives = 128/193 (66.32%), Query Frame = 1


Query: 29  LASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTAEMAAR 88
           LA+  PKK AGRKKF+ETRHP+YRGVR+RNSGKWV EVREPNKKTRIWLGTF TAEMAAR
Sbjct: 26  LATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAAR 85

Query: 89  AHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPP---------- 148
           AHDVAA+ALRGRSACLNFADS   L  P S   KDIQ+AAAEAA AF+            
Sbjct: 86  AHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHG 145

Query: 149 ----ET------APAEDMFCFDNDE-----MPGFLADMAEAMLLPPPNCVATDHDDYGPN 197
               ET       P +    F  DE     MP  L +MAE MLLPPP+ V  +H+  G  
Sbjct: 146 LDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPS-VQWNHNYDG-- 205

[Close]

BLAST of Cp4.1LG05g06700 vs. Swiss-Prot
Match: DRE1E_ARATH (Dehydration-responsive element-binding protein 1E OS=Arabidopsis thaliana GN=DREB1E PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 7.3e-45
Identity = 97/180 (53.89%), Postives = 125/180 (69.44%), Query Frame = 1


Query: 24  DEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTA 83
           ++++ +A   PKKRAGR+ FKETRHP+YRGVRRR+  KWVCEVREP  + R+WLGT+PTA
Sbjct: 3   NDDITVAEMKPKKRAGRRIFKETRHPIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTA 62

Query: 84  EMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPPE---- 143
           +MAARAHDVA +ALRGRSACLNF+DS   LP PAS DP  I+R AAEAAE FRPPE    
Sbjct: 63  DMAARAHDVAVLALRGRSACLNFSDSAWRLPVPASTDPDTIRRTAAEAAEMFRPPEFSTG 122

Query: 144 --TAPAEDMFCFDNDEMPGFLADMAEAMLLPPP-NCVATDHDDYGPNSMDFDADMSLWSY 197
               P+   F   ++ + G +  +AE  L+ PP + +  +   Y    M ++ D+SLWSY
Sbjct: 123 ITVLPSASEFDTSDEGVAGMMMRLAEEPLMSPPRSYIDMNTSVYVDEEMCYE-DLSLWSY 181

[Close]

BLAST of Cp4.1LG05g06700 vs. Swiss-Prot
Match: DRE1F_ARATH (Dehydration-responsive element-binding protein 1F OS=Arabidopsis thaliana GN=DREB1F PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.9e-41
Identity = 101/207 (48.79%), Postives = 123/207 (59.42%), Query Frame = 1


Query: 23  SDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPT 82
           ++++++LA   PKKRAGR+ FKETRHPVYRG+RRRN  KWVCEVREP  + RIWLGT+PT
Sbjct: 2   NNDDIILAEMRPKKRAGRRVFKETRHPVYRGIRRRNGDKWVCEVREPTHQRRIWLGTYPT 61

Query: 83  AEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPPETAP 142
           A+MAARAHDVA +ALRGRSACLNFADS   LP P S DP  I+R AAEAAE FRP +   
Sbjct: 62  ADMAARAHDVAVLALRGRSACLNFADSAWRLPVPESNDPDVIRRVAAEAAEMFRPVDLES 121

Query: 143 AEDMF-CFDNDEMPGF-----------------------------LADMAEAMLLPPPNC 197
              +  C  +D   GF                             +  +AE  L+ PP  
Sbjct: 122 GITVLPCAGDDVDLGFGSGSGSGSGSEERNSSSYGFGDYEEVSTTMMRLAEGPLMSPPRS 181

[Close]

BLAST of Cp4.1LG05g06700 vs. Swiss-Prot
Match: DRE1A_ARATH (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana GN=DREB1A PE=1 SV=2)

HSP 1 Score: 168.3 bits (425), Expect = 8.4e-41
Identity = 102/151 (67.55%), Postives = 110/151 (72.85%), Query Frame = 1


Query: 7   SSSSNSEFF----TSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKW 66
           S S+ SE F     S  S+  D    LAS  PKK AGRKKF+ETRHP+YRGVRRRNSGKW
Sbjct: 3   SFSAFSEMFGSDYESSVSSGGDYIPTLASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKW 62

Query: 67  VCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPK 126
           VCEVREPNKKTRIWLGTF TAEMAARAHDVAA+ALRGRSACLNFADS   L  P S   K
Sbjct: 63  VCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAK 122

Query: 127 DIQRAAAEAAEAFRPPETAPAEDMFCFDNDE 154
           DIQ+AAAEAA AF+  E   A     FD +E
Sbjct: 123 DIQKAAAEAALAFQ-DEMCDATTDHGFDMEE 152

[Close]

BLAST of Cp4.1LG05g06700 vs. TrEMBL
Match: A0A0A0KRU7_CUCSA (AP2/ERF domain-containing transcription factor OS=Cucumis sativus GN=Csa_5G174570 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 3.6e-75
Identity = 160/207 (77.29%), Postives = 169/207 (81.64%), Query Frame = 1


Query: 1   MDFPDASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSG 60
           MDF DASSSS+       RS  SD+ELLLASR+PKKRAGRKKFKETRHP+YRGVR RNSG
Sbjct: 1   MDFSDASSSSH-------RSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSG 60

Query: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLD 120
           KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADS S L  PAS+D
Sbjct: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVD 120

Query: 121 PKDIQRAAAEAAEAFRP--PETAPA---EDMFCFDND---EMPGFLADMAEAMLLPPPNC 180
           PKDIQRAAAEAAEAFRP   E  PA   E+ F  D +    MPG L DMAEAMLLPPPNC
Sbjct: 121 PKDIQRAAAEAAEAFRPQDDELTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNC 180

Query: 181 VAT-DHDDYGPNSMDFDADMSLWSYSI 199
           V   D+D +G NSMDFDADMSLWSYSI
Sbjct: 181 VGNYDNDHFGANSMDFDADMSLWSYSI 200

[Close]

BLAST of Cp4.1LG05g06700 vs. TrEMBL
Match: A0A067JQQ3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26161 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.4e-65
Identity = 140/201 (69.65%), Postives = 153/201 (76.12%), Query Frame = 1


Query: 19  RSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLG 78
           R+NFSDEEL+LAS +PKKRAGRKKF+ETRHPVYRGVRRRNSGKWVCEVREPNKK+RIWLG
Sbjct: 29  RTNFSDEELMLASSYPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLG 88

Query: 79  TFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRP- 138
           TFPTAEMAARAHDVAA+ALRGRSACLNFADS   LP PAS DPKDIQ+AAAEAA AFRP 
Sbjct: 89  TFPTAEMAARAHDVAALALRGRSACLNFADSSWRLPVPASSDPKDIQKAAAEAARAFRPV 148

Query: 139 -----------------PETAPAEDMFCFDNDE---MPGFLADMAEAMLLPPPNCVATDH 198
                             ETA AE MF  D +    MPG LA+MAE MLLPPP CVA + 
Sbjct: 149 EADGLLGDEFRQENKRATETAEAEGMFYMDEEAVFGMPGLLANMAEGMLLPPPQCVAENG 208

[Close]

BLAST of Cp4.1LG05g06700 vs. TrEMBL
Match: F1CE69_BETPL (CBF transcription factor 2 OS=Betula platyphylla PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.4e-64
Identity = 135/187 (72.19%), Postives = 149/187 (79.68%), Query Frame = 1


Query: 21  NFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTF 80
           + SDEE+ LASR+PKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVR+PNK++RIWLGTF
Sbjct: 18  HLSDEEIQLASRNPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVRQPNKQSRIWLGTF 77

Query: 81  PTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPPET 140
           PTAEMAARAHDVAAIALRG SACLNFADS S LP PAS   K+IQR AAEAAEAFRP ET
Sbjct: 78  PTAEMAARAHDVAAIALRGNSACLNFADSASRLPVPASGTAKEIQRTAAEAAEAFRPTET 137

Query: 141 ------APAEDMFCFDNDE---MPGFLADMAEAMLLPPPNCVATDHDDYGPNSMDFDADM 199
                  P+E +F  D +    MPG L +MAE MLLPPP C A D D YG + M+  AD+
Sbjct: 138 KAVEERQPSEGVFFMDEEAVFGMPGLLVNMAEGMLLPPPYC-AGDDDGYGGDEMEAHADV 197

[Close]

BLAST of Cp4.1LG05g06700 vs. TrEMBL
Match: J7K128_MORAL (CRT/DRE binding factor 1 OS=Morus alba var. multicaulis PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 5.4e-63
Identity = 138/210 (65.71%), Postives = 155/210 (73.81%), Query Frame = 1


Query: 5   DASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVC 64
           +AS S +      RR NFSDEE++LAS  PKKRAGRKKFKETRHPVYRGVRRRNSGKWVC
Sbjct: 23  EASDSMSPSDSGGRRMNFSDEEVVLASSCPKKRAGRKKFKETRHPVYRGVRRRNSGKWVC 82

Query: 65  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDI 124
           EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRS CLNFADS   LP PAS DPKDI
Sbjct: 83  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSTCLNFADSAWRLPVPASPDPKDI 142

Query: 125 QRAAAEAAEAFRPPE--------------TAPAEDMFCFDNDE---MPGFLADMAEAMLL 184
           Q+AA+EAAEAFRP +               A +ED+F  D +    MPG L +MAE MLL
Sbjct: 143 QKAASEAAEAFRPVDMAEDTGEKPAADAAVAESEDVFFMDEEAVFGMPGLLTNMAEGMLL 202

Query: 185 PPPNCVATDHDDYGPNSMDFDADMSLWSYS 198
           PPP+C+     DY  +  +  A++SLWSYS
Sbjct: 203 PPPHCM---EHDYSSDDAEAYANVSLWSYS 229

[Close]

BLAST of Cp4.1LG05g06700 vs. TrEMBL
Match: A9PL44_POPTR (C-repeat binding facor 2 OS=Populus trichocarpa GN=CBF2 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-62
Identity = 132/197 (67.01%), Postives = 148/197 (75.13%), Query Frame = 1


Query: 22  FSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFP 81
           FSDEE++LASR+PKKRAGRKKF+ETRHPVYRGVRRRNSGKWVCEVREPNKK+RIWLGTFP
Sbjct: 52  FSDEEVILASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFP 111

Query: 82  TAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPPETA 141
           TA+MAARAHDVAA+ALRGRSACLNFADS   LP PAS D KDIQ+AAAEAAEAFRP  + 
Sbjct: 112 TADMAARAHDVAALALRGRSACLNFADSAWRLPTPASSDAKDIQKAAAEAAEAFRPEGSL 171

Query: 142 PAE-----------------DMFCFDNDE---MPGFLADMAEAMLLPPPNCVATDHDDYG 199
             E                 D+F  D+D    MPG LA++AE MLLPPPNC      D  
Sbjct: 172 GVELTRTGDEVEKVAGTAAGDVFYMDDDADFGMPGLLANIAEGMLLPPPNCCGYSGGDSL 231

[Close]

BLAST of Cp4.1LG05g06700 vs. TAIR10
Match: AT5G51990.1 (AT5G51990.1 C-repeat-binding factor 4)

HSP 1 Score: 190.7 bits (483), Expect = 8.9e-49
Identity = 120/223 (53.81%), Postives = 144/223 (64.57%), Query Frame = 1


Query: 3   FPDASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKW 62
           FPD+  S +     S  S+ S+    LAS  PKKRAGRKKF+ETRHP+YRGVR+RNSGKW
Sbjct: 8   FPDSFLSISDH--RSPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKW 67

Query: 63  VCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPK 122
           VCEVREPNKK+RIWLGTFPT EMAARAHDVAA+ALRGRSACLNFADS   L  P +  PK
Sbjct: 68  VCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCPK 127

Query: 123 DIQRAAAEAAEAFRPPET-------APAED-------------------MFCFDNDE--- 182
           +IQ+AA+EAA AF+   T       A AE+                   +F  D++    
Sbjct: 128 EIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEALLG 187

Query: 183 MPGFLADMAEAMLLPPPNCVATDHDDYGPNSMDFDADMSLWSY 197
           MP F  +MAE MLLPPP  V  +H+D+     D   D+SLWS+
Sbjct: 188 MPNFFENMAEGMLLPPPE-VGWNHNDF-----DGVGDVSLWSF 222

[Close]

BLAST of Cp4.1LG05g06700 vs. TAIR10
Match: AT4G25490.1 (AT4G25490.1 C-repeat/DRE binding factor 1)

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-46
Identity = 114/193 (59.07%), Postives = 128/193 (66.32%), Query Frame = 1


Query: 29  LASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTAEMAAR 88
           LA+  PKK AGRKKF+ETRHP+YRGVR+RNSGKWV EVREPNKKTRIWLGTF TAEMAAR
Sbjct: 26  LATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAAR 85

Query: 89  AHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPP---------- 148
           AHDVAA+ALRGRSACLNFADS   L  P S   KDIQ+AAAEAA AF+            
Sbjct: 86  AHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHG 145

Query: 149 ----ET------APAEDMFCFDNDE-----MPGFLADMAEAMLLPPPNCVATDHDDYGPN 197
               ET       P +    F  DE     MP  L +MAE MLLPPP+ V  +H+  G  
Sbjct: 146 LDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPS-VQWNHNYDG-- 205

[Close]

BLAST of Cp4.1LG05g06700 vs. TAIR10
Match: AT1G63030.1 (AT1G63030.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 181.8 bits (460), Expect = 4.1e-46
Identity = 97/180 (53.89%), Postives = 125/180 (69.44%), Query Frame = 1


Query: 24  DEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTA 83
           ++++ +A   PKKRAGR+ FKETRHP+YRGVRRR+  KWVCEVREP  + R+WLGT+PTA
Sbjct: 3   NDDITVAEMKPKKRAGRRIFKETRHPIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTA 62

Query: 84  EMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPPE---- 143
           +MAARAHDVA +ALRGRSACLNF+DS   LP PAS DP  I+R AAEAAE FRPPE    
Sbjct: 63  DMAARAHDVAVLALRGRSACLNFSDSAWRLPVPASTDPDTIRRTAAEAAEMFRPPEFSTG 122

Query: 144 --TAPAEDMFCFDNDEMPGFLADMAEAMLLPPP-NCVATDHDDYGPNSMDFDADMSLWSY 197
               P+   F   ++ + G +  +AE  L+ PP + +  +   Y    M ++ D+SLWSY
Sbjct: 123 ITVLPSASEFDTSDEGVAGMMMRLAEEPLMSPPRSYIDMNTSVYVDEEMCYE-DLSLWSY 181

[Close]

BLAST of Cp4.1LG05g06700 vs. TAIR10
Match: AT1G12610.1 (AT1G12610.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 169.9 bits (429), Expect = 1.6e-42
Identity = 101/207 (48.79%), Postives = 123/207 (59.42%), Query Frame = 1


Query: 23  SDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPT 82
           ++++++LA   PKKRAGR+ FKETRHPVYRG+RRRN  KWVCEVREP  + RIWLGT+PT
Sbjct: 2   NNDDIILAEMRPKKRAGRRVFKETRHPVYRGIRRRNGDKWVCEVREPTHQRRIWLGTYPT 61

Query: 83  AEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPPETAP 142
           A+MAARAHDVA +ALRGRSACLNFADS   LP P S DP  I+R AAEAAE FRP +   
Sbjct: 62  ADMAARAHDVAVLALRGRSACLNFADSAWRLPVPESNDPDVIRRVAAEAAEMFRPVDLES 121

Query: 143 AEDMF-CFDNDEMPGF-----------------------------LADMAEAMLLPPPNC 197
              +  C  +D   GF                             +  +AE  L+ PP  
Sbjct: 122 GITVLPCAGDDVDLGFGSGSGSGSGSEERNSSSYGFGDYEEVSTTMMRLAEGPLMSPPRS 181

[Close]

BLAST of Cp4.1LG05g06700 vs. TAIR10
Match: AT4G25480.1 (AT4G25480.1 dehydration response element B1A)

HSP 1 Score: 168.3 bits (425), Expect = 4.7e-42
Identity = 102/151 (67.55%), Postives = 110/151 (72.85%), Query Frame = 1


Query: 7   SSSSNSEFF----TSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKW 66
           S S+ SE F     S  S+  D    LAS  PKK AGRKKF+ETRHP+YRGVRRRNSGKW
Sbjct: 3   SFSAFSEMFGSDYESSVSSGGDYIPTLASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKW 62

Query: 67  VCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPK 126
           VCEVREPNKKTRIWLGTF TAEMAARAHDVAA+ALRGRSACLNFADS   L  P S   K
Sbjct: 63  VCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAK 122

Query: 127 DIQRAAAEAAEAFRPPETAPAEDMFCFDNDE 154
           DIQ+AAAEAA AF+  E   A     FD +E
Sbjct: 123 DIQKAAAEAALAFQ-DEMCDATTDHGFDMEE 152

[Close]

BLAST of Cp4.1LG05g06700 vs. NCBI nr
Match: gi|449451912|ref|XP_004143704.1| (PREDICTED: dehydration-responsive element-binding protein 1B-like [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 5.2e-75
Identity = 160/207 (77.29%), Postives = 169/207 (81.64%), Query Frame = 1


Query: 1   MDFPDASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSG 60
           MDF DASSSS+       RS  SD+ELLLASR+PKKRAGRKKFKETRHP+YRGVR RNSG
Sbjct: 1   MDFSDASSSSH-------RSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSG 60

Query: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLD 120
           KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADS S L  PAS+D
Sbjct: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVD 120

Query: 121 PKDIQRAAAEAAEAFRP--PETAPA---EDMFCFDND---EMPGFLADMAEAMLLPPPNC 180
           PKDIQRAAAEAAEAFRP   E  PA   E+ F  D +    MPG L DMAEAMLLPPPNC
Sbjct: 121 PKDIQRAAAEAAEAFRPQDDELTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNC 180

Query: 181 VAT-DHDDYGPNSMDFDADMSLWSYSI 199
           V   D+D +G NSMDFDADMSLWSYSI
Sbjct: 181 VGNYDNDHFGANSMDFDADMSLWSYSI 200

[Close]

BLAST of Cp4.1LG05g06700 vs. NCBI nr
Match: gi|659073013|ref|XP_008467214.1| (PREDICTED: dehydration-responsive element-binding protein 1D-like [Cucumis melo])

HSP 1 Score: 287.7 bits (735), Expect = 1.5e-74
Identity = 157/208 (75.48%), Postives = 168/208 (80.77%), Query Frame = 1


Query: 1   MDFPDASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSG 60
           M+  DASSSS+       RS  SD+ELLLASR+PKKRAGRKKFKETRHP+YRGVR RNSG
Sbjct: 1   MELSDASSSSH-------RSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSG 60

Query: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLD 120
           KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADS S L  PAS+D
Sbjct: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVD 120

Query: 121 PKDIQRAAAEAAEAFRPPE------TAPAEDMFCFDND---EMPGFLADMAEAMLLPPPN 180
           PKDIQRAAAEAAEAFRPP+       A  E+ F  D +    MPG L DMAEAMLLPPPN
Sbjct: 121 PKDIQRAAAEAAEAFRPPDDHEYLRPAVVEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPN 180

Query: 181 CVAT-DHDDYGPNSMDFDADMSLWSYSI 199
           CV   D+D +G NSMDFDADMSLWSYSI
Sbjct: 181 CVGNYDNDHFGANSMDFDADMSLWSYSI 201

[Close]

BLAST of Cp4.1LG05g06700 vs. NCBI nr
Match: gi|802769328|ref|XP_012090326.1| (PREDICTED: dehydration-responsive element-binding protein 1A [Jatropha curcas])

HSP 1 Score: 255.8 bits (652), Expect = 6.4e-65
Identity = 140/201 (69.65%), Postives = 153/201 (76.12%), Query Frame = 1


Query: 19  RSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLG 78
           R+NFSDEEL+LAS +PKKRAGRKKF+ETRHPVYRGVRRRNSGKWVCEVREPNKK+RIWLG
Sbjct: 29  RTNFSDEELMLASSYPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLG 88

Query: 79  TFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRP- 138
           TFPTAEMAARAHDVAA+ALRGRSACLNFADS   LP PAS DPKDIQ+AAAEAA AFRP 
Sbjct: 89  TFPTAEMAARAHDVAALALRGRSACLNFADSSWRLPVPASSDPKDIQKAAAEAARAFRPV 148

Query: 139 -----------------PETAPAEDMFCFDNDE---MPGFLADMAEAMLLPPPNCVATDH 198
                             ETA AE MF  D +    MPG LA+MAE MLLPPP CVA + 
Sbjct: 149 EADGLLGDEFRQENKRATETAEAEGMFYMDEEAVFGMPGLLANMAEGMLLPPPQCVAENG 208

[Close]

BLAST of Cp4.1LG05g06700 vs. NCBI nr
Match: gi|325512539|gb|ADZ23480.1| (CBF transcription factor 2 [Betula platyphylla])

HSP 1 Score: 251.9 bits (642), Expect = 9.2e-64
Identity = 135/187 (72.19%), Postives = 149/187 (79.68%), Query Frame = 1


Query: 21  NFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTF 80
           + SDEE+ LASR+PKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVR+PNK++RIWLGTF
Sbjct: 18  HLSDEEIQLASRNPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVRQPNKQSRIWLGTF 77

Query: 81  PTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPPET 140
           PTAEMAARAHDVAAIALRG SACLNFADS S LP PAS   K+IQR AAEAAEAFRP ET
Sbjct: 78  PTAEMAARAHDVAAIALRGNSACLNFADSASRLPVPASGTAKEIQRTAAEAAEAFRPTET 137

Query: 141 ------APAEDMFCFDNDE---MPGFLADMAEAMLLPPPNCVATDHDDYGPNSMDFDADM 199
                  P+E +F  D +    MPG L +MAE MLLPPP C A D D YG + M+  AD+
Sbjct: 138 KAVEERQPSEGVFFMDEEAVFGMPGLLVNMAEGMLLPPPYC-AGDDDGYGGDEMEAHADV 197

[Close]

BLAST of Cp4.1LG05g06700 vs. NCBI nr
Match: gi|1009157256|ref|XP_015896668.1| (PREDICTED: dehydration-responsive element-binding protein 1A-like [Ziziphus jujuba])

HSP 1 Score: 251.1 bits (640), Expect = 1.6e-63
Identity = 139/211 (65.88%), Postives = 157/211 (74.41%), Query Frame = 1


Query: 4   PDASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWV 63
           P     S+S+  ++RR N SDEE+LLAS +PK+RAGRKKFKETRHPVYRGVRR N+GKWV
Sbjct: 15  PPEVGESSSDSGSARRLNLSDEEVLLASSNPKRRAGRKKFKETRHPVYRGVRRTNTGKWV 74

Query: 64  CEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKD 123
           CEVREPNKKTRIWLGTFPTAEMAARAHDVAA+ALRGRSACLNFADSV  LP PAS + KD
Sbjct: 75  CEVREPNKKTRIWLGTFPTAEMAARAHDVAAMALRGRSACLNFADSVWRLPMPASKEAKD 134

Query: 124 IQRAAAEAAEAFRPPE------------TAPAEDMFCFDNDE------MPGFLADMAEAM 183
           IQ+AAAEAAEAFRP E               +E+ F  + +E      MPG LADMAE M
Sbjct: 135 IQKAAAEAAEAFRPAELEKKGSKVSESAAVGSENSFYMEEEEAMSGLGMPGLLADMAEGM 194

Query: 184 LLPPPNCVATDHDDYGPNSMDFDADMSLWSY 197
           LLPPP CV    + Y  N M+ DAD+SLWSY
Sbjct: 195 LLPPPYCV---ENGYIENDMEEDADVSLWSY 222

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g06700 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DRE1D_ARATH	1.6e-47	53.81	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana GN=DRE...	[more]
DRE1B_ARATH	2.5e-45	59.07	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DRE...	[more]
DRE1E_ARATH	7.3e-45	53.89	Dehydration-responsive element-binding protein 1E OS=Arabidopsis thaliana GN=DRE...	[more]
DRE1F_ARATH	2.9e-41	48.79	Dehydration-responsive element-binding protein 1F OS=Arabidopsis thaliana GN=DRE...	[more]
DRE1A_ARATH	8.4e-41	67.55	Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana GN=DRE...	[more]

BLAST of Cp4.1LG05g06700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRU7_CUCSA	3.6e-75	77.29	AP2/ERF domain-containing transcription factor OS=Cucumis sativus GN=Csa_5G17457...	[more]
A0A067JQQ3_JATCU	4.4e-65	69.65	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26161 PE=4 SV=1	[more]
F1CE69_BETPL	6.4e-64	72.19	CBF transcription factor 2 OS=Betula platyphylla PE=2 SV=1	[more]
J7K128_MORAL	5.4e-63	65.71	CRT/DRE binding factor 1 OS=Morus alba var. multicaulis PE=2 SV=1	[more]
A9PL44_POPTR	1.6e-62	67.01	C-repeat binding facor 2 OS=Populus trichocarpa GN=CBF2 PE=4 SV=1	[more]

BLAST of Cp4.1LG05g06700 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G51990.1	8.9e-49	53.81	C-repeat-binding factor 4	[more]
AT4G25490.1	1.4e-46	59.07	C-repeat/DRE binding factor 1	[more]
AT1G63030.1	4.1e-46	53.89	Integrase-type DNA-binding superfamily protein	[more]
AT1G12610.1	1.6e-42	48.79	Integrase-type DNA-binding superfamily protein	[more]
AT4G25480.1	4.7e-42	67.55	dehydration response element B1A	[more]

BLAST of Cp4.1LG05g06700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451912\|ref\|XP_004143704.1\|	5.2e-75	77.29	PREDICTED: dehydration-responsive element-binding protein 1B-like [Cucumis sativ...	[more]
gi\|659073013\|ref\|XP_008467214.1\|	1.5e-74	75.48	PREDICTED: dehydration-responsive element-binding protein 1D-like [Cucumis melo]	[more]
gi\|802769328\|ref\|XP_012090326.1\|	6.4e-65	69.65	PREDICTED: dehydration-responsive element-binding protein 1A [Jatropha curcas]	[more]
gi\|325512539\|gb\|ADZ23480.1\|	9.2e-64	72.19	CBF transcription factor 2 [Betula platyphylla]	[more]
gi\|1009157256\|ref\|XP_015896668.1\|	1.6e-63	65.88	PREDICTED: dehydration-responsive element-binding protein 1A-like [Ziziphus juju...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g06700.1	Cp4.1LG05g06700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 73..89 score: 1.9E-9coord: 51..62 score: 1.
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 50..109 score: 9.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 49..99 score: 1.4
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 50..113 score: 6.5
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 50..107 score: 22
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 50..109 score: 5.17
None	No IPR available	PANTHER	PTHR31839	FAMILY NOT NAMED	coord: 6..198 score: 4.1E
None	No IPR available	PANTHER	PTHR31839:SF8	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1A-RELATED	coord: 6..198 score: 4.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG05g06700	Cucsa.166340	Cucumber (Gy14) v1	cgycpeB0459
Cp4.1LG05g06700	Cucsa.251030	Cucumber (Gy14) v1	cgycpeB0684
Cp4.1LG05g06700	CmaCh02G010470	Cucurbita maxima (Rimu)	cmacpeB646
Cp4.1LG05g06700	CmoCh02G010610	Cucurbita moschata (Rifu)	cmocpeB595
Cp4.1LG05g06700	Cla002330	Watermelon (97103) v1	cpewmB718
Cp4.1LG05g06700	Csa5G174570	Cucumber (Chinese Long) v2	cpecuB737
Cp4.1LG05g06700	MELO3C005367	Melon (DHL92) v3.5.1	cpemeB648
Cp4.1LG05g06700	ClCG01G005660	Watermelon (Charleston Gray)	cpewcgB640
Cp4.1LG05g06700	CSPI05G08480	Wild cucumber (PI 183967)	cpecpiB739
Cp4.1LG05g06700	Lsi09G005960	Bottle gourd (USVL1VR-Ls)	cpelsiB583
Cp4.1LG05g06700	MELO3C005367.2	Melon (DHL92) v3.6.1	cpemedB775
Cp4.1LG05g06700	CsaV3_5G005890	Cucumber (Chinese Long) v3	cpecucB0916
Cp4.1LG05g06700	CsGy5G005870	Cucumber (Gy14) v2	cgybcpeB692
Cp4.1LG05g06700	Carg08431	Silver-seed gourd	carcpeB1002

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG05g06700	Cucumber (Chinese Long) v3	cpecucB0903
Cp4.1LG05g06700	Wax gourd	cpewgoB0925
Cp4.1LG05g06700	Cucurbita pepo (Zucchini)	cpecpeB057
Cp4.1LG05g06700	Cucurbita pepo (Zucchini)	cpecpeB245
Cp4.1LG05g06700	Cucurbita maxima (Rimu)	cmacpeB358
Cp4.1LG05g06700	Cucurbita maxima (Rimu)	cmacpeB453
Cp4.1LG05g06700	Cucurbita moschata (Rifu)	cmocpeB322
Cp4.1LG05g06700	Cucurbita moschata (Rifu)	cmocpeB414
Cp4.1LG05g06700	Wild cucumber (PI 183967)	cpecpiB725
Cp4.1LG05g06700	Cucumber (Chinese Long) v2	cpecuB725
Cp4.1LG05g06700	Watermelon (Charleston Gray)	cpewcgB678
Cp4.1LG05g06700	Watermelon (97103) v1	cpewmB705
Cp4.1LG05g06700	Melon (DHL92) v3.5.1	cpemeB701
Cp4.1LG05g06700	Melon (DHL92) v3.6.1	cpemedB835