CsaV3_4G037730 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G037730
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chr4 : 26337902 .. 26339297 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCTAGTTCAGCCACACACTCCAGCTTCTTCAATTTCATCTTCATCCGCTTCATTGTTCGGAACTTATCTTCAACAATTCCGTCCGCTCACCACAACCCTTAATCTTCGAAGCAACCACTCTATCTCTCATCGTTCCACCTGCAGAGCTTCCTGGCAGGAGGTTTGTAAGAAAGTTATCTACCTGTATCCAACTCTTATCTGATTTCTGACTCCTTCTTTTCATCCTGCTCTAGCTTGCAGGTGTTCTAATATTCTCTGCAATTCCTTTCACGGCGGTTAAAGCCATTGCTAATAGCCCACTTGGAGGGTCGCTCCAGAGACAATTGGAAAAGAAGAAAAATTCTGCCGTAGCCAACTCTTCCAAGTTCAAGGCTCTTGCTGAGGAGGCTAGAAAAGATAGGTAATCGGGTAAGCTTATTTATTGGTGCTCAAATCTTTCTATCTTAAATTCGTAGTTATTATTGACCTGTTCATGTTCATCCAATTATTAAACCTGCTACATTTTCCCTTAAACTGGCCGGTCATTTACACCGTCGAAAACTGTTCCGAGGACGCACGAATGATTTGGTGACGTCAATGCCAAGTTAGACTACTCAGTTTTTTAGAATAATTGCATACACGTTGAATTAAGATCTGTCTAGTACATATAGGACTTCGAGCTGCATGGTAGTATCAGTTATGTTCAAAGTGAGTAGATCGTGACCCAGAAAACGATTGTTAAAGAAGATCGTAGAAACCAACGAGTCCCTGGTTAAACAACTTATTGGAATCATTTTGAACTTGCTTCAGGTATGCACATAATATCCTTAAGCTCGAAGTTCGTTAAAACGCACAAACTAAAGGCTGTTCTAGGCAACACAATTGAGACATAATCAACTGGTTTCATTGTCATGGAAACTTGGTCTGTTGGAACAGTGTAAATAGTAACCGCAGAGGCAATTATCCAGTAACTGTTTAAATTAGGCTATGATTTTGTAGCATACAGTAACAAGTACTTGAAACATGAATTTGGGCACTGGAACCACCATTCTTTACCAACTAGATGACAGTTAAACTTTCTTTTGAACAAGATACAAAATGTGACAATCAAACTCAGCGATTCATTGCTGGTAAGTGCTTGCATTAAGAGACTGGATGCCTTTCATGTAGCTGCTTTGGCCGGAAGGTACGTATTCCATCACAGCCTCCTCAATCTCCACCTCATTCTACCCAGGCCTCCACGGTCGCATTCAGATCTGTTCAGTGCTCATATTTGTATCATTCTCTTCACTCACCTTTCTCACTCTCCTGCAAATATGCTAAATCTGTGGTTAACTGCTGCCACCATTGAACTTGTTATGCCACCTGAGAGGGTTCTGATTCATCTAGAAAGTTTCCTCCCAAAGTTTTGA

mRNA sequence

ATGGCGCTAGTTCAGCCACACACTCCAGCTTCTTCAATTTCATCTTCATCCGCTTCATTGTTCGGAACTTATCTTCAACAATTCCGTCCGCTCACCACAACCCTTAATCTTCGAAGCAACCACTCTATCTCTCATCGTTCCACCTGCAGAGCTTCCTGGCAGGAGCTTGCAGGTGTTCTAATATTCTCTGCAATTCCTTTCACGGCGGTTAAAGCCATTGCTAATAGCCCACTTGGAGGGTCGCTCCAGAGACAATTGGAAAAGAAGAAAAATTCTGCCGTAGCCAACTCTTCCAAGTTCAAGGCTCTTGCTGAGGAGGCTAGAAAAGATAGCGATTCATTGCTGGTAAGTGCTTGCATTAAGAGACTGGATGCCTTTCATGTAGCTGCTTTGGCCGGAAGGTACGTATTCCATCACAGCCTCCTCAATCTCCACCTCATTCTACCCAGGCCTCCACGGTCGCATTCAGATCTGTTCAGTGCTCATATTTGTATCATTCTCTTCACTCACCTTTCTCACTCTCCTGCAAATATGCTAAATCTGTGGTTAACTGCTGCCACCATTGAACTTGTTATGCCACCTGAGAGGGTTCTGATTCATCTAGAAAGTTTCCTCCCAAAGTTTTGA

Coding sequence (CDS)

ATGGCGCTAGTTCAGCCACACACTCCAGCTTCTTCAATTTCATCTTCATCCGCTTCATTGTTCGGAACTTATCTTCAACAATTCCGTCCGCTCACCACAACCCTTAATCTTCGAAGCAACCACTCTATCTCTCATCGTTCCACCTGCAGAGCTTCCTGGCAGGAGCTTGCAGGTGTTCTAATATTCTCTGCAATTCCTTTCACGGCGGTTAAAGCCATTGCTAATAGCCCACTTGGAGGGTCGCTCCAGAGACAATTGGAAAAGAAGAAAAATTCTGCCGTAGCCAACTCTTCCAAGTTCAAGGCTCTTGCTGAGGAGGCTAGAAAAGATAGCGATTCATTGCTGGTAAGTGCTTGCATTAAGAGACTGGATGCCTTTCATGTAGCTGCTTTGGCCGGAAGGTACGTATTCCATCACAGCCTCCTCAATCTCCACCTCATTCTACCCAGGCCTCCACGGTCGCATTCAGATCTGTTCAGTGCTCATATTTGTATCATTCTCTTCACTCACCTTTCTCACTCTCCTGCAAATATGCTAAATCTGTGGTTAACTGCTGCCACCATTGAACTTGTTATGCCACCTGAGAGGGTTCTGATTCATCTAGAAAGTTTCCTCCCAAAGTTTTGA

Protein sequence

MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDSDSLLVSACIKRLDAFHVAALAGRYVFHHSLLNLHLILPRPPRSHSDLFSAHICIILFTHLSHSPANMLNLWLTAATIELVMPPERVLIHLESFLPKF

Homology

[Close]

BLAST of CsaV3_4G037730 vs. NCBI nr
Match: KGN55549.1 (hypothetical protein Csa_4G664560 [Cucumis sativus])

HSP 1 Score: 318.2 bits (814), Expect = 2.1e-83
Identity = 180/232 (77.59%), Postives = 180/232 (77.59%), Query Frame = 0


Query: 1   MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 60
           MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL
Sbjct: 1   MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 60

Query: 61  IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKD---------- 120
           IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKD          
Sbjct: 61  IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDRKRLLKKIVE 120

Query: 121 --------------------------SDSLLVSACIKRLDAFHVAALAGRYVFHHSLLNL 180
                                     SDSLLVSACIKRLDAFHVAALAG           
Sbjct: 121 TNESLVKQLIGIILNLLQIQNVTIKLSDSLLVSACIKRLDAFHVAALAG----------- 180

Query: 181 HLILPRPPRSHSDLFSAHICIILFTHLSHSPANMLNLWLTAATIELVMPPER 197
                RPPRSHSDLFSAHICIILFTHLSHSPANMLNLWLTAATIELVMPPER
Sbjct: 181 -----RPPRSHSDLFSAHICIILFTHLSHSPANMLNLWLTAATIELVMPPER 216

[Close]

BLAST of CsaV3_4G037730 vs. NCBI nr
Match: XP_011654292.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like isoform X2 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 4.8e-51
Identity = 112/115 (97.39%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 1   MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 60
           MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL
Sbjct: 1   MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 60

Query: 61  IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDSDSLL 116
           IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDS  +L
Sbjct: 61  IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDSFEIL 115

[Close]

BLAST of CsaV3_4G037730 vs. NCBI nr
Match: XP_004145567.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 8.2e-51
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 60
           MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL
Sbjct: 1   MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 60

Query: 61  IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDS 112
           IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDS
Sbjct: 61  IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDS 111

[Close]

BLAST of CsaV3_4G037730 vs. NCBI nr
Match: XP_011654293.1 (PREDICTED: chlorophyll a-b binding protein, chloroplastic isoform X3 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 8.2e-51
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 60
           MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL
Sbjct: 1   MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 60

Query: 61  IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDS 112
           IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDS
Sbjct: 61  IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDS 111

[Close]

BLAST of CsaV3_4G037730 vs. NCBI nr
Match: XP_008453033.2 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X2 [Cucumis melo])

HSP 1 Score: 199.5 bits (506), Expect = 1.1e-47
Identity = 105/115 (91.30%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 60
           MAL+QPHTPASSISSSSAS +GTYLQQ RPLTTTLNLRSNHSISHRSTCRASWQELAGVL
Sbjct: 37  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 96

Query: 61  IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDSDSLL 116
           IFSA+PFTAVKAIANSPLG SLQRQLEKKK SAVANSSKFKALAEEARKDS  +L
Sbjct: 97  IFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKFKALAEEARKDSFEIL 151

[Close]

BLAST of CsaV3_4G037730 vs. TAIR10
Match: AT1G76570.1 (Chlorophyll A-B binding family protein)

HSP 1 Score: 95.5 bits (236), Expect = 4.1e-20
Identity = 62/112 (55.36%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 1   MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSIS-HRSTCRASWQELAGV 60
           MAL Q     SS+SSS +S+         P       R+  +++  RS CRASWQELAGV
Sbjct: 1   MALFQ--EKLSSLSSSYSSIHSL------PRILVSKPRNRIAVTKSRSICRASWQELAGV 60

Query: 61  LIFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDS 112
           L+FSAIPFTAVKAIANS +G SL+R+LE+KK  AV NSS+FK+ A+EAR DS
Sbjct: 61  LVFSAIPFTAVKAIANSSIGVSLRRRLEEKKKEAVENSSRFKSKAQEARNDS 104

[Close]

BLAST of CsaV3_4G037730 vs. Swiss-Prot
Match: sp|Q9C9K1|CB7_ARATH (Chlorophyll a-b binding protein 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB7 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.4e-19
Identity = 62/112 (55.36%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 1   MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSIS-HRSTCRASWQELAGV 60
           MAL Q     SS+SSS +S+         P       R+  +++  RS CRASWQELAGV
Sbjct: 1   MALFQ--EKLSSLSSSYSSIHSL------PRILVSKPRNRIAVTKSRSICRASWQELAGV 60

Query: 61  LIFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDS 112
           L+FSAIPFTAVKAIANS +G SL+R+LE+KK  AV NSS+FK+ A+EAR DS
Sbjct: 61  LVFSAIPFTAVKAIANSSIGVSLRRRLEEKKKEAVENSSRFKSKAQEARNDS 104

[Close]

BLAST of CsaV3_4G037730 vs. TrEMBL
Match: tr|A0A0A0L3G2|A0A0A0L3G2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664560 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 1.4e-83
Identity = 180/232 (77.59%), Postives = 180/232 (77.59%), Query Frame = 0


Query: 1   MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 60
           MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL
Sbjct: 1   MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 60

Query: 61  IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKD---------- 120
           IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKD          
Sbjct: 61  IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDRKRLLKKIVE 120

Query: 121 --------------------------SDSLLVSACIKRLDAFHVAALAGRYVFHHSLLNL 180
                                     SDSLLVSACIKRLDAFHVAALAG           
Sbjct: 121 TNESLVKQLIGIILNLLQIQNVTIKLSDSLLVSACIKRLDAFHVAALAG----------- 180

Query: 181 HLILPRPPRSHSDLFSAHICIILFTHLSHSPANMLNLWLTAATIELVMPPER 197
                RPPRSHSDLFSAHICIILFTHLSHSPANMLNLWLTAATIELVMPPER
Sbjct: 181 -----RPPRSHSDLFSAHICIILFTHLSHSPANMLNLWLTAATIELVMPPER 216

[Close]

BLAST of CsaV3_4G037730 vs. TrEMBL
Match: tr|A0A1S3BUP0|A0A1S3BUP0_CUCME (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493859 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.4e-48
Identity = 105/115 (91.30%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 60
           MAL+QPHTPASSISSSSAS +GTYLQQ RPLTTTLNLRSNHSISHRSTCRASWQELAGVL
Sbjct: 37  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 96

Query: 61  IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDSDSLL 116
           IFSA+PFTAVKAIANSPLG SLQRQLEKKK SAVANSSKFKALAEEARKDS  +L
Sbjct: 97  IFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKFKALAEEARKDSFEIL 151

[Close]

BLAST of CsaV3_4G037730 vs. TrEMBL
Match: tr|A0A1S3BVA0|A0A1S3BVA0_CUCME (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493859 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.3e-47
Identity = 104/111 (93.69%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 1   MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 60
           MAL+QPHTPASSISSSSAS +GTYLQQ RPLTTTLNLRSNHSISHRSTCRASWQELAGVL
Sbjct: 37  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 96

Query: 61  IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDS 112
           IFSA+PFTAVKAIANSPLG SLQRQLEKKK SAVANSSKFKALAEEARKDS
Sbjct: 97  IFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKFKALAEEARKDS 147

[Close]

BLAST of CsaV3_4G037730 vs. TrEMBL
Match: tr|A0A1S3BWE1|A0A1S3BWE1_CUCME (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493859 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.3e-47
Identity = 104/111 (93.69%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 1   MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 60
           MAL+QPHTPASSISSSSAS +GTYLQQ RPLTTTLNLRSNHSISHRSTCRASWQELAGVL
Sbjct: 37  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 96

Query: 61  IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDS 112
           IFSA+PFTAVKAIANSPLG SLQRQLEKKK SAVANSSKFKALAEEARKDS
Sbjct: 97  IFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKFKALAEEARKDS 147

[Close]

BLAST of CsaV3_4G037730 vs. TrEMBL
Match: tr|D7UDH1|D7UDH1_VITVI (Chlorophyll a-b binding protein, chloroplastic OS=Vitis vinifera OX=29760 GN=VIT_18s0122g00430 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.0e-21
Identity = 67/111 (60.36%), Postives = 81/111 (72.97%), Query Frame = 0


Query: 1   MALVQPHTPASSISSSSASLFGTYLQQFRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 60
           MAL QP     S+SSSS+S FG Y  +     +    R+ +S S  S C+ASWQELAGVL
Sbjct: 1   MALRQP----CSVSSSSSSFFGGYRHRLCSKISWPKSRNVNSTSTYSGCKASWQELAGVL 60

Query: 61  IFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDS 112
           IFSAIPFTAVKAIANSPLG SLQ ++E+ K +AV NSSKFKALAE+A+ +S
Sbjct: 61  IFSAIPFTAVKAIANSPLGESLQSRMEENKKAAVKNSSKFKALAEKAKNES 107

The following BLAST results are available for this feature:

BLAST of CsaV3_4G037730 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN55549.1	2.1e-83	77.59	hypothetical protein Csa_4G664560 [Cucumis sativus]	[more]
XP_011654292.1	4.8e-51	97.39	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like isoform X2 [Cucu...	[more]
XP_004145567.1	8.2e-51	100.00	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like isoform X1 [Cucu...	[more]
XP_011654293.1	8.2e-51	100.00	PREDICTED: chlorophyll a-b binding protein, chloroplastic isoform X3 [Cucumis sa...	[more]
XP_008453033.2	1.1e-47	91.30	PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X2 [Cucumis m...	[more]

BLAST of CsaV3_4G037730 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76570.1	4.1e-20	55.36	Chlorophyll A-B binding family protein	[more]

BLAST of CsaV3_4G037730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C9K1\|CB7_ARATH	7.4e-19	55.36	Chlorophyll a-b binding protein 7, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of CsaV3_4G037730 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L3G2\|A0A0A0L3G2_CUCSA	1.4e-83	77.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664560 PE=4 SV=1	[more]
tr\|A0A1S3BUP0\|A0A1S3BUP0_CUCME	7.4e-48	91.30	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A1S3BVA0\|A0A1S3BVA0_CUCME	1.3e-47	93.69	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A1S3BWE1\|A0A1S3BWE1_CUCME	1.3e-47	93.69	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|D7UDH1\|D7UDH1_VITVI	2.0e-21	60.36	Chlorophyll a-b binding protein, chloroplastic OS=Vitis vinifera OX=29760 GN=VIT...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0015996	chlorophyll catabolic process
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0044710	single-organism metabolic process
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0031409	pigment binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G037730.1	CsaV3_4G037730.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G037730	CSPI04G27340	Wild cucumber (PI 183967)	cpicucB212
CsaV3_4G037730	Cucsa.272500	Cucumber (Gy14) v1	cgycucB415
CsaV3_4G037730	CsGy4G025650	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G037730	Carg08595	Silver-seed gourd	carcucB0122
CsaV3_4G037730	MELO3C017067	Melon (DHL92) v3.5.1	cucmeB316
CsaV3_4G037730	Lsi04G024330	Bottle gourd (USVL1VR-Ls)	cuclsiB307
CsaV3_4G037730	MELO3C017067.2	Melon (DHL92) v3.6.1	cucmedB308
CsaV3_4G037730	Cla97C11G225260	Watermelon (97103) v2	cucwmbB282
CsaV3_4G037730	Bhi09G002316	Wax gourd	cucwgoB423

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G037730	Cucurbita maxima (Rimu)	cmacucB0031
CsaV3_4G037730	Cucurbita maxima (Rimu)	cmacucB0554
CsaV3_4G037730	Cucurbita moschata (Rifu)	cmocucB0020
CsaV3_4G037730	Cucurbita moschata (Rifu)	cmocucB0540
CsaV3_4G037730	Cucurbita moschata (Rifu)	cmocucB0558
CsaV3_4G037730	Cucurbita pepo (Zucchini)	cpecucB0015
CsaV3_4G037730	Cucurbita pepo (Zucchini)	cpecucB0708
CsaV3_4G037730	Cucurbita pepo (Zucchini)	cpecucB0709
CsaV3_4G037730	Cucurbita pepo (Zucchini)	cpecucB0978
CsaV3_4G037730	Watermelon (Charleston Gray)	cucwcgB289
CsaV3_4G037730	Watermelon (97103) v1	cucwmB370
CsaV3_4G037730	Watermelon (97103) v2	cucwmbB283
CsaV3_4G037730	Wax gourd	cucwgoB426
CsaV3_4G037730	Cucumber (Chinese Long) v3	cuccucB187
CsaV3_4G037730	Silver-seed gourd	carcucB0392
CsaV3_4G037730	Silver-seed gourd	carcucB1094