CSPI04G27560 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G27560
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Dual-specificity RNA methyltransferase RlmN
Location	Chr4 : 24164800 .. 24175580 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAAATATGATATGATTGAACGTAATATTTGATTTGATAGCCCATTATTAAGGAGGATACGCGACTTTCCGAGGGTGGTTTTACGAAAATGTCCAGGAAGATAATGAATTTGAGGGGTGGCCGTGTTTTCCACTCAATCAACACTCTTAATCGATTCGACAACGTGATAATTTCAGGGGTTTCATGGCAGTGAATAATTTTGGCTTCAAAGTTTGAAACAGAGAGCCAAGGGACTATGGCCGCTTGCTGTTCCTGGAAAACCATACCAATTTCCTCCTCTTCCGCTCGAGGTCTTCTTCACCGTTCCTCCTCTTCTCCCTCTGCATCTCATTTTGTGTCCAATCCTACTATGTCTGGCGGACTTCCTTCTGCAAAGCCGCCCGCATCTTCCCGCTTCTCTGTTCATAGGCTAACCAACTTCAGGTTGTATTTATTTATTTATTTCCTTTTTTTGTATTCGCTCTTTTTCGATTGGAAAGTATGCTGGAACTATATGAATCCATAATGTAATGTCGTCTTTTTCGGCTCCAAAATGTGGCATTTCTCAATTTCAATTGCCCCAACTTTTTGTTTTTTCCTTTCTTTTACTAGCTTATTGGATTTAATCCATGTTATTTTCAGCCTCTACATCCCTAAAGAGGCCATCCTTTTTCTTCTCTAAAATATAAGTACTGACCCAAGTGCACTTAATGGTTGGCTCATTTATTTTCACCCATCCACGATCAATTTATAGGATTCTGTGCGTTTCTCTACTTAATGAAGATAATCATGACGGCTAAGTGATTTTATGCTAAATGTCGCTGGTTCTTCAGGCTTCCAGTGGAATTAGCAAGCATGCAGTCTCTAATGCCATTGCGCAGTGTTACTGCTTCTCCCTTGTTTACTTCGTTGCTTTCCTTCCACAACAACAGTTGGGGTTGTCTATCTAAAGGTAACCTTTCTAGTTTTAGTCTTTTAGCTCATTCTACATTGCCTAAATTAGCTCATCGGAAATTTCCAACATATACTATTTGTTATTAGGATCTTATAAGTTTATTGTAGTTATACTATCTTCAAGTTATTGCAATTTGGTATTCCTGTTTTGGTAATTGACGTGTGTTTTGTTAAACAACCTGTAAATTGTTAACCATATTTTGACGTTTTATTGATTCTGTAATCACGCCCCTGTTATCCCTTGTTTGTTCGGATTTAACTTCTTGTTAGGCAATTTCCTGTTTTTCTTACTTCCAGGTAACCTCTCTAGTTTTAGGCTTTTAGCTCATTCCATATTGTCTAAATTAGCTCACCTGAAATTTCCAACATATACTCTTTGATAAGTTATTAGGATATTTGAGCTTTCTTGTAGTTATACTGTTCTTTGTTGGAATTTGGTATTCCTGTTTTGGTTATTGATGCATGTTTTGATAAAACACCTGTAAAAAGTCAACCATAGTCTGACTTTTTATTGCCCCATTTGTTTGGATGTAACTTCTTGTTATGGTAAATGGTGATTTCCCGGTTTTCTTACTTCCAGAAAGACGGAACACTTAAGTATGAGCTCACCTACGCCGTTATTTGCTCTTTACAATTCTTCACTTTATTTATGTTTGTTCCTAAGCATCTGTAGTTGTCTTTTTACATTCTTCTACAGCTTTTTTCCTTTTGAATTTCTTTTTTAAATTTTCTATGACCCATGCTTCAATTATGCTCTCATTTTGTTGAAATGATACTTTTGGTGATCTCTTTTTTTGTAGCTATGCCTGAGGAAAAAGAAATCTTGAACGCTGATTTCAACTCCAAGATGCTTCTAAAGGGCCTGTCTTACACCGAACTTGAGGCAAGTCCTTGCTAAACTCTCTCTTTCTTGTATCTTTTTCAAAAAATGCTCTTTCTCGTTTGCACTTATTTCTCTCTTCTTCTTCCACGCTTAATGAAGAAAACCCTTTGATCTGATACACATGTTCTAATTTTTGTTTTTACTCGAATACGTACACTGATAGAAATGGGTTCAAGCTCAAGGATACAGACCTGGCCAAGCTTTAATGCTGTGGAAACGTCTTTATGGGGATAACATTTGGGCACATACCGGTGATGAATTAGAAGGTCTTCTTGCTTTCTTTACTTATTTGGAATATGAACCTTTCTTTAGACTTTAACATTTTCATTGGTAGCTGATTTTTTTCCTTGATTTGCTTTCCTCTTGTTGTAACTCGTAACCTATCTACTCTATCCAATGACTTTTTCTTTGCTATAAAATCTTAGGGTTAAACAAGGATTTTAAGAAAATGTTGATTGAAAACGCTGAGTTCAGGGCATTGTCTTTGAGGGAAATTCTCCCTTCATGTGATGGAACGAGGAAGGTCTGTATAGTTTCATTCTAGCAAGTGCTGTTATAATCATTTAATTTCTTTACTTTTTTTGCTGTGTGTTCTGGCTCCACATTGTAAAATCATTTGTTTTTTTCTAAAACCAAAATGAAACTTTGACTGCATAAATGAAAGGAGATTATTGGTCAAAGCACAAAGAAACAATATTGTAATGAATGTGAATGATGTTCAAAGTAAAAAGACAAGTAAGACAGAGAAAACTTAGACCAGGGGACATAAGAACTAATCAGAAAACAATGATATTCCAGATTAAAGATAAATTTTGAATAGAGAGTCTTCTATAAGACTTGGATGGAGTGCACCAAGAAAAGGTCTAAACCGAACATGCTCGAACCAATTAAATCAAGGAATAGATGTTGACCGGCCGAACAAACTTGACTTACGTACAAAACCTCGGTCTGGAAAAAAAAATTTGCGTTGCCAATACAACATATTTTACCTAACAGAGGAACAACTTCATGCAGATTAGCTCCATGAAACTCCCTAAGAAGACCCAAAGAACTCAAAGCTTATGGATAAAAATTCTTGAATACCGCTTCCAGGGAGTAACTTCACTAAAATGCACTACACCAATATCATCATTTTTATTTAACTAGAAACAAGCCTCTTCATTAAGATAATGAAATGAGACAAATGCTTAAAGTACAAGCAATACAAAAAAAGAAAAATAGGATCCGTAAGTGCACTCTGATATGATGTAGTAGGAACTAGGGTATTATGGTCAAATCCTTAATTTATTAGGATTAGGAATAGGATTATTTTCTTTTATTAATTAGGATCAAGATTAGTTTCTTTTATTAATTAGGATTAGAATTAGTTTATACTAAAAGCGGTAAAGAAAATAGACACTAAGTTGTGTGGAAACTCGAGTACCAGGAGAAAAACCACCATATGACTTTTTTTAAAAATTTCTCATGTTAACAAATGATACAAAGTGGAAACAAATAAACAACATGCATGTGATAAAAAAGGAGAGAAAATTAGGTTAAATCCTTCCTTGGGCCAAGTCCACTAATTCTAACACTCCCCCTCAAGTTAGGACGTAGATATCAATGAGACCCAACTTGCTAACACATGAGTCAAAGCTTTGAAAAGCCCCTTGGTGAGAACATCAACAACCTGTTGGCTCGGGGGATGTAAGGAATGCATGTGCTACCATTGCCCAATCTTTCTTTAATGAAGTGTCGACCAATCTCCATATGTTTAGTTTTATCATGTTGAACTGGATTGTTGGCAATGCTAATAGCTGCCTTATTATCACAGAATAATTTCATCTGCACCTCACAGTCCTAATGAAGGTCAGATAAACTTTTTTAAGCCAAATTTCCTCATATATCCTCAAACTCATAGCTCTGTATACAACTTCAACACTGCTTCTAGCCACAACCCTTTGCTTCTTACTCCAAGTTTTGCAAAATTGCCCCATATAAAGATATAGTAGCCTGAGGTGGATTTCCTATTAACGACGGACCATGCCCAGTCAGAATCAGTATAGGCCTCAATAGCTCTCCTGTCGGTCTTCTTGAACATAAACCCTTTATCAAGAGTTGTTTTTAAGTACCTCAAGATTTTGTTAACTGCCTCCATGTGTTCCTCACAGGGAGCCTGCATGAACTGGCTAACGGTTCTCACATCATAAGAGATATATGGTGGAGTATGTGACAAGTAAATCAACTTTCCCACAAGGTGTTGATATTTTTCTTTATCAGCTGGAGCTTTATCACCTGAATTTCCCAATTTACAGTTGAATTCAACAGGAGCATCAGTAGGACGATATCCCAACACACCTGTCTCGATCAACAAATCGAGGGTATACTTCCTTTGAGATACGAAGATACCTTCTTTTGATCTAGCTACCCCATCCTAAGGAAATATTTTAGATTCCCCAAGTCATTAATTTCAAACTCATCACCCATCTTCTTTTTCAGTTGGATGATCTCAGTGATGTCATACCCAAATAAAACAATGTCATCAATACAAACAATCAACACGGCAAGCTTTCCAGCCTTGGAGACTTTTGTTGACAAGGTGTGATCAATCATGCTCTCGATGATTGTTCTAGTCCATACAAGGATTTCTGAAGTTTGCAAACCCAATGATCAAACTAGGCTCCAAACCCTAGAGGGGGGATCATATAGACTTCCTCTTCCAAGTATCCATTCAAGAATGCATTCTTAACATCTAATTGATATAGAAGCCAATTTTTATTCACAGCAACAGCTAACAGGACTTCAACAGTATCTAGTGTTGCAACTGGAGAAAAGGTTTCTAAATAATCGACACTATAGGTTTCAGTAAACTCTTTTGCAACTAACCTAGCCTAGTGTCTGTCAAGAGCTTCATTTGCCTTGTATTGAGTGTGAACCCATTTACATCCCATGGTTTTATGCTCCTTGGGAAGAGTACAGATCTCCCAAGTTTTATTCTTTTCAAGAGCTCTCATCTCTTCCATAACTGTTGTTTTTCACTCAAGACATTCTAAAACAATGTGGATATTTTTAGGTGTCATGGTAGAATCAAGGCTGGCTATGAAAACTTTAAACTGTGGTGATAGACTCTCATAGGAAACATAGTTACAAATGGTGTGCTTTGTGCAGGACCTAGTACCTTTTCTCAGCACATTAGGAATGTCAAGAGAAGGATCATACATTTATACTCATCTAGATTACTTGAATGATCATGTTCAGTCTCATTACCAACAATTTCTCCTCTAACCTCAACCTTGTCAACACTGTCCTTTCTCCCATATCTTCAGGAACAACTATATCAAAGCTGTCATTCTCACTCATTTTACTATCAACACAAGTCGATAGGATTAGTCATACCTTGATCTTATGGTGGTTTAGAGTCTTGGACCGGAGCTGGTTGATCAGTAGGGGATCCAATTTCCTTTTCGAGATTCCTCTTATAATAGGTTTTTCAGGGTTCAGGGAACTAGGTTTATAGGTTAGACTGTGTGATGAGGATTGGGGTTAGGTAAGGTAACAAGATTAGGACTGGTAGACTCTTCACTCACACCTCGCTCTAAAGATGGCTAACAGGAAAAGAAAGGTCGATCCTCAAGAAAAGTGGCATTCATAGTGGCAAAGTATTTAGGGAAGGAGGATGGGAACATTTATAGCCCCGCTGATGAAGAGAATACCCAACAAACACACACGCCTAAGCCCGAGGGGTGAATTTGGTCTCTTTATGGCCAAAGCTATGAACATAGGTTGTAGCTGTACACCCAAACCCTTCGAGGGGAACCTCAGAAGTGAGGCAGGTAGAGGAGACATCAATGGTACAAAGTGTTTTATCTTATACCATATTGAAAGCAATAAAAAGGAATATGATACTGAGTTACGTGAAAACCTGAGAACCGGGAGAAAAATTTATTTTCTCGTATTAACAAAAGGTACAATTGGGGAAAATAAATAGACATGCTTAATGTAAAAAAGGAAAGAATAATAGGGTTAATCTTTATTTGGGCTTAAGCGCACTTATTCTAACAGAAAGAAGAGATTTTTTGAAGTTAGGAATCGGGGGAAGAAGAGGGAGATGAAGAGGACTTGGAGTTGAATTAACTGTGAATATTTTTGTGGAAATTCATTGATGGGATCTATGCCTTTAAATTTCAAAGTTTGGACTCGTGAATATTCTGTGTTAACTGTGAATGATTACTACACTATTATTGTTCTTTCCTTTAGTTCTTTGGCTTTGTGCTCTCAAAGATTAGTCTGATTAATTTTAAAGCTCACAGGATATTACAGATTTTGTTCAATCTGGAAGATGGCCTGATAATAGAAACTGTTGTTATACCTTGCGATAGAGGCAGGACCACTGTTTGCGTTTCAAGTCAAGTGGGTTGTGCCATGAACTGTCAATTCTGCTACACCGGCAGGCAAGCTCCAATCTTCAATTCCGTGCATGATCTTAATTGAATTAAACAATAATGATTAGATTGTTTTTTTTTTTGTTAGATATTATATTAAATTTGTCTTCATCCATTAGCTTAAGCTTTTAGGTTAAATTGTGATTTAAGATGGTATCTGAGTAGGTGATCCAGGGAGGTTATGTGTTCAAGTCATTGTGTTGTTGTTTTCTCTCCAATTAATATTAATTTCTACTTGTTGGGTCTTTTTTCACATTTCAAGCTCACAAGTGAGAGGGAGTGTTAGATATTATATTGAATTTGCTTTCATCCATTCACTTGAGCTTTTGGATCACTTGATGATTCAAGATTTTTTTATTCAATTTTTTCAGGATGGGCCTAAAGAGACACCTGACTGCTGCTGAGATAGTAGAACAGGCAGTTTTTGCAAGGCGTTTGCTTACCAGTGAAGTGGGTTTAATTACTAATGTTGTGTTTATGGTATGTTTAAGATCTGAAACTATTTAAAATACAAGAAAAATGAAATATATTGAAATTTTTGTCTTTTTTGGGATTTTTGTATTCTTTTAACATGCTGATCTACTGTATATTCAGTTTCTGGTTTATTTACCAAGGAAAATTTCATTATGGTAGCAAATAAGGAGATTTTAAAAGCAAAAGGAAAGAATATTGTTGGTAAGAACGAGGATCGGAGTAACATTTTATTGATGGTGGTCCTATTGGTTTGGCACTCTTACATAAGAATGATTTTCTTTCAATTTGTTGTGCCTATAATGTTCTTTTGTTTTTTTTGTTTTAAACGGTAACAAGCCTCTTCATTAATAAAATAAAATAGAGTAAAGCTCAAAGTACAAGAGAATTATACAAAAAGCTAGAAATACAAATGGACAAGGATTAGGAGACGCACTTGGACATCTGAACTAGGTTGGCACCCCCTTAGCTCCATCATATCCGAACTACTAAAATTGGTGAAATAAACATGCCCTACAAAAGACCAAGACTCCCAACAATCTGTATAAGTGAGTAATCAGATACAAAGGCAACAAAATTCAAAGTCAAAGGACTTCAAAAATCTCCAAACAAACGAGAGTCTAATTGGAAATAATACAAACGATAAGCTGGAAAAAACAAAAGAGCTCAAAAAGCATGATAGTAGTATTCTGTGAAAAACTTGGAGAAGGAACACCAGAGGGAGGCGGTCTGAATAAGCCAAAACAATGCTGAAGAACAAAAAGAAACTTCATTCTTGAGGATACCTCTTCTAGGCCTCTTAATATCGATGAGAGAATCTTCCTTTAGGACAAAACAAGCATGAGCTTCTTACTTTGATATTTAGGCGAGAATTAGTTAACCAAAGAAAACGGCTATCAATCAATACTAAAGGAGATCTTCTACGGGATGAAAGGATTTGAGAGAGTTTGAGTAAATGGTGCCTATTTAAGAATTCGAAACACAAACGAAGGAATAAGCTCTAATCAAAGGGTCCATGTTCAGTTGCTTCTGCAATCCTTTGACGGTTAATGCACTTTAATCAAAGGGTCAATGTTCAGGAAGTCTACATGAGCCCCCTGCCTGGTTTTGAAGCCCAGTTGGGTCAGCATGTGTGTAAACTCCATAAATCCCTATATGGTCTGAAATAGTCTCCTAGAACATGGTTTGACAGACTCACTACCTTTGTCAAGTCCCAAGGGTATAGTCAGGGGCACTCTGATCATACTTTATTTATAAAGGTTTCCAAGACAGGGAAGATTGTTGTTCTAATAGTTTATGTGGATGACATTGTTTTGACTGGAGATGATCAGGCAGAAATCAGTCAACTAAAGCAGAGAATGGATGATGAATTTGAAATCAAGGATTTGGGAAATCTGAAATATTTCTTTGGAATGGAGGTGACTAGATCTAAAGAAGGTATCTCTGTGTCTCAGAGAAAATACACCATTGATTTACTAAGACGGGTATGTTGGGATGTCATCCCACTGACACTCCTATTGAATTCGACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACATTATCAGCGCCTCATGAGTAAATTGATTTACTTATCCCATGCTCGTCCTGATATTTCCTTTGTTGTGAATGTTGTTAGTCAGGTTATGCAGGCTCCTTATGAGAAACACATGAAAATTGTCAACAAAATTTTGAGATACTTGAAATCACCACCTAGTAAAGAGCCGATGTTTAGAAAAACAGACAAAAAGACCATTGAGGCATATACTGACTCGGATTGGGCAGGATCTGTTGTTGATTAAAAGTCTACCTCCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGCGCTAGAGCCGAATACAGAGCTATGAGTTTGGGAATATATGAGGAAATTTGGCTTCAAAAAGTTCTGTCGGATCTTCATCAGGAATGTGAGACACCATTGAAGCTTTTCTGTGATAATAAAGCCGCTATTAGTATTGCTAACAACCCTGTTCAACATGATAGAACTAAACATGTTGAGATTGATCAGCATTTCATCAAAGAAAAACTTGACAGTAGGAGCATATGCATTATGTACATTCCTTCGAGTCAACGGGTTGCTAATGTTCTTACCAAGGGGCTTCTCAAACCAAACTTCAACTTTTCTGTTAGCAAGTTGGACCTCATTGATATTTACGTCCCAACTTGAGGGAGTGTTAGAATCTTTTCCTTATTTTCTAAATATTTTCCTTGTTAGAATCCTAGAATATTTATGAAAAGGTTATGGGAATATTTTCCTTATTTCCTAAATCTTTTTCTTTTTTATTTCCTTGTATACTCTATTTATTCTCCCTTGTACCTATTGTATTATTTATTAAAGAATAACAACAAACAATCGTGGTTTTTTTCCTAGTATTCGAGTTTCCACGTAAATCGGTGTGTGCACTTTGTCTCTCATTTCAATAGTTTCCATTGTTAAAACCTTCGGACATTTATAATGGGTTGTCTCAGGAGAACCATTATCCTTTTCCATGTTTTGATCACAATAACTGAAATTGATTAATTAGGGAATGGGAGAGCCACTTCACAACATTGACAATGTCATTAAAGCTGTAAATATAATGGTTCATGAACAAGGACTTCATTTCAGTCCACGCAAGGTCACTGTTTCAACCAGTGGACTTGTTCCCCAGCTGAAACGTTTCCTGAATGAATGTAACTGTGCTTTAGCTGTTAGTTTGAATGCAACTACTGATGAGGTACGTGCTTGCAGTTGGCATTAATCAAATGCTTGAAATAAAAAATGTGAAGAATTCCCTTCTCTTGCATTGGAAAATTGCAGGTTAGGAATTGGATCATGCCAATAAACCGAAAGTATAAGTTAGGCTTGCTTCTTCAAACTTTACGGGAGGAACTTCGTTGCAAGCACAAGTACAAGGTTCTTTTTGAATATGTGATGCTTGCTGGGGTTAATGATAGGTATGTCAACAATTTCTATGTTTGAACTAAATCATTTTGCTTTAACTGGAGCTATAGACTATAGTTGATGATTTTATCAAAATTTTCTTTACAATCATTTTTATCTTTTGTTTTAATTTTACATGCAGCATTGAAGATGCAAAGAGGATCGTTGATCTTGTCCAGGGTATTCCATGCAAGATTAACCTTATTTCATTTAATCCACATTGTGGATCTCAATTTAGACCTACCTGTAAGGAGAAGATGATTGGGTTTCGAAATGTTTTGGCTGAAGCCGGGTTGACTGTTTTCTTGCGACTAAGTAGAGGTGATGACCAGATGGCTGCGTGTGGTCAGTTAGGCAAACCCGGTATTGTTCAAGCTCCTTTACTTCGTGTGCCAGATCGATTTCAAATGGCAATGAAATTATGTCTCTAGTTCCTACATCAAGGTTAAAACACATTGGCATCACTCCATTGACGTGGCAAAAATACGGGCATTGGTTGGAATTTATGCCTGTCTTTAGCTTTCAATTCTTCTTGAAGGGGAAGCTATGTATTCAGCCCCCCTCTTCTTGGAGGCAAAGCTATGCATTCAGCCCCAGATCAAAAAGTTCAACCCTCACGTTTTTGTAAAGTTATTTTCATTCTTTTATGTTCTTTTTAACTTATACCCTTACTTTTGGGAAAAATTTTGGAATTGATATTTAGAACCAATTGTATGTCATTCGTATGGAAATAGTGCGTTTGACAAACTTAAGATAGTTGAACTTGTGATGCAAAACTAGAAAACATAGATTCGTTTCAGGGTTGTGTTAGTACGTTATTTGAGTTTAGATAGATATATGATAGACCCCTATCTTACATAAGTACAGCAGAAGAGAGAAAAATGAGGAACGCGTGCATATGAATGACACGCGAGAATTGACAAAGGGAAGGGCTAGTAGTTAGTATAAATAAAAGTTAGTAAGTGGGAAAGTCGGTTATGTTTTGAATTTAGAGATATCTTTTTATTCTTCCTTGAAAGAAATTTTGACACTGTAGCAAGGAATTCATTCCTATATTATCATCGATAA

mRNA sequence

ATGGCCGCTTGCTGTTCCTGGAAAACCATACCAATTTCCTCCTCTTCCGCTCGAGGTCTTCTTCACCGTTCCTCCTCTTCTCCCTCTGCATCTCATTTTGTGTCCAATCCTACTATGTCTGGCGGACTTCCTTCTGCAAAGCCGCCCGCATCTTCCCGCTTCTCTGTTCATAGGCTAACCAACTTCAGGCTTCCAGTGGAATTAGCAAGCATGCAGTCTCTAATGCCATTGCGCAGTGTTACTGCTTCTCCCTTGTTTACTTCGTTGCTTTCCTTCCACAACAACAGTTGGGGTTGTCTATCTAAAGCTATGCCTGAGGAAAAAGAAATCTTGAACGCTGATTTCAACTCCAAGATGCTTCTAAAGGGCCTGTCTTACACCGAACTTGAGAAATGGGTTCAAGCTCAAGGATACAGACCTGGCCAAGCTTTAATGCTGTGGAAACGTCTTTATGGGGATAACATTTGGGCACATACCGGTGATGAATTAGAAGGGTTAAACAAGGATTTTAAGAAAATGTTGATTGAAAACGCTGAGTTCAGGGCATTGTCTTTGAGGGAAATTCTCCCTTCATGTGATGGAACGAGGAAGATTTTGTTCAATCTGGAAGATGGCCTGATAATAGAAACTGTTGTTATACCTTGCGATAGAGGCAGGACCACTGTTTGCGTTTCAAGTCAAGTGGGTTGTGCCATGAACTGTCAATTCTGCTACACCGGCAGGATGGGCCTAAAGAGACACCTGACTGCTGCTGAGATAGTAGAACAGGCAGTTTTTGCAAGGCGTTTGCTTACCAGTGAAGTGGGTTTAATTACTAATGTTGTGTTTATGGGAATGGGAGAGCCACTTCACAACATTGACAATGTCATTAAAGCTGTAAATATAATGGTTCATGAACAAGGACTTCATTTCAGTCCACGCAAGGTCACTGTTTCAACCAGTGGACTTGTTCCCCAGCTGAAACGTTTCCTGAATGAATGTAACTGTGCTTTAGCTGTTAGTTTGAATGCAACTACTGATGAGGTTAGGAATTGGATCATGCCAATAAACCGAAAGTATAAGTTAGGCTTGCTTCTTCAAACTTTACGGGAGGAACTTCGTTGCAAGCACAAGTACAAGGTTCTTTTTGAATATGTGATGCTTGCTGGGGTTAATGATAGCATTGAAGATGCAAAGAGGATCGTTGATCTTGTCCAGGGTATTCCATGCAAGATTAACCTTATTTCATTTAATCCACATTGTGGATCTCAATTTAGACCTACCTGTAAGGAGAAGATGATTGGGTTTCGAAATGTTTTGGCTGAAGCCGGGTTGACTGTTTTCTTGCGACTAAGTAGAGGTGATGACCAGATGGCTGCGTGTGGTCAGTTAGGCAAACCCGGTATTGTTCAAGCTCCTTTACTTCGTGTGCCAGATCGATTTCAAATGGCAATGAAATTATGTCTCTAG

Coding sequence (CDS)

ATGGCCGCTTGCTGTTCCTGGAAAACCATACCAATTTCCTCCTCTTCCGCTCGAGGTCTTCTTCACCGTTCCTCCTCTTCTCCCTCTGCATCTCATTTTGTGTCCAATCCTACTATGTCTGGCGGACTTCCTTCTGCAAAGCCGCCCGCATCTTCCCGCTTCTCTGTTCATAGGCTAACCAACTTCAGGCTTCCAGTGGAATTAGCAAGCATGCAGTCTCTAATGCCATTGCGCAGTGTTACTGCTTCTCCCTTGTTTACTTCGTTGCTTTCCTTCCACAACAACAGTTGGGGTTGTCTATCTAAAGCTATGCCTGAGGAAAAAGAAATCTTGAACGCTGATTTCAACTCCAAGATGCTTCTAAAGGGCCTGTCTTACACCGAACTTGAGAAATGGGTTCAAGCTCAAGGATACAGACCTGGCCAAGCTTTAATGCTGTGGAAACGTCTTTATGGGGATAACATTTGGGCACATACCGGTGATGAATTAGAAGGGTTAAACAAGGATTTTAAGAAAATGTTGATTGAAAACGCTGAGTTCAGGGCATTGTCTTTGAGGGAAATTCTCCCTTCATGTGATGGAACGAGGAAGATTTTGTTCAATCTGGAAGATGGCCTGATAATAGAAACTGTTGTTATACCTTGCGATAGAGGCAGGACCACTGTTTGCGTTTCAAGTCAAGTGGGTTGTGCCATGAACTGTCAATTCTGCTACACCGGCAGGATGGGCCTAAAGAGACACCTGACTGCTGCTGAGATAGTAGAACAGGCAGTTTTTGCAAGGCGTTTGCTTACCAGTGAAGTGGGTTTAATTACTAATGTTGTGTTTATGGGAATGGGAGAGCCACTTCACAACATTGACAATGTCATTAAAGCTGTAAATATAATGGTTCATGAACAAGGACTTCATTTCAGTCCACGCAAGGTCACTGTTTCAACCAGTGGACTTGTTCCCCAGCTGAAACGTTTCCTGAATGAATGTAACTGTGCTTTAGCTGTTAGTTTGAATGCAACTACTGATGAGGTTAGGAATTGGATCATGCCAATAAACCGAAAGTATAAGTTAGGCTTGCTTCTTCAAACTTTACGGGAGGAACTTCGTTGCAAGCACAAGTACAAGGTTCTTTTTGAATATGTGATGCTTGCTGGGGTTAATGATAGCATTGAAGATGCAAAGAGGATCGTTGATCTTGTCCAGGGTATTCCATGCAAGATTAACCTTATTTCATTTAATCCACATTGTGGATCTCAATTTAGACCTACCTGTAAGGAGAAGATGATTGGGTTTCGAAATGTTTTGGCTGAAGCCGGGTTGACTGTTTTCTTGCGACTAAGTAGAGGTGATGACCAGATGGCTGCGTGTGGTCAGTTAGGCAAACCCGGTATTGTTCAAGCTCCTTTACTTCGTGTGCCAGATCGATTTCAAATGGCAATGAAATTATGTCTCTAG

Homology

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BLAST of CSPI04G27560 vs. Swiss-Prot
Match: RLMN_GEOSL (Dual-specificity RNA methyltransferase RlmN OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=rlmN PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.6e-77
Identity = 162/337 (48.07%), Postives = 215/337 (63.80%), Query Frame = 1


Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           +KGLS  ELE+++  +G    +A  ++K LY     A +  E+  L K+ ++ L E A  
Sbjct: 7   IKGLSIDELERFLLGKGKERYRARQIFKWLYQRG--ATSFAEMTDLAKELRRDLEETARI 66

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
             LS   +  S DGTRK LF L+DG  +E+V+IP +  R T+C+SSQVGCAM C+FC TG
Sbjct: 67  STLSPEALEISRDGTRKYLFRLDDGCSVESVLIP-EEDRNTLCISSQVGCAMACEFCLTG 126

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
              L R+LT AEIV Q    +R +      + N+VFMGMGEPL N+DNVI+A+ IM+H+ 
Sbjct: 127 TFRLTRNLTTAEIVNQVCAVQRDVP-----VRNIVFMGMGEPLANLDNVIRALQIMLHDD 186

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           GL FS R++TVST+GLVP+++R        LAVSLNATTDE+R+ IMPINRKY L +LL 
Sbjct: 187 GLQFSTRRITVSTAGLVPEMERLGRSVTVNLAVSLNATTDELRDRIMPINRKYPLAVLLD 246

Query: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
             R       + K+  EYV+L GVND+++DAKR+V L+  IP KINLI FN H G  FR 
Sbjct: 247 ACR-RFPLPGRRKITIEYVLLGGVNDTLDDAKRLVRLLSDIPSKINLIPFNEHEGCSFRS 306

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQL 458
             ++ +  F   L +   TV  R SRG D  AACGQL
Sbjct: 307 PSQDAIDRFHRYLLDKHFTVITRSSRGADISAACGQL 334

[Close]

BLAST of CSPI04G27560 vs. Swiss-Prot
Match: RLMN_GEOMG (Dual-specificity RNA methyltransferase RlmN OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=rlmN PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.3e-76
Identity = 164/342 (47.95%), Postives = 215/342 (62.87%), Query Frame = 1


Query: 116 NSKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLI 175
           N K+ +K L+  +L  ++  +G    +A  ++K LY  +  A +  E+  L KD ++ L 
Sbjct: 3   NGKIDIKNLTLDDLIAFLAGKGKERYRARQIFKWLYQKD--ARSFAEMTDLAKDLRRDLE 62

Query: 176 ENAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQ 235
           E A    L    +  S DGTRK LF LEDG  +E+V+IP +  RTT+C+SSQVGCAM C+
Sbjct: 63  ETAVISDLEPEAMEVSRDGTRKYLFRLEDGNTVESVLIP-EEDRTTLCISSQVGCAMACE 122

Query: 236 FCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNI 295
           FC TG   L R+LTA EIV Q    RR +      + N+VFMGMGEPL N+DNV+KA+ I
Sbjct: 123 FCLTGTFRLTRNLTAGEIVNQICAVRRDVP-----VRNIVFMGMGEPLANLDNVVKALKI 182

Query: 296 MVHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKL 355
           ++H+ GL FS R+VTVSTSGLVP+++R   E    LAVSLNATTDEVR+ IMP+NR+Y L
Sbjct: 183 ILHDDGLQFSTRRVTVSTSGLVPEMERLGREVTVNLAVSLNATTDEVRDRIMPVNRRYPL 242

Query: 356 GLLLQTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCG 415
            LLL   R       + K+  EYVM+ G+NDS+EDAKR+V L+  I  KINLI FN H G
Sbjct: 243 RLLLDACR-SYPLPGRRKITIEYVMIKGLNDSLEDAKRLVKLLSDISSKINLIPFNEHDG 302

Query: 416 SQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQL 458
             F+   +  +  F + L     TV  R SRG D  AACGQL
Sbjct: 303 CSFKSPDQGAIDVFHSYLLSKHFTVITRSSRGSDISAACGQL 335

[Close]

BLAST of CSPI04G27560 vs. Swiss-Prot
Match: RLMN_PELPD (Dual-specificity RNA methyltransferase RlmN OS=Pelobacter propionicus (strain DSM 2379) GN=rlmN PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 5.7e-75
Identity = 165/348 (47.41%), Postives = 214/348 (61.49%), Query Frame = 1


Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           LK L+   LE++++ QG    +A  ++K +Y  +  A +  E+  ++KD +  L   A  
Sbjct: 7   LKNLTLPALEQFLRGQGKERFRATQVFKWIYQHD--ARSFQEMTNISKDLRAELEAKAYI 66

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
             L    +    DGTRK LF LEDG  +E+V+IP D GR T+C+SSQVGCAM C FC TG
Sbjct: 67  SNLEPEAVEVGGDGTRKYLFGLEDGNSVESVLIP-DEGRNTLCISSQVGCAMGCAFCLTG 126

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
              L R+LT AEIV Q +  RR +      I N+V MGMGEPLHN+DNVI A++IM+   
Sbjct: 127 TFRLTRNLTTAEIVNQIMAVRRDVE-----IRNIVMMGMGEPLHNLDNVIPAIHIMIDGN 186

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNEC-NCALAVSLNATTDEVRNWIMPINRKYKLGLLL 360
           GL  S R+VTVST GL P+++R   E  N  LAVSLNATTDE+R+ IMPINR+Y L  LL
Sbjct: 187 GLQLSNRRVTVSTCGLAPEMERLGRELPNVNLAVSLNATTDELRDRIMPINRRYPLKELL 246

Query: 361 QTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFR 420
              RE      + KV FEYVML G+ND++EDAKR++ L   IP K+NLI FN   G +FR
Sbjct: 247 SACRE-FPLPGRRKVTFEYVMLGGLNDTLEDAKRLLRLTSDIPNKVNLIPFNEFQGCEFR 306

Query: 421 PTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQL-GKPGIVQAP 467
              +  +  F   L +  +TV  R SRG D  AACGQL GK    + P
Sbjct: 307 SPTRAAIDAFHKYLIDRHVTVITRDSRGSDISAACGQLKGKLDAARQP 345

[Close]

BLAST of CSPI04G27560 vs. Swiss-Prot
Match: RLMN_SYNFM (Dual-specificity RNA methyltransferase RlmN OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rlmN PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 7.4e-75
Identity = 153/339 (45.13%), Postives = 219/339 (64.60%), Query Frame = 1


Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNI--WAHTGDELEGLNKDFKKMLIENA 180
           +K  +  ELE+WVQ  G R  +A  L++ +YG  +  W+   D    L++ F+  L    
Sbjct: 6   VKDFTLPELEEWVQGIGERSFRARQLFRHVYGRGVRSWSECSD----LSRMFRVQLEHGV 65

Query: 181 EFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCY 240
           E  ALS+ +   + DGT K LF L DG  IE V+IP D  R+T+CVSSQVGCA+ C+FC 
Sbjct: 66  ELDALSVLKKEQADDGTSKYLFGLRDGHSIEAVLIP-DLPRSTLCVSSQVGCALGCKFCL 125

Query: 241 TGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVH 300
           TG +G KR+L+AAEIV+Q    +R L S    ITN+VFMGMGEPL N+D+V++A+ ++  
Sbjct: 126 TGSLGFKRNLSAAEIVDQVCQVQRDLGSR-SRITNIVFMGMGEPLANLDSVLRAIRVIAE 185

Query: 301 EQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLL 360
             G+ FS R++T+ST+GLVPQL+R   E    LAVSL+A  +E+R  +MP+NR Y L +L
Sbjct: 186 PNGMAFSHRRITLSTAGLVPQLRRLGRESPVNLAVSLHAAENELRAELMPVNRTYPLEVL 245

Query: 361 LQTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQF 420
           +   RE      K ++ FEY++L G+ND  + AK++V L+ GI  K+NL+ FNPH GS F
Sbjct: 246 MAACREYPLPPRK-RITFEYILLDGINDDPKQAKQLVKLLHGIRAKVNLMPFNPHPGSVF 305

Query: 421 RPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQL 458
           R   +++++ F+  L  A +T  +R SRG +  AACGQL
Sbjct: 306 RKPSEQRVLAFQEALQNARITTHVRRSRGGEIGAACGQL 337

[Close]

BLAST of CSPI04G27560 vs. Swiss-Prot
Match: RLMN_PELCD (Dual-specificity RNA methyltransferase RlmN OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=rlmN PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 3.7e-74
Identity = 154/351 (43.87%), Postives = 215/351 (61.25%), Query Frame = 1


Query: 111 LNADFNSKMLLKGLSYTELEKWVQAQG---YRPGQALM-LWKRLYGDNIWAHTGDELEGL 170
           ++ D ++++ LK  +  EL +++   G   +R GQ +  ++ RL  D       D +  L
Sbjct: 3   VSMDQDTRIDLKNFTLEELTEFLAGMGKERFRAGQVMRWMYHRLVDDF------DAMSDL 62

Query: 171 NKDFKKMLIENAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSS 230
           +K  +  L + A    L+      S DGTRK LF LEDG  IE+V IP D  R T+C+S+
Sbjct: 63  SKVLRAELHQRARISRLTPEATEDSRDGTRKYLFRLEDGETIESVRIPMDDNRATLCIST 122

Query: 231 QVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNI 290
           QVGCAM C FC+TG  GL R+LT  EIV Q   A        G + N+V MGMGEPLHN+
Sbjct: 123 QVGCAMGCVFCHTGSFGLVRNLTPGEIVNQVCAA-----LADGPVNNIVLMGMGEPLHNL 182

Query: 291 DNVIKAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWI 350
           DNV+KA+ I+   QGL +SPRKVT+ST+GLVPQ++         LAVSLNATTDEVRN +
Sbjct: 183 DNVVKALQILYMPQGLDYSPRKVTLSTAGLVPQMQELGKRVRVNLAVSLNATTDEVRNRL 242

Query: 351 MPINRKYKLGLLLQTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKIN 410
           MP+N++Y L  L+   R +     K ++ FEY+++  VNDS +DA+R+V L+ GI  K+N
Sbjct: 243 MPVNQRYPLQQLMAACR-QYPLHAKKRITFEYILIRDVNDSDQDARRLVKLLHGIKAKVN 302

Query: 411 LISFNPHCGSQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQL 458
           +I FN H  S+FR   +E++  F+  L + G+    R S+G D  AACGQL
Sbjct: 303 IIPFNEHSASEFRAPTEERISRFQGYLLDHGMVAIRRASKGQDISAACGQL 341

[Close]

BLAST of CSPI04G27560 vs. TrEMBL
Match: A0A0A0L605_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G667190 PE=4 SV=1)

HSP 1 Score: 971.5 bits (2510), Expect = 3.9e-280
Identity = 482/482 (100.00%), Postives = 482/482 (100.00%), Query Frame = 1


Query: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60
           MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT
Sbjct: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60

Query: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120
           NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML
Sbjct: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120

Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF
Sbjct: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
           RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG
Sbjct: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
           RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ
Sbjct: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ
Sbjct: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360

Query: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
           TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP
Sbjct: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480
           TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL
Sbjct: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480

Query: 481 CL 483
           CL
Sbjct: 481 CL 482

[Close]

BLAST of CSPI04G27560 vs. TrEMBL
Match: A0A067GS22_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011810mg PE=4 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 2.3e-179
Identity = 306/362 (84.53%), Postives = 337/362 (93.09%), Query Frame = 1


Query: 117 SKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIE 176
           S++LLKG+S+TEL++WV++  +RPGQALMLWKRLYGD+IWAH  DELEGLNKDFKKML E
Sbjct: 112 SRVLLKGMSFTELQQWVRSHAFRPGQALMLWKRLYGDDIWAHCTDELEGLNKDFKKMLSE 171

Query: 177 NAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQF 236
           +AEFRALSL++IL S DGTRKILF L+DGL+IETVVIPC+RGRTTVCVSSQVGCAMNCQF
Sbjct: 172 HAEFRALSLKDILTSSDGTRKILFMLDDGLVIETVVIPCNRGRTTVCVSSQVGCAMNCQF 231

Query: 237 CYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIM 296
           CYTGRMGLKRHLTAAEIVEQAVFARRLL+SEVG ITNVVFMGMGEPLHN++NVIKA NIM
Sbjct: 232 CYTGRMGLKRHLTAAEIVEQAVFARRLLSSEVGSITNVVFMGMGEPLHNVENVIKAANIM 291

Query: 297 VHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLG 356
           VHEQGLHFSPRKVTVSTSGLVPQLK+FLNE NCALAVSLNATTDEVRNWIMPINRKYKLG
Sbjct: 292 VHEQGLHFSPRKVTVSTSGLVPQLKQFLNESNCALAVSLNATTDEVRNWIMPINRKYKLG 351

Query: 357 LLLQTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGS 416
           LL++TLREEL  K+ YKVLFEYVMLAGVNDS +DAKR++ LVQGIPCKINLISFNPHCGS
Sbjct: 352 LLIETLREELHFKNNYKVLFEYVMLAGVNDSFDDAKRLIGLVQGIPCKINLISFNPHCGS 411

Query: 417 QFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQM 476
           QF PT  EKMI FRN+LA AG TVFLRLSRGDDQMAACGQLG PG +QAPLLRVP++FQ 
Sbjct: 412 QFTPTTDEKMIEFRNILAGAGCTVFLRLSRGDDQMAACGQLGNPGAIQAPLLRVPEKFQT 471

Query: 477 AM 479
           A+
Sbjct: 472 AI 473

[Close]

BLAST of CSPI04G27560 vs. TrEMBL
Match: A0A067GUR9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011810mg PE=4 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 5.0e-179
Identity = 324/455 (71.21%), Postives = 371/455 (81.54%), Query Frame = 1


Query: 24  SSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLTNFRLPVELASMQSLMPLRSVTAS 83
           SSSS +         +S   PS+ PP  +  S    T  R P+  A+    +PL ++   
Sbjct: 37  SSSSKTTRTIRYKNHLSTFFPSSNPPPITFLSPVSPT--RRPLSTATCSPQIPLATIE-- 96

Query: 84  PLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKMLLKGLSYTELEKWVQAQGYRPGQA 143
                   + +++ G     +P++         S++LLKG+S+TEL++WV++  +RPGQA
Sbjct: 97  -------DYCSDAGGDNINVLPKK--------GSRVLLKGMSFTELQQWVRSHAFRPGQA 156

Query: 144 LMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEFRALSLREILPSCDGTRKILFNLE 203
           LMLWKRLYGD+IWAH  DELEGLNKDFKKML E+AEFRALSL++IL S DGTRKILF L+
Sbjct: 157 LMLWKRLYGDDIWAHCTDELEGLNKDFKKMLSEHAEFRALSLKDILTSSDGTRKILFMLD 216

Query: 204 DGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRL 263
           DGL+IETVVIPC+RGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRL
Sbjct: 217 DGLVIETVVIPCNRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRL 276

Query: 264 LTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRF 323
           L+SEVG ITNVVFMGMGEPLHN++NVIKA NIMVHEQGLHFSPRKVTVSTSGLVPQLK+F
Sbjct: 277 LSSEVGSITNVVFMGMGEPLHNVENVIKAANIMVHEQGLHFSPRKVTVSTSGLVPQLKQF 336

Query: 324 LNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKHKYKVLFEYVMLAG 383
           LNE NCALAVSLNATTDEVRNWIMPINRKYKLGLL++TLREEL  K+ YKVLFEYVMLAG
Sbjct: 337 LNESNCALAVSLNATTDEVRNWIMPINRKYKLGLLIETLREELHFKNNYKVLFEYVMLAG 396

Query: 384 VNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFRNVLAEAGLTVFLR 443
           VNDS +DAKR++ LVQGIPCKINLISFNPHCGSQF PT  EKMI FRN+LA AG TVFLR
Sbjct: 397 VNDSFDDAKRLIGLVQGIPCKINLISFNPHCGSQFTPTTDEKMIEFRNILAGAGCTVFLR 456

Query: 444 LSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAM 479
           LSRGDDQMAACGQLG PG +QAPLLRVP++FQ A+
Sbjct: 457 LSRGDDQMAACGQLGNPGAIQAPLLRVPEKFQTAI 472

[Close]

BLAST of CSPI04G27560 vs. TrEMBL
Match: A0A061E7V2_THECC (Radical SAM superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_010314 PE=3 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 3.3e-178
Identity = 332/478 (69.46%), Postives = 388/478 (81.17%), Query Frame = 1


Query: 5   CSW-KTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLTNFR 64
           C W + + ++++S    L  +SSS S+S   + P  S  L  + P   S   +   ++ R
Sbjct: 5   CMWMRRVRLTANSL--FLAMASSSSSSSPATALPYTSRHLLFSFPSLKSPHLISFASSDR 64

Query: 65  LPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPE---EKEILNADFNSKML 124
             + +++     P  S +ASPL    LS H+N        +P+    +   N +  SK+L
Sbjct: 65  RSISIST-----PCCS-SASPL----LSLHDND------NVPDFGGGESFENLEKVSKVL 124

Query: 125 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 184
           LKG++Y EL++WVQ+ G+RPGQALMLWK LYGDNIWAH  DELEGLNKDFKKML E+AEF
Sbjct: 125 LKGMNYAELQEWVQSHGFRPGQALMLWKCLYGDNIWAHNIDELEGLNKDFKKMLSEHAEF 184

Query: 185 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 244
           RAL+L++IL + DGTRKILF L+DGL+IETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG
Sbjct: 185 RALTLQDILTASDGTRKILFALDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 244

Query: 245 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 304
           RMGL+RHLTAAEIVEQAV+ARRLL+ +VG ITNVVFMGMGEPLHNI+NVIKA +IMVHEQ
Sbjct: 245 RMGLRRHLTAAEIVEQAVYARRLLSGDVGSITNVVFMGMGEPLHNIENVIKAADIMVHEQ 304

Query: 305 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 364
           GLHFSPRKVTVSTSGLVPQLKRFL+E  CALAVSLNATTDEVRNWIMPINRKYKLGLLL+
Sbjct: 305 GLHFSPRKVTVSTSGLVPQLKRFLHESKCALAVSLNATTDEVRNWIMPINRKYKLGLLLE 364

Query: 365 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 424
            LREEL  KH YKVLFEYVMLAGVNDSIEDAKR++DLV+GIPCKINLISFNPH GSQFRP
Sbjct: 365 ALREELEFKHNYKVLFEYVMLAGVNDSIEDAKRLIDLVKGIPCKINLISFNPHRGSQFRP 424

Query: 425 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAM 479
           + +EKMI FRN LA+AG TVFLRLSRGDDQMAACGQLG+PG +QAPLLRVP++FQMA+
Sbjct: 425 SSEEKMIEFRNALAKAGCTVFLRLSRGDDQMAACGQLGEPGAIQAPLLRVPEQFQMAL 464

[Close]

BLAST of CSPI04G27560 vs. TrEMBL
Match: V4TJ85_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031376mg PE=4 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 4.3e-178
Identity = 324/455 (71.21%), Postives = 367/455 (80.66%), Query Frame = 1


Query: 24  SSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLTNFRLPVELASMQSLMPLRSVTAS 83
           SSSS +         +S   PS+ PP  +  S    T  R P+  A+    +PL ++   
Sbjct: 37  SSSSKTTRTIRYKNHLSTFFPSSNPPPITFLSPVSPT--RRPLSTATCSPQIPLATIEDY 96

Query: 84  PLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKMLLKGLSYTELEKWVQAQGYRPGQA 143
                          C      ++  +L     S++LLKG+S+TEL++WV++ G+RPGQA
Sbjct: 97  ---------------CSDAGGGDDINVLPKK-GSRVLLKGMSFTELQQWVRSHGFRPGQA 156

Query: 144 LMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEFRALSLREILPSCDGTRKILFNLE 203
           LMLWKRLYGD+IWAH  DELEGLNKDFKKML E+AEFRALSL++IL S DGTRKILF L+
Sbjct: 157 LMLWKRLYGDDIWAHCTDELEGLNKDFKKMLSEHAEFRALSLKDILTSSDGTRKILFMLD 216

Query: 204 DGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRL 263
           DGL+IETVVIPC+RGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRL
Sbjct: 217 DGLVIETVVIPCNRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRL 276

Query: 264 LTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRF 323
           L+SEVG ITNVVFMGMGEPLH ++NVIKA NIMVHEQGLHFSPRKVTVSTSGLVPQLK+F
Sbjct: 277 LSSEVGSITNVVFMGMGEPLHKVENVIKAANIMVHEQGLHFSPRKVTVSTSGLVPQLKQF 336

Query: 324 LNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKHKYKVLFEYVMLAG 383
           LNE NCALAVSLNATTDEVRNWIMPINRKYKLGLL++TLREEL  K+ YKVLFEYVMLAG
Sbjct: 337 LNESNCALAVSLNATTDEVRNWIMPINRKYKLGLLIETLREELHFKNNYKVLFEYVMLAG 396

Query: 384 VNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFRNVLAEAGLTVFLR 443
           VNDS +DAKR++ LVQGIPCKINLISFNPHCGSQF PT  EKMI FRN+LA AG TVFLR
Sbjct: 397 VNDSFDDAKRLIGLVQGIPCKINLISFNPHCGSQFTPTTDEKMIEFRNILAGAGCTVFLR 456

Query: 444 LSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAM 479
           LSRGDDQMAACGQLG PG +QAPLLRVP++FQ A+
Sbjct: 457 LSRGDDQMAACGQLGNPGAIQAPLLRVPEKFQTAI 473

[Close]

BLAST of CSPI04G27560 vs. TAIR10
Match: AT1G60230.1 (AT1G60230.1 Radical SAM superfamily protein)

HSP 1 Score: 596.7 bits (1537), Expect = 1.3e-170
Identity = 298/427 (69.79%), Postives = 343/427 (80.33%), Query Frame = 1


Query: 69  ASMQSLMPLRSVTASPLFTSLLSFHNN---SWGCLSKAM-------------PEEKEILN 128
           A+    + L S   S   T+ + FH +   S+ C S +              P  K  + 
Sbjct: 29  AAFPGTLTLPSPLLSDRLTNSILFHESRSLSFSCFSSSSSSSAAYLPSLEEYPSAKGSVK 88

Query: 129 ADFNSKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKK 188
            D N K++LKG++Y  L++WVQ+ G+RPGQALMLWKRLY DNIWA+  DELEGLNKD K+
Sbjct: 89  RDDNQKVVLKGMTYASLQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKR 148

Query: 189 MLIENAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAM 248
           M+ E+AEF ALS ++I  + DGTRKILF L+DGL+IETVVIPCDRGRTTVCVSSQVGCAM
Sbjct: 149 MISEHAEFGALSFKDIRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAM 208

Query: 249 NCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKA 308
           NCQFCYTGRMGLKR+LT AEIVEQAV+ARRLL+ EVG ITNVVFMGMGEP HNIDNVIKA
Sbjct: 209 NCQFCYTGRMGLKRNLTTAEIVEQAVYARRLLSHEVGSITNVVFMGMGEPFHNIDNVIKA 268

Query: 309 VNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRK 368
            NIMV E GLHFSPRKVTVSTSGLVPQLKRFL E NCALAVSLNATTDEVRNWIMPINRK
Sbjct: 269 ANIMVDENGLHFSPRKVTVSTSGLVPQLKRFLRESNCALAVSLNATTDEVRNWIMPINRK 328

Query: 369 YKLGLLLQTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNP 428
           YKL LLL+TLRE L  +HKYKVLFEYVMLAGVNDS++DA+R+V+LVQGIPCKINLI FNP
Sbjct: 329 YKLSLLLETLREGLSSRHKYKVLFEYVMLAGVNDSMDDARRLVELVQGIPCKINLIQFNP 388

Query: 429 HCGSQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPD 480
           H GSQF  T ++KMI FRNVLAE G TV +R SRG+DQMAACGQLG  G VQAP++RVP+
Sbjct: 389 HSGSQFIQTEEDKMIKFRNVLAEGGCTVLMRFSRGNDQMAACGQLGMIGAVQAPVMRVPE 448

[Close]

BLAST of CSPI04G27560 vs. TAIR10
Match: AT3G19630.1 (AT3G19630.1 Radical SAM superfamily protein)

HSP 1 Score: 197.2 bits (500), Expect = 2.3e-50
Identity = 129/361 (35.73%), Postives = 193/361 (53.46%), Query Frame = 1


Query: 127 TELEKWVQAQGYRPGQALMLWKRLYG--DNIWAHTGDELEGLNKDFKKMLIENAEFRALS 186
           +E++   ++ G  P  A+ +WK +    D +W    DE+  L      +L    +    S
Sbjct: 10  SEIKSEFESAGINPKFAIQIWKYVIQNPDCVW----DEIPSLPSAAYSLLHSKFKTLTSS 69

Query: 187 LREILPSCDGTR-KILFNLEDGLIIETVVIPCDRG-------------RTTVCVSSQVGC 246
           L  +  S DGT  K+L  L++G  +E VV+  D               R+T+C+SSQVGC
Sbjct: 70  LHSLFHSSDGTTSKLLIKLQNGAFVEAVVMRYDTRLGMLGGKPRPGGIRSTLCISSQVGC 129

Query: 247 AMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVI 306
            M C FC TG MG K +LT+ EIVEQ V A R+       I N+VFMGMGEPL+N + V+
Sbjct: 130 KMGCTFCATGTMGFKSNLTSGEIVEQLVHASRIAD-----IRNIVFMGMGEPLNNYNAVV 189

Query: 307 KAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFLNEC-NCALAVSLNATTDEVRNWIMPI 366
           +AV +M++ Q    SP+++T+ST G+V  + +  N+    +LAVSL+A   E+R  IMP 
Sbjct: 190 EAVRVMLN-QPFQLSPKRITISTVGIVHAINKLHNDLPGVSLAVSLHAPVQEIRCQIMPA 249

Query: 367 NRKYKLGLLLQTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLIS 426
            R + L  L+  L +  +   + K+  EY+ML GVND  + A  + +L++     INLI 
Sbjct: 250 ARAFPLQKLMDAL-QTFQKNSQQKIFIEYIMLDGVNDQEQHAHLLGELLKTFQVVINLIP 309

Query: 427 FNP-HCGSQFRPTCKEKMIGFRNVLAEA-GLTVFLRLSRGDDQMAACGQL--GKPGIVQA 467
           FNP    SQF  +  + +  F+ +L E   +   +R   G D   ACGQL   +P I + 
Sbjct: 310 FNPIGSTSQFETSSIQGVSRFQKILRETYKIRTTIRKEMGQDISGACGQLVVNQPDIKKT 359

[Close]

BLAST of CSPI04G27560 vs. TAIR10
Match: AT2G39670.2 (AT2G39670.2 Radical SAM superfamily protein)

HSP 1 Score: 184.5 bits (467), Expect = 1.6e-46
Identity = 125/369 (33.88%), Postives = 201/369 (54.47%), Query Frame = 1


Query: 120 LLKGLSYTELEKW------VQAQGYRPGQAL-MLWKRLYGDNIWAHTGDELEGLNKDFKK 179
           +L G+S  EL++       +  +GYR  Q   +++KR        +  ++   L   F+K
Sbjct: 63  VLIGMSEPELQELAINLVLIFQEGYRGKQLHHLIYKRK------VNKVEDFSNLPLTFRK 122

Query: 180 MLIENA-EFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPC---DRG--RTTVCVSS 239
            L++   +     + + + + DGT K+L  LED L+IETV IP    ++G  R T CVSS
Sbjct: 123 GLVDGGFKVGRSPIYQTVTATDGTIKLLLKLEDNLLIETVGIPVQDDEKGITRLTACVSS 182

Query: 240 QVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNI 299
           QVGC + C FC TG+ G  R+L   EI+EQ +    +    V   TNVVFMGMGEP+ N+
Sbjct: 183 QVGCPLRCSFCATGKGGFSRNLQRHEIIEQVLAIEDVFKHRV---TNVVFMGMGEPMLNL 242

Query: 300 DNVIKAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFL-NECNCALAVSLNATTDEVRNW 359
            +V+ A   +   + +    R +T+ST G+   +K+   ++    LAVSL+A    +R  
Sbjct: 243 KSVLDAHRCL--NKDIEIGQRMITISTVGVPNTIKKLASHKLQSTLAVSLHAPNQSLREK 302

Query: 360 IMPINRKYKLGLLLQTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQ--GIPC 419
           I+P  + Y L  +++  R+  +  ++ +V FEY +LAGVND +E A  + +L++  G   
Sbjct: 303 IVPSAKAYPLEAIMKDCRDYFQETNR-RVSFEYALLAGVNDQVEHAVELAELLREWGKTY 362

Query: 420 KINLISFNPHCGSQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIV 473
            +NLI +NP  GS+++   K+ ++ F   L    +T  +R +RG D  AACGQL +    
Sbjct: 363 HVNLIPYNPIEGSEYQRPYKKAVLAFAAALESRKITASVRQTRGLDASAACGQL-RNKFQ 418

[Close]

BLAST of CSPI04G27560 vs. TAIR10
Match: AT1G70350.1 (AT1G70350.1 unknown protein)

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-10
Identity = 47/102 (46.08%), Postives = 65/102 (63.73%), Query Frame = 1


Query: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60
           MAA    + +  SSSS + L  RSS++ SAS    +  ++ G  S+   +S+R S+ RLT
Sbjct: 1   MAANGVRRALQASSSSGKILFGRSSAATSASKIGKSAGIAFGNGSS---SSTRPSLRRLT 60

Query: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSK 103
             R+PVEL++  SL+PL SVTAS L TSLLS  N +W CLS+
Sbjct: 61  FSRVPVELSAGISLIPLHSVTASALLTSLLSLSNQNWSCLSE 99

[Close]

BLAST of CSPI04G27560 vs. NCBI nr
Match: gi|449455661|ref|XP_004145570.1| (PREDICTED: uncharacterized protein LOC101210124 [Cucumis sativus])

HSP 1 Score: 971.5 bits (2510), Expect = 5.5e-280
Identity = 482/482 (100.00%), Postives = 482/482 (100.00%), Query Frame = 1


Query: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60
           MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT
Sbjct: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60

Query: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120
           NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML
Sbjct: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120

Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF
Sbjct: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
           RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG
Sbjct: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
           RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ
Sbjct: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ
Sbjct: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360

Query: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
           TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP
Sbjct: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480
           TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL
Sbjct: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480

Query: 481 CL 483
           CL
Sbjct: 481 CL 482

[Close]

BLAST of CSPI04G27560 vs. NCBI nr
Match: gi|659105255|ref|XP_008453050.1| (PREDICTED: uncharacterized protein LOC103493873 isoform X1 [Cucumis melo])

HSP 1 Score: 930.6 bits (2404), Expect = 1.1e-267
Identity = 465/481 (96.67%), Postives = 470/481 (97.71%), Query Frame = 1


Query: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60
           MAACCSWKTIPISSSSAR LLHR SSSPSASHFVS PTMSGGL SA+P ASSRFSV RLT
Sbjct: 1   MAACCSWKTIPISSSSARALLHRPSSSPSASHFVSIPTMSGGLHSARPAASSRFSVQRLT 60

Query: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120
           NF LPVELASMQSLMPLRSVTAS LFTSLLSFHNNS  CLSKAMPEEKEILN+DFNSKML
Sbjct: 61  NFSLPVELASMQSLMPLRSVTASALFTSLLSFHNNSRRCLSKAMPEEKEILNSDFNSKML 120

Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENA+F
Sbjct: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAKF 180

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
           RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG
Sbjct: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
           RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKA NIMVHEQ
Sbjct: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAANIMVHEQ 300

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ
Sbjct: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360

Query: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
           TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP
Sbjct: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480
           TCKEKMIGFRNVLAE+GLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAM+L
Sbjct: 421 TCKEKMIGFRNVLAESGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMEL 480

Query: 481 C 482
           C
Sbjct: 481 C 481

[Close]

BLAST of CSPI04G27560 vs. NCBI nr
Match: gi|659105259|ref|XP_008453051.1| (PREDICTED: uncharacterized protein LOC103493873 isoform X2 [Cucumis melo])

HSP 1 Score: 819.7 bits (2116), Expect = 2.7e-234
Identity = 403/411 (98.05%), Postives = 407/411 (99.03%), Query Frame = 1


Query: 71  MQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKMLLKGLSYTELE 130
           MQSLMPLRSVTAS LFTSLLSFHNNS  CLSKAMPEEKEILN+DFNSKMLLKGLSYTELE
Sbjct: 1   MQSLMPLRSVTASALFTSLLSFHNNSRRCLSKAMPEEKEILNSDFNSKMLLKGLSYTELE 60

Query: 131 KWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEFRALSLREILP 190
           KWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENA+FRALSLREILP
Sbjct: 61  KWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAKFRALSLREILP 120

Query: 191 SCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTA 250
           SCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTA
Sbjct: 121 SCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTA 180

Query: 251 AEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQGLHFSPRKVT 310
           AEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKA NIMVHEQGLHFSPRKVT
Sbjct: 181 AEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAANIMVHEQGLHFSPRKVT 240

Query: 311 VSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKH 370
           VSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKH
Sbjct: 241 VSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKH 300

Query: 371 KYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFR 430
           KYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFR
Sbjct: 301 KYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFR 360

Query: 431 NVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKLC 482
           NVLAE+GLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAM+LC
Sbjct: 361 NVLAESGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMELC 411

[Close]

BLAST of CSPI04G27560 vs. NCBI nr
Match: gi|641863753|gb|KDO82439.1| (hypothetical protein CISIN_1g011810mg [Citrus sinensis])

HSP 1 Score: 636.7 bits (1641), Expect = 3.2e-179
Identity = 306/362 (84.53%), Postives = 337/362 (93.09%), Query Frame = 1


Query: 117 SKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIE 176
           S++LLKG+S+TEL++WV++  +RPGQALMLWKRLYGD+IWAH  DELEGLNKDFKKML E
Sbjct: 112 SRVLLKGMSFTELQQWVRSHAFRPGQALMLWKRLYGDDIWAHCTDELEGLNKDFKKMLSE 171

Query: 177 NAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQF 236
           +AEFRALSL++IL S DGTRKILF L+DGL+IETVVIPC+RGRTTVCVSSQVGCAMNCQF
Sbjct: 172 HAEFRALSLKDILTSSDGTRKILFMLDDGLVIETVVIPCNRGRTTVCVSSQVGCAMNCQF 231

Query: 237 CYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIM 296
           CYTGRMGLKRHLTAAEIVEQAVFARRLL+SEVG ITNVVFMGMGEPLHN++NVIKA NIM
Sbjct: 232 CYTGRMGLKRHLTAAEIVEQAVFARRLLSSEVGSITNVVFMGMGEPLHNVENVIKAANIM 291

Query: 297 VHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLG 356
           VHEQGLHFSPRKVTVSTSGLVPQLK+FLNE NCALAVSLNATTDEVRNWIMPINRKYKLG
Sbjct: 292 VHEQGLHFSPRKVTVSTSGLVPQLKQFLNESNCALAVSLNATTDEVRNWIMPINRKYKLG 351

Query: 357 LLLQTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGS 416
           LL++TLREEL  K+ YKVLFEYVMLAGVNDS +DAKR++ LVQGIPCKINLISFNPHCGS
Sbjct: 352 LLIETLREELHFKNNYKVLFEYVMLAGVNDSFDDAKRLIGLVQGIPCKINLISFNPHCGS 411

Query: 417 QFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQM 476
           QF PT  EKMI FRN+LA AG TVFLRLSRGDDQMAACGQLG PG +QAPLLRVP++FQ 
Sbjct: 412 QFTPTTDEKMIEFRNILAGAGCTVFLRLSRGDDQMAACGQLGNPGAIQAPLLRVPEKFQT 471

Query: 477 AM 479
           A+
Sbjct: 472 AI 473

[Close]

BLAST of CSPI04G27560 vs. NCBI nr
Match: gi|641863754|gb|KDO82440.1| (hypothetical protein CISIN_1g011810mg [Citrus sinensis])

HSP 1 Score: 635.6 bits (1638), Expect = 7.2e-179
Identity = 324/455 (71.21%), Postives = 371/455 (81.54%), Query Frame = 1


Query: 24  SSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLTNFRLPVELASMQSLMPLRSVTAS 83
           SSSS +         +S   PS+ PP  +  S    T  R P+  A+    +PL ++   
Sbjct: 37  SSSSKTTRTIRYKNHLSTFFPSSNPPPITFLSPVSPT--RRPLSTATCSPQIPLATIE-- 96

Query: 84  PLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKMLLKGLSYTELEKWVQAQGYRPGQA 143
                   + +++ G     +P++         S++LLKG+S+TEL++WV++  +RPGQA
Sbjct: 97  -------DYCSDAGGDNINVLPKK--------GSRVLLKGMSFTELQQWVRSHAFRPGQA 156

Query: 144 LMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEFRALSLREILPSCDGTRKILFNLE 203
           LMLWKRLYGD+IWAH  DELEGLNKDFKKML E+AEFRALSL++IL S DGTRKILF L+
Sbjct: 157 LMLWKRLYGDDIWAHCTDELEGLNKDFKKMLSEHAEFRALSLKDILTSSDGTRKILFMLD 216

Query: 204 DGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRL 263
           DGL+IETVVIPC+RGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRL
Sbjct: 217 DGLVIETVVIPCNRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRL 276

Query: 264 LTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRF 323
           L+SEVG ITNVVFMGMGEPLHN++NVIKA NIMVHEQGLHFSPRKVTVSTSGLVPQLK+F
Sbjct: 277 LSSEVGSITNVVFMGMGEPLHNVENVIKAANIMVHEQGLHFSPRKVTVSTSGLVPQLKQF 336

Query: 324 LNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKHKYKVLFEYVMLAG 383
           LNE NCALAVSLNATTDEVRNWIMPINRKYKLGLL++TLREEL  K+ YKVLFEYVMLAG
Sbjct: 337 LNESNCALAVSLNATTDEVRNWIMPINRKYKLGLLIETLREELHFKNNYKVLFEYVMLAG 396

Query: 384 VNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFRNVLAEAGLTVFLR 443
           VNDS +DAKR++ LVQGIPCKINLISFNPHCGSQF PT  EKMI FRN+LA AG TVFLR
Sbjct: 397 VNDSFDDAKRLIGLVQGIPCKINLISFNPHCGSQFTPTTDEKMIEFRNILAGAGCTVFLR 456

Query: 444 LSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAM 479
           LSRGDDQMAACGQLG PG +QAPLLRVP++FQ A+
Sbjct: 457 LSRGDDQMAACGQLGNPGAIQAPLLRVPEKFQTAI 472

The following BLAST results are available for this feature:

BLAST of CSPI04G27560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RLMN_GEOSL	1.6e-77	48.07	Dual-specificity RNA methyltransferase RlmN OS=Geobacter sulfurreducens (strain ...	[more]
RLMN_GEOMG	2.3e-76	47.95	Dual-specificity RNA methyltransferase RlmN OS=Geobacter metallireducens (strain...	[more]
RLMN_PELPD	5.7e-75	47.41	Dual-specificity RNA methyltransferase RlmN OS=Pelobacter propionicus (strain DS...	[more]
RLMN_SYNFM	7.4e-75	45.13	Dual-specificity RNA methyltransferase RlmN OS=Syntrophobacter fumaroxidans (str...	[more]
RLMN_PELCD	3.7e-74	43.87	Dual-specificity RNA methyltransferase RlmN OS=Pelobacter carbinolicus (strain D...	[more]

BLAST of CSPI04G27560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L605_CUCSA	3.9e-280	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G667190 PE=4 SV=1	[more]
A0A067GS22_CITSI	2.3e-179	84.53	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011810mg PE=4 SV=1	[more]
A0A067GUR9_CITSI	5.0e-179	71.21	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011810mg PE=4 SV=1	[more]
A0A061E7V2_THECC	3.3e-178	69.46	Radical SAM superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_010314 PE=3 ...	[more]
V4TJ85_9ROSI	4.3e-178	71.21	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031376mg PE=4 SV=1	[more]

BLAST of CSPI04G27560 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G60230.1	1.3e-170	69.79	Radical SAM superfamily protein	[more]
AT3G19630.1	2.3e-50	35.73	Radical SAM superfamily protein	[more]
AT2G39670.2	1.6e-46	33.88	Radical SAM superfamily protein	[more]
AT1G70350.1	1.8e-10	46.08	unknown protein	[more]

BLAST of CSPI04G27560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449455661\|ref\|XP_004145570.1\|	5.5e-280	100.00	PREDICTED: uncharacterized protein LOC101210124 [Cucumis sativus]	[more]
gi\|659105255\|ref\|XP_008453050.1\|	1.1e-267	96.67	PREDICTED: uncharacterized protein LOC103493873 isoform X1 [Cucumis melo]	[more]
gi\|659105259\|ref\|XP_008453051.1\|	2.7e-234	98.05	PREDICTED: uncharacterized protein LOC103493873 isoform X2 [Cucumis melo]	[more]
gi\|641863753\|gb\|KDO82439.1\|	3.2e-179	84.53	hypothetical protein CISIN_1g011810mg [Citrus sinensis]	[more]
gi\|641863754\|gb\|KDO82440.1\|	7.2e-179	71.21	hypothetical protein CISIN_1g011810mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004383	rRNA_lsu_MTrfase_RlmN/Cfr
IPR007197	rSAM
IPR013785	Aldolase_TIM

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0006364	rRNA processing

Vocabulary: **Molecular Function**
Term	Definition
GO:0008173	RNA methyltransferase activity
GO:0003824	catalytic activity
GO:0051536	iron-sulfur cluster binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070475	rRNA base methylation
biological_process	GO:0030488	tRNA methylation
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0008173	RNA methyltransferase activity
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G27560.1	CSPI04G27560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004383	Ribosomal RNA large subunit methyltransferase RlmN/Cfr	PANTHER	PTHR30544	23S RRNA METHYLTRANSFERASE	coord: 100..478 score: 2.3E
IPR004383	Ribosomal RNA large subunit methyltransferase RlmN/Cfr	TIGRFAMs	TIGR00048	TIGR00048	coord: 119..457 score: 1.4E
IPR007197	Radical SAM	PFAM	PF04055	Radical_SAM	coord: 225..390 score: 9.2
IPR013785	Aldolase-type TIM barrel	GENE3D	G3DSA:3.20.20.70		coord: 221..424 score: 2.1
None	No IPR available	PANTHER	PTHR30544:SF3	SUBFAMILY NOT NAMED	coord: 100..478 score: 2.3E
None	No IPR available	PFAM	PF13394	Fer4_14	coord: 229..328 score: 1.
None	No IPR available	unknown	SSF102114	Radical SAM enzymes	coord: 218..435 score: 1.31

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G27560	Csa4G667190	Cucumber (Chinese Long) v2	cpicuB181
CSPI04G27560	MELO3C017082	Melon (DHL92) v3.5.1	cpimeB311
CSPI04G27560	MELO3C017082.2	Melon (DHL92) v3.6.1	cpimedB302
CSPI04G27560	CsaV3_4G037870	Cucumber (Chinese Long) v3	cpicucB212
CSPI04G27560	Cucsa.191670	Cucumber (Gy14) v1	cgycpiB302
CSPI04G27560	CsGy4G025780	Cucumber (Gy14) v2	cgybcpiB169

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G27560	Wax gourd	cpiwgoB418