CsaV3_4G037870 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G037870
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Dual-specificity rna methyltransferase rlmn
Location	chr4 : 26474217 .. 26485085 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATATTTATCCATCTATCAAATATTATTGATATGAAAGTTTTGAAGTTCATAAATATGATATGATTGAACGTAATATTTGATTTGATAGCCCATTATTAAAGAGGATACGCGACTTTCCGAGGGTGGTTTTACGAAAATGTCCAGGAAGATAATGAATTTGAGGGGTGGCCGTGTTTTCCACTCAATCAACACTCTTAATCGATTCGACAACGTGATAATTTCAGGGGTTTCATGGCAGTGAATAATTTTGGCTTCAAAGTTTGAAACAGAGAGCCAAGGGACTATGGCCGCTTGCTGTTCCTGGAAAACCATACCAATTTCCTCCTCTTCCGCTCGAGGTCTTCTTCACCGTTCCTCCTCTTCTCCCTCTGCATCTCATTTTGTGTCCAATCCTACTATGTCTGGCGGACTTCCTTCTGCAAAGCCGCCCGCATCTTCCCGCTTCTCTGTTCATAGGTTAACCAACTTCAGGTTGTATTTATTTATTTATTTCCTTTTTTTGTATTCGCTCTTTTTCGATTGGAAAGTATGCTGGAACTATATGAATCCATAATGTAATGTCGTCTTTTTCGGCTCCAAAATGTGGCATTTCTCAATTTCAATTGCCCCAACTTTTTGTTTTTTCCTTTCTTTTACTAGCTTATTGGATTTAATCCATGTTATTTTCAGCCTCTACATCCCTAAAGAGGCCATCCTTTTTCTTCTCTAAAATATAAGTACTGACCCTAGTGCACTTAATGGTTGGCTCATTTATTTTCACCCATCCACGATCAATTTATAGGATTCTGTGCGTTTCTCTACTTAATGAAGATAATCATGACGGCTAAGTGATTTTATGCTAAATGTCGCTGGTTCTTCAGGCTTCCAGTGGAGTTAGCAAGCATGCAGTCTCTAATGCCATTGCGCAGTGTTACTGCTTCTCCCTTGTTTACTTCGTTGCTTTCCTTCCACAACAACAGTTGGGGTTGTCTATCTAAAGGTAACCTTTCTAGTTTTAGTCTTTTAGCTCATTCTACATTGCCTAAATTAGCTCATCGGAAATTTCCAACATATACTATTTGTTATTAGGATCTTATAAGTTTATTGTAGTTATACTATCTTCAAGTTATTGCAATTTGGTATTCCTGTTTTGGTAATTGACGTGTGTTTTGTTAAACAACCTGTAAATTGTTAACCATATTTTGACGTTTTATTGATTCTGTAATCACGCCCCTGTTATCCCTTGTTTGTTCGGATTTAACTTCTTGTTAGGCAATTTCCTGTTTTTCTTACTTCCAGGTAACCTCTCTAGTTTTAGGCTTTTAGCTCATTCCATATTGTCTAAATTAGCTCACCTGAAATTTCCAACATATACTCTTTGATAAGTTATTAGGATATTTGAGCTTTCTTGTAGTTATACTGTTCTTTGTTGGAATTTGGTATTCCTGTTTTGGTTATTGATGCATGTTTTGATAAAACACCTGTAAAAAGTCAACCATAGTCTGACTTTTTATTGCCCCATTTGTTTGGATGTAACTTCTTGTTATGGTAAATGGTGATTTCCCGGTTTTCTTACTTCCAGAAAGACGGAACACTTAAGTATGAGCTCACCTACGCCGTTATTTGCTCTTTACAATTCTTCACTTTATTTATGTTTGTTCCTAAGCATCTGTAGTTGTCTTTTTACATTCTTCTACAGCTTTTTTCCTTTTGAATTTCTTTTTTAAATTTTCTATGACCCATGCTTCAATTATGCTCTCATTTTGTTGAAATGATACTTTTGGTGATCTCTTTTTTTGTAGCTATGCCTGAGGAAAAAGAAATCTTGAACGCTGATTTCAACTCCAAGATGCTTCTAAAGGGCCTGTCTTACACCGAACTTGAGGCAAGTCCTTGCTAAACTCTCTCTTTCTTGTATCTTTTTCAAAAAATGCTCTTTCTCGTTTGCACTTATTTCTCTCTTCTTCTTCCACGCTTAATGAAGAAAACCCTTTGATCTGATACACATGTTCTAATTTTTGTTTTTACTCGAATACGTACACTGATAGAAATGGGTTCAAGCTCAAGGATACAGACCTGGCCAAGCTTTAATGCTGTGGAAACGTCTTTATGGGGATAACATTTGGGCACATACCGGTGATGAATTAGAAGGTCTTCTTGCTTTCTTTACTTATTTGGAATATGAATCTTTCTTTAGACTTTAACATTTTCATTGGTAGCTGATTTTTTTCCTTGATTTGCTTTCCTCTTGTTGTAACTCGTAACCTATCTACTCTATCCAATGACTTTTTCTTTGCTATAAAATCTTAGGGTTAAACAAGGATTTTAAGAAAATGTTGATTGAAAACGCTGAGTTCAGGGCATTGTCTTTGAGGGAAATTCTCCCTTCATGTGATGGAACGAGGAAGGTCTGTATAGTTTCATTCTAGCAAGTACTGTTATAATCATTTAATTTCTTTACTTTTTTTGCTGTGTGTTCTGGCTCCACATTGTAAAATCATTTGTTTTTTTCTAAAACCAAAATGAAACTTTGACTGAATAAATGAAAGGAGATTATTGGTCAAAGCACAAAGAAACAATATTGTAATGAATGTGAATGATGTTCAAAGTAAAAAGACAAGTAAGACAGAGAAAACTTAGACCAGGGGACATAAGAACTAATCAGAAAACAATGATATTCCAGATTAAAGATAAATTTTGAATAGAGAGTCTTCTATAAGACTTGGATGGAGTGCACCAAGAAAAGGTCTAAACCGAACATGCTCGAACCAATTAAATCAAGGAATAGATGTTGACCGGCCGAACAAACTTGACTTACGTACAAAACCTTGGTCTGGAAAAAAAAATTTGCGTTGCCAATACAACATATTTTACCTAACAGAGGAACAACTTCATGCAGATTAGCTCCATGAAACTCCCTAAGAAGACCCAAAGAACTCAAAGCTTATGGATAAAAATTCTTGAATACCGCTTCCAGGGAGTAACTTCACTAAAATGCACTACACCAATATCATCATTTTTATTTAACTAGAAACAAGCCTCTTCATTAAGATAATGAAATGAGACAAATGCTTAAAGTACAAGCAATACAAAAAAAGAAAAATAGGATCCGTAAGTGCACTCTGATATGATGTAGTAGGAACTAGGGTATTATGGTCAAATCCTTAATTTATTAGGATTAGGAATAGGATTATTTTCTTTTATTAATTAGGATCAAGATTAGTTTCTTTTATTAATTAGGATTAGAATTAGTTTATACTAAAAGCGGTAAAGAAAATAGACACTAAGTTGTGTGGAAACTCGAGTACCAGGAGAAAAACCACCATATGACTTTTTTTTAAAATTTCTCATGTTAACAAATGATACAAAGTGGAAACAAATAAACAACATGCTTGTGATAAAAAAGGAGAGAAAATTAGGTTAAATCCTTCCTTGGGCCAAGTCCACTAATTCTAACACTCCCCCTCAAGTTAGGACGTAGATATCAATGAGACCCAACTTGCTAACACATGAGTCAAAGCTTTGAAAAGCCCCTTGGTGAGAACATCAACAACCTGTTGGCTCGGGGGATGTAAGGAATGCATGTGCTACCATTGCCCAATCTTTCTTTAATGAAGTGTCGACCAATCTCCATATGTTTAGTTTTATCATGTTGAACTGGATTGTTGGCAATGCTAATAGCTGCCTTATTATCACAGAATAATTTCATCGGCACCTCACAGTCCTAATGAAGGTCAGATAAACTTTTTTAAGCCAAATTTCCTCATATATCCTCAAACTCATAGCTCTGTATACAACTTCAACACTGCTTCTAGCCACAACCCTTTGCTTCTTACTCCAAGTTTTGCAAAATTGCCCCATATAAAGATATAGTAGCCTGAGGTGGATTTCCTATTAACGACGGACCATGCCCAGTCAGAATCAGTATAGGCCTCAATAGCTCTCCTGTCGGTCTTCTTGAACATAAACCCTTTATCAAGAGTTGTTTTTAAGTACCTCAAGATTTTGTTAACTGCCTCCATGTGTTCCTCACAGGGAGCCTGCATGAACTGGCTAACGGTTCTCACATCATAAGAGATATATGGTGGAGTATGTGACAAGTAAATCAACTTTCCCACAAGGTGTTGATATTTTTCTTTATCAGCTGGAGCTTTATCACCTGAATTTCCCAATTTACAGTTGAATTCAACAGGAGCATCAGTAGGACGATATCCCAACACACCTGTCTCGATCAACAAATCGAGGGTATACTTCCTTTGAGATACGAAGATACCTTCTTTTGATCTAGCTACCCCATCCTAAGGAAATATTTTAGATTCCCCAAGTCATTAATTTCAAACTCATCACCCATCTTCTTTTTCAATTGGATGATCTTAGTGATGTCATACCCAAATAAAACAATGTCATCAATACAAACAATCAACACGGCAAGCTTTCCAGCCTTGGAGACTTTTGTTGACAAGGTGTGATCAATCATGCTCTCGATGATTGTTCTAGTCCATACAAGGATTTCTGAAGTTTGCAAACCCAATGATCAAACTGGGCTCCAAACCCTAGAGGGGGGATCATATAGACTTCCTCTTCCAAGTATCCATTCAAGAATGCATTCTTAACATCTAATTGATATAGAAGCCAATTTTTATTCACAGCAACAGCTAACAGGACTTCAACAGTATCTAGTGTTGCAACTGGAGAAAAGGTTTCTAAATAATCGACACTATAGGTTTCAGTAAACTCTTTTGCAACTAACCTAGCCTAGTGTCTGTCAAGAGCTTCATTTGCCTTGTATTGAGTGTGAACCCATTTACATCCCATGGTTTTATGCTCCTTGGGAAGAGTACAGATCTCCCAAGTTTTATTCTTTTCAAGAGCTCTCATCTCTTCCATAACTGTTGTTTTTCACTCAAGACATTCTAAAACAATGTGGATATTTTTAGGTGTCATGGTAGAATCAAGGCTGGCTATGAAAACTTTAAACTGTGGTGATAGACTCTCATAGGAAACATAGTTACAAATGGTGTGCTTTGTGCAGGACCTAGTACCTTTTCTCAGCACATTAGGAATGTCAAGAGAAGGATCATACATTTATACTCATCTAGATTACTTGAATGATCATGTTCAGTCTCATTACCAACAATTTCTCCTCTAACCTCAACCTTGTCAACACTGTCCTTTCTCCCATATCTTCAGGAACAACTATATCAAAGCTGTCATTCTCACTCATTTTACTATCAACACAAGTCGATAGGATTAGTCATACCTTGATCTTATGGTGGTTTAGAGTCTTGGACCGGAGCTGGTTGATCAGTAGGGGATCCAATTTCCTTTTCGAGATTCCTCTTATAATAGGTTTTTCAGGGTTCAGGGAACTAGGTTTATAGGTTAGACTGTGTGATGAGGATTGGGGTTAGGTAAGGTAACAAGATTAGGACTGGTAGACTCTTCACTCACACCTCGCTCTAAAGATGGCTAACAGGAAAAGAAAGGTCGATCCTCAAGAAAAGTGGCATTCATAGTGGCAAAGTATTTAGGGAAGGAGGATGGGAACATTTATAGCCCCGCTGATGAAGAGAATACCCAACAAACACACACGCCTAAGCCCGAGGGGTGAATTTGGTCTCTTTATGGCCAAAGCTATGAACATAGGTTGTAGCTGTACACCCAAACCCTTCGAGGGGAACCTCAGAAGTGAGGCAGGTAGAGGAGACATCAATGGTACAAAGTGTTTTATCTTATACCATATTGAAAGCAATAAAAAGGAATATGATACTGAGTTACGTGAAAACCTGAGAACCGGGAGAAAAATTTATTTTCTCGTATTAACAAAAGGTACAATTGGGGAAAATAAATAGACATGCTTAATGTGAAAAAGGAAAGAATAATAGGGTTAATCTTTATTTGGGCTTAAGCGCACTTATTCTAACAGAAAGAAGAGATTTTTTGAAGTTAGGAATCGGGGGAAGAAGAGGGAGATGAAGAGGACTTGGAGTTGAATTAACTGTGAATATTTTTGTGGAAATTCATTGATGGGATCTATGCCTTTAAATTTCAAAGTTTGGACTCGTGAATATTCTGTGTTAACTGTGAATGATTACTACACTATTATTGTTCTTTCCTTTAGTTCTTTGGCTTTGTGCTCTCAAAGATTAGTCTGATTAATTTTAAAGCTCACAGGATATTACAGATTTTGTTCAATCTGGAAGATGGCCTGATAATAGAAACTGTTGTTATACCTTGCGATAGGGGCAGGACCACTGTTTGCGTTTCAAGTCAAGTGGGTTGTGCCATGAACTGTCAATTCTGCTACACCGGCAGGCAAGCTCCAATCTTCAATTCCGTGCATGATCTTAATTGAATTAAACAATAATGATTAGATTGTTTTTTTTTTTGTTAGATATTATATTAAATTTGTCTTCATCCATTAGCTTAAGCTTTTAGGTTAAATTGTGGTTTAAGATGGTATCTGAGTAGGTGATCCAGGGAGGTTATGTGTTCAAGTCATTGTGTTGTTGTTTTCTCTCCAATTAATATTAATTTCTACTTGTTGGGTCTTTTTTCACATTTCAAGCTCACAAGTGAGAGGGAGTGTTAGATATTATATTGAATTTGCTTTCATCCATTCACTTGAGCTTTTGGATCACTTGATGATTCAAGATTTTTTTATTCAATTTTTTCAGGATGGGCCTAAAGAGACACCTGACTGCTGCTGAGATAGTAGAACAGGCAGTTTTTGCAAGGCGTTTGCTTACCAGTGAAGTGGGTTTAATTACTAATGTTGTGTTTATGGTATGTTTAAGATCTGAAACTATTTAAAATACAAGAAAAATGAAATATATTGAAATTTTTGTCTTTTTTGGGATTTTTGTATTCTTTTAACATGCTGATCTACTGTATATTCAGTTTCTGGTTTATTTACCAAGGAAAATTTCATTATGGTAGCAAATAAGGAGATTTTAAAAGCAAAAGGAAAGAATATTGTTGGTAAGAACGAGGATCGGAGTAACATTTTATTGATGGTGGTCCTATTGGTTTGGCACTCTTACATAAGAATGATTTTCTTTCAATTTGTTGTGCCTATAATGTTCTTTTGTTTTTTTTGTTTTAAACGGTAACAAGCCTCTTCATTAATAAAATAAAATAGAGTAAAGCTCAAAGTACAAGAGAATTATACAAAAAGCTAGAAATACAAATGGACAAGGATTAGGAGACGCAGTTGGACATCTGAACTAGGTTGGCACCCCCTTAGCTCCATCATATCCGAACTACTAAAATTGGTGAAATAAACATGCCCTACAAAAGACCAAGACTCCCAACAATCTGTATAAGTGAGTAATCAGATACAAAGGCAACAAAATTCAAAGTCAAAGGACTTCAAAAATCTCCAAACAAACGAGAGTCTAATTGGAAATAATACAAACGATAAGCTGGAAAAAACAAAAGAGCTCAAAAAGCATGATAGTAGTATTCTGTGAAAAACTTGGAGAAGGAACACCAGAGGGAGGCGGTCTGAATAAGCCAAAACAATGCTGAAGAACAAAAAGAAACTTCATTCTTGAGGATACCTCTTCTAGGCCTCTTAATATCGATGAGAGAATCTTCCTTTAGGACAAAACAAGCATGAGCTTCTTACTTTGATATTTAGGCGAGAATTAGTTAACCAAAGAAAACGGCTATCAATCAATACTAAAGGAGATCTTCTACGGGATGAAAGGATTTGAGAGAGTTTGAGTAAATGGTGCCTATTTAAGAATTCGAAACACAAACGAAGGAATAAGCTCTAATCAAAGGGTCCATGTTCAGTTGCTTCTGCAATCCTTTGACGGTTGATGCACTTTAATCAAAGGGTCAATGTTCAGGAAGTCTACATGAGCCCCCTGCCTGGTTTTGAAGCCCAGTTGGGTCAGCATGTGTGTAAACTCCATAAATCCCTATATGGTCTGAAATAGTCTCCTAGAACATGGTTTGACAGATTCACTACCTTTGTCAAGTCCCAAGGGTATAGTCAGGGGCACTCTGATCATACTTTATTTATAAAGGTTTCCAAGACAGGGAAGATTGTTGTTCTAATAGTTTATGTGGATGACATTGTTTTGACTGGAGATGATCAGGCAGAAATCAGTCAACTAAAGCAGAGAATGGATGATGAATTTGAAATCAAGGATTTGGGAAATCTGAAATATTTCTTTGGAATGGAGGTGACTAGATCTAAAGAAGGTATCTCTGTGTCTCAGAGAAAATACACCATTGATTTACTAAGACGGGTATGTTGGGATGTCATCCCACTGACACTCCTATTGAATTCGACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACATTATCAGCGCCTCATGAGTAAATTGATTTACTTATCCCATGCTCGTCCTGATATTTCCTTTGTTGTGAGTGTTGTTAGTCAGTTTATGCAGGCTCCTTATGAGAAACACATGAAAATTGTCAACAGAATTTTGAGATACTTGAAATCACCACCTAGTAAAGAGCCGATGTTTAGAAAAACAGACAAAAAGACCATTGAGGCATATACTGACTCGGATTGGGCAGGATCTGTTGTTGATTAAAAGTCTACCTCCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGCGCTAGAGCCGAATACAGAGCTATGAGTTTGGGAATATATGAGGAAATTTGGCTTCAAAAAGTTCTGTCGGATCTTCATCAGGAATGTGAGACACCATTGAAGCTTTTCTGTGATAATAAAGCCGCTATTAGTATTGCTAACAACCCTGTTCAACATGATAGAACTAAACATGTTGAGATTGATCAGCATTTCATCAAAGAAAAACTTGACAGTAGGAGCATATGCATTATGTACATTCCTTCGAGTCAACGGGTTGCTAATGTTCTTACCAAGGGGCTTCTCAAACCAAACTTCAACTTTTCTGTTAGCAAGTTGGACCTCATTGATATTTACGTCCCAACTTGAGGGAGTGTTAGAATCTTTTCCTTATTTTCTAAATATTTTCCTTGTTAGAATCCTAGAATATTTATGAAAAGGTTATGGGAATATTTTCCTTATTTCCTAAATCTTTTTCTTTTTTATTTCCTTGTATACTCTATTTATTCTCCCTTGTACCTATTGTATTATTTATTAAAGAATAACAACAAACAATCGTGGTTTTTTTCCTAGTACTCGAGTTTCCACGTAAATCGGTGTGTGCACTTTGTCTCTCATTTCAATAGTTTCCATTGTTAAAACCTTCGGACATTTATAATGGGTTGTCTCAGGAGAACCATTATCCTTTTCCATGTTTTGATCACAATAACTGAAATTGATTAATTAGGGAATGGGAGAGCCACTTCACAACATTGACAATGTCATTAAAGCTGTAAATATAATGGTTCATGAACAAGGACTTCATTTCAGTCCACGCAAGGTCACTGTTTCAACCAGTGGACTTGTTCCCCAGCTGAAACGTTTCCTGAATGAATGTAACTGTGCTTTAGCTGTTAGTTTGAATGCAACTACTGATGAGGTACGTGCTTGCAGTTGGCATTAATCAAATGCTTGAAATAAAAAATGTGAAGAATTCCCTTCTCTTGCATTGGAAAATTGCAGGTTAGGAATTGGATCATGCCAATAAACCGAAAGTATAAGTTAGGCTTGCTTCTTCAAACTTTACGGGAGGAACTTCGTTGCAAGCACAAGTACAAGGTTCTTTTTGAATATGTGATGCTTGCTGGGGTTAATGATAGGTATGTCAACAATTTCTATGTTTGAACTAAATCATTTTGCTTTAACTGGAGCTATAGACTATAGTTGATGATTTTATCAAAATTTTCTTTACAATCATTTTTATCTTTTGTTTTAATTTTACATGCAGCATTGAAGATGCAAAGAGGATCGTTGATCTTGTCCAGGGTATTCCATGCAAGATTAACCTTATTTCATTTAATCCACATTGTGGATCTCAATTTAGACCTACCTGTAAGGAGAAGATGATTGGGTTTCGAAATGTTTTGGCTGAAGCCGGGTTGACTGTTTTCTTGCGACTAAGTAGAGGTGATGACCAGATGGCTGCGTGTGGTCAGTTAGGCAAACCCGGTATTGTTCAAGCTCCTTTACTTCGTGTGCCAGATCGATTTCAAATGGCAATGAAATTATGTCTCTAGTTCCTACATCAAGGTTAAAACACATTGGCATCACTCCATTGACGTGGCAAAAATGGTGTGCAGGCTTACGGGCATTGGTTGGAATTTATGCCTGTCTTTAGCTTTCAATTCTTCTTGAAGGGGAAGCTATGTATTCAGCCCCCCTCTTCTTGGAGGCAAAGCTATGCATTCAGCCCCAGATCAAAAAGTTCAACCCTCACGTTTTTGTAAAGTTATTTTCATTCTTTTATGTTCTTTTTAACTTATACCCTTACTTTTGGGAAAAATTTTGGAATTGATATTTAGAACCAATTGTATGTCATTCGTATGGAAATAGTGCGTTTGACAAACTTAAGATAGTTGAACTTGTGATGCAAAACTAGAAAACATAGATTCGTTTCAGGGTTGTGTTAGTACGTTATTTGAGTTTAGATAGATATATGATAGACCCCTATCTTACATAAGTACAGCAGAAGAGAGAAAAATGAGGAACGCGTGCATATGAATGACACGCGAGAATTGACAAAGGGAAGGGCTAGTAGTTCGTATAAATAAAAGTTAGTAAGTGGGAAAGTCGGTTATGTTTTGAATTTAGAGATATCTTTTTGTTCTTCCTTGAAAGAAATTTTGACATTGTAGCAAGGAATTCATTCCTATATTATCATCGATAATAATTGAAATTTCATACTACATCCG

mRNA sequence

ATGGCCGCTTGCTGTTCCTGGAAAACCATACCAATTTCCTCCTCTTCCGCTCGAGGTCTTCTTCACCGTTCCTCCTCTTCTCCCTCTGCATCTCATTTTGTGTCCAATCCTACTATGTCTGGCGGACTTCCTTCTGCAAAGCCGCCCGCATCTTCCCGCTTCTCTGTTCATAGGTTAACCAACTTCAGGCTTCCAGTGGAGTTAGCAAGCATGCAGTCTCTAATGCCATTGCGCAGTGTTACTGCTTCTCCCTTGTTTACTTCGTTGCTTTCCTTCCACAACAACAGTTGGGGTTGTCTATCTAAAGCTATGCCTGAGGAAAAAGAAATCTTGAACGCTGATTTCAACTCCAAGATGCTTCTAAAGGGCCTGTCTTACACCGAACTTGAGAAATGGGTTCAAGCTCAAGGATACAGACCTGGCCAAGCTTTAATGCTGTGGAAACGTCTTTATGGGGATAACATTTGGGCACATACCGGTGATGAATTAGAAGGGTTAAACAAGGATTTTAAGAAAATGTTGATTGAAAACGCTGAGTTCAGGGCATTGTCTTTGAGGGAAATTCTCCCTTCATGTGATGGAACGAGGAAGATTTTGTTCAATCTGGAAGATGGCCTGATAATAGAAACTGTTGTTATACCTTGCGATAGGGGCAGGACCACTGTTTGCGTTTCAAGTCAAGTGGGTTGTGCCATGAACTGTCAATTCTGCTACACCGGCAGGATGGGCCTAAAGAGACACCTGACTGCTGCTGAGATAGTAGAACAGGCAGTTTTTGCAAGGCGTTTGCTTACCAGTGAAGTGGGTTTAATTACTAATGTTGTGTTTATGGGAATGGGAGAGCCACTTCACAACATTGACAATGTCATTAAAGCTGTAAATATAATGGTTCATGAACAAGGACTTCATTTCAGTCCACGCAAGGTCACTGTTTCAACCAGTGGACTTGTTCCCCAGCTGAAACGTTTCCTGAATGAATGTAACTGTGCTTTAGCTGTTAGTTTGAATGCAACTACTGATGAGGTTAGGAATTGGATCATGCCAATAAACCGAAAGTATAAGTTAGGCTTGCTTCTTCAAACTTTACGGGAGGAACTTCGTTGCAAGCACAAGTACAAGGTTCTTTTTGAATATGTGATGCTTGCTGGGGTTAATGATAGCATTGAAGATGCAAAGAGGATCGTTGATCTTGTCCAGGGTATTCCATGCAAGATTAACCTTATTTCATTTAATCCACATTGTGGATCTCAATTTAGACCTACCTGTAAGGAGAAGATGATTGGGTTTCGAAATGTTTTGGCTGAAGCCGGGTTGACTGTTTTCTTGCGACTAAGTAGAGGTGATGACCAGATGGCTGCGTGTGGTCAGTTAGGCAAACCCGGTATTGTTCAAGCTCCTTTACTTCGTGTGCCAGATCGATTTCAAATGGCAATGAAATTATGTCTCTAG

Coding sequence (CDS)

ATGGCCGCTTGCTGTTCCTGGAAAACCATACCAATTTCCTCCTCTTCCGCTCGAGGTCTTCTTCACCGTTCCTCCTCTTCTCCCTCTGCATCTCATTTTGTGTCCAATCCTACTATGTCTGGCGGACTTCCTTCTGCAAAGCCGCCCGCATCTTCCCGCTTCTCTGTTCATAGGTTAACCAACTTCAGGCTTCCAGTGGAGTTAGCAAGCATGCAGTCTCTAATGCCATTGCGCAGTGTTACTGCTTCTCCCTTGTTTACTTCGTTGCTTTCCTTCCACAACAACAGTTGGGGTTGTCTATCTAAAGCTATGCCTGAGGAAAAAGAAATCTTGAACGCTGATTTCAACTCCAAGATGCTTCTAAAGGGCCTGTCTTACACCGAACTTGAGAAATGGGTTCAAGCTCAAGGATACAGACCTGGCCAAGCTTTAATGCTGTGGAAACGTCTTTATGGGGATAACATTTGGGCACATACCGGTGATGAATTAGAAGGGTTAAACAAGGATTTTAAGAAAATGTTGATTGAAAACGCTGAGTTCAGGGCATTGTCTTTGAGGGAAATTCTCCCTTCATGTGATGGAACGAGGAAGATTTTGTTCAATCTGGAAGATGGCCTGATAATAGAAACTGTTGTTATACCTTGCGATAGGGGCAGGACCACTGTTTGCGTTTCAAGTCAAGTGGGTTGTGCCATGAACTGTCAATTCTGCTACACCGGCAGGATGGGCCTAAAGAGACACCTGACTGCTGCTGAGATAGTAGAACAGGCAGTTTTTGCAAGGCGTTTGCTTACCAGTGAAGTGGGTTTAATTACTAATGTTGTGTTTATGGGAATGGGAGAGCCACTTCACAACATTGACAATGTCATTAAAGCTGTAAATATAATGGTTCATGAACAAGGACTTCATTTCAGTCCACGCAAGGTCACTGTTTCAACCAGTGGACTTGTTCCCCAGCTGAAACGTTTCCTGAATGAATGTAACTGTGCTTTAGCTGTTAGTTTGAATGCAACTACTGATGAGGTTAGGAATTGGATCATGCCAATAAACCGAAAGTATAAGTTAGGCTTGCTTCTTCAAACTTTACGGGAGGAACTTCGTTGCAAGCACAAGTACAAGGTTCTTTTTGAATATGTGATGCTTGCTGGGGTTAATGATAGCATTGAAGATGCAAAGAGGATCGTTGATCTTGTCCAGGGTATTCCATGCAAGATTAACCTTATTTCATTTAATCCACATTGTGGATCTCAATTTAGACCTACCTGTAAGGAGAAGATGATTGGGTTTCGAAATGTTTTGGCTGAAGCCGGGTTGACTGTTTTCTTGCGACTAAGTAGAGGTGATGACCAGATGGCTGCGTGTGGTCAGTTAGGCAAACCCGGTATTGTTCAAGCTCCTTTACTTCGTGTGCCAGATCGATTTCAAATGGCAATGAAATTATGTCTCTAG

Protein sequence

MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLTNFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKLCL

Homology

[Close]

BLAST of CsaV3_4G037870 vs. NCBI nr
Match: XP_004145570.1 (PREDICTED: uncharacterized protein LOC101210124 [Cucumis sativus] >KGN55566.1 hypothetical protein Csa_4G667190 [Cucumis sativus])

HSP 1 Score: 971.5 bits (2510), Expect = 1.1e-279
Identity = 482/482 (100.00%), Postives = 482/482 (100.00%), Query Frame = 0


Query: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60
           MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT
Sbjct: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60

Query: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120
           NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML
Sbjct: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120

Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF
Sbjct: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
           RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG
Sbjct: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
           RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ
Sbjct: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ
Sbjct: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360

Query: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
           TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP
Sbjct: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480
           TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL
Sbjct: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480

Query: 481 CL 483
           CL
Sbjct: 481 CL 482

[Close]

BLAST of CsaV3_4G037870 vs. NCBI nr
Match: XP_008453050.1 (PREDICTED: dual-specificity RNA methyltransferase RlmN isoform X1 [Cucumis melo])

HSP 1 Score: 930.6 bits (2404), Expect = 2.1e-267
Identity = 465/481 (96.67%), Postives = 470/481 (97.71%), Query Frame = 0


Query: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60
           MAACCSWKTIPISSSSAR LLHR SSSPSASHFVS PTMSGGL SA+P ASSRFSV RLT
Sbjct: 1   MAACCSWKTIPISSSSARALLHRPSSSPSASHFVSIPTMSGGLHSARPAASSRFSVQRLT 60

Query: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120
           NF LPVELASMQSLMPLRSVTAS LFTSLLSFHNNS  CLSKAMPEEKEILN+DFNSKML
Sbjct: 61  NFSLPVELASMQSLMPLRSVTASALFTSLLSFHNNSRRCLSKAMPEEKEILNSDFNSKML 120

Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENA+F
Sbjct: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAKF 180

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
           RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG
Sbjct: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
           RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKA NIMVHEQ
Sbjct: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAANIMVHEQ 300

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ
Sbjct: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360

Query: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
           TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP
Sbjct: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480
           TCKEKMIGFRNVLAE+GLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAM+L
Sbjct: 421 TCKEKMIGFRNVLAESGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMEL 480

Query: 481 C 482
           C
Sbjct: 481 C 481

[Close]

BLAST of CsaV3_4G037870 vs. NCBI nr
Match: XP_022996536.1 (uncharacterized protein LOC111491756 isoform X2 [Cucurbita maxima] >XP_023546953.1 uncharacterized protein LOC111805899 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 870.5 bits (2248), Expect = 2.6e-249
Identity = 437/480 (91.04%), Postives = 453/480 (94.38%), Query Frame = 0


Query: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60
           MAAC +WKT+ ISSSSAR LL RSSSSPSASH VS PTMS  LPSAKP ASSRFSV +LT
Sbjct: 1   MAACSTWKTLRISSSSARTLLQRSSSSPSASHLVSKPTMSAPLPSAKPSASSRFSVPKLT 60

Query: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120
           NFRLPVEL+S+QSLMPL S TAS LFTSLLS HNNSWGCLS+AMPE+KEIL+ D  SKML
Sbjct: 61  NFRLPVELSSVQSLMPLHSATASALFTSLLSLHNNSWGCLSEAMPEKKEILHTD--SKML 120

Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           LKGLSYTELEKWV+A+GYRPGQALMLWKRLYGDN+WAH+GDELEGLNKDFKKMLIE AEF
Sbjct: 121 LKGLSYTELEKWVKARGYRPGQALMLWKRLYGDNVWAHSGDELEGLNKDFKKMLIEKAEF 180

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
           RALSLREILPS DGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG
Sbjct: 181 RALSLREILPSSDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
           RMGLKRHLTAAEIVEQAVFARRLLT EVGLITNVVFMGMGEPLHNIDNVIKA NIMV EQ
Sbjct: 241 RMGLKRHLTAAEIVEQAVFARRLLTCEVGLITNVVFMGMGEPLHNIDNVIKAANIMVDEQ 300

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           GLHFSPRKVTVSTSGLVPQLKRFL++CNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ
Sbjct: 301 GLHFSPRKVTVSTSGLVPQLKRFLHDCNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360

Query: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
           TLREELRCKH YKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP
Sbjct: 361 TLREELRCKHNYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480
           TCKEKMI FRNVLA AGLTV LRLSRGDDQMAACGQLGKPG +QAPLLRVPD+FQMAMKL
Sbjct: 421 TCKEKMIEFRNVLAAAGLTVLLRLSRGDDQMAACGQLGKPGTIQAPLLRVPDQFQMAMKL 478

[Close]

BLAST of CsaV3_4G037870 vs. NCBI nr
Match: XP_008453051.1 (PREDICTED: dual-specificity RNA methyltransferase RlmN isoform X2 [Cucumis melo])

HSP 1 Score: 819.7 bits (2116), Expect = 5.2e-234
Identity = 403/411 (98.05%), Postives = 407/411 (99.03%), Query Frame = 0


Query: 71  MQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKMLLKGLSYTELE 130
           MQSLMPLRSVTAS LFTSLLSFHNNS  CLSKAMPEEKEILN+DFNSKMLLKGLSYTELE
Sbjct: 1   MQSLMPLRSVTASALFTSLLSFHNNSRRCLSKAMPEEKEILNSDFNSKMLLKGLSYTELE 60

Query: 131 KWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEFRALSLREILP 190
           KWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENA+FRALSLREILP
Sbjct: 61  KWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAKFRALSLREILP 120

Query: 191 SCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTA 250
           SCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTA
Sbjct: 121 SCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTA 180

Query: 251 AEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQGLHFSPRKVT 310
           AEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKA NIMVHEQGLHFSPRKVT
Sbjct: 181 AEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAANIMVHEQGLHFSPRKVT 240

Query: 311 VSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKH 370
           VSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKH
Sbjct: 241 VSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKH 300

Query: 371 KYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFR 430
           KYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFR
Sbjct: 301 KYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFR 360

Query: 431 NVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKLC 482
           NVLAE+GLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAM+LC
Sbjct: 361 NVLAESGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMELC 411

[Close]

BLAST of CsaV3_4G037870 vs. NCBI nr
Match: XP_023546952.1 (uncharacterized protein LOC111805899 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 721.1 bits (1860), Expect = 2.5e-204
Identity = 373/451 (82.71%), Postives = 393/451 (87.14%), Query Frame = 0


Query: 33  FVSNPTMSGGLPSAKPPASSRFSVHRLTNFRL--PVELASMQSLMPLRSVTASPLF-TSL 92
           F   P+M+  +      A S F    + + RL  P+ L S  S    R  TAS    T L
Sbjct: 5   FFPKPSMASSI-----LAPSHFYSLSIPSARLCPPLHLISFLSSAGRRFTTASSASPTPL 64

Query: 93  LSFHNNSWGCLSKAMPEEKEILNADFNSKMLLKGLSYTELEKWVQAQGYRPGQALMLWKR 152
            +  ++S      +MPE+KEIL+ D  SKMLLKGLSYTELEKWV+A+GYRPGQALMLWKR
Sbjct: 65  FALDDSS---PDFSMPEKKEILHTD--SKMLLKGLSYTELEKWVKARGYRPGQALMLWKR 124

Query: 153 LYGDNIWAHTGDELEGLNKDFKKMLIENAEFRALSLREILPSCDGTRKILFNLEDGLIIE 212
           LYGDN+WAH+GDELEGLNKDFKKMLIE AEFRALSLREILPS DGTRKILFNLEDGLIIE
Sbjct: 125 LYGDNVWAHSGDELEGLNKDFKKMLIEKAEFRALSLREILPSSDGTRKILFNLEDGLIIE 184

Query: 213 TVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVG 272
           TVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLT EVG
Sbjct: 185 TVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTCEVG 244

Query: 273 LITNVVFMGMGEPLHNIDNVIKAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNC 332
           LITNVVFMGMGEPLHNIDNVIKA NIMV EQGLHFSPRKVTVSTSGLVPQLKRFL++CNC
Sbjct: 245 LITNVVFMGMGEPLHNIDNVIKAANIMVDEQGLHFSPRKVTVSTSGLVPQLKRFLHDCNC 304

Query: 333 ALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKHKYKVLFEYVMLAGVNDSIE 392
           ALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKH YKVLFEYVMLAGVNDSIE
Sbjct: 305 ALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKHNYKVLFEYVMLAGVNDSIE 364

Query: 393 DAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDD 452
           DAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMI FRNVLA AGLTV LRLSRGDD
Sbjct: 365 DAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIEFRNVLAAAGLTVLLRLSRGDD 424

Query: 453 QMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 481
           QMAACGQLGKPG +QAPLLRVPD+FQMAMKL
Sbjct: 425 QMAACGQLGKPGTIQAPLLRVPDQFQMAMKL 445

[Close]

BLAST of CsaV3_4G037870 vs. TAIR10
Match: AT1G60230.1 (Radical SAM superfamily protein)

HSP 1 Score: 596.7 bits (1537), Expect = 1.3e-170
Identity = 298/427 (69.79%), Postives = 343/427 (80.33%), Query Frame = 0


Query: 69  ASMQSLMPLRSVTASPLFTSLLSFHNN---SWGCLSKA-------------MPEEKEILN 128
           A+    + L S   S   T+ + FH +   S+ C S +              P  K  + 
Sbjct: 29  AAFPGTLTLPSPLLSDRLTNSILFHESRSLSFSCFSSSSXSSAAYLPSLEEYPSAKGSVK 88

Query: 129 ADFNSKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKK 188
            D N K++LKG++Y  L++WVQ+ G+RPGQALMLWKRLY DNIWA+  DELEGLNKD K+
Sbjct: 89  RDDNQKVVLKGMTYASLQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKR 148

Query: 189 MLIENAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAM 248
           M+ E+AEF ALS ++I  + DGTRKILF L+DGL+IETVVIPCDRGRTTVCVSSQVGCAM
Sbjct: 149 MISEHAEFGALSFKDIRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAM 208

Query: 249 NCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKA 308
           NCQFCYTGRMGLKR+LT AEIVEQAV+ARRLL+ EVG ITNVVFMGMGEP HNIDNVIKA
Sbjct: 209 NCQFCYTGRMGLKRNLTTAEIVEQAVYARRLLSHEVGSITNVVFMGMGEPFHNIDNVIKA 268

Query: 309 VNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRK 368
            NIMV E GLHFSPRKVTVSTSGLVPQLKRFL E NCALAVSLNATTDEVRNWIMPINRK
Sbjct: 269 ANIMVDENGLHFSPRKVTVSTSGLVPQLKRFLRESNCALAVSLNATTDEVRNWIMPINRK 328

Query: 369 YKLGLLLQTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNP 428
           YKL LLL+TLRE L  +HKYKVLFEYVMLAGVNDS++DA+R+V+LVQGIPCKINLI FNP
Sbjct: 329 YKLSLLLETLREGLSSRHKYKVLFEYVMLAGVNDSMDDARRLVELVQGIPCKINLIQFNP 388

Query: 429 HCGSQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPD 480
           H GSQF  T ++KMI FRNVLAE G TV +R SRG+DQMAACGQLG  G VQAP++RVP+
Sbjct: 389 HSGSQFIQTEEDKMIKFRNVLAEGGCTVLMRFSRGNDQMAACGQLGMIGAVQAPVMRVPE 448

[Close]

BLAST of CsaV3_4G037870 vs. TAIR10
Match: AT3G19630.1 (Radical SAM superfamily protein)

HSP 1 Score: 189.9 bits (481), Expect = 3.7e-48
Identity = 126/361 (34.90%), Postives = 189/361 (52.35%), Query Frame = 0


Query: 127 TELEKWVQAQGYRPGQALMLWKRLY--GDNIWAHTGDELEGLNKDFKKMLIENAEFRALS 186
           +E++   ++ G  P  A+ +WK +    D +W    DE+  L      +L    +     
Sbjct: 10  SEIKSEFESAGINPKFAIQIWKYVIQNPDCVW----DEIPSLPSAAYSLLHSKFKTXXXX 69

Query: 187 LREILPSCDG-TRKILFNLEDGLIIETVVIPCDRG-------------RTTVCVSSQVGC 246
                   DG T K+L  L++G  +E VV+  D               R+T+C+SSQVGC
Sbjct: 70  XXXXXXXSDGTTSKLLIKLQNGAFVEAVVMRYDTRLGMLGGKPRPGGIRSTLCISSQVGC 129

Query: 247 AMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVI 306
            M C FC TG MG K +LT+ EIVEQ V A R+       I N+VFMGMGEPL+N + V+
Sbjct: 130 KMGCTFCATGTMGFKSNLTSGEIVEQLVHASRIAD-----IRNIVFMGMGEPLNNYNAVV 189

Query: 307 KAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFLNEC-NCALAVSLNATTDEVRNWIMPI 366
           +AV +M++ Q    SP+++T+ST G+V  + +  N+    +LAVSL+A   E+R  IMP 
Sbjct: 190 EAVRVMLN-QPFQLSPKRITISTVGIVHAINKLHNDLPGVSLAVSLHAPVQEIRCQIMPA 249

Query: 367 NRKYKLGLLLQTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLIS 426
            R + L  L+  L +  +   + K+  EY+ML GVND  + A  + +L++     INLI 
Sbjct: 250 ARAFPLQKLMDAL-QTFQKNSQQKIFIEYIMLDGVNDQEQHAHLLGELLKTFQVVINLIP 309

Query: 427 FNP-HCGSQFRPTCKEKMIGFRNVLAEA-GLTVFLRLSRGDDQMAACGQL--GKPGIVQA 467
           FNP    SQF  +  + +  F+ +L E   +   +R   G D   ACGQL   +P I + 
Sbjct: 310 FNPIGSTSQFETSSIQGVSRFQKILRETYKIRTTIRKEMGQDISGACGQLVVNQPDIKKT 359

[Close]

BLAST of CsaV3_4G037870 vs. TAIR10
Match: AT2G39670.2 (Radical SAM superfamily protein)

HSP 1 Score: 184.5 bits (467), Expect = 1.6e-46
Identity = 125/369 (33.88%), Postives = 201/369 (54.47%), Query Frame = 0


Query: 120 LLKGLSYTELEK------WVQAQGYRPGQA-LMLWKRLYGDNIWAHTGDELEGLNKDFKK 179
           +L G+S  EL++       +  +GYR  Q   +++KR        +  ++   L   F+K
Sbjct: 63  VLIGMSEPELQELAINLVLIFQEGYRGKQLHHLIYKRK------VNKVEDFSNLPLTFRK 122

Query: 180 MLIENA-EFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPC---DRG--RTTVCVSS 239
            L++   +     + + + + DGT K+L  LED L+IETV IP    ++G  R T CVSS
Sbjct: 123 GLVDGGFKVGRSPIYQTVTATDGTIKLLLKLEDNLLIETVGIPVQDDEKGITRLTACVSS 182

Query: 240 QVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNI 299
           QVGC + C FC TG+ G  R+L   EI+EQ +    +    V   TNVVFMGMGEP+ N+
Sbjct: 183 QVGCPLRCSFCATGKGGFSRNLQRHEIIEQVLAIEDVFKHRV---TNVVFMGMGEPMLNL 242

Query: 300 DNVIKAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFL-NECNCALAVSLNATTDEVRNW 359
            +V+ A   +   + +    R +T+ST G+   +K+   ++    LAVSL+A    +R  
Sbjct: 243 KSVLDAHRCL--NKDIEIGQRMITISTVGVPNTIKKLASHKLQSTLAVSLHAPNQSLREK 302

Query: 360 IMPINRKYKLGLLLQTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQ--GIPC 419
           I+P  + Y L  +++  R+  +  ++ +V FEY +LAGVND +E A  + +L++  G   
Sbjct: 303 IVPSAKAYPLEAIMKDCRDYFQETNR-RVSFEYALLAGVNDQVEHAVELAELLREWGKTY 362

Query: 420 KINLISFNPHCGSQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIV 473
            +NLI +NP  GS+++   K+ ++ F   L    +T  +R +RG D  AACGQL +    
Sbjct: 363 HVNLIPYNPIEGSEYQRPYKKAVLAFAAALESRKITASVRQTRGLDASAACGQL-RNKFQ 418

[Close]

BLAST of CsaV3_4G037870 vs. TAIR10
Match: AT1G70350.1 (unknown protein)

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-10
Identity = 47/102 (46.08%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60
           MAA    + +  SSSS + L  RSS++ SAS    +  ++ G  S+   +S+R S+ RLT
Sbjct: 1   MAANGVRRALQASSSSGKILFGRSSAATSASKIGKSAGIAFGNGSS---SSTRPSLRRLT 60

Query: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSK 103
             R+PVEL++  SL+PL SVTAS L TSLLS  N +W CLS+
Sbjct: 61  FSRVPVELSAGISLIPLHSVTASALLTSLLSLSNQNWSCLSE 99

[Close]

BLAST of CsaV3_4G037870 vs. Swiss-Prot
Match: sp|Q74E53|RLMN_GEOSL (Dual-specificity RNA methyltransferase RlmN OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=rlmN PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.6e-77
Identity = 162/337 (48.07%), Postives = 215/337 (63.80%), Query Frame = 0


Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           +KGLS  ELE+++  +G    +A  ++K LY     A +  E+  L K+ ++ L E A  
Sbjct: 7   IKGLSIDELERFLLGKGKERYRARQIFKWLYQRG--ATSFAEMTDLAKELRRDLEETARI 66

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
             LS   +  S DGTRK LF L+DG  +E+V+IP +  R T+C+SSQVGCAM C+FC TG
Sbjct: 67  STLSPEALEISRDGTRKYLFRLDDGCSVESVLIP-EEDRNTLCISSQVGCAMACEFCLTG 126

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
              L R+LT AEIV Q    +R +      + N+VFMGMGEPL N+DNVI+A+ IM+H+ 
Sbjct: 127 TFRLTRNLTTAEIVNQVCAVQRDVP-----VRNIVFMGMGEPLANLDNVIRALQIMLHDD 186

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           GL FS R++TVST+GLVP+++R        LAVSLNATTDE+R+ IMPINRKY L +LL 
Sbjct: 187 GLQFSTRRITVSTAGLVPEMERLGRSVTVNLAVSLNATTDELRDRIMPINRKYPLAVLLD 246

Query: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
             R       + K+  EYV+L GVND+++DAKR+V L+  IP KINLI FN H G  FR 
Sbjct: 247 ACR-RFPLPGRRKITIEYVLLGGVNDTLDDAKRLVRLLSDIPSKINLIPFNEHEGCSFRS 306

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQL 458
             ++ +  F   L +   TV  R SRG D  AACGQL
Sbjct: 307 PSQDAIDRFHRYLLDKHFTVITRSSRGADISAACGQL 334

[Close]

BLAST of CsaV3_4G037870 vs. Swiss-Prot
Match: sp|Q39S71|RLMN_GEOMG (Dual-specificity RNA methyltransferase RlmN OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) OX=269799 GN=rlmN PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.3e-76
Identity = 164/342 (47.95%), Postives = 215/342 (62.87%), Query Frame = 0


Query: 116 NSKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLI 175
           N K+ +K L+  +L  ++  +G    +A  ++K LY  +  A +  E+  L KD ++ L 
Sbjct: 3   NGKIDIKNLTLDDLIAFLAGKGKERYRARQIFKWLYQKD--ARSFAEMTDLAKDLRRDLE 62

Query: 176 ENAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQ 235
           E A    L    +  S DGTRK LF LEDG  +E+V+IP +  RTT+C+SSQVGCAM C+
Sbjct: 63  ETAVISDLEPEAMEVSRDGTRKYLFRLEDGNTVESVLIP-EEDRTTLCISSQVGCAMACE 122

Query: 236 FCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNI 295
           FC TG   L R+LTA EIV Q    RR +      + N+VFMGMGEPL N+DNV+KA+ I
Sbjct: 123 FCLTGTFRLTRNLTAGEIVNQICAVRRDVP-----VRNIVFMGMGEPLANLDNVVKALKI 182

Query: 296 MVHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKL 355
           ++H+ GL FS R+VTVSTSGLVP+++R   E    LAVSLNATTDEVR+ IMP+NR+Y L
Sbjct: 183 ILHDDGLQFSTRRVTVSTSGLVPEMERLGREVTVNLAVSLNATTDEVRDRIMPVNRRYPL 242

Query: 356 GLLLQTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCG 415
            LLL   R       + K+  EYVM+ G+NDS+EDAKR+V L+  I  KINLI FN H G
Sbjct: 243 RLLLDACR-SYPLPGRRKITIEYVMIKGLNDSLEDAKRLVKLLSDISSKINLIPFNEHDG 302

Query: 416 SQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQL 458
             F+   +  +  F + L     TV  R SRG D  AACGQL
Sbjct: 303 CSFKSPDQGAIDVFHSYLLSKHFTVITRSSRGSDISAACGQL 335

[Close]

BLAST of CsaV3_4G037870 vs. Swiss-Prot
Match: sp|A1AL40|RLMN_PELPD (Dual-specificity RNA methyltransferase RlmN OS=Pelobacter propionicus (strain DSM 2379 / NBRC 103807 / OttBd1) OX=338966 GN=rlmN PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 5.8e-75
Identity = 165/348 (47.41%), Postives = 214/348 (61.49%), Query Frame = 0


Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           LK L+   LE++++ QG    +A  ++K +Y  +  A +  E+  ++KD +  L   A  
Sbjct: 7   LKNLTLPALEQFLRGQGKERFRATQVFKWIYQHD--ARSFQEMTNISKDLRAELEAKAYI 66

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
             L    +    DGTRK LF LEDG  +E+V+IP D GR T+C+SSQVGCAM C FC TG
Sbjct: 67  SNLEPEAVEVGGDGTRKYLFGLEDGNSVESVLIP-DEGRNTLCISSQVGCAMGCAFCLTG 126

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
              L R+LT AEIV Q +  RR +      I N+V MGMGEPLHN+DNVI A++IM+   
Sbjct: 127 TFRLTRNLTTAEIVNQIMAVRRDVE-----IRNIVMMGMGEPLHNLDNVIPAIHIMIDGN 186

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNEC-NCALAVSLNATTDEVRNWIMPINRKYKLGLLL 360
           GL  S R+VTVST GL P+++R   E  N  LAVSLNATTDE+R+ IMPINR+Y L  LL
Sbjct: 187 GLQLSNRRVTVSTCGLAPEMERLGRELPNVNLAVSLNATTDELRDRIMPINRRYPLKELL 246

Query: 361 QTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFR 420
              R E     + KV FEYVML G+ND++EDAKR++ L   IP K+NLI FN   G +FR
Sbjct: 247 SACR-EFPLPGRRKVTFEYVMLGGLNDTLEDAKRLLRLTSDIPNKVNLIPFNEFQGCEFR 306

Query: 421 PTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQL-GKPGIVQAP 467
              +  +  F   L +  +TV  R SRG D  AACGQL GK    + P
Sbjct: 307 SPTRAAIDAFHKYLIDRHVTVITRDSRGSDISAACGQLKGKLDAARQP 345

[Close]

BLAST of CsaV3_4G037870 vs. Swiss-Prot
Match: sp|A0LQM1|RLMN_SYNFM (Dual-specificity RNA methyltransferase RlmN OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) OX=335543 GN=rlmN PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 7.5e-75
Identity = 152/337 (45.10%), Postives = 218/337 (64.69%), Query Frame = 0


Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           +K  +  ELE+WVQ  G R  +A  L++ +YG  +   +  E   L++ F+  L    E 
Sbjct: 6   VKDFTLPELEEWVQGIGERSFRARQLFRHVYGRGV--RSWSECSDLSRMFRVQLEHGVEL 65

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
            ALS+ +   + DGT K LF L DG  IE V+IP D  R+T+CVSSQVGCA+ C+FC TG
Sbjct: 66  DALSVLKKEQADDGTSKYLFGLRDGHSIEAVLIP-DLPRSTLCVSSQVGCALGCKFCLTG 125

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
            +G KR+L+AAEIV+Q    +R L S    ITN+VFMGMGEPL N+D+V++A+ ++    
Sbjct: 126 SLGFKRNLSAAEIVDQVCQVQRDLGSR-SRITNIVFMGMGEPLANLDSVLRAIRVIAEPN 185

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           G+ FS R++T+ST+GLVPQL+R   E    LAVSL+A  +E+R  +MP+NR Y L +L+ 
Sbjct: 186 GMAFSHRRITLSTAGLVPQLRRLGRESPVNLAVSLHAAENELRAELMPVNRTYPLEVLMA 245

Query: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
             RE      K ++ FEY++L G+ND  + AK++V L+ GI  K+NL+ FNPH GS FR 
Sbjct: 246 ACREYPLPPRK-RITFEYILLDGINDDPKQAKQLVKLLHGIRAKVNLMPFNPHPGSVFRK 305

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQL 458
             +++++ F+  L  A +T  +R SRG +  AACGQL
Sbjct: 306 PSEQRVLAFQEALQNARITTHVRRSRGGEIGAACGQL 337

[Close]

BLAST of CsaV3_4G037870 vs. Swiss-Prot
Match: sp|Q3A2Z4|RLMN_PELCD (Dual-specificity RNA methyltransferase RlmN OS=Pelobacter carbinolicus (strain DSM 2380 / NBRC 103641 / GraBd1) OX=338963 GN=rlmN PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 3.7e-74
Identity = 154/351 (43.87%), Postives = 215/351 (61.25%), Query Frame = 0


Query: 111 LNADFNSKMLLKGLSYTELEKWVQAQG---YRPGQAL-MLWKRLYGDNIWAHTGDELEGL 170
           ++ D ++++ LK  +  EL +++   G   +R GQ +  ++ RL  D       D +  L
Sbjct: 3   VSMDQDTRIDLKNFTLEELTEFLAGMGKERFRAGQVMRWMYHRLVDD------FDAMSDL 62

Query: 171 NKDFKKMLIENAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSS 230
           +K  +  L + A    L+      S DGTRK LF LEDG  IE+V IP D  R T+C+S+
Sbjct: 63  SKVLRAELHQRARISRLTPEATEDSRDGTRKYLFRLEDGETIESVRIPMDDNRATLCIST 122

Query: 231 QVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNI 290
           QVGCAM C FC+TG  GL R+LT  EIV Q   A        G + N+V MGMGEPLHN+
Sbjct: 123 QVGCAMGCVFCHTGSFGLVRNLTPGEIVNQVCAA-----LADGPVNNIVLMGMGEPLHNL 182

Query: 291 DNVIKAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWI 350
           DNV+KA+ I+   QGL +SPRKVT+ST+GLVPQ++         LAVSLNATTDEVRN +
Sbjct: 183 DNVVKALQILYMPQGLDYSPRKVTLSTAGLVPQMQELGKRVRVNLAVSLNATTDEVRNRL 242

Query: 351 MPINRKYKLGLLLQTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKIN 410
           MP+N++Y L  L+   R +     K ++ FEY+++  VNDS +DA+R+V L+ GI  K+N
Sbjct: 243 MPVNQRYPLQQLMAACR-QYPLHAKKRITFEYILIRDVNDSDQDARRLVKLLHGIKAKVN 302

Query: 411 LISFNPHCGSQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQL 458
           +I FN H  S+FR   +E++  F+  L + G+    R S+G D  AACGQL
Sbjct: 303 IIPFNEHSASEFRAPTEERISRFQGYLLDHGMVAIRRASKGQDISAACGQL 341

[Close]

BLAST of CsaV3_4G037870 vs. TrEMBL
Match: tr|A0A0A0L605|A0A0A0L605_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G667190 PE=4 SV=1)

HSP 1 Score: 971.5 bits (2510), Expect = 7.1e-280
Identity = 482/482 (100.00%), Postives = 482/482 (100.00%), Query Frame = 0


Query: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60
           MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT
Sbjct: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60

Query: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120
           NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML
Sbjct: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120

Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF
Sbjct: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
           RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG
Sbjct: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
           RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ
Sbjct: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ
Sbjct: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360

Query: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
           TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP
Sbjct: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480
           TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL
Sbjct: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480

Query: 481 CL 483
           CL
Sbjct: 481 CL 482

[Close]

BLAST of CsaV3_4G037870 vs. TrEMBL
Match: tr|A0A1S3BVB5|A0A1S3BVB5_CUCME (dual-specificity RNA methyltransferase RlmN isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493873 PE=4 SV=1)

HSP 1 Score: 930.6 bits (2404), Expect = 1.4e-267
Identity = 465/481 (96.67%), Postives = 470/481 (97.71%), Query Frame = 0


Query: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60
           MAACCSWKTIPISSSSAR LLHR SSSPSASHFVS PTMSGGL SA+P ASSRFSV RLT
Sbjct: 1   MAACCSWKTIPISSSSARALLHRPSSSPSASHFVSIPTMSGGLHSARPAASSRFSVQRLT 60

Query: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120
           NF LPVELASMQSLMPLRSVTAS LFTSLLSFHNNS  CLSKAMPEEKEILN+DFNSKML
Sbjct: 61  NFSLPVELASMQSLMPLRSVTASALFTSLLSFHNNSRRCLSKAMPEEKEILNSDFNSKML 120

Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENA+F
Sbjct: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAKF 180

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
           RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG
Sbjct: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
           RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKA NIMVHEQ
Sbjct: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAANIMVHEQ 300

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ
Sbjct: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360

Query: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
           TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP
Sbjct: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480
           TCKEKMIGFRNVLAE+GLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAM+L
Sbjct: 421 TCKEKMIGFRNVLAESGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMEL 480

Query: 481 C 482
           C
Sbjct: 481 C 481

[Close]

BLAST of CsaV3_4G037870 vs. TrEMBL
Match: tr|A0A1S3BV96|A0A1S3BV96_CUCME (dual-specificity RNA methyltransferase RlmN isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493873 PE=4 SV=1)

HSP 1 Score: 819.7 bits (2116), Expect = 3.5e-234
Identity = 403/411 (98.05%), Postives = 407/411 (99.03%), Query Frame = 0


Query: 71  MQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKMLLKGLSYTELE 130
           MQSLMPLRSVTAS LFTSLLSFHNNS  CLSKAMPEEKEILN+DFNSKMLLKGLSYTELE
Sbjct: 1   MQSLMPLRSVTASALFTSLLSFHNNSRRCLSKAMPEEKEILNSDFNSKMLLKGLSYTELE 60

Query: 131 KWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEFRALSLREILP 190
           KWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENA+FRALSLREILP
Sbjct: 61  KWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAKFRALSLREILP 120

Query: 191 SCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTA 250
           SCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTA
Sbjct: 121 SCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTA 180

Query: 251 AEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQGLHFSPRKVT 310
           AEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKA NIMVHEQGLHFSPRKVT
Sbjct: 181 AEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAANIMVHEQGLHFSPRKVT 240

Query: 311 VSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKH 370
           VSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKH
Sbjct: 241 VSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKH 300

Query: 371 KYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFR 430
           KYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFR
Sbjct: 301 KYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFR 360

Query: 431 NVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKLC 482
           NVLAE+GLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAM+LC
Sbjct: 361 NVLAESGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMELC 411

[Close]

BLAST of CsaV3_4G037870 vs. TrEMBL
Match: tr|A0A2I4E6R7|A0A2I4E6R7_9ROSI (uncharacterized protein LOC108986784 OS=Juglans regia OX=51240 GN=LOC108986784 PE=4 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.1e-182
Identity = 315/364 (86.54%), Postives = 337/364 (92.58%), Query Frame = 0


Query: 117 SKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIE 176
           SK+LLKG+ Y+ELE WVQ QGYRPGQALMLWKRLYG+NIWAH  DELEGLNKDFKKML E
Sbjct: 86  SKVLLKGMKYSELENWVQLQGYRPGQALMLWKRLYGNNIWAHHIDELEGLNKDFKKMLCE 145

Query: 177 NAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQF 236
           NAEF+ LSL+EIL +CDGTRKILF LED L+IETVVIPCDRGRTTVCVSSQVGCAMNCQF
Sbjct: 146 NAEFKVLSLKEILTACDGTRKILFTLEDDLVIETVVIPCDRGRTTVCVSSQVGCAMNCQF 205

Query: 237 CYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIM 296
           CYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVG ITNVVFMGMGEPLHNIDNVIKA  IM
Sbjct: 206 CYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGSITNVVFMGMGEPLHNIDNVIKAAEIM 265

Query: 297 VHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLG 356
           VH+QGL+FSPRKVTVSTSGLVPQL+RFL E NCALAVSLNATTDEVRNWIMPINRKYKLG
Sbjct: 266 VHDQGLYFSPRKVTVSTSGLVPQLRRFLRESNCALAVSLNATTDEVRNWIMPINRKYKLG 325

Query: 357 LLLQTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGS 416
           LLLQTL+EELR KH YKVLFEYVML+GVNDSIEDAKR++DLVQ IPCKINLISFNPH GS
Sbjct: 326 LLLQTLQEELRLKHNYKVLFEYVMLSGVNDSIEDAKRLIDLVQDIPCKINLISFNPHTGS 385

Query: 417 QFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQM 476
           +FRPT + KMI FRNVLAEAG  VFLRLSRGDDQMAACGQLGKPG ++APLLRVP+ FQM
Sbjct: 386 KFRPTSEAKMIEFRNVLAEAGCIVFLRLSRGDDQMAACGQLGKPGAIKAPLLRVPEEFQM 445

Query: 477 AMKL 481
           A+ +
Sbjct: 446 AVNM 449

[Close]

BLAST of CsaV3_4G037870 vs. TrEMBL
Match: tr|A0A2P4M397|A0A2P4M397_QUESU (Dual-specificity rna methyltransferase rlmn OS=Quercus suber OX=58331 GN=CFP56_08851 PE=3 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 4.4e-181
Identity = 314/375 (83.73%), Postives = 340/375 (90.67%), Query Frame = 0


Query: 106 EEKEILNADFNSKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEG 165
           EE  +     NSK LLKGL+Y+E E WVQ QGYRPGQALMLWKRLYG++IWAH  DELEG
Sbjct: 70  EEIGVSKNGSNSKTLLKGLTYSEFENWVQLQGYRPGQALMLWKRLYGNDIWAHQIDELEG 129

Query: 166 LNKDFKKMLIENAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVS 225
           LNKDFKKML ENAEF+ALSL+EIL + DGT+KILF LEDG +IETVVIPCDRGRTTVCVS
Sbjct: 130 LNKDFKKMLSENAEFKALSLKEILTASDGTKKILFTLEDGQVIETVVIPCDRGRTTVCVS 189

Query: 226 SQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHN 285
           SQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVG ITNVVFMGMGEPLHN
Sbjct: 190 SQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGSITNVVFMGMGEPLHN 249

Query: 286 IDNVIKAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNW 345
           IDNVIKA +IMVH+QGLHFSPRKVTVSTSGLVPQL+RFL+E NCALAVSLNATTDEVRNW
Sbjct: 250 IDNVIKAADIMVHDQGLHFSPRKVTVSTSGLVPQLRRFLHESNCALAVSLNATTDEVRNW 309

Query: 346 IMPINRKYKLGLLLQTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKI 405
           IMPINRKYKLGLLL+TLREELR K+ YKVLFEYVML+GVNDSIEDAKR++DL++GIPCKI
Sbjct: 310 IMPINRKYKLGLLLETLREELRFKNNYKVLFEYVMLSGVNDSIEDAKRLIDLIEGIPCKI 369

Query: 406 NLISFNPHCGSQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQA 465
           NLISFNPH GSQF+PT   KMI FRNVLAEAG TVFLR SRGDDQMAACGQLG PG +QA
Sbjct: 370 NLISFNPHTGSQFQPTSDAKMIEFRNVLAEAGCTVFLRPSRGDDQMAACGQLGNPGAIQA 429

Query: 466 PLLRVPDRFQMAMKL 481
           PLLRVP +FQ A+ +
Sbjct: 430 PLLRVPKQFQTALNI 444

The following BLAST results are available for this feature:

BLAST of CsaV3_4G037870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145570.1	1.1e-279	100.00	PREDICTED: uncharacterized protein LOC101210124 [Cucumis sativus] >KGN55566.1 hy...	[more]
XP_008453050.1	2.1e-267	96.67	PREDICTED: dual-specificity RNA methyltransferase RlmN isoform X1 [Cucumis melo]	[more]
XP_022996536.1	2.6e-249	91.04	uncharacterized protein LOC111491756 isoform X2 [Cucurbita maxima] >XP_023546953...	[more]
XP_008453051.1	5.2e-234	98.05	PREDICTED: dual-specificity RNA methyltransferase RlmN isoform X2 [Cucumis melo]	[more]
XP_023546952.1	2.5e-204	82.71	uncharacterized protein LOC111805899 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_4G037870 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G60230.1	1.3e-170	69.79	Radical SAM superfamily protein	[more]
AT3G19630.1	3.7e-48	34.90	Radical SAM superfamily protein	[more]
AT2G39670.2	1.6e-46	33.88	Radical SAM superfamily protein	[more]
AT1G70350.1	1.8e-10	46.08	unknown protein	[more]

BLAST of CsaV3_4G037870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q74E53\|RLMN_GEOSL	1.6e-77	48.07	Dual-specificity RNA methyltransferase RlmN OS=Geobacter sulfurreducens (strain ...	[more]
sp\|Q39S71\|RLMN_GEOMG	2.3e-76	47.95	Dual-specificity RNA methyltransferase RlmN OS=Geobacter metallireducens (strain...	[more]
sp\|A1AL40\|RLMN_PELPD	5.8e-75	47.41	Dual-specificity RNA methyltransferase RlmN OS=Pelobacter propionicus (strain DS...	[more]
sp\|A0LQM1\|RLMN_SYNFM	7.5e-75	45.10	Dual-specificity RNA methyltransferase RlmN OS=Syntrophobacter fumaroxidans (str...	[more]
sp\|Q3A2Z4\|RLMN_PELCD	3.7e-74	43.87	Dual-specificity RNA methyltransferase RlmN OS=Pelobacter carbinolicus (strain D...	[more]

BLAST of CsaV3_4G037870 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L605\|A0A0A0L605_CUCSA	7.1e-280	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G667190 PE=4 SV=1	[more]
tr\|A0A1S3BVB5\|A0A1S3BVB5_CUCME	1.4e-267	96.67	dual-specificity RNA methyltransferase RlmN isoform X1 OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A1S3BV96\|A0A1S3BV96_CUCME	3.5e-234	98.05	dual-specificity RNA methyltransferase RlmN isoform X2 OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A2I4E6R7\|A0A2I4E6R7_9ROSI	1.1e-182	86.54	uncharacterized protein LOC108986784 OS=Juglans regia OX=51240 GN=LOC108986784 P...	[more]
tr\|A0A2P4M397\|A0A2P4M397_QUESU	4.4e-181	83.73	Dual-specificity rna methyltransferase rlmn OS=Quercus suber OX=58331 GN=CFP56_0...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0006364	rRNA processing
GO:0070475	rRNA base methylation
GO:0030488	tRNA methylation

Vocabulary: **Molecular Function**
Term	Definition
GO:0008173	RNA methyltransferase activity
GO:0003824	catalytic activity
GO:0051536	iron-sulfur cluster binding

Vocabulary: **INTERPRO**
Term	Definition
IPR004383	rRNA_lsu_MTrfase_RlmN/Cfr
IPR013785	Aldolase_TIM
IPR027492	RNA_MTrfase_RlmN
IPR007197	rSAM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070475	rRNA base methylation
biological_process	GO:0030488	tRNA methylation
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0008173	RNA methyltransferase activity
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G037870.1	CsaV3_4G037870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007197	Radical SAM	PFAM	PF04055	Radical_SAM	coord: 225..390 e-value: 9.4E-18 score: 65.0
IPR007197	Radical SAM	SFLD	SFLDS00029	Radical_SAM	coord: 225..390 e-value: 8.2E-11 score: 37.1
IPR027492	Dual-specificity RNA methyltransferase RlmN	TIGRFAM	TIGR00048	TIGR00048	coord: 119..457 e-value: 1.4E-101 score: 337.9
None	No IPR available	PFAM	PF13394	Fer4_14	coord: 229..328 e-value: 1.6E-6 score: 28.1
None	No IPR available	SFLD	SFLDG01062	methyltransferase_(Class_A)	coord: 118..459 e-value: 0.0 score: 380.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..42
None	No IPR available	PANTHER	PTHR30544:SF3	SUBFAMILY NOT NAMED	coord: 80..479
None	No IPR available	CDD	cd01335	Radical_SAM	coord: 229..397 e-value: 1.67947E-8 score: 52.3357
None	No IPR available	SUPERFAMILY	SSF102114	Radical SAM enzymes	coord: 218..435
IPR013785	Aldolase-type TIM barrel	GENE3D	G3DSA:3.20.20.70		coord: 185..448 e-value: 8.0E-100 score: 335.5
IPR004383	Ribosomal RNA large subunit methyltransferase RlmN/Cfr	SFLD	SFLDF00275	adenosine_C2_methyltransferas	coord: 117..459 e-value: 0.0 score: 382.8
IPR004383	Ribosomal RNA large subunit methyltransferase RlmN/Cfr	PANTHER	PTHR30544	23S RRNA METHYLTRANSFERASE	coord: 80..479

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G037870	CSPI04G27560	Wild cucumber (PI 183967)	cpicucB212
CsaV3_4G037870	Cucsa.191670	Cucumber (Gy14) v1	cgycucB305
CsaV3_4G037870	CsGy4G025780	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G037870	MELO3C017082	Melon (DHL92) v3.5.1	cucmeB316
CsaV3_4G037870	MELO3C017082.2	Melon (DHL92) v3.6.1	cucmedB308

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G037870	Wax gourd	cucwgoB423
CsaV3_4G037870	Wax gourd	cucwgoB426
CsaV3_4G037870	Silver-seed gourd	carcucB1094
CsaV3_4G037870	Cucurbita moschata (Rifu)	cmocucB0558
CsaV3_4G037870	Cucurbita pepo (Zucchini)	cpecucB0708
CsaV3_4G037870	Cucurbita pepo (Zucchini)	cpecucB0978
CsaV3_4G037870	Watermelon (97103) v1	cucwmB370
CsaV3_4G037870	Watermelon (97103) v2	cucwmbB283