CsGy4G025780 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G025780
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	dual-specificity RNA methyltransferase RlmN
Location	Chr4 : 31033006 .. 31043840 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGTTTTGAAGTTCATAAATATGATATGATTGAACGTAATATTTGATTTGATAGCCCATTATTAAAGAGGATACGCGACTTTCCGAGGGTGGTTTTACGAAAATGTCCAGGAAGATAATGAATTTGAGGGGTGGCCGTGTTTTCCACTCAATCAACACTCTTAATCGATTCGACAACGTGATAATTTCAGGGGTTTCATGGCAGTGAATAATTTTGGCTTCAAAGTTTGAAACAGAGAGCCAAGGGACTATGGCCGCTTGCTGTTCCTGGAAAACCATACCAATTTCCTCCTCTTCCGCTCGAGGTCTTCTTCACCGTTCCTCCTCTTCTCCCTCTGCATCTCATTTTGTGTCCAATCCTACTATGTCTGGCGGACTTCCTTCTGCAAAGCCGCCCGCATCTTCCCGCTTCTCTGTTCATAGGTTAACCAACTTCAGGTTGTATTTATTTATTTATTTCCTTTTTTTGTATTCGCTCTTTTTCGATTGGAAAGTATGCTGGAACTATATGAATCCATAATGTAATGTCGTCTTTTTCGGCTCCAAAATGTGGCATTTCTCAATTTCAATTGCCCCAACTTTTTGTTTTTTCCTTTCTTTTACTAGCTTATTGGATTTAATCCATGTTATTTTCAGCCTCTACATCCCTAAAGAGGCCATCCTTTTTCTTCTCTAAAATATAAGTACTGACCCTAGTGCACTTAATGGTTGGCTCATTTATTTTCACCCATCCACGATCAATTTATAGGATTCTGTGCGTTTCTCTACTTAATGAAGATAATCATGACGGCTAAGTGATTTTATGCTAAATGTCGCTGGTTCTTCAGGCTTCCAGTGGAGTTAGCAAGCATGCAGTCTCTAATGCCATTGCGCAGTGTTACTGCTTCTCCCTTGTTTACTTCGTTGCTTTCCTTCCACAACAACAGTTGGGGTTGTCTATCTAAAGGTAACCTTTCTAGTTTTAGTCTTTTAGCTCATTCTACATTGCCTAAATTAGCTCATCGGAAATTTCCAACATATACTATTTGTTATTAGGATCTTATAAGTTTATTGTAGTTATACTATCTTCAAGTTATTGCAATTTGGTATTCCTGTTTTGGTAATTGACGTGTGTTTTGTTAAACAACCTGTAAATTGTTAACCATATTTTGACGTTTTATTGATTCTGTAATCACGCCCCTGTTATCCCTTGTTTGTTCGGATTTAACTTCTTGTTAGGCAATTTCCTGTTTTTCTTACTTCCAGGTAACCTCTCTAGTTTTAGGCTTTTAGCTCATTCCATATTGTCTAAATTAGCTCACCTGAAATTTCCAACATATACTCTTTGATAAGTTATTAGGATATTTGAGCTTTCTTGTAGTTATACTGTTCTTTGTTGGAATTTGGTATTCCTGTTTTGGTTATTGATGCATGTTTTGATAAAACACCTGTAAAAAGTCAACCATAGTCTGACTTTTTATTGCCCCATTTGTTTGGATGTAACTTCTTGTTATGGTAAATGGTGATTTCCCGGTTTTCTTACTTCCAGAAAGACGGAACACTTAAGTATGAGCTCACCTACGCCGTTATTTGCTCTTTACAATTCTTCACTTTATTTATGTTTGTTCCTAAGCATCTGTAGTTGTCTTTTTACATTCTTCTACAGCTTTTTTCCTTTTGAATTTCTTTTTTAAATTTTCTATGACCCATGCTTCAATTATGCTCTCATTTTGTTGAAATGATACTTTTGGTGATCTCTTTTTTTGTAGCTATGCCTGAGGAAAAAGAAATCTTGAACGCTGATTTCAACTCCAAGATGCTTCTAAAGGGCCTGTCTTACACCGAACTTGAGGCAAGTCCTTGCTAAACTCTCTCTTTCTTGTATCTTTTTCAAAAAATGCTCTTTCTCGTTTGCACTTATTTCTCTCTTCTTCTTCCACGCTTAATGAAGAAAACCCTTTGATCTGATACACATGTTCTAATTTTTGTTTTTACTCGAATACGTACACTGATAGAAATGGGTTCAAGCTCAAGGATACAGACCTGGCCAAGCTTTAATGCTGTGGAAACGTCTTTATGGGGATAACATTTGGGCACATACCGGTGATGAATTAGAAGGTCTTCTTGCTTTCTTTACTTATTTGGAATATGAATCTTTCTTTAGACTTTAACATTTTCATTGGTAGCTGATTTTTTTCCTTGATTTGCTTTCCTCTTGTTGTAACTCGTAACCTATCTACTCTATCCAATGACTTTTTCTTTGCTATAAAATCTTAGGGTTAAACAAGGATTTTAAGAAAATGTTGATTGAAAACGCTGAGTTCAGGGCATTGTCTTTGAGGGAAATTCTCCCTTCATGTGATGGAACGAGGAAGGTCTGTATAGTTTCATTCTAGCAAGTGCTGTTATAATCATTTAATTTCTTTACTTTTTTTGCTGTGTGTTCTGGCTCCACATTGTAAAATCATTTGTTTTTTTCTAAAACCAAAATGAAACTTTGACTGAATAAATGAAAGGAGATTATTGGTCAAAGCACAAAGAAACAATATTGTAATGAATGTGAATGATGTTCAAAGTAAAAAGACAAGTAAGACAGAGAAAACTTAGACCAGGGGACATAAGAACTAATCAGAAAACAATGATATTCCAGATTAAAGATAAATTTTGAATAGAGAGTCTTCTATAAGACTTGGATGGAGTGCACCAAGAAAAGGTCTAAACCGAACATGCTCGAACCAATTAAATCAAGGAATAGATGTTGACCGGCCGAACAAACTTGACTTACGTACAAAACCTTGGTCTGGAAAAAAAAATTTGCGTTGCCAATACAACATATTTTACCTAACAGAGGAACAACTTCATGCAGATTAGCTCCATGAAACTCCCTAAGAAGACCCAAAGAACTCAAAGCTTATGGATAAAAATTCTTGAATACCGCTTCCAGGGAGTAACTTCACTAAAATGCACTACACCAATATCATCATTTTTATTTAACTAGAAACAAGCCTCTTCATTAAGATAATGAAATGAGACAAATGCTTAAAGTACAAGCAATACAAAAAAAGAAAAATAGGATCCGTAAGTGCACTCTGATATGATGTAGTAGGAACTAGGGTATTATGGTCAAATCCTTAATTTATTAGGATTAGGAATAGGATTATTTTCTTTTATTAATTAGGATCAAGATTAGTTTCTTTTATTAATTAGGATTAGAATTAGTTTATACTAAAAGCGGTAAAGAAAATAGACACTAAGTTGTGTGGAAACTCGAGTACCAGGAGAAAAACCACCATATGACTTTTTTTAAAAATTTCTCATGTTAACAAATGATACAAAGTGGAAACAAATAAACAACATGCTTGTGATAAAAAAGGAGAGAAAATTAGGTTAAATCCTTCCTTGGGCCAAGTCCACTAATTCTAACACTCCCCCTCAAGTTAGGACGTAGATATCAATGAGACCCAACTTGCTAACACATGAGTCAAAGCTTTGAAAAGCCCCTTGGTGAGAACATCAACAACCTGTTGGCTCGGGGGATGTAAGGAATGCATGTGCTACCATTGCCCAATCTTTCTTTAATGAAGTGTCGACCAATCTCCATATGTTTAGTTTTATCATGTTGAACTGGATTGTTGGCAATGCTAATAGCTGCCTTATTATCACAGAATAATTTCATCGGCACCTCACAGTCCTAATGAAGGTCAGATAAACTTTTTTAAGCCAAATTTCCTCATATATCCTCAAACTCATAGCTCTGTATACAACTTCAACACTGCTTCTAGCCACAACCCTTTGCTTCTTACTCCAAGTTTTGCAAAATTGCCCCATATAAAGATATAGTAGCCTGAGGTGGATTTCCTATTAACGACGGACCATGCCCAGTCAGAATCAGTATAGGCCTCAATAGCTCTCCTGTCGGTCTTCTTGAACATAAACCCTTTATCAAGAGTTGTTTTTAAGTACCTCAAGATTTTGTTAACTGCCTCCATGTGTTCCTCACAGGGAGCCTGCATGAACTGGCTAACGGTTCTCACATCATAAGAGATATATGGTGGAGTATGTGACAAGTAAATCAACTTTCCCACAAGGTGTTGATATTTTTCTTTATCAGCTGGAGCTTTATCACCTGAATTTCCCAATTTACAGTTGAATTCAACAGGAGCATCAGTAGGACGATATCCCAACACACCTGTCTCGATCAACAAATCGAGGGTATACTTCCTTTGAGATACGAAGATACCTTCTTTTGATCTAGCTACCCCATCCTAAGGAAATATTTTAGATTCCCCAAGTCATTAATTTCAAACTCATCACCCATCTTCTTTTTCAATTGGATGATCTTAGTGATGTCATACCCAAATAAAACAATGTCATCAATACAAACAATCAACACGGCAAGCTTTCCAGCCTTGGAGACTTTTGTTGACAAGGTGTGATCAATCATGCTCTCGATGATTGTTCTAGTCCATACAAGGATTTCTGAAGTTTGCAAACCCAATGATCAAACTGGGCTCCAAACCCTAGAGGGGGGATCATATAGACTTCCTCTTCCAAGTATCCATTCAAGAATGCATTCTTAACATCTAATTGATATAGAAGCCAATTTTTATTCACAGCAACAGCTAACAGGACTTCAACAGTATCTAGTGTTGCAACTGGAGAAAAGGTTTCTAAATAATCGACACTATAGGTTTCAGTAAACTCTTTTGCAACTAACCTAGCCTAGTGTCTGTCAAGAGCTTCATTTGCCTTGTATTGAGTGTGAACCCATTTACATCCCATGGTTTTATGCTCCTTGGGAAGAGTACAGATCTCCCAAGTTTTATTCTTTTCAAGAGCTCTCATCTCTTCCATAACTGTTGTTTTTCACTCAAGACATTCTAAAACAATGTGGATATTTTTAGGTGTCATGGTAGAATCAAGGCTGGCTATGAAAACTTTAAACTGTGGTGATAGACTCTCATAGGAAACATAGTTACAAATGGTGTGCTTTGTGCAGGACCTAGTACCTTTTCTCAGCACATTAGGAATGTCAAGAGAAGGATCATACATTTATACTCATCTAGATTACTTGAATGATCATGTTCAGTCTCATTACCAACAATTTCTCCTCTAACCTCAACCTTGTCAACACTGTCCTTTCTCCCATATCTTCAGGAACAACTATATCAAAGCTGTCATTCTCACTCATTTTACTATCAACACAAGTCGATAGGATTAGTCATACCTTGATCTTATGGTGGTTTAGAGTCTTGGACCGGAGCTGGTTGATCAGTAGGGGATCCAATTTCCTTTTCGAGATTCCTCTTATAATAGGTTTTTCAGGGTTCAGGGAACTAGGTTTATAGGTTAGACTGTGTGATGAGGATTGGGGTTAGGTAAGGTAACAAGATTAGGACTGGTAGACTCTTCACTCACACCTCGCTCTAAAGATGGCTAACAGGAAAAGAAAGGTCGATCCTCAAGAAAAGTGGCATTCATAGTGGCAAAGTATTTAGGGAAGGAGGATGGGAACATTTATAGCCCCGCTGATGAAGAGAATACCCAACAAACACACACGCCTAAGCCCGAGGGGTGAATTTGGTCTCTTTATGGCCAAAGCTATGAACATAGGTTGTAGCTGTACACCCAAACCCTTCGAGGGGAACCTCAGAAGTGAGGCAGGTAGAGGAGACATCAATGGTACAAAGTGTTTTATCTTATACCATATTGAAAGCAATAAAAAGGAATATGATACTGAGTTACGTGAAAACCTGAGAACCGGGAGAAAAATTTATTTTCTCGTATTAACAAAAGGTACAATTGGGGAAAATAAATAGACATGCTTAATGTGAAAAAGGAAAGAATAATAGGGTTAATCTTTATTTGGGCTTAAGCGCACTTATTCTAACAGAAAGAAGAGATTTTTTGAAGTTAGGAATCGGGGGAAGAAGAGGGAGATGAAGAGGACTTGGAGTTGAATTAACTGTGAATATTTTTGTGGAAATTCATTGATGGGATCTATGCCTTTAAATTTCAAAGTTTGGACTCGTGAATATTCTGTGTTAACTGTGAATGATTACTACACTATTATTGTTCTTTCCTTTAGTTCTTTGGCTTTGTGCTCTCAAAGATTAGTCTGATTAATTTTAAAGCTCACAGGATATTACAGATTTTGTTCAATCTGGAAGATGGCCTGATAATAGAAACTGTTGTTATACCTTGCGATAGAGGCAGGACCACTGTTTGCGTTTCAAGTCAAGTGGGTTGTGCCATGAACTGTCAATTCTGCTACACCGGCAGGCAAGCTCCAATCTTCAATTCCGTGCATGATCTTAATTGAATTAAACAATAATGATTAGATTGTTTTTTTTTTTGTTAGATATTATATTAAATTTGTCTTCATCCATTAGCTTAAGCTTTTAGGTTAAATTGTGGTTTAAGATGGTATCTGAGTAGGTGATCCAGGGAGGTTATGTGTTCAAGTCATTGTGTTGTTGTTTTCTCTCCAATTAATATTAATTTCTACTTGTTGGGTCTTTTTTCACATTTCAAGCTCACAAGTGAGAGGGAGTGTTAGATATTATATTGAATTTGCTTTCATCCATTCACTTGAGCTTTTGGATCACTTGATGATTCAAGATTTTTTTATTCAATTTTTTCAGGATGGGCCTAAAGAGACACCTGACTGCTGCTGAGATAGTAGAACAGGCAGTTTTTGCAAGGCGTTTGCTTACCAGTGAAGTGGGTTTAATTACTAATGTTGTGTTTATGGTATGTTTAAGATCTGAAACTATTTAAAATACAAGAAAAATGAAATATATTGAAATTTTTGTCTTTTTTGGGATTTTTGTATTCTTTTAACATGCTGATCTACTGTATATTCAGTTTCTGGTTTATTTACCAAGGAAAATTTCATTATGGTAGCAAATAAGGAGATTTTAAAAGCAAAAGGAAAGAATATTGTTGGTAAGAACGAGGATCGGAGTAACATTTTATTGATGGTGGTCCTATTGGTTTGGCACTCTTACATAAGAATGATTTTCTTTCAATTTGTTGTGCCTATAATGTTCTTTTGTTTTTTTTGTTTTAAACGGTAACAAGCCTCTTCATTAATAAAATAAAATAGAGTAAAGCTCAAAGTACAAGAGAATTATACAAAAAGCTAGAAATACAAATGGACAAGGATTAGGAGACGCAGTTGGACATCTGAACTAGGTTGGCACCCCCTTAGCTCCATCATATCCGAACTACTAAAATTGGTGAAATAAACATGCCCTACAAAAGACCAAGACTCCCAACAATCTGTATAAGTGAGTAATCAGATACAAAGGCAACAAAATTCAAAGTCAAAGGACTTCAAAAATCTCCAAACAAACGAGAGTCTAATTGGAAATAATACAAACGATAAGCTGGAAAAAACAAAAGAGCTCAAAAAGCATGATAGTAGTATTCTGTGAAAAACTTGGAGAAGGAACACCAGAGGGAGGCGGTCTGAATAAGCCAAAACAATGCTGAAGAACAAAAAGAAACTTCATTCTTGAGGATACCTCTTCTAGGCCTCTTAATATCGATGAGAGAATCTTCCTTTAGGACAAAACAAGCATGAGCTTCTTACTTTGATATTTAGGCGAGAATTAGTTAACCAAAGAAAACGGCTATCAATCAATACTAAAGGAGATCTTCTACGGGATGAAAGGATTTGAGAGAGTTTGAGTAAATGGTGCCTATTTAAGAATTCGAAACACAAACGAAGGAATAAGCTCTAATCAAAGGGTCCATGTTCAGTTGCTTCTGCAATCCTTTGACGGTTGATGCACTTTAATCAAAGGGTCAATGTTCAGGAAGTCTACATGAGCCCCCTGCCTGGTTTTGAAGCCCAGTTGGGTCAGCATGTGTGTAAACTCCATAAATCCCTATATGGTCTGAAATAGTCTCCTAGAACATGGTTTGACAGATTCACTACCTTTGTCAAGTCCCAAGGGTATAGTCAGGGGCACTCTGATCATACTTTATTTATAAAGGTTTCCAAGACAGGGAAGATTGTTGTTCTAATAGTTTATGTGGATGACATTGTTTTGACTGGAGATGATCAGGCAGAAATCAGTCAACTAAAGCAGAGAATGGATGATGAATTTGAAATCAAGGATTTGGGAAATCTGAAATATTTCTTTGGAATGGAGGTGACTAGATCTAAAGAAGGTATCTCTGTGTCTCAGAGAAAATACACCATTGATTTACTAAGACGGGTATGTTGGGATGTCATCCCACTGACACTCCTATTGAATTCGACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACATTATCAGCGCCTCATGAGTAAATTGATTTACTTATCCCATGCTCGTCCTGATATTTCCTTTGTTGTGAGTGTTGTTAGTCAGTTTATGCAGGCTCCTTATGAGAAACACATGAAAATTGTCAACAGAATTTTGAGATACTTGAAATCACCACCTAGTAAAGAGCCGATGTTTAGAAAAACAGACAAAAAGACCATTGAGGCATATACTGACTCGGATTGGGCAGGATCTGTTGTTGATTAAAAGTCTACCTCCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGCGCTAGAGCCGAATACAGAGCTATGAGTTTGGGAATATATGAGGAAATTTGGCTTCAAAAAGTTCTGTCGGATCTTCATCAGGAATGTGAGACACCATTGAAGCTTTTCTGTGATAATAAAGCCGCTATTAGTATTGCTAACAACCCTGTTCAACATGATAGAACTAAACATGTTGAGATTGATCAGCATTTCATCAAAGAAAAACTTGACAGTAGGAGCATATGCATTATGTACATTCCTTCGAGTCAACGGGTTGCTAATGTTCTTACCAAGGGGCTTCTCAAACCAAACTTCAACTTTTCTGTTAGCAAGTTGGACCTCATTGATATTTACGTCCCAACTTGAGGGAGTGTTAGAATCTTTTCCTTATTTTCTAAATATTTTCCTTGTTAGAATCCTAGAATATTTATGAAAAGGTTATGGGAATATTTTCCTTATTTCCTAAATCTTTTTCTTTTTTATTTCCTTGTATACTCTATTTATTCTCCCTTGTACCTATTGTATTATTTATTAAAGAATAACAACAAACAATCGTGGTTTTTTTCCTAGTACTCGAGTTTCCACGTAAATCGGTGTGTGCACTTTGTCTCTCATTTCAATAGTTTCCATTGTTAAAACCTTCGGACATTTATAATGGGTTGTCTCAGGAGAACCATTATCCTTTTCCATGTTTTGATCACAATAACTGAAATTGATTAATTAGGGAATGGGAGAGCCACTTCACAACATTGACAATGTCATTAAAGCTGTAAATATAATGGTTCATGAACAAGGACTTCATTTCAGTCCACGCAAGGTCACTGTTTCAACCAGTGGACTTGTTCCCCAGCTGAAACGTTTCCTGAATGAATGTAACTGTGCTTTAGCTGTTAGTTTGAATGCAACTACTGATGAGGTACGTGCTTGCAGTTGGCATTAATCAAATGCTTGAAATAAAAAATGTGAAGAATTCCCTTCTCTTGCATTGGAAAATTGCAGGTTAGGAATTGGATCATGCCAATAAACCGAAAGTATAAGTTAGGCTTGCTTCTTCAAACTTTACGGGAGGAACTTCGTCGCAAGCACAAGTACAAGGTTCTTTTTGAATATGTGATGCTTGCTGGGGTTAATGATAGGTATGTCAACAATTTCTATGTTTGAACTAAATCATTTTGCTTTAACTGGAGCTATAGACTATAGTTGATGATTTTATCAAAATTTTCTTTACAATCATTTTTATCTTTTGTTTTAATTTTACATGCAGCATTGAAGATGCAAAGAGGATCGTTGATCTTGTCCAGGGTATTCCATGCAAGATTAACCTTATTTCATTTAATCCACATTGTGGATCTCAATTTAGACCTACCTGTAAGGAGAAGATGATTGGGTTTCGAAATGTTTTGGCTGAAGCCGGGTTGACTGTTTTCTTGCGACTAAGTAGAGGTGATGACCAGATGGCTGCGTGTGGTCAGTTAGGCAAACCCGGTATTGTTCAAGCTCCTTTACTTCGTGTGCCAGATCGATTTCAAATGGCAATGAAATTATGTCTCTAGTTCCTACATCAAGGTTAAAACACATTGGCATCACTCCATTGACGTGGCAAAAATGGTGTGCAGGCTTACGGGCATTGGTTGGAATTTATGCCTGTCTTTAGCTTTCAATTCTTCTTGAAGGGGAAGCTATGTATTCAGCCCCCCTCTTCTTGGAGGCAAAGCTATGCATTCAGCCCCAGATCAAAAAGTTCAACCCTCACGTTTTTGTAAAGTTATTTTCATTCTTTTATGTTCTTTTTAACTTATACCCTTACTTTTGGGAAAAATTTTGGAATTGATATTTAGAACCAATTGTATGTCATTCGTATGGAAATAGTGCGTTTGACAAACTTAAGATAGTTGAACTTGTGATGCAAAACTAGAAAACATAGATTCGTTTCAGGGTTGTGTTAGTACGTTATTTGAGTTTAGATAGATATATGATAGACCCCTATCTTACATAAGTACAGCAGAAGAGAGAAAAATGAGGAACGCGTGCATATGAATGACACGCGAGAATTGACAAAGGGAAGGGCTAGTAGTTCGTATAAATAAAAGTTAGTAAGTGGGAAAGTCGGTTATGTTTTGAATTTAGAGATATCTTTTTGTTCTTCCTTGAAAGAAATTTTGACATTGTAGCAAGGAATTCATTCCTATATTATCATCGATAATAATTGAAATTTCATACTACATCCGAC

mRNA sequence

AAAGTTTTGAAGTTCATAAATATGATATGATTGAACGTAATATTTGATTTGATAGCCCATTATTAAAGAGGATACGCGACTTTCCGAGGGTGGTTTTACGAAAATGTCCAGGAAGATAATGAATTTGAGGGGTGGCCGTGTTTTCCACTCAATCAACACTCTTAATCGATTCGACAACGTGATAATTTCAGGGGTTTCATGGCAGTGAATAATTTTGGCTTCAAAGTTTGAAACAGAGAGCCAAGGGACTATGGCCGCTTGCTGTTCCTGGAAAACCATACCAATTTCCTCCTCTTCCGCTCGAGGTCTTCTTCACCGTTCCTCCTCTTCTCCCTCTGCATCTCATTTTGTGTCCAATCCTACTATGTCTGGCGGACTTCCTTCTGCAAAGCCGCCCGCATCTTCCCGCTTCTCTGTTCATAGGTTAACCAACTTCAGGCTTCCAGTGGAGTTAGCAAGCATGCAGTCTCTAATGCCATTGCGCAGTGTTACTGCTTCTCCCTTGTTTACTTCGTTGCTTTCCTTCCACAACAACAGTTGGGGTTGTCTATCTAAAGCTATGCCTGAGGAAAAAGAAATCTTGAACGCTGATTTCAACTCCAAGATGCTTCTAAAGGGCCTGTCTTACACCGAACTTGAGAAATGGGTTCAAGCTCAAGGATACAGACCTGGCCAAGCTTTAATGCTGTGGAAACGTCTTTATGGGGATAACATTTGGGCACATACCGGTGATGAATTAGAAGGGTTAAACAAGGATTTTAAGAAAATGTTGATTGAAAACGCTGAGTTCAGGGCATTGTCTTTGAGGGAAATTCTCCCTTCATGTGATGGAACGAGGAAGATTTTGTTCAATCTGGAAGATGGCCTGATAATAGAAACTGTTGTTATACCTTGCGATAGAGGCAGGACCACTGTTTGCGTTTCAAGTCAAGTGGGTTGTGCCATGAACTGTCAATTCTGCTACACCGGCAGGATGGGCCTAAAGAGACACCTGACTGCTGCTGAGATAGTAGAACAGGCAGTTTTTGCAAGGCGTTTGCTTACCAGTGAAGTGGGTTTAATTACTAATGTTGTGTTTATGGGAATGGGAGAGCCACTTCACAACATTGACAATGTCATTAAAGCTGTAAATATAATGGTTCATGAACAAGGACTTCATTTCAGTCCACGCAAGGTCACTGTTTCAACCAGTGGACTTGTTCCCCAGCTGAAACGTTTCCTGAATGAATGTAACTGTGCTTTAGCTGTTAGTTTGAATGCAACTACTGATGAGGTTAGGAATTGGATCATGCCAATAAACCGAAAGTATAAGTTAGGCTTGCTTCTTCAAACTTTACGGGAGGAACTTCGTCGCAAGCACAAGTACAAGGTTCTTTTTGAATATGTGATGCTTGCTGGGGTTAATGATAGCATTGAAGATGCAAAGAGGATCGTTGATCTTGTCCAGGGTATTCCATGCAAGATTAACCTTATTTCATTTAATCCACATTGTGGATCTCAATTTAGACCTACCTGTAAGGAGAAGATGATTGGGTTTCGAAATGTTTTGGCTGAAGCCGGGTTGACTGTTTTCTTGCGACTAAGTAGAGGTGATGACCAGATGGCTGCGTGTGGTCAGTTAGGCAAACCCGGTATTGTTCAAGCTCCTTTACTTCGTGTGCCAGATCGATTTCAAATGGCAATGAAATTATGTCTCTAGTTCCTACATCAAGGTTAAAACACATTGGCATCACTCCATTGACGTGGCAAAAATGGTGTGCAGGCTTACGGGCATTGGTTGGAATTTATGCCTGTCTTTAGCTTTCAATTCTTCTTGAAGGGGAAGCTATGTATTCAGCCCCCCTCTTCTTGGAGGCAAAGCTATGCATTCAGCCCCAGATCAAAAAGTTCAACCCTCACGTTTTTGTAAAGTTATTTTCATTCTTTTATGTTCTTTTTAACTTATACCCTTACTTTTGGGAAAAATTTTGGAATTGATATTTAGAACCAATTGTATGTCATTCGTATGGAAATAGTGCGTTTGACAAACTTAAGATAGTTGAACTTGTGATGCAAAACTAGAAAACATAGATTCGTTTCAGGGTTGTGTTAGTACGTTATTTGAGTTTAGATAGATATATGATAGACCCCTATCTTACATAAGTACAGCAGAAGAGAGAAAAATGAGGAACGCGTGCATATGAATGACACGCGAGAATTGACAAAGGGAAGGGCTAGTAGTTCGTATAAATAAAAGTTAGTAAGTGGGAAAGTCGGTTATGTTTTGAATTTAGAGATATCTTTTTGTTCTTCCTTGAAAGAAATTTTGACATTGTAGCAAGGAATTCATTCCTATATTATCATCGATAATAATTGAAATTTCATACTACATCCGAC

Coding sequence (CDS)

ATGGCCGCTTGCTGTTCCTGGAAAACCATACCAATTTCCTCCTCTTCCGCTCGAGGTCTTCTTCACCGTTCCTCCTCTTCTCCCTCTGCATCTCATTTTGTGTCCAATCCTACTATGTCTGGCGGACTTCCTTCTGCAAAGCCGCCCGCATCTTCCCGCTTCTCTGTTCATAGGTTAACCAACTTCAGGCTTCCAGTGGAGTTAGCAAGCATGCAGTCTCTAATGCCATTGCGCAGTGTTACTGCTTCTCCCTTGTTTACTTCGTTGCTTTCCTTCCACAACAACAGTTGGGGTTGTCTATCTAAAGCTATGCCTGAGGAAAAAGAAATCTTGAACGCTGATTTCAACTCCAAGATGCTTCTAAAGGGCCTGTCTTACACCGAACTTGAGAAATGGGTTCAAGCTCAAGGATACAGACCTGGCCAAGCTTTAATGCTGTGGAAACGTCTTTATGGGGATAACATTTGGGCACATACCGGTGATGAATTAGAAGGGTTAAACAAGGATTTTAAGAAAATGTTGATTGAAAACGCTGAGTTCAGGGCATTGTCTTTGAGGGAAATTCTCCCTTCATGTGATGGAACGAGGAAGATTTTGTTCAATCTGGAAGATGGCCTGATAATAGAAACTGTTGTTATACCTTGCGATAGAGGCAGGACCACTGTTTGCGTTTCAAGTCAAGTGGGTTGTGCCATGAACTGTCAATTCTGCTACACCGGCAGGATGGGCCTAAAGAGACACCTGACTGCTGCTGAGATAGTAGAACAGGCAGTTTTTGCAAGGCGTTTGCTTACCAGTGAAGTGGGTTTAATTACTAATGTTGTGTTTATGGGAATGGGAGAGCCACTTCACAACATTGACAATGTCATTAAAGCTGTAAATATAATGGTTCATGAACAAGGACTTCATTTCAGTCCACGCAAGGTCACTGTTTCAACCAGTGGACTTGTTCCCCAGCTGAAACGTTTCCTGAATGAATGTAACTGTGCTTTAGCTGTTAGTTTGAATGCAACTACTGATGAGGTTAGGAATTGGATCATGCCAATAAACCGAAAGTATAAGTTAGGCTTGCTTCTTCAAACTTTACGGGAGGAACTTCGTCGCAAGCACAAGTACAAGGTTCTTTTTGAATATGTGATGCTTGCTGGGGTTAATGATAGCATTGAAGATGCAAAGAGGATCGTTGATCTTGTCCAGGGTATTCCATGCAAGATTAACCTTATTTCATTTAATCCACATTGTGGATCTCAATTTAGACCTACCTGTAAGGAGAAGATGATTGGGTTTCGAAATGTTTTGGCTGAAGCCGGGTTGACTGTTTTCTTGCGACTAAGTAGAGGTGATGACCAGATGGCTGCGTGTGGTCAGTTAGGCAAACCCGGTATTGTTCAAGCTCCTTTACTTCGTGTGCCAGATCGATTTCAAATGGCAATGAAATTATGTCTCTAG

Protein sequence

MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLTNFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRRKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKLCL

Homology

[Close]

BLAST of CsGy4G025780 vs. NCBI nr
Match: XP_004145570.1 (PREDICTED: uncharacterized protein LOC101210124 [Cucumis sativus] >KGN55566.1 hypothetical protein Csa_4G667190 [Cucumis sativus])

HSP 1 Score: 965.7 bits (2495), Expect = 5.9e-278
Identity = 481/482 (99.79%), Postives = 481/482 (99.79%), Query Frame = 0


Query: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60
           MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT
Sbjct: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60

Query: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120
           NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML
Sbjct: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120

Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF
Sbjct: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
           RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG
Sbjct: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
           RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ
Sbjct: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ
Sbjct: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360

Query: 361 TLREELRRKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
           TLREELR KHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP
Sbjct: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480
           TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL
Sbjct: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480

Query: 481 CL 483
           CL
Sbjct: 481 CL 482

[Close]

BLAST of CsGy4G025780 vs. NCBI nr
Match: XP_008453050.1 (PREDICTED: dual-specificity RNA methyltransferase RlmN isoform X1 [Cucumis melo])

HSP 1 Score: 924.9 bits (2389), Expect = 1.2e-265
Identity = 464/481 (96.47%), Postives = 469/481 (97.51%), Query Frame = 0


Query: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60
           MAACCSWKTIPISSSSAR LLHR SSSPSASHFVS PTMSGGL SA+P ASSRFSV RLT
Sbjct: 1   MAACCSWKTIPISSSSARALLHRPSSSPSASHFVSIPTMSGGLHSARPAASSRFSVQRLT 60

Query: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120
           NF LPVELASMQSLMPLRSVTAS LFTSLLSFHNNS  CLSKAMPEEKEILN+DFNSKML
Sbjct: 61  NFSLPVELASMQSLMPLRSVTASALFTSLLSFHNNSRRCLSKAMPEEKEILNSDFNSKML 120

Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENA+F
Sbjct: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAKF 180

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
           RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG
Sbjct: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
           RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKA NIMVHEQ
Sbjct: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAANIMVHEQ 300

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ
Sbjct: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360

Query: 361 TLREELRRKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
           TLREELR KHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP
Sbjct: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480
           TCKEKMIGFRNVLAE+GLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAM+L
Sbjct: 421 TCKEKMIGFRNVLAESGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMEL 480

Query: 481 C 482
           C
Sbjct: 481 C 481

[Close]

BLAST of CsGy4G025780 vs. NCBI nr
Match: XP_022996536.1 (uncharacterized protein LOC111491756 isoform X2 [Cucurbita maxima] >XP_023546953.1 uncharacterized protein LOC111805899 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 864.8 bits (2233), Expect = 1.4e-247
Identity = 436/480 (90.83%), Postives = 452/480 (94.17%), Query Frame = 0


Query: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60
           MAAC +WKT+ ISSSSAR LL RSSSSPSASH VS PTMS  LPSAKP ASSRFSV +LT
Sbjct: 1   MAACSTWKTLRISSSSARTLLQRSSSSPSASHLVSKPTMSAPLPSAKPSASSRFSVPKLT 60

Query: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120
           NFRLPVEL+S+QSLMPL S TAS LFTSLLS HNNSWGCLS+AMPE+KEIL+ D  SKML
Sbjct: 61  NFRLPVELSSVQSLMPLHSATASALFTSLLSLHNNSWGCLSEAMPEKKEILHTD--SKML 120

Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           LKGLSYTELEKWV+A+GYRPGQALMLWKRLYGDN+WAH+GDELEGLNKDFKKMLIE AEF
Sbjct: 121 LKGLSYTELEKWVKARGYRPGQALMLWKRLYGDNVWAHSGDELEGLNKDFKKMLIEKAEF 180

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
           RALSLREILPS DGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG
Sbjct: 181 RALSLREILPSSDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
           RMGLKRHLTAAEIVEQAVFARRLLT EVGLITNVVFMGMGEPLHNIDNVIKA NIMV EQ
Sbjct: 241 RMGLKRHLTAAEIVEQAVFARRLLTCEVGLITNVVFMGMGEPLHNIDNVIKAANIMVDEQ 300

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           GLHFSPRKVTVSTSGLVPQLKRFL++CNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ
Sbjct: 301 GLHFSPRKVTVSTSGLVPQLKRFLHDCNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360

Query: 361 TLREELRRKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
           TLREELR KH YKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP
Sbjct: 361 TLREELRCKHNYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480
           TCKEKMI FRNVLA AGLTV LRLSRGDDQMAACGQLGKPG +QAPLLRVPD+FQMAMKL
Sbjct: 421 TCKEKMIEFRNVLAAAGLTVLLRLSRGDDQMAACGQLGKPGTIQAPLLRVPDQFQMAMKL 478

[Close]

BLAST of CsGy4G025780 vs. NCBI nr
Match: XP_008453051.1 (PREDICTED: dual-specificity RNA methyltransferase RlmN isoform X2 [Cucumis melo])

HSP 1 Score: 813.9 bits (2101), Expect = 2.9e-232
Identity = 402/411 (97.81%), Postives = 406/411 (98.78%), Query Frame = 0


Query: 71  MQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKMLLKGLSYTELE 130
           MQSLMPLRSVTAS LFTSLLSFHNNS  CLSKAMPEEKEILN+DFNSKMLLKGLSYTELE
Sbjct: 1   MQSLMPLRSVTASALFTSLLSFHNNSRRCLSKAMPEEKEILNSDFNSKMLLKGLSYTELE 60

Query: 131 KWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEFRALSLREILP 190
           KWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENA+FRALSLREILP
Sbjct: 61  KWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAKFRALSLREILP 120

Query: 191 SCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTA 250
           SCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTA
Sbjct: 121 SCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTA 180

Query: 251 AEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQGLHFSPRKVT 310
           AEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKA NIMVHEQGLHFSPRKVT
Sbjct: 181 AEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAANIMVHEQGLHFSPRKVT 240

Query: 311 VSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRRKH 370
           VSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELR KH
Sbjct: 241 VSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKH 300

Query: 371 KYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFR 430
           KYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFR
Sbjct: 301 KYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFR 360

Query: 431 NVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKLC 482
           NVLAE+GLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAM+LC
Sbjct: 361 NVLAESGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMELC 411

[Close]

BLAST of CsGy4G025780 vs. NCBI nr
Match: XP_022996535.1 (uncharacterized protein LOC111491756 isoform X1 [Cucurbita maxima])

HSP 1 Score: 714.9 bits (1844), Expect = 1.8e-202
Identity = 372/450 (82.67%), Postives = 390/450 (86.67%), Query Frame = 0


Query: 33  FVSNPTMSGGLPSAKPPASSRFSVHRLTNFRL--PVELASMQSLMPLRSVTASPLFTSLL 92
           F   P+M+  +      A S F    + + RL  P+ L S  S    R  TAS      L
Sbjct: 5   FFPKPSMASSI-----LAPSHFYSLSIPSARLCPPLHLISFLSSAGRRFTTASSASPKPL 64

Query: 93  SFHNNSWGCLSKAMPEEKEILNADFNSKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRL 152
              ++S    S  MPE+KEIL+ D  SKMLLKGLSYTELEKWV+A+GYRPGQALMLWKRL
Sbjct: 65  FALDDSSPDFS--MPEKKEILHTD--SKMLLKGLSYTELEKWVKARGYRPGQALMLWKRL 124

Query: 153 YGDNIWAHTGDELEGLNKDFKKMLIENAEFRALSLREILPSCDGTRKILFNLEDGLIIET 212
           YGDN+WAH+GDELEGLNKDFKKMLIE AEFRALSLREILPS DGTRKILFNLEDGLIIET
Sbjct: 125 YGDNVWAHSGDELEGLNKDFKKMLIEKAEFRALSLREILPSSDGTRKILFNLEDGLIIET 184

Query: 213 VVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGL 272
           VVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLT EVGL
Sbjct: 185 VVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTCEVGL 244

Query: 273 ITNVVFMGMGEPLHNIDNVIKAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCA 332
           ITNVVFMGMGEPLHNIDNVIKA NIMV EQGLHFSPRKVTVSTSGLVPQLKRFL++CNCA
Sbjct: 245 ITNVVFMGMGEPLHNIDNVIKAANIMVDEQGLHFSPRKVTVSTSGLVPQLKRFLHDCNCA 304

Query: 333 LAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRRKHKYKVLFEYVMLAGVNDSIED 392
           LAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELR KH YKVLFEYVMLAGVNDSIED
Sbjct: 305 LAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKHNYKVLFEYVMLAGVNDSIED 364

Query: 393 AKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQ 452
           AKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMI FRNVLA AGLTV LRLSRGDDQ
Sbjct: 365 AKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIEFRNVLAAAGLTVLLRLSRGDDQ 424

Query: 453 MAACGQLGKPGIVQAPLLRVPDRFQMAMKL 481
           MAACGQLGKPG +QAPLLRVPD+FQMAMKL
Sbjct: 425 MAACGQLGKPGTIQAPLLRVPDQFQMAMKL 445

[Close]

BLAST of CsGy4G025780 vs. TAIR10
Match: AT1G60230.1 (Radical SAM superfamily protein)

HSP 1 Score: 595.1 bits (1533), Expect = 3.8e-170
Identity = 298/427 (69.79%), Postives = 343/427 (80.33%), Query Frame = 0


Query: 69  ASMQSLMPLRSVTASPLFTSLLSFHNN---SWGCLSKA-------------MPEEKEILN 128
           A+    + L S   S   T+ + FH +   S+ C S +              P  K  + 
Sbjct: 29  AAFPGTLTLPSPLLSDRLTNSILFHESRSLSFSCFSSSSXSSAAYLPSLEEYPSAKGSVK 88

Query: 129 ADFNSKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKK 188
            D N K++LKG++Y  L++WVQ+ G+RPGQALMLWKRLY DNIWA+  DELEGLNKD K+
Sbjct: 89  RDDNQKVVLKGMTYASLQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKR 148

Query: 189 MLIENAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAM 248
           M+ E+AEF ALS ++I  + DGTRKILF L+DGL+IETVVIPCDRGRTTVCVSSQVGCAM
Sbjct: 149 MISEHAEFGALSFKDIRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAM 208

Query: 249 NCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKA 308
           NCQFCYTGRMGLKR+LT AEIVEQAV+ARRLL+ EVG ITNVVFMGMGEP HNIDNVIKA
Sbjct: 209 NCQFCYTGRMGLKRNLTTAEIVEQAVYARRLLSHEVGSITNVVFMGMGEPFHNIDNVIKA 268

Query: 309 VNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRK 368
            NIMV E GLHFSPRKVTVSTSGLVPQLKRFL E NCALAVSLNATTDEVRNWIMPINRK
Sbjct: 269 ANIMVDENGLHFSPRKVTVSTSGLVPQLKRFLRESNCALAVSLNATTDEVRNWIMPINRK 328

Query: 369 YKLGLLLQTLREELRRKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNP 428
           YKL LLL+TLRE L  +HKYKVLFEYVMLAGVNDS++DA+R+V+LVQGIPCKINLI FNP
Sbjct: 329 YKLSLLLETLREGLSSRHKYKVLFEYVMLAGVNDSMDDARRLVELVQGIPCKINLIQFNP 388

Query: 429 HCGSQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPD 480
           H GSQF  T ++KMI FRNVLAE G TV +R SRG+DQMAACGQLG  G VQAP++RVP+
Sbjct: 389 HSGSQFIQTEEDKMIKFRNVLAEGGCTVLMRFSRGNDQMAACGQLGMIGAVQAPVMRVPE 448

[Close]

BLAST of CsGy4G025780 vs. TAIR10
Match: AT3G19630.1 (Radical SAM superfamily protein)

HSP 1 Score: 191.0 bits (484), Expect = 1.7e-48
Identity = 126/361 (34.90%), Postives = 190/361 (52.63%), Query Frame = 0


Query: 127 TELEKWVQAQGYRPGQALMLWKRLY--GDNIWAHTGDELEGLNKDFKKMLIENAEFRALS 186
           +E++   ++ G  P  A+ +WK +    D +W    DE+  L      +L    +     
Sbjct: 10  SEIKSEFESAGINPKFAIQIWKYVIQNPDCVW----DEIPSLPSAAYSLLHSKFKTXXXX 69

Query: 187 LREILPSCDG-TRKILFNLEDGLIIETVVIPCDRG-------------RTTVCVSSQVGC 246
                   DG T K+L  L++G  +E VV+  D               R+T+C+SSQVGC
Sbjct: 70  XXXXXXXSDGTTSKLLIKLQNGAFVEAVVMRYDTRLGMLGGKPRPGGIRSTLCISSQVGC 129

Query: 247 AMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVI 306
            M C FC TG MG K +LT+ EIVEQ V A R+       I N+VFMGMGEPL+N + V+
Sbjct: 130 KMGCTFCATGTMGFKSNLTSGEIVEQLVHASRIAD-----IRNIVFMGMGEPLNNYNAVV 189

Query: 307 KAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFLNEC-NCALAVSLNATTDEVRNWIMPI 366
           +AV +M++ Q    SP+++T+ST G+V  + +  N+    +LAVSL+A   E+R  IMP 
Sbjct: 190 EAVRVMLN-QPFQLSPKRITISTVGIVHAINKLHNDLPGVSLAVSLHAPVQEIRCQIMPA 249

Query: 367 NRKYKLGLLLQTLREELRRKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLIS 426
            R + L  L+  L +  ++  + K+  EY+ML GVND  + A  + +L++     INLI 
Sbjct: 250 ARAFPLQKLMDAL-QTFQKNSQQKIFIEYIMLDGVNDQEQHAHLLGELLKTFQVVINLIP 309

Query: 427 FNP-HCGSQFRPTCKEKMIGFRNVLAEA-GLTVFLRLSRGDDQMAACGQL--GKPGIVQA 467
           FNP    SQF  +  + +  F+ +L E   +   +R   G D   ACGQL   +P I + 
Sbjct: 310 FNPIGSTSQFETSSIQGVSRFQKILRETYKIRTTIRKEMGQDISGACGQLVVNQPDIKKT 359

[Close]

BLAST of CsGy4G025780 vs. TAIR10
Match: AT2G39670.2 (Radical SAM superfamily protein)

HSP 1 Score: 185.3 bits (469), Expect = 9.1e-47
Identity = 125/369 (33.88%), Postives = 201/369 (54.47%), Query Frame = 0


Query: 120 LLKGLSYTELEK------WVQAQGYRPGQA-LMLWKRLYGDNIWAHTGDELEGLNKDFKK 179
           +L G+S  EL++       +  +GYR  Q   +++KR        +  ++   L   F+K
Sbjct: 63  VLIGMSEPELQELAINLVLIFQEGYRGKQLHHLIYKRK------VNKVEDFSNLPLTFRK 122

Query: 180 MLIENA-EFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPC---DRG--RTTVCVSS 239
            L++   +     + + + + DGT K+L  LED L+IETV IP    ++G  R T CVSS
Sbjct: 123 GLVDGGFKVGRSPIYQTVTATDGTIKLLLKLEDNLLIETVGIPVQDDEKGITRLTACVSS 182

Query: 240 QVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNI 299
           QVGC + C FC TG+ G  R+L   EI+EQ +    +    V   TNVVFMGMGEP+ N+
Sbjct: 183 QVGCPLRCSFCATGKGGFSRNLQRHEIIEQVLAIEDVFKHRV---TNVVFMGMGEPMLNL 242

Query: 300 DNVIKAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFL-NECNCALAVSLNATTDEVRNW 359
            +V+ A   +   + +    R +T+ST G+   +K+   ++    LAVSL+A    +R  
Sbjct: 243 KSVLDAHRCL--NKDIEIGQRMITISTVGVPNTIKKLASHKLQSTLAVSLHAPNQSLREK 302

Query: 360 IMPINRKYKLGLLLQTLREELRRKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQ--GIPC 419
           I+P  + Y L  +++  R+  +  ++ +V FEY +LAGVND +E A  + +L++  G   
Sbjct: 303 IVPSAKAYPLEAIMKDCRDYFQETNR-RVSFEYALLAGVNDQVEHAVELAELLREWGKTY 362

Query: 420 KINLISFNPHCGSQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIV 473
            +NLI +NP  GS+++   K+ ++ F   L    +T  +R +RG D  AACGQL +    
Sbjct: 363 HVNLIPYNPIEGSEYQRPYKKAVLAFAAALESRKITASVRQTRGLDASAACGQL-RNKFQ 418

[Close]

BLAST of CsGy4G025780 vs. TAIR10
Match: AT1G70350.1 (unknown protein)

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-10
Identity = 47/102 (46.08%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60
           MAA    + +  SSSS + L  RSS++ SAS    +  ++ G  S+   +S+R S+ RLT
Sbjct: 1   MAANGVRRALQASSSSGKILFGRSSAATSASKIGKSAGIAFGNGSS---SSTRPSLRRLT 60

Query: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSK 103
             R+PVEL++  SL+PL SVTAS L TSLLS  N +W CLS+
Sbjct: 61  FSRVPVELSAGISLIPLHSVTASALLTSLLSLSNQNWSCLSE 99

[Close]

BLAST of CsGy4G025780 vs. Swiss-Prot
Match: sp|Q74E53|RLMN_GEOSL (Dual-specificity RNA methyltransferase RlmN OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=rlmN PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 3.6e-77
Identity = 162/337 (48.07%), Postives = 215/337 (63.80%), Query Frame = 0


Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           +KGLS  ELE+++  +G    +A  ++K LY     A +  E+  L K+ ++ L E A  
Sbjct: 7   IKGLSIDELERFLLGKGKERYRARQIFKWLYQRG--ATSFAEMTDLAKELRRDLEETARI 66

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
             LS   +  S DGTRK LF L+DG  +E+V+IP +  R T+C+SSQVGCAM C+FC TG
Sbjct: 67  STLSPEALEISRDGTRKYLFRLDDGCSVESVLIP-EEDRNTLCISSQVGCAMACEFCLTG 126

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
              L R+LT AEIV Q    +R +      + N+VFMGMGEPL N+DNVI+A+ IM+H+ 
Sbjct: 127 TFRLTRNLTTAEIVNQVCAVQRDVP-----VRNIVFMGMGEPLANLDNVIRALQIMLHDD 186

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           GL FS R++TVST+GLVP+++R        LAVSLNATTDE+R+ IMPINRKY L +LL 
Sbjct: 187 GLQFSTRRITVSTAGLVPEMERLGRSVTVNLAVSLNATTDELRDRIMPINRKYPLAVLLD 246

Query: 361 TLREELRRKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
             R       + K+  EYV+L GVND+++DAKR+V L+  IP KINLI FN H G  FR 
Sbjct: 247 ACR-RFPLPGRRKITIEYVLLGGVNDTLDDAKRLVRLLSDIPSKINLIPFNEHEGCSFRS 306

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQL 458
             ++ +  F   L +   TV  R SRG D  AACGQL
Sbjct: 307 PSQDAIDRFHRYLLDKHFTVITRSSRGADISAACGQL 334

[Close]

BLAST of CsGy4G025780 vs. Swiss-Prot
Match: sp|Q39S71|RLMN_GEOMG (Dual-specificity RNA methyltransferase RlmN OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) OX=269799 GN=rlmN PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 5.2e-76
Identity = 164/342 (47.95%), Postives = 215/342 (62.87%), Query Frame = 0


Query: 116 NSKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLI 175
           N K+ +K L+  +L  ++  +G    +A  ++K LY  +  A +  E+  L KD ++ L 
Sbjct: 3   NGKIDIKNLTLDDLIAFLAGKGKERYRARQIFKWLYQKD--ARSFAEMTDLAKDLRRDLE 62

Query: 176 ENAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQ 235
           E A    L    +  S DGTRK LF LEDG  +E+V+IP +  RTT+C+SSQVGCAM C+
Sbjct: 63  ETAVISDLEPEAMEVSRDGTRKYLFRLEDGNTVESVLIP-EEDRTTLCISSQVGCAMACE 122

Query: 236 FCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNI 295
           FC TG   L R+LTA EIV Q    RR +      + N+VFMGMGEPL N+DNV+KA+ I
Sbjct: 123 FCLTGTFRLTRNLTAGEIVNQICAVRRDVP-----VRNIVFMGMGEPLANLDNVVKALKI 182

Query: 296 MVHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKL 355
           ++H+ GL FS R+VTVSTSGLVP+++R   E    LAVSLNATTDEVR+ IMP+NR+Y L
Sbjct: 183 ILHDDGLQFSTRRVTVSTSGLVPEMERLGREVTVNLAVSLNATTDEVRDRIMPVNRRYPL 242

Query: 356 GLLLQTLREELRRKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCG 415
            LLL   R       + K+  EYVM+ G+NDS+EDAKR+V L+  I  KINLI FN H G
Sbjct: 243 RLLLDACR-SYPLPGRRKITIEYVMIKGLNDSLEDAKRLVKLLSDISSKINLIPFNEHDG 302

Query: 416 SQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQL 458
             F+   +  +  F + L     TV  R SRG D  AACGQL
Sbjct: 303 CSFKSPDQGAIDVFHSYLLSKHFTVITRSSRGSDISAACGQL 335

[Close]

BLAST of CsGy4G025780 vs. Swiss-Prot
Match: sp|A0LQM1|RLMN_SYNFM (Dual-specificity RNA methyltransferase RlmN OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) OX=335543 GN=rlmN PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 9.8e-75
Identity = 152/337 (45.10%), Postives = 218/337 (64.69%), Query Frame = 0


Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           +K  +  ELE+WVQ  G R  +A  L++ +YG  +   +  E   L++ F+  L    E 
Sbjct: 6   VKDFTLPELEEWVQGIGERSFRARQLFRHVYGRGV--RSWSECSDLSRMFRVQLEHGVEL 65

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
            ALS+ +   + DGT K LF L DG  IE V+IP D  R+T+CVSSQVGCA+ C+FC TG
Sbjct: 66  DALSVLKKEQADDGTSKYLFGLRDGHSIEAVLIP-DLPRSTLCVSSQVGCALGCKFCLTG 125

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
            +G KR+L+AAEIV+Q    +R L S    ITN+VFMGMGEPL N+D+V++A+ ++    
Sbjct: 126 SLGFKRNLSAAEIVDQVCQVQRDLGSR-SRITNIVFMGMGEPLANLDSVLRAIRVIAEPN 185

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           G+ FS R++T+ST+GLVPQL+R   E    LAVSL+A  +E+R  +MP+NR Y L +L+ 
Sbjct: 186 GMAFSHRRITLSTAGLVPQLRRLGRESPVNLAVSLHAAENELRAELMPVNRTYPLEVLMA 245

Query: 361 TLREELRRKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
             RE      K ++ FEY++L G+ND  + AK++V L+ GI  K+NL+ FNPH GS FR 
Sbjct: 246 ACREYPLPPRK-RITFEYILLDGINDDPKQAKQLVKLLHGIRAKVNLMPFNPHPGSVFRK 305

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQL 458
             +++++ F+  L  A +T  +R SRG +  AACGQL
Sbjct: 306 PSEQRVLAFQEALQNARITTHVRRSRGGEIGAACGQL 337

[Close]

BLAST of CsGy4G025780 vs. Swiss-Prot
Match: sp|A1AL40|RLMN_PELPD (Dual-specificity RNA methyltransferase RlmN OS=Pelobacter propionicus (strain DSM 2379 / NBRC 103807 / OttBd1) OX=338966 GN=rlmN PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.3e-74
Identity = 165/348 (47.41%), Postives = 214/348 (61.49%), Query Frame = 0


Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           LK L+   LE++++ QG    +A  ++K +Y  +  A +  E+  ++KD +  L   A  
Sbjct: 7   LKNLTLPALEQFLRGQGKERFRATQVFKWIYQHD--ARSFQEMTNISKDLRAELEAKAYI 66

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
             L    +    DGTRK LF LEDG  +E+V+IP D GR T+C+SSQVGCAM C FC TG
Sbjct: 67  SNLEPEAVEVGGDGTRKYLFGLEDGNSVESVLIP-DEGRNTLCISSQVGCAMGCAFCLTG 126

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
              L R+LT AEIV Q +  RR +      I N+V MGMGEPLHN+DNVI A++IM+   
Sbjct: 127 TFRLTRNLTTAEIVNQIMAVRRDVE-----IRNIVMMGMGEPLHNLDNVIPAIHIMIDGN 186

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNEC-NCALAVSLNATTDEVRNWIMPINRKYKLGLLL 360
           GL  S R+VTVST GL P+++R   E  N  LAVSLNATTDE+R+ IMPINR+Y L  LL
Sbjct: 187 GLQLSNRRVTVSTCGLAPEMERLGRELPNVNLAVSLNATTDELRDRIMPINRRYPLKELL 246

Query: 361 QTLREELRRKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFR 420
              R E     + KV FEYVML G+ND++EDAKR++ L   IP K+NLI FN   G +FR
Sbjct: 247 SACR-EFPLPGRRKVTFEYVMLGGLNDTLEDAKRLLRLTSDIPNKVNLIPFNEFQGCEFR 306

Query: 421 PTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQL-GKPGIVQAP 467
              +  +  F   L +  +TV  R SRG D  AACGQL GK    + P
Sbjct: 307 SPTRAAIDAFHKYLIDRHVTVITRDSRGSDISAACGQLKGKLDAARQP 345

[Close]

BLAST of CsGy4G025780 vs. Swiss-Prot
Match: sp|Q3A2Z4|RLMN_PELCD (Dual-specificity RNA methyltransferase RlmN OS=Pelobacter carbinolicus (strain DSM 2380 / NBRC 103641 / GraBd1) OX=338963 GN=rlmN PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 6.4e-74
Identity = 154/351 (43.87%), Postives = 215/351 (61.25%), Query Frame = 0


Query: 111 LNADFNSKMLLKGLSYTELEKWVQAQG---YRPGQAL-MLWKRLYGDNIWAHTGDELEGL 170
           ++ D ++++ LK  +  EL +++   G   +R GQ +  ++ RL  D       D +  L
Sbjct: 3   VSMDQDTRIDLKNFTLEELTEFLAGMGKERFRAGQVMRWMYHRLVDD------FDAMSDL 62

Query: 171 NKDFKKMLIENAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSS 230
           +K  +  L + A    L+      S DGTRK LF LEDG  IE+V IP D  R T+C+S+
Sbjct: 63  SKVLRAELHQRARISRLTPEATEDSRDGTRKYLFRLEDGETIESVRIPMDDNRATLCIST 122

Query: 231 QVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNI 290
           QVGCAM C FC+TG  GL R+LT  EIV Q   A        G + N+V MGMGEPLHN+
Sbjct: 123 QVGCAMGCVFCHTGSFGLVRNLTPGEIVNQVCAA-----LADGPVNNIVLMGMGEPLHNL 182

Query: 291 DNVIKAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWI 350
           DNV+KA+ I+   QGL +SPRKVT+ST+GLVPQ++         LAVSLNATTDEVRN +
Sbjct: 183 DNVVKALQILYMPQGLDYSPRKVTLSTAGLVPQMQELGKRVRVNLAVSLNATTDEVRNRL 242

Query: 351 MPINRKYKLGLLLQTLREELRRKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKIN 410
           MP+N++Y L  L+   R+      K ++ FEY+++  VNDS +DA+R+V L+ GI  K+N
Sbjct: 243 MPVNQRYPLQQLMAACRQYPLHAKK-RITFEYILIRDVNDSDQDARRLVKLLHGIKAKVN 302

Query: 411 LISFNPHCGSQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQL 458
           +I FN H  S+FR   +E++  F+  L + G+    R S+G D  AACGQL
Sbjct: 303 IIPFNEHSASEFRAPTEERISRFQGYLLDHGMVAIRRASKGQDISAACGQL 341

[Close]

BLAST of CsGy4G025780 vs. TrEMBL
Match: tr|A0A0A0L605|A0A0A0L605_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G667190 PE=4 SV=1)

HSP 1 Score: 965.7 bits (2495), Expect = 3.9e-278
Identity = 481/482 (99.79%), Postives = 481/482 (99.79%), Query Frame = 0


Query: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60
           MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT
Sbjct: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60

Query: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120
           NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML
Sbjct: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120

Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF
Sbjct: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
           RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG
Sbjct: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
           RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ
Sbjct: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ
Sbjct: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360

Query: 361 TLREELRRKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
           TLREELR KHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP
Sbjct: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480
           TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL
Sbjct: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480

Query: 481 CL 483
           CL
Sbjct: 481 CL 482

[Close]

BLAST of CsGy4G025780 vs. TrEMBL
Match: tr|A0A1S3BVB5|A0A1S3BVB5_CUCME (dual-specificity RNA methyltransferase RlmN isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493873 PE=4 SV=1)

HSP 1 Score: 924.9 bits (2389), Expect = 7.6e-266
Identity = 464/481 (96.47%), Postives = 469/481 (97.51%), Query Frame = 0


Query: 1   MAACCSWKTIPISSSSARGLLHRSSSSPSASHFVSNPTMSGGLPSAKPPASSRFSVHRLT 60
           MAACCSWKTIPISSSSAR LLHR SSSPSASHFVS PTMSGGL SA+P ASSRFSV RLT
Sbjct: 1   MAACCSWKTIPISSSSARALLHRPSSSPSASHFVSIPTMSGGLHSARPAASSRFSVQRLT 60

Query: 61  NFRLPVELASMQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKML 120
           NF LPVELASMQSLMPLRSVTAS LFTSLLSFHNNS  CLSKAMPEEKEILN+DFNSKML
Sbjct: 61  NFSLPVELASMQSLMPLRSVTASALFTSLLSFHNNSRRCLSKAMPEEKEILNSDFNSKML 120

Query: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEF 180
           LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENA+F
Sbjct: 121 LKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAKF 180

Query: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240
           RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG
Sbjct: 181 RALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTG 240

Query: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQ 300
           RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKA NIMVHEQ
Sbjct: 241 RMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAANIMVHEQ 300

Query: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360
           GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ
Sbjct: 301 GLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQ 360

Query: 361 TLREELRRKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420
           TLREELR KHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP
Sbjct: 361 TLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRP 420

Query: 421 TCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKL 480
           TCKEKMIGFRNVLAE+GLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAM+L
Sbjct: 421 TCKEKMIGFRNVLAESGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMEL 480

Query: 481 C 482
           C
Sbjct: 481 C 481

[Close]

BLAST of CsGy4G025780 vs. TrEMBL
Match: tr|A0A1S3BV96|A0A1S3BV96_CUCME (dual-specificity RNA methyltransferase RlmN isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493873 PE=4 SV=1)

HSP 1 Score: 813.9 bits (2101), Expect = 1.9e-232
Identity = 402/411 (97.81%), Postives = 406/411 (98.78%), Query Frame = 0


Query: 71  MQSLMPLRSVTASPLFTSLLSFHNNSWGCLSKAMPEEKEILNADFNSKMLLKGLSYTELE 130
           MQSLMPLRSVTAS LFTSLLSFHNNS  CLSKAMPEEKEILN+DFNSKMLLKGLSYTELE
Sbjct: 1   MQSLMPLRSVTASALFTSLLSFHNNSRRCLSKAMPEEKEILNSDFNSKMLLKGLSYTELE 60

Query: 131 KWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEFRALSLREILP 190
           KWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENA+FRALSLREILP
Sbjct: 61  KWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAKFRALSLREILP 120

Query: 191 SCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTA 250
           SCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTA
Sbjct: 121 SCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTA 180

Query: 251 AEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQGLHFSPRKVT 310
           AEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKA NIMVHEQGLHFSPRKVT
Sbjct: 181 AEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAANIMVHEQGLHFSPRKVT 240

Query: 311 VSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRRKH 370
           VSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELR KH
Sbjct: 241 VSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKH 300

Query: 371 KYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFR 430
           KYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFR
Sbjct: 301 KYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFR 360

Query: 431 NVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMKLC 482
           NVLAE+GLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAM+LC
Sbjct: 361 NVLAESGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAMELC 411

[Close]

BLAST of CsGy4G025780 vs. TrEMBL
Match: tr|A0A2I4E6R7|A0A2I4E6R7_9ROSI (uncharacterized protein LOC108986784 OS=Juglans regia OX=51240 GN=LOC108986784 PE=4 SV=1)

HSP 1 Score: 646.7 bits (1667), Expect = 4.0e-182
Identity = 315/364 (86.54%), Postives = 337/364 (92.58%), Query Frame = 0


Query: 117 SKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIE 176
           SK+LLKG+ Y+ELE WVQ QGYRPGQALMLWKRLYG+NIWAH  DELEGLNKDFKKML E
Sbjct: 86  SKVLLKGMKYSELENWVQLQGYRPGQALMLWKRLYGNNIWAHHIDELEGLNKDFKKMLCE 145

Query: 177 NAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQF 236
           NAEF+ LSL+EIL +CDGTRKILF LED L+IETVVIPCDRGRTTVCVSSQVGCAMNCQF
Sbjct: 146 NAEFKVLSLKEILTACDGTRKILFTLEDDLVIETVVIPCDRGRTTVCVSSQVGCAMNCQF 205

Query: 237 CYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIM 296
           CYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVG ITNVVFMGMGEPLHNIDNVIKA  IM
Sbjct: 206 CYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGSITNVVFMGMGEPLHNIDNVIKAAEIM 265

Query: 297 VHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLG 356
           VH+QGL+FSPRKVTVSTSGLVPQL+RFL E NCALAVSLNATTDEVRNWIMPINRKYKLG
Sbjct: 266 VHDQGLYFSPRKVTVSTSGLVPQLRRFLRESNCALAVSLNATTDEVRNWIMPINRKYKLG 325

Query: 357 LLLQTLREELRRKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGS 416
           LLLQTL+EELR KH YKVLFEYVML+GVNDSIEDAKR++DLVQ IPCKINLISFNPH GS
Sbjct: 326 LLLQTLQEELRLKHNYKVLFEYVMLSGVNDSIEDAKRLIDLVQDIPCKINLISFNPHTGS 385

Query: 417 QFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQM 476
           +FRPT + KMI FRNVLAEAG  VFLRLSRGDDQMAACGQLGKPG ++APLLRVP+ FQM
Sbjct: 386 KFRPTSEAKMIEFRNVLAEAGCIVFLRLSRGDDQMAACGQLGKPGAIKAPLLRVPEEFQM 445

Query: 477 AMKL 481
           A+ +
Sbjct: 446 AVNM 449

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BLAST of CsGy4G025780 vs. TrEMBL
Match: tr|A0A2P4M397|A0A2P4M397_QUESU (Dual-specificity rna methyltransferase rlmn OS=Quercus suber OX=58331 GN=CFP56_08851 PE=3 SV=1)

HSP 1 Score: 641.3 bits (1653), Expect = 1.7e-180
Identity = 314/375 (83.73%), Postives = 340/375 (90.67%), Query Frame = 0


Query: 106 EEKEILNADFNSKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEG 165
           EE  +     NSK LLKGL+Y+E E WVQ QGYRPGQALMLWKRLYG++IWAH  DELEG
Sbjct: 70  EEIGVSKNGSNSKTLLKGLTYSEFENWVQLQGYRPGQALMLWKRLYGNDIWAHQIDELEG 129

Query: 166 LNKDFKKMLIENAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVS 225
           LNKDFKKML ENAEF+ALSL+EIL + DGT+KILF LEDG +IETVVIPCDRGRTTVCVS
Sbjct: 130 LNKDFKKMLSENAEFKALSLKEILTASDGTKKILFTLEDGQVIETVVIPCDRGRTTVCVS 189

Query: 226 SQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHN 285
           SQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVG ITNVVFMGMGEPLHN
Sbjct: 190 SQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGSITNVVFMGMGEPLHN 249

Query: 286 IDNVIKAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNW 345
           IDNVIKA +IMVH+QGLHFSPRKVTVSTSGLVPQL+RFL+E NCALAVSLNATTDEVRNW
Sbjct: 250 IDNVIKAADIMVHDQGLHFSPRKVTVSTSGLVPQLRRFLHESNCALAVSLNATTDEVRNW 309

Query: 346 IMPINRKYKLGLLLQTLREELRRKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKI 405
           IMPINRKYKLGLLL+TLREELR K+ YKVLFEYVML+GVNDSIEDAKR++DL++GIPCKI
Sbjct: 310 IMPINRKYKLGLLLETLREELRFKNNYKVLFEYVMLSGVNDSIEDAKRLIDLIEGIPCKI 369

Query: 406 NLISFNPHCGSQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQA 465
           NLISFNPH GSQF+PT   KMI FRNVLAEAG TVFLR SRGDDQMAACGQLG PG +QA
Sbjct: 370 NLISFNPHTGSQFQPTSDAKMIEFRNVLAEAGCTVFLRPSRGDDQMAACGQLGNPGAIQA 429

Query: 466 PLLRVPDRFQMAMKL 481
           PLLRVP +FQ A+ +
Sbjct: 430 PLLRVPKQFQTALNI 444

The following BLAST results are available for this feature:

BLAST of CsGy4G025780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145570.1	5.9e-278	99.79	PREDICTED: uncharacterized protein LOC101210124 [Cucumis sativus] >KGN55566.1 hy...	[more]
XP_008453050.1	1.2e-265	96.47	PREDICTED: dual-specificity RNA methyltransferase RlmN isoform X1 [Cucumis melo]	[more]
XP_022996536.1	1.4e-247	90.83	uncharacterized protein LOC111491756 isoform X2 [Cucurbita maxima] >XP_023546953...	[more]
XP_008453051.1	2.9e-232	97.81	PREDICTED: dual-specificity RNA methyltransferase RlmN isoform X2 [Cucumis melo]	[more]
XP_022996535.1	1.8e-202	82.67	uncharacterized protein LOC111491756 isoform X1 [Cucurbita maxima]	[more]

BLAST of CsGy4G025780 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G60230.1	3.8e-170	69.79	Radical SAM superfamily protein	[more]
AT3G19630.1	1.7e-48	34.90	Radical SAM superfamily protein	[more]
AT2G39670.2	9.1e-47	33.88	Radical SAM superfamily protein	[more]
AT1G70350.1	1.8e-10	46.08	unknown protein	[more]

BLAST of CsGy4G025780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q74E53\|RLMN_GEOSL	3.6e-77	48.07	Dual-specificity RNA methyltransferase RlmN OS=Geobacter sulfurreducens (strain ...	[more]
sp\|Q39S71\|RLMN_GEOMG	5.2e-76	47.95	Dual-specificity RNA methyltransferase RlmN OS=Geobacter metallireducens (strain...	[more]
sp\|A0LQM1\|RLMN_SYNFM	9.8e-75	45.10	Dual-specificity RNA methyltransferase RlmN OS=Syntrophobacter fumaroxidans (str...	[more]
sp\|A1AL40\|RLMN_PELPD	1.3e-74	47.41	Dual-specificity RNA methyltransferase RlmN OS=Pelobacter propionicus (strain DS...	[more]
sp\|Q3A2Z4\|RLMN_PELCD	6.4e-74	43.87	Dual-specificity RNA methyltransferase RlmN OS=Pelobacter carbinolicus (strain D...	[more]

BLAST of CsGy4G025780 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L605\|A0A0A0L605_CUCSA	3.9e-278	99.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G667190 PE=4 SV=1	[more]
tr\|A0A1S3BVB5\|A0A1S3BVB5_CUCME	7.6e-266	96.47	dual-specificity RNA methyltransferase RlmN isoform X1 OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A1S3BV96\|A0A1S3BV96_CUCME	1.9e-232	97.81	dual-specificity RNA methyltransferase RlmN isoform X2 OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A2I4E6R7\|A0A2I4E6R7_9ROSI	4.0e-182	86.54	uncharacterized protein LOC108986784 OS=Juglans regia OX=51240 GN=LOC108986784 P...	[more]
tr\|A0A2P4M397\|A0A2P4M397_QUESU	1.7e-180	83.73	Dual-specificity rna methyltransferase rlmn OS=Quercus suber OX=58331 GN=CFP56_0...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006364	rRNA processing
GO:0070475	rRNA base methylation
GO:0030488	tRNA methylation

Vocabulary: **Molecular Function**
Term	Definition
GO:0008173	RNA methyltransferase activity
GO:0051536	iron-sulfur cluster binding
GO:0003824	catalytic activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **INTERPRO**
Term	Definition
IPR004383	rRNA_lsu_MTrfase_RlmN/Cfr
IPR027492	RNA_MTrfase_RlmN
IPR007197	rSAM
IPR013785	Aldolase_TIM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070475	rRNA base methylation
biological_process	GO:0030488	tRNA methylation
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0008173	RNA methyltransferase activity
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G025780.1	CsGy4G025780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13394	Fer4_14	coord: 229..328 e-value: 1.6E-6 score: 28.1
None	No IPR available	SFLD	SFLDG01062	methyltransferase_(Class_A)	coord: 118..459 e-value: 0.0 score: 381.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..42
None	No IPR available	PANTHER	PTHR30544:SF3	SUBFAMILY NOT NAMED	coord: 80..479
None	No IPR available	CDD	cd01335	Radical_SAM	coord: 229..397 e-value: 9.74507E-9 score: 53.1061
None	No IPR available	SUPERFAMILY	SSF102114	Radical SAM enzymes	coord: 218..435
IPR013785	Aldolase-type TIM barrel	GENE3D	G3DSA:3.20.20.70		coord: 185..448 e-value: 1.7E-100 score: 337.7
IPR007197	Radical SAM	PFAM	PF04055	Radical_SAM	coord: 225..390 e-value: 3.3E-18 score: 66.5
IPR007197	Radical SAM	SFLD	SFLDS00029	Radical_SAM	coord: 225..390 e-value: 2.7E-11 score: 38.7
IPR027492	Dual-specificity RNA methyltransferase RlmN	TIGRFAM	TIGR00048	TIGR00048	coord: 119..457 e-value: 6.7E-102 score: 339.0
IPR004383	Ribosomal RNA large subunit methyltransferase RlmN/Cfr	SFLD	SFLDF00275	adenosine_C2_methyltransferas	coord: 117..459 e-value: 0.0 score: 384.0
IPR004383	Ribosomal RNA large subunit methyltransferase RlmN/Cfr	PANTHER	PTHR30544	23S RRNA METHYLTRANSFERASE	coord: 80..479

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G025780	Csa4G667190	Cucumber (Chinese Long) v2	cgybcuB166
CsGy4G025780	MELO3C017082	Melon (DHL92) v3.5.1	cgybmeB270
CsGy4G025780	CSPI04G27560	Wild cucumber (PI 183967)	cgybcpiB169
CsGy4G025780	MELO3C017082.2	Melon (DHL92) v3.6.1	cgybmedB267
CsGy4G025780	CsaV3_4G037870	Cucumber (Chinese Long) v3	cgybcucB171

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G025780	Cucurbita pepo (Zucchini)	cgybcpeB570
CsGy4G025780	Watermelon (97103) v1	cgybwmB329
CsGy4G025780	Silver-seed gourd	carcgybB1030
CsGy4G025780	Watermelon (97103) v2	cgybwmbB267
CsGy4G025780	Wax gourd	cgybwgoB397
CsGy4G025780	Wax gourd	cgybwgoB398