CmaCh02G010470 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh02G010470
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Dehydration responsive element binding transcription factor
Location	Cma_Chr02 : 6235241 .. 6235837 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTCCCGATGCTTCTTCTTCTTCTAATTCCGAATTCTTCACTTCCCGCCGATCAAATTTCTCCGACGAGGAGCTTCTCCTGGCATCCCGACACCCCAAGAAGAGGGCCGGAAGAAAGAAATTCAAGGAAACTCGCCACCCTGTTTACCGTGGTGTCCGCCGCCGCAATTCCGGCAAGTGGGTCTGCGAGGTTAGAGAGCCCAATAAAAAGACTAGAATTTGGCTCGGTACATTCCCCACCGCCGAGATGGCTGCTCGGGCTCATGATGTAGCCGCCATCGCCCTCCGCGGTCGCTCTGCTTGTCTTAATTTTGCCGACTCTGTTTCCGCGCTTCCTCGCCCGGCCTCTCTTGATCCCAAGGATATTCAGAGGGCCGCGGCTGAGGCTGCAGAGGCCTTCCGCCCGCCGGAGACTGCACCGGCGGAGGATATGTTTTGTTTCGATAACGATGCGATGCCCGGGTTTCTGGCGGACATGGCGGAGGCAATGCTGCTGCCGCCGCCCAATTGTGTGGCGACTGACCACGACGACTATGGGCCGAATTCCATGGATTTTGATGCCGACATGTCGTTGTGGAGTTACTCAATTTGA

mRNA sequence

ATGGATTTTCCCGATGCTTCTTCTTCTTCTAATTCCGAATTCTTCACTTCCCGCCGATCAAATTTCTCCGACGAGGAGCTTCTCCTGGCATCCCGACACCCCAAGAAGAGGGCCGGAAGAAAGAAATTCAAGGAAACTCGCCACCCTGTTTACCGTGGTGTCCGCCGCCGCAATTCCGGCAAGTGGGTCTGCGAGGTTAGAGAGCCCAATAAAAAGACTAGAATTTGGCTCGGTACATTCCCCACCGCCGAGATGGCTGCTCGGGCTCATGATGTAGCCGCCATCGCCCTCCGCGGTCGCTCTGCTTGTCTTAATTTTGCCGACTCTGTTTCCGCGCTTCCTCGCCCGGCCTCTCTTGATCCCAAGGATATTCAGAGGGCCGCGGCTGAGGCTGCAGAGGCCTTCCGCCCGCCGGAGACTGCACCGGCGGAGGATATGTTTTGTTTCGATAACGATGCGATGCCCGGGTTTCTGGCGGACATGGCGGAGGCAATGCTGCTGCCGCCGCCCAATTGTGTGGCGACTGACCACGACGACTATGGGCCGAATTCCATGGATTTTGATGCCGACATGTCGTTGTGGAGTTACTCAATTTGA

Coding sequence (CDS)

ATGGATTTTCCCGATGCTTCTTCTTCTTCTAATTCCGAATTCTTCACTTCCCGCCGATCAAATTTCTCCGACGAGGAGCTTCTCCTGGCATCCCGACACCCCAAGAAGAGGGCCGGAAGAAAGAAATTCAAGGAAACTCGCCACCCTGTTTACCGTGGTGTCCGCCGCCGCAATTCCGGCAAGTGGGTCTGCGAGGTTAGAGAGCCCAATAAAAAGACTAGAATTTGGCTCGGTACATTCCCCACCGCCGAGATGGCTGCTCGGGCTCATGATGTAGCCGCCATCGCCCTCCGCGGTCGCTCTGCTTGTCTTAATTTTGCCGACTCTGTTTCCGCGCTTCCTCGCCCGGCCTCTCTTGATCCCAAGGATATTCAGAGGGCCGCGGCTGAGGCTGCAGAGGCCTTCCGCCCGCCGGAGACTGCACCGGCGGAGGATATGTTTTGTTTCGATAACGATGCGATGCCCGGGTTTCTGGCGGACATGGCGGAGGCAATGCTGCTGCCGCCGCCCAATTGTGTGGCGACTGACCACGACGACTATGGGCCGAATTCCATGGATTTTGATGCCGACATGTCGTTGTGGAGTTACTCAATTTGA

Protein sequence

MDFPDASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPPETAPAEDMFCFDNDAMPGFLADMAEAMLLPPPNCVATDHDDYGPNSMDFDADMSLWSYSI

Homology

[Close]

BLAST of CmaCh02G010470 vs. Swiss-Prot
Match: DRE1D_ARATH (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana GN=DREB1D PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.1e-48
Identity = 121/223 (54.26%), Postives = 145/223 (65.02%), Query Frame = 1


Query: 3   FPDASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKW 62
           FPD+  S +     S  S+ S+    LAS  PKKRAGRKKF+ETRHP+YRGVR+RNSGKW
Sbjct: 8   FPDSFLSISDH--RSPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKW 67

Query: 63  VCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPK 122
           VCEVREPNKK+RIWLGTFPT EMAARAHDVAA+ALRGRSACLNFADS   L  P +  PK
Sbjct: 68  VCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCPK 127

Query: 123 DIQRAAAEAAEAFRPPET-------APAED-------------------MFCFDNDA--- 182
           +IQ+AA+EAA AF+   T       A AE+                   +F  D++A   
Sbjct: 128 EIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEALLG 187

Query: 183 MPGFLADMAEAMLLPPPNCVATDHDDYGPNSMDFDADMSLWSY 197
           MP F  +MAE MLLPPP  V  +H+D+     D   D+SLWS+
Sbjct: 188 MPNFFENMAEGMLLPPPE-VGWNHNDF-----DGVGDVSLWSF 222

[Close]

BLAST of CmaCh02G010470 vs. Swiss-Prot
Match: DRE1B_ARATH (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DREB1B PE=2 SV=2)

HSP 1 Score: 183.0 bits (463), Expect = 3.3e-45
Identity = 113/193 (58.55%), Postives = 128/193 (66.32%), Query Frame = 1


Query: 29  LASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTAEMAAR 88
           LA+  PKK AGRKKF+ETRHP+YRGVR+RNSGKWV EVREPNKKTRIWLGTF TAEMAAR
Sbjct: 26  LATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAAR 85

Query: 89  AHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPP---------- 148
           AHDVAA+ALRGRSACLNFADS   L  P S   KDIQ+AAAEAA AF+            
Sbjct: 86  AHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHG 145

Query: 149 ----ETA--------PAEDMFCFDNDAM---PGFLADMAEAMLLPPPNCVATDHDDYGPN 197
               ET          +E  F  D + M   P  L +MAE MLLPPP+ V  +H+  G  
Sbjct: 146 LDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPS-VQWNHNYDG-- 205

[Close]

BLAST of CmaCh02G010470 vs. Swiss-Prot
Match: DRE1E_ARATH (Dehydration-responsive element-binding protein 1E OS=Arabidopsis thaliana GN=DREB1E PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.3e-45
Identity = 97/180 (53.89%), Postives = 125/180 (69.44%), Query Frame = 1


Query: 24  DEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTA 83
           ++++ +A   PKKRAGR+ FKETRHP+YRGVRRR+  KWVCEVREP  + R+WLGT+PTA
Sbjct: 3   NDDITVAEMKPKKRAGRRIFKETRHPIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTA 62

Query: 84  EMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPPE---- 143
           +MAARAHDVA +ALRGRSACLNF+DS   LP PAS DP  I+R AAEAAE FRPPE    
Sbjct: 63  DMAARAHDVAVLALRGRSACLNFSDSAWRLPVPASTDPDTIRRTAAEAAEMFRPPEFSTG 122

Query: 144 --TAPAEDMFCFDNDAMPGFLADMAEAMLLPPP-NCVATDHDDYGPNSMDFDADMSLWSY 197
               P+   F   ++ + G +  +AE  L+ PP + +  +   Y    M ++ D+SLWSY
Sbjct: 123 ITVLPSASEFDTSDEGVAGMMMRLAEEPLMSPPRSYIDMNTSVYVDEEMCYE-DLSLWSY 181

[Close]

BLAST of CmaCh02G010470 vs. Swiss-Prot
Match: DRE1F_ARATH (Dehydration-responsive element-binding protein 1F OS=Arabidopsis thaliana GN=DREB1F PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.7e-41
Identity = 101/207 (48.79%), Postives = 123/207 (59.42%), Query Frame = 1


Query: 23  SDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPT 82
           ++++++LA   PKKRAGR+ FKETRHPVYRG+RRRN  KWVCEVREP  + RIWLGT+PT
Sbjct: 2   NNDDIILAEMRPKKRAGRRVFKETRHPVYRGIRRRNGDKWVCEVREPTHQRRIWLGTYPT 61

Query: 83  AEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPPETAP 142
           A+MAARAHDVA +ALRGRSACLNFADS   LP P S DP  I+R AAEAAE FRP +   
Sbjct: 62  ADMAARAHDVAVLALRGRSACLNFADSAWRLPVPESNDPDVIRRVAAEAAEMFRPVDLES 121

Query: 143 AEDMF-CFDNDAMPGF-----------------------------LADMAEAMLLPPPNC 197
              +  C  +D   GF                             +  +AE  L+ PP  
Sbjct: 122 GITVLPCAGDDVDLGFGSGSGSGSGSEERNSSSYGFGDYEEVSTTMMRLAEGPLMSPPRS 181

[Close]

BLAST of CmaCh02G010470 vs. Swiss-Prot
Match: DRE1A_ARATH (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana GN=DREB1A PE=1 SV=2)

HSP 1 Score: 168.3 bits (425), Expect = 8.4e-41
Identity = 97/134 (72.39%), Postives = 104/134 (77.61%), Query Frame = 1


Query: 7   SSSSNSEFF----TSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKW 66
           S S+ SE F     S  S+  D    LAS  PKK AGRKKF+ETRHP+YRGVRRRNSGKW
Sbjct: 3   SFSAFSEMFGSDYESSVSSGGDYIPTLASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKW 62

Query: 67  VCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPK 126
           VCEVREPNKKTRIWLGTF TAEMAARAHDVAA+ALRGRSACLNFADS   L  P S   K
Sbjct: 63  VCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAK 122

Query: 127 DIQRAAAEAAEAFR 137
           DIQ+AAAEAA AF+
Sbjct: 123 DIQKAAAEAALAFQ 136

[Close]

BLAST of CmaCh02G010470 vs. TrEMBL
Match: A0A0A0KRU7_CUCSA (AP2/ERF domain-containing transcription factor OS=Cucumis sativus GN=Csa_5G174570 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.1e-75
Identity = 160/207 (77.29%), Postives = 169/207 (81.64%), Query Frame = 1


Query: 1   MDFPDASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSG 60
           MDF DASSSS+       RS  SD+ELLLASR+PKKRAGRKKFKETRHP+YRGVR RNSG
Sbjct: 1   MDFSDASSSSH-------RSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSG 60

Query: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLD 120
           KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADS S L  PAS+D
Sbjct: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVD 120

Query: 121 PKDIQRAAAEAAEAFRP--PETAPA---EDMFCFDND---AMPGFLADMAEAMLLPPPNC 180
           PKDIQRAAAEAAEAFRP   E  PA   E+ F  D +    MPG L DMAEAMLLPPPNC
Sbjct: 121 PKDIQRAAAEAAEAFRPQDDELTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNC 180

Query: 181 VAT-DHDDYGPNSMDFDADMSLWSYSI 199
           V   D+D +G NSMDFDADMSLWSYSI
Sbjct: 181 VGNYDNDHFGANSMDFDADMSLWSYSI 200

[Close]

BLAST of CmaCh02G010470 vs. TrEMBL
Match: A0A067JQQ3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26161 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-65
Identity = 141/201 (70.15%), Postives = 154/201 (76.62%), Query Frame = 1


Query: 19  RSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLG 78
           R+NFSDEEL+LAS +PKKRAGRKKF+ETRHPVYRGVRRRNSGKWVCEVREPNKK+RIWLG
Sbjct: 29  RTNFSDEELMLASSYPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLG 88

Query: 79  TFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRP- 138
           TFPTAEMAARAHDVAA+ALRGRSACLNFADS   LP PAS DPKDIQ+AAAEAA AFRP 
Sbjct: 89  TFPTAEMAARAHDVAALALRGRSACLNFADSSWRLPVPASSDPKDIQKAAAEAARAFRPV 148

Query: 139 -----------------PETAPAEDMFCFDNDA---MPGFLADMAEAMLLPPPNCVATDH 198
                             ETA AE MF  D +A   MPG LA+MAE MLLPPP CVA + 
Sbjct: 149 EADGLLGDEFRQENKRATETAEAEGMFYMDEEAVFGMPGLLANMAEGMLLPPPQCVAENG 208

[Close]

BLAST of CmaCh02G010470 vs. TrEMBL
Match: F1CE69_BETPL (CBF transcription factor 2 OS=Betula platyphylla PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.2e-64
Identity = 136/187 (72.73%), Postives = 150/187 (80.21%), Query Frame = 1


Query: 21  NFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTF 80
           + SDEE+ LASR+PKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVR+PNK++RIWLGTF
Sbjct: 18  HLSDEEIQLASRNPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVRQPNKQSRIWLGTF 77

Query: 81  PTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPPET 140
           PTAEMAARAHDVAAIALRG SACLNFADS S LP PAS   K+IQR AAEAAEAFRP ET
Sbjct: 78  PTAEMAARAHDVAAIALRGNSACLNFADSASRLPVPASGTAKEIQRTAAEAAEAFRPTET 137

Query: 141 ------APAEDMFCFDNDA---MPGFLADMAEAMLLPPPNCVATDHDDYGPNSMDFDADM 199
                  P+E +F  D +A   MPG L +MAE MLLPPP C A D D YG + M+  AD+
Sbjct: 138 KAVEERQPSEGVFFMDEEAVFGMPGLLVNMAEGMLLPPPYC-AGDDDGYGGDEMEAHADV 197

[Close]

BLAST of CmaCh02G010470 vs. TrEMBL
Match: J7K128_MORAL (CRT/DRE binding factor 1 OS=Morus alba var. multicaulis PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.4e-63
Identity = 139/210 (66.19%), Postives = 156/210 (74.29%), Query Frame = 1


Query: 5   DASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVC 64
           +AS S +      RR NFSDEE++LAS  PKKRAGRKKFKETRHPVYRGVRRRNSGKWVC
Sbjct: 23  EASDSMSPSDSGGRRMNFSDEEVVLASSCPKKRAGRKKFKETRHPVYRGVRRRNSGKWVC 82

Query: 65  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDI 124
           EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRS CLNFADS   LP PAS DPKDI
Sbjct: 83  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSTCLNFADSAWRLPVPASPDPKDI 142

Query: 125 QRAAAEAAEAFRPPE--------------TAPAEDMFCFDNDA---MPGFLADMAEAMLL 184
           Q+AA+EAAEAFRP +               A +ED+F  D +A   MPG L +MAE MLL
Sbjct: 143 QKAASEAAEAFRPVDMAEDTGEKPAADAAVAESEDVFFMDEEAVFGMPGLLTNMAEGMLL 202

Query: 185 PPPNCVATDHDDYGPNSMDFDADMSLWSYS 198
           PPP+C+     DY  +  +  A++SLWSYS
Sbjct: 203 PPPHCM---EHDYSSDDAEAYANVSLWSYS 229

[Close]

BLAST of CmaCh02G010470 vs. TrEMBL
Match: A9PL44_POPTR (C-repeat binding facor 2 OS=Populus trichocarpa GN=CBF2 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 4.2e-63
Identity = 133/197 (67.51%), Postives = 149/197 (75.63%), Query Frame = 1


Query: 22  FSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFP 81
           FSDEE++LASR+PKKRAGRKKF+ETRHPVYRGVRRRNSGKWVCEVREPNKK+RIWLGTFP
Sbjct: 52  FSDEEVILASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFP 111

Query: 82  TAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPPETA 141
           TA+MAARAHDVAA+ALRGRSACLNFADS   LP PAS D KDIQ+AAAEAAEAFRP  + 
Sbjct: 112 TADMAARAHDVAALALRGRSACLNFADSAWRLPTPASSDAKDIQKAAAEAAEAFRPEGSL 171

Query: 142 PAE-----------------DMFCFDNDA---MPGFLADMAEAMLLPPPNCVATDHDDYG 199
             E                 D+F  D+DA   MPG LA++AE MLLPPPNC      D  
Sbjct: 172 GVELTRTGDEVEKVAGTAAGDVFYMDDDADFGMPGLLANIAEGMLLPPPNCCGYSGGDSL 231

[Close]

BLAST of CmaCh02G010470 vs. TAIR10
Match: AT5G51990.1 (AT5G51990.1 C-repeat-binding factor 4)

HSP 1 Score: 192.6 bits (488), Expect = 2.3e-49
Identity = 121/223 (54.26%), Postives = 145/223 (65.02%), Query Frame = 1


Query: 3   FPDASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKW 62
           FPD+  S +     S  S+ S+    LAS  PKKRAGRKKF+ETRHP+YRGVR+RNSGKW
Sbjct: 8   FPDSFLSISDH--RSPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKW 67

Query: 63  VCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPK 122
           VCEVREPNKK+RIWLGTFPT EMAARAHDVAA+ALRGRSACLNFADS   L  P +  PK
Sbjct: 68  VCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCPK 127

Query: 123 DIQRAAAEAAEAFRPPET-------APAED-------------------MFCFDNDA--- 182
           +IQ+AA+EAA AF+   T       A AE+                   +F  D++A   
Sbjct: 128 EIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEALLG 187

Query: 183 MPGFLADMAEAMLLPPPNCVATDHDDYGPNSMDFDADMSLWSY 197
           MP F  +MAE MLLPPP  V  +H+D+     D   D+SLWS+
Sbjct: 188 MPNFFENMAEGMLLPPPE-VGWNHNDF-----DGVGDVSLWSF 222

[Close]

BLAST of CmaCh02G010470 vs. TAIR10
Match: AT4G25490.1 (AT4G25490.1 C-repeat/DRE binding factor 1)

HSP 1 Score: 183.0 bits (463), Expect = 1.8e-46
Identity = 113/193 (58.55%), Postives = 128/193 (66.32%), Query Frame = 1


Query: 29  LASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTAEMAAR 88
           LA+  PKK AGRKKF+ETRHP+YRGVR+RNSGKWV EVREPNKKTRIWLGTF TAEMAAR
Sbjct: 26  LATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAAR 85

Query: 89  AHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPP---------- 148
           AHDVAA+ALRGRSACLNFADS   L  P S   KDIQ+AAAEAA AF+            
Sbjct: 86  AHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHG 145

Query: 149 ----ETA--------PAEDMFCFDNDAM---PGFLADMAEAMLLPPPNCVATDHDDYGPN 197
               ET          +E  F  D + M   P  L +MAE MLLPPP+ V  +H+  G  
Sbjct: 146 LDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPS-VQWNHNYDG-- 205

[Close]

BLAST of CmaCh02G010470 vs. TAIR10
Match: AT1G63030.1 (AT1G63030.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 182.6 bits (462), Expect = 2.4e-46
Identity = 97/180 (53.89%), Postives = 125/180 (69.44%), Query Frame = 1


Query: 24  DEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTA 83
           ++++ +A   PKKRAGR+ FKETRHP+YRGVRRR+  KWVCEVREP  + R+WLGT+PTA
Sbjct: 3   NDDITVAEMKPKKRAGRRIFKETRHPIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTA 62

Query: 84  EMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPPE---- 143
           +MAARAHDVA +ALRGRSACLNF+DS   LP PAS DP  I+R AAEAAE FRPPE    
Sbjct: 63  DMAARAHDVAVLALRGRSACLNFSDSAWRLPVPASTDPDTIRRTAAEAAEMFRPPEFSTG 122

Query: 144 --TAPAEDMFCFDNDAMPGFLADMAEAMLLPPP-NCVATDHDDYGPNSMDFDADMSLWSY 197
               P+   F   ++ + G +  +AE  L+ PP + +  +   Y    M ++ D+SLWSY
Sbjct: 123 ITVLPSASEFDTSDEGVAGMMMRLAEEPLMSPPRSYIDMNTSVYVDEEMCYE-DLSLWSY 181

[Close]

BLAST of CmaCh02G010470 vs. TAIR10
Match: AT1G12610.1 (AT1G12610.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 170.6 bits (431), Expect = 9.5e-43
Identity = 101/207 (48.79%), Postives = 123/207 (59.42%), Query Frame = 1


Query: 23  SDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPT 82
           ++++++LA   PKKRAGR+ FKETRHPVYRG+RRRN  KWVCEVREP  + RIWLGT+PT
Sbjct: 2   NNDDIILAEMRPKKRAGRRVFKETRHPVYRGIRRRNGDKWVCEVREPTHQRRIWLGTYPT 61

Query: 83  AEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPPETAP 142
           A+MAARAHDVA +ALRGRSACLNFADS   LP P S DP  I+R AAEAAE FRP +   
Sbjct: 62  ADMAARAHDVAVLALRGRSACLNFADSAWRLPVPESNDPDVIRRVAAEAAEMFRPVDLES 121

Query: 143 AEDMF-CFDNDAMPGF-----------------------------LADMAEAMLLPPPNC 197
              +  C  +D   GF                             +  +AE  L+ PP  
Sbjct: 122 GITVLPCAGDDVDLGFGSGSGSGSGSEERNSSSYGFGDYEEVSTTMMRLAEGPLMSPPRS 181

[Close]

BLAST of CmaCh02G010470 vs. TAIR10
Match: AT4G25480.1 (AT4G25480.1 dehydration response element B1A)

HSP 1 Score: 168.3 bits (425), Expect = 4.7e-42
Identity = 97/134 (72.39%), Postives = 104/134 (77.61%), Query Frame = 1


Query: 7   SSSSNSEFF----TSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKW 66
           S S+ SE F     S  S+  D    LAS  PKK AGRKKF+ETRHP+YRGVRRRNSGKW
Sbjct: 3   SFSAFSEMFGSDYESSVSSGGDYIPTLASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKW 62

Query: 67  VCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPK 126
           VCEVREPNKKTRIWLGTF TAEMAARAHDVAA+ALRGRSACLNFADS   L  P S   K
Sbjct: 63  VCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAK 122

Query: 127 DIQRAAAEAAEAFR 137
           DIQ+AAAEAA AF+
Sbjct: 123 DIQKAAAEAALAFQ 136

[Close]

BLAST of CmaCh02G010470 vs. NCBI nr
Match: gi|449451912|ref|XP_004143704.1| (PREDICTED: dehydration-responsive element-binding protein 1B-like [Cucumis sativus])

HSP 1 Score: 290.0 bits (741), Expect = 3.0e-75
Identity = 160/207 (77.29%), Postives = 169/207 (81.64%), Query Frame = 1


Query: 1   MDFPDASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSG 60
           MDF DASSSS+       RS  SD+ELLLASR+PKKRAGRKKFKETRHP+YRGVR RNSG
Sbjct: 1   MDFSDASSSSH-------RSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSG 60

Query: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLD 120
           KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADS S L  PAS+D
Sbjct: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVD 120

Query: 121 PKDIQRAAAEAAEAFRP--PETAPA---EDMFCFDND---AMPGFLADMAEAMLLPPPNC 180
           PKDIQRAAAEAAEAFRP   E  PA   E+ F  D +    MPG L DMAEAMLLPPPNC
Sbjct: 121 PKDIQRAAAEAAEAFRPQDDELTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNC 180

Query: 181 VAT-DHDDYGPNSMDFDADMSLWSYSI 199
           V   D+D +G NSMDFDADMSLWSYSI
Sbjct: 181 VGNYDNDHFGANSMDFDADMSLWSYSI 200

[Close]

BLAST of CmaCh02G010470 vs. NCBI nr
Match: gi|659073013|ref|XP_008467214.1| (PREDICTED: dehydration-responsive element-binding protein 1D-like [Cucumis melo])

HSP 1 Score: 288.5 bits (737), Expect = 8.9e-75
Identity = 157/208 (75.48%), Postives = 168/208 (80.77%), Query Frame = 1


Query: 1   MDFPDASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSG 60
           M+  DASSSS+       RS  SD+ELLLASR+PKKRAGRKKFKETRHP+YRGVR RNSG
Sbjct: 1   MELSDASSSSH-------RSTLSDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSG 60

Query: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLD 120
           KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADS S L  PAS+D
Sbjct: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVD 120

Query: 121 PKDIQRAAAEAAEAFRPPE------TAPAEDMFCFDND---AMPGFLADMAEAMLLPPPN 180
           PKDIQRAAAEAAEAFRPP+       A  E+ F  D +    MPG L DMAEAMLLPPPN
Sbjct: 121 PKDIQRAAAEAAEAFRPPDDHEYLRPAVVEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPN 180

Query: 181 CVAT-DHDDYGPNSMDFDADMSLWSYSI 199
           CV   D+D +G NSMDFDADMSLWSYSI
Sbjct: 181 CVGNYDNDHFGANSMDFDADMSLWSYSI 201

[Close]

BLAST of CmaCh02G010470 vs. NCBI nr
Match: gi|802769328|ref|XP_012090326.1| (PREDICTED: dehydration-responsive element-binding protein 1A [Jatropha curcas])

HSP 1 Score: 257.7 bits (657), Expect = 1.7e-65
Identity = 141/201 (70.15%), Postives = 154/201 (76.62%), Query Frame = 1


Query: 19  RSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLG 78
           R+NFSDEEL+LAS +PKKRAGRKKF+ETRHPVYRGVRRRNSGKWVCEVREPNKK+RIWLG
Sbjct: 29  RTNFSDEELMLASSYPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLG 88

Query: 79  TFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRP- 138
           TFPTAEMAARAHDVAA+ALRGRSACLNFADS   LP PAS DPKDIQ+AAAEAA AFRP 
Sbjct: 89  TFPTAEMAARAHDVAALALRGRSACLNFADSSWRLPVPASSDPKDIQKAAAEAARAFRPV 148

Query: 139 -----------------PETAPAEDMFCFDNDA---MPGFLADMAEAMLLPPPNCVATDH 198
                             ETA AE MF  D +A   MPG LA+MAE MLLPPP CVA + 
Sbjct: 149 EADGLLGDEFRQENKRATETAEAEGMFYMDEEAVFGMPGLLANMAEGMLLPPPQCVAENG 208

[Close]

BLAST of CmaCh02G010470 vs. NCBI nr
Match: gi|325512539|gb|ADZ23480.1| (CBF transcription factor 2 [Betula platyphylla])

HSP 1 Score: 253.4 bits (646), Expect = 3.2e-64
Identity = 136/187 (72.73%), Postives = 150/187 (80.21%), Query Frame = 1


Query: 21  NFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTF 80
           + SDEE+ LASR+PKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVR+PNK++RIWLGTF
Sbjct: 18  HLSDEEIQLASRNPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVRQPNKQSRIWLGTF 77

Query: 81  PTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDIQRAAAEAAEAFRPPET 140
           PTAEMAARAHDVAAIALRG SACLNFADS S LP PAS   K+IQR AAEAAEAFRP ET
Sbjct: 78  PTAEMAARAHDVAAIALRGNSACLNFADSASRLPVPASGTAKEIQRTAAEAAEAFRPTET 137

Query: 141 ------APAEDMFCFDNDA---MPGFLADMAEAMLLPPPNCVATDHDDYGPNSMDFDADM 199
                  P+E +F  D +A   MPG L +MAE MLLPPP C A D D YG + M+  AD+
Sbjct: 138 KAVEERQPSEGVFFMDEEAVFGMPGLLVNMAEGMLLPPPYC-AGDDDGYGGDEMEAHADV 197

[Close]

BLAST of CmaCh02G010470 vs. NCBI nr
Match: gi|402483605|gb|AFQ59977.1| (CRT/DRE binding factor 1 [Morus alba var. multicaulis])

HSP 1 Score: 250.8 bits (639), Expect = 2.0e-63
Identity = 139/210 (66.19%), Postives = 156/210 (74.29%), Query Frame = 1


Query: 5   DASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVC 64
           +AS S +      RR NFSDEE++LAS  PKKRAGRKKFKETRHPVYRGVRRRNSGKWVC
Sbjct: 23  EASDSMSPSDSGGRRMNFSDEEVVLASSCPKKRAGRKKFKETRHPVYRGVRRRNSGKWVC 82

Query: 65  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLDPKDI 124
           EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRS CLNFADS   LP PAS DPKDI
Sbjct: 83  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSTCLNFADSAWRLPVPASPDPKDI 142

Query: 125 QRAAAEAAEAFRPPE--------------TAPAEDMFCFDNDA---MPGFLADMAEAMLL 184
           Q+AA+EAAEAFRP +               A +ED+F  D +A   MPG L +MAE MLL
Sbjct: 143 QKAASEAAEAFRPVDMAEDTGEKPAADAAVAESEDVFFMDEEAVFGMPGLLTNMAEGMLL 202

Query: 185 PPPNCVATDHDDYGPNSMDFDADMSLWSYS 198
           PPP+C+     DY  +  +  A++SLWSYS
Sbjct: 203 PPPHCM---EHDYSSDDAEAYANVSLWSYS 229

The following BLAST results are available for this feature:

BLAST of CmaCh02G010470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DRE1D_ARATH	4.1e-48	54.26	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana GN=DRE...	[more]
DRE1B_ARATH	3.3e-45	58.55	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DRE...	[more]
DRE1E_ARATH	4.3e-45	53.89	Dehydration-responsive element-binding protein 1E OS=Arabidopsis thaliana GN=DRE...	[more]
DRE1F_ARATH	1.7e-41	48.79	Dehydration-responsive element-binding protein 1F OS=Arabidopsis thaliana GN=DRE...	[more]
DRE1A_ARATH	8.4e-41	72.39	Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana GN=DRE...	[more]

BLAST of CmaCh02G010470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRU7_CUCSA	2.1e-75	77.29	AP2/ERF domain-containing transcription factor OS=Cucumis sativus GN=Csa_5G17457...	[more]
A0A067JQQ3_JATCU	1.2e-65	70.15	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26161 PE=4 SV=1	[more]
F1CE69_BETPL	2.2e-64	72.73	CBF transcription factor 2 OS=Betula platyphylla PE=2 SV=1	[more]
J7K128_MORAL	1.4e-63	66.19	CRT/DRE binding factor 1 OS=Morus alba var. multicaulis PE=2 SV=1	[more]
A9PL44_POPTR	4.2e-63	67.51	C-repeat binding facor 2 OS=Populus trichocarpa GN=CBF2 PE=4 SV=1	[more]

BLAST of CmaCh02G010470 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G51990.1	2.3e-49	54.26	C-repeat-binding factor 4	[more]
AT4G25490.1	1.8e-46	58.55	C-repeat/DRE binding factor 1	[more]
AT1G63030.1	2.4e-46	53.89	Integrase-type DNA-binding superfamily protein	[more]
AT1G12610.1	9.5e-43	48.79	Integrase-type DNA-binding superfamily protein	[more]
AT4G25480.1	4.7e-42	72.39	dehydration response element B1A	[more]

BLAST of CmaCh02G010470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451912\|ref\|XP_004143704.1\|	3.0e-75	77.29	PREDICTED: dehydration-responsive element-binding protein 1B-like [Cucumis sativ...	[more]
gi\|659073013\|ref\|XP_008467214.1\|	8.9e-75	75.48	PREDICTED: dehydration-responsive element-binding protein 1D-like [Cucumis melo]	[more]
gi\|802769328\|ref\|XP_012090326.1\|	1.7e-65	70.15	PREDICTED: dehydration-responsive element-binding protein 1A [Jatropha curcas]	[more]
gi\|325512539\|gb\|ADZ23480.1\|	3.2e-64	72.73	CBF transcription factor 2 [Betula platyphylla]	[more]
gi\|402483605\|gb\|AFQ59977.1\|	2.0e-63	66.19	CRT/DRE binding factor 1 [Morus alba var. multicaulis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G010470.1	CmaCh02G010470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 73..89 score: 1.9E-9coord: 51..62 score: 1.
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 50..109 score: 9.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 49..99 score: 1.4
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 50..113 score: 6.5
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 50..107 score: 22
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 50..109 score: 5.17
None	No IPR available	PANTHER	PTHR31839	FAMILY NOT NAMED	coord: 6..198 score: 8.0E
None	No IPR available	PANTHER	PTHR31839:SF8	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1A-RELATED	coord: 6..198 score: 8.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh02G010470	Cucsa.166340	Cucumber (Gy14) v1	cgycmaB0469
CmaCh02G010470	Cla002330	Watermelon (97103) v1	cmawmB569
CmaCh02G010470	Csa5G174570	Cucumber (Chinese Long) v2	cmacuB609
CmaCh02G010470	MELO3C005367	Melon (DHL92) v3.5.1	cmameB531
CmaCh02G010470	ClCG01G005660	Watermelon (Charleston Gray)	cmawcgB519
CmaCh02G010470	CSPI05G08480	Wild cucumber (PI 183967)	cmacpiB615
CmaCh02G010470	CmoCh02G010610	Cucurbita moschata (Rifu)	cmacmoB619
CmaCh02G010470	Lsi09G005960	Bottle gourd (USVL1VR-Ls)	cmalsiB531
CmaCh02G010470	Cp4.1LG05g06700	Cucurbita pepo (Zucchini)	cmacpeB646
CmaCh02G010470	MELO3C005367.2	Melon (DHL92) v3.6.1	cmamedB610
CmaCh02G010470	CsaV3_5G005890	Cucumber (Chinese Long) v3	cmacucB0731
CmaCh02G010470	Cla97C01G005910	Watermelon (97103) v2	cmawmbB601
CmaCh02G010470	CsGy5G005870	Cucumber (Gy14) v2	cgybcmaB636
CmaCh02G010470	Carg08431	Silver-seed gourd	carcmaB0999

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh02G010470	CmaCh02G014860	Cucurbita maxima (Rimu)	cmacmaB495

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh02G010470	Watermelon (97103) v2	cmawmbB649
CmaCh02G010470	Wax gourd	cmawgoB0723
CmaCh02G010470	Wax gourd	cmawgoB0729
CmaCh02G010470	Cucurbita maxima (Rimu)	cmacmaB263
CmaCh02G010470	Cucurbita maxima (Rimu)	cmacmaB346
CmaCh02G010470	Cucurbita maxima (Rimu)	cmacmaB396
CmaCh02G010470	Cucurbita moschata (Rifu)	cmacmoB587
CmaCh02G010470	Cucurbita moschata (Rifu)	cmacmoB591
CmaCh02G010470	Wild cucumber (PI 183967)	cmacpiB601
CmaCh02G010470	Wild cucumber (PI 183967)	cmacpiB611
CmaCh02G010470	Cucumber (Chinese Long) v2	cmacuB596
CmaCh02G010470	Melon (DHL92) v3.5.1	cmameB579
CmaCh02G010470	Watermelon (Charleston Gray)	cmawcgB559
CmaCh02G010470	Watermelon (Charleston Gray)	cmawcgB563
CmaCh02G010470	Watermelon (97103) v1	cmawmB564
CmaCh02G010470	Cucurbita pepo (Zucchini)	cmacpeB598
CmaCh02G010470	Cucurbita pepo (Zucchini)	cmacpeB608
CmaCh02G010470	Cucurbita pepo (Zucchini)	cmacpeB639
CmaCh02G010470	Bottle gourd (USVL1VR-Ls)	cmalsiB583
CmaCh02G010470	Cucumber (Gy14) v2	cgybcmaB394
CmaCh02G010470	Melon (DHL92) v3.6.1	cmamedB661
CmaCh02G010470	Melon (DHL92) v3.6.1	cmamedB664
CmaCh02G010470	Cucumber (Chinese Long) v3	cmacucB0711