CsaV3_4G008320 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G008320
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	UBP1-associated protein 2C
Location	chr4 : 5829769 .. 5835157 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCCCGCCATTCGTTCTATTTCTCTTCGTCTCCGTCATCGTTCCAAGCCTCGGATTAGGGTTTAGCTTCACCCTCTTCTTCTTCCTCTACTTCTACTCTACACTTCCAGGGATCTCCCTTCTTCCTCTCCTATAACCCATGGACGTCACCAAGAAGCGGAGGATGGACGAAAACGGTGTCGACTCCTCCGAAAGTTCTTTTTCAAGAATTACTCCCGAAGACGCCCGCAAGATCATTGATCGTTTCACTCCCGACCAGCTTATCGATATTCTACAAGATGCGGTTTCGCGCCACTTAGATGTTCTTGATGCAGTACGATCAATTGCCGACCGAGATGTCTCCCAGCGGAAGCTATTTATTCGGGGTCTTAGTTGCGATACCAGTACAGAAGGCTTGCGTTCTCTCTTTTCCTCTTATGGGGAGCTTGAAGAAGCTGTTGTTATTATTGACAAGGCAACCGGGAAATCGAAAGGTTATGGCTTTGTGACTTTTAAGCATGTTGATGGTGCTCTACTGGCTTTGAAGGAACCGAGCAAGACAATTGATGGCCGCGTTACGGTGACGCAATTGGCTGCGGTGGGAATTTCCGGCCAGAATTCAAACGCTGCGGACTTGTCCTTGAGGAAAATTTATGTGGCCAATGTTCCGATGGATATGCCGGCCGATAAGCTGTTGGCACACTTTTCGCTGTATGGAGAAATTGAGGAGGGGCCGCTAGGGTTCGATAAGCAGACGGGTAAATGTAGGGGTTATGCTTTATTCGTTTACAAAAAGCCAGAGGGTGCTCAGGCAGCTCTGGTGGATCCTATCAAGACGATTGATGGAAGGCAGTTGAGTTGTAAATTTGCCAACGATGGGAAGAAAGGGAAACCTGGCGGAGGGCCAGATGGAAACCAAACGCAGGGGGCAGGTCAAGGAAACGTGCATGGTGATGGCATGCCAATGGCTCCTCCGTCGGCAATGCCTGGTTCAGGCGGACAATACGGTGGACCGGGAGGCATGGGGTCATATGGAGGGTTTTCTAGTGGGCTTCAAGGGGCTCAGCCGCTGGCTCATCATCCGCTCAACTCGTCAATGGGTCCGGGGCTATCTTCTGTCGGGGGTCAGGCTCCATCTTCGTTGGGAAGCTCCGGTGGATACGGTGGCGGACCATATGGTGGTGGGTACGGTGGGCCTGGGTCAATTTATGGCGGTATGGGAAGTGTAGGTGGGGGTTTGGGTGGTTCTGGAGGCGGGTTGGGCGGAGCTGGGGGTGCTTCATCGCTGTATAGATTACCACAGAGTTCGGTTGGAATGCCTTCTGGCGGTTATCCGGATAGTGGGCATTATAGCATGTCATCAGCATCCGGGCACCCAAATCAGCACCATCAACCGGCAGGAACATCACCAGCGCCACGTGTTCCACCTGGAGGGATGTATCCCAATGTGCCACCATATTACTGAGGTATTTTCGTTTTCATTCACACTGTCAATTATTTCATGATGTGTGATTTTAGATTAGCCACGCATACCTTATTCTTGTTATTCTGCATGTTTGTTCCGAAAACTAATCTGCAGCGATCTTTTCCCCTCTGCTTGATGGTGTCAAGTTCCTTGGGGTTGTTCAGTTACTAACTTTTGTTTTGTGGCCTTTAGCATTCGAGCTTAACGTAAATGCATGTTTTGCCTGAAAATCTGCTTTTTCTCGTCATTTCTTTTTTGTTGTATTTTTTTCCGGGTCTAGTTTTTGCTTTCGTATCATATGGCTCCGGATTTTTTTGGTGACTATTGCGTTCTAAATAGTAGCAGTTTTCTTAATAAATCCTTTGCATTATATTACCACTAATGCGGATTCTTTTGGTTTATTTTTCAATTTGACATCAGTTCTCACTTTTAATTTTGTTTCGTTGGTTTTCCATTGCACCGTTTTTAGGCTTTTCGCCATATTCTCAATATTTGTGGCTTTCGATGATAATTATACTTGTGCGGTTATTATTTGCTTGAATTCCATTTACTGCAAAGGATTTCACTTGTTCATGTATTATGTTGTTAGAACGTGTAACATTCGTGTGATTGAGATGCAAACCTAGGTAATTTGAATTTTAGCTGAAATAATTCTGATGCTTTGGTTGCTTCATTGTGATTGATGACATTATCTTTGAGTCAATCCGTACTAGAACCACGTAGGATGTTATATTTGAGAAGGGTTGGTTTTATTTTTATGCATGTGCATCCACTCTCTAAAAGTAATGAAATCTTATTTCTTCTATTTTGCCTATTCTTTCCCATTCCCTTGTTTTTTTTTCATGTTATACAATCGTTTGTTTCTGGAATAAGACATCATTCTTATCTCCTTCTCTCTCCTTTCGTGTATATTGTTGACTTGTTAGAATGACGATACTTGGCTTCTCCTCTTGTTAGAAAGCACTTTGGCTATTTCTACTGACCATGCCTTTATTAGCTCGTGTCAGCTTACTTTGGAAAGCTGGATTTTTGAAAATGCTGATTTCATATTCTCTCGGGAATTAGTTATTGAATATATGTACTCACAGCTAAAGTTGATTATTTCTGGAGTCTCTGTGATCTAATTGGCTTAGATATGCTGACTTTTATAGTTTCCGTAGCATTTTTCTTAATTAACATTAATAGAAAGAATTGTTGGTTTTTATATGCACTTATCTTATTTATTCAAAATAGTGGTCCCAACTTAATGGCAATATGTGTTAATTATCACATATGTTTTAAGCCATGTACCATGTGGATATGGAAACTGAAAGAAGGAAGGTATTATTTGTTCATTTATTATCTCATGTAAATGAGGTCTTCACTTTCTGACTTATCCTGTCCCTGCCCTCATCTTTACTTTTTTTATTTATCCTACCGTTTGGATTTTGGGAATGAAGCCATTCTCATTTTTTCTCCTCTATTATATATATAAACACACAATGTCTGTTTCTTGTTCTGAAGGCTGCCATTTGTACTACAGTTTATTATCTCGTTAGCTCATAATACGTGGCTTAGAAACATTGATTTATCTGAGTATGTTGGTTTCAATATAAAGGAGCTACTTGTTGAATCTAATTAATTTAATGTTTAAGTTGTCGTTTCTCTTATTACTGTAATCCAAATCTCATTTTGTTTATAACTAAAGGGAGTTTTGGTGGTCTGTTTTTTTGTATGCCCTTGTACTCTTTCATTTTTTTCTCAATGAAAGTTGTTTCTATAAAAAACTGAAGGGAGATTGATTGTATTGTCTAGTTTATTTGAAATGCTGGTCTTCACCTTTATGATTCTGACCATCTAAGATTTCCTTTGGATTTCTAACACCGTTGCTTTTACATTGTCAATGCTATAGCCTTTATAATTTTGGTTTCTTGTTCCAGAAAAATGCCTTCATAATGTCTGAGTTTTGGTTAAATCTGCTGTGTTTCCCTTTGAACTATTTATTTTATGTTAGCTCTCTCTATTTAAGTATGTGGTTTTATTATTCATAGTTTTTTTAGCAAGGGTTGATGATTGGTTTAAGATATTGTTTGAATAATTTGCTTTCACCTAGCATGACCTTTTCTTGTTTGTTTGTGTGTAGTGATGAGTTTAGTTAAATGGGTTTCTGATTCAGGTTATGATGCTTGTTGGGCGCAGATGCTTTATGTGCTCTGGTGATTGCGTTGATTGCAGACTGTAACTCTGGTTTGATGAATGCATTAGCTTTGCTTGTGGCCTCTGCTGTTTAACTGCACCTTTGAGTTGTCCCTTGATAATTACTTGTAGTCAAAGAGACAGTTAGAAAGTTAGATAATTTTTGTACTGTACCCAATCACTTATTTGTGCTACTTGACTTTTCTACTAGTAGTGAGTTTTAGTATTTTATGAGTACTTTTATTTGCTCTGGTTATTGTAGCTTTGTCTGTTTTCTTTTGCTTTCAAATGCTTGGACAATCTTTTCTTCTATCTTTTTCATCTACTGTTCTCCTTTTCCCCCTAAGCATTTATTGCTTAGAATTTCGTATTTTGATATTTTCAACTTTGATAGTCACTTGTGCTCGTCTTGATTTGAGTGTATCAACCGCCATCTTGGTTTGAGTGTATCAACCTGTTTGAAGAATATTGTATTTTCTTGGTTGTTGACTCGTTGCGCTCATCTGCTGGGAACTTTGAATCGTTGGCAGTTCTTGTTGTCTAATTGGTTTTTATTCCCTTCTCTTCCATTATTATTGTCATACTTTTCAATCATTGTTTGTGGATGATTGATGAAAGAATTAAGAAGGGAAAATAAAATCCATGGTGGTTGTATTTGTTGAACTTGGTAGTGGTTTGTATGTCGATGCTGTGTGGGTCCAACTTCTATTGTTGCTCTGCTGTGTGTCTTTGTTTTGAAGAAAGTTGTTGGAGCAACAGACTTTTGTCAGGCTTGGATTTGAATGTTACTTGAAGCCCTTTATATGTATCTATTATCTTTTGATGGTTTGGTTTTGTTGACCTATAGACTGAGAGAGATGCTATTTTCACTTCTGAGTTGTGTGACTTCACTCTTTAGTTGGTTGATTCAAGTGCATAGTTGAGTTAGATGGTTGGACCAAATACATGAGCACAGTGACGAGACTGAGTTCATTTTTGCTTTCTTTATTTCTGTGTCGTGTATTGATTACTTCGAAGTTGGCTTGGTTGATGGTGGGTGGTGTGTTTTTTTTTATGGATGACGAAAGAATATTTGTTTCTCATTGCCCCTTTTTACTCGATATATTGTTCTTCAACCCCATTTAGAAGTTTGACCTATTCACTTTCAAATTTTGTGAAAAAAATTACTCAGTATTTTGATGGAGTTTTAGGTGCCAAATATTTTGGAGGCCTAGAATTTGTAGGATGGATGTTAGAAACTGAACTGGCATTGCCTTAATTGGTTTGTGAGTCGGTTTGGAATGAGGTTGTAGGTGTGAAGAAGTTGATTTGTATGAAATATTTAAAAATAAATCCCAAATGCCCCTGATGAAGAGTGTTTATTAGATTTATGTTTCTCTCACATAATATTTGGCGTTTTTTGTGTTTTGTGTTTGGTGGAATATGAAATGAGATGACACAAGTGGACATCAACCCACTGGGGGGGGGGCACCTGTTTGTGGAGGACTTAATATCACTCAACAAGACTTCACATTAAATTGCTGCTGAAATTTTACAATTCCTTTCTCTTTGGCATCACCTGTTGATGAAGCTCATTCCTCGGTTCACCCATGGCTTCTCTCTGTAATCTTATCTCCTTTTTTTCTTTTTCCCTTGAAATTATGGAATCATATAATTAAATTTGTTTTGTTTCTTAGAAACATTTTCTTCTTTTTTTGGAAAGATATAAAATTATTGTCACTGCCTGTTGAATGTTAATATTTACATAAACTTATGGAACAAAGGTTCTTCA

mRNA sequence

ATGGACGTCACCAAGAAGCGGAGGATGGACGAAAACGGTGTCGACTCCTCCGAAAGTTCTTTTTCAAGAATTACTCCCGAAGACGCCCGCAAGATCATTGATCGTTTCACTCCCGACCAGCTTATCGATATTCTACAAGATGCGGTTTCGCGCCACTTAGATGTTCTTGATGCAGTACGATCAATTGCCGACCGAGATGTCTCCCAGCGGAAGCTATTTATTCGGGGTCTTAGTTGCGATACCAGTACAGAAGGCTTGCGTTCTCTCTTTTCCTCTTATGGGGAGCTTGAAGAAGCTGTTGTTATTATTGACAAGGCAACCGGGAAATCGAAAGGTTATGGCTTTGTGACTTTTAAGCATGTTGATGGTGCTCTACTGGCTTTGAAGGAACCGAGCAAGACAATTGATGGCCGCGTTACGGTGACGCAATTGGCTGCGGTGGGAATTTCCGGCCAGAATTCAAACGCTGCGGACTTGTCCTTGAGGAAAATTTATGTGGCCAATGTTCCGATGGATATGCCGGCCGATAAGCTGTTGGCACACTTTTCGCTGTATGGAGAAATTGAGGAGGGGCCGCTAGGGTTCGATAAGCAGACGGGTAAATGTAGGGGTTATGCTTTATTCGTTTACAAAAAGCCAGAGGGTGCTCAGGCAGCTCTGGTGGATCCTATCAAGACGATTGATGGAAGGCAGTTGAGTTGTAAATTTGCCAACGATGGGAAGAAAGGGAAACCTGGCGGAGGGCCAGATGGAAACCAAACGCAGGGGGCAGGTCAAGGAAACGTGCATGGTGATGGCATGCCAATGGCTCCTCCGTCGGCAATGCCTGGTTCAGGCGGACAATACGGTGGACCGGGAGGCATGGGGTCATATGGAGGGTTTTCTAGTGGGCTTCAAGGGGCTCAGCCGCTGGCTCATCATCCGCTCAACTCGTCAATGGGTCCGGGGCTATCTTCTGTCGGGGGTCAGGCTCCATCTTCGTTGGGAAGCTCCGGTGGATACGGTGGCGGACCATATGGTGGTGGGTACGGTGGGCCTGGGTCAATTTATGGCGGTATGGGAAGTGTAGGTGGGGGTTTGGGTGGTTCTGGAGGCGGGTTGGGCGGAGCTGGGGGTGCTTCATCGCTGTATAGATTACCACAGAGTTCGGTTGGAATGCCTTCTGGCGGTTATCCGGATAGTGGGCATTATAGCATGTCATCAGCATCCGGGCACCCAAATCAGCACCATCAACCGGCAGGAACATCACCAGCGCCACGTGTTCCACCTGGAGGGATGTATCCCAATGTGCCACCATATTACTGA

Coding sequence (CDS)

ATGGACGTCACCAAGAAGCGGAGGATGGACGAAAACGGTGTCGACTCCTCCGAAAGTTCTTTTTCAAGAATTACTCCCGAAGACGCCCGCAAGATCATTGATCGTTTCACTCCCGACCAGCTTATCGATATTCTACAAGATGCGGTTTCGCGCCACTTAGATGTTCTTGATGCAGTACGATCAATTGCCGACCGAGATGTCTCCCAGCGGAAGCTATTTATTCGGGGTCTTAGTTGCGATACCAGTACAGAAGGCTTGCGTTCTCTCTTTTCCTCTTATGGGGAGCTTGAAGAAGCTGTTGTTATTATTGACAAGGCAACCGGGAAATCGAAAGGTTATGGCTTTGTGACTTTTAAGCATGTTGATGGTGCTCTACTGGCTTTGAAGGAACCGAGCAAGACAATTGATGGCCGCGTTACGGTGACGCAATTGGCTGCGGTGGGAATTTCCGGCCAGAATTCAAACGCTGCGGACTTGTCCTTGAGGAAAATTTATGTGGCCAATGTTCCGATGGATATGCCGGCCGATAAGCTGTTGGCACACTTTTCGCTGTATGGAGAAATTGAGGAGGGGCCGCTAGGGTTCGATAAGCAGACGGGTAAATGTAGGGGTTATGCTTTATTCGTTTACAAAAAGCCAGAGGGTGCTCAGGCAGCTCTGGTGGATCCTATCAAGACGATTGATGGAAGGCAGTTGAGTTGTAAATTTGCCAACGATGGGAAGAAAGGGAAACCTGGCGGAGGGCCAGATGGAAACCAAACGCAGGGGGCAGGTCAAGGAAACGTGCATGGTGATGGCATGCCAATGGCTCCTCCGTCGGCAATGCCTGGTTCAGGCGGACAATACGGTGGACCGGGAGGCATGGGGTCATATGGAGGGTTTTCTAGTGGGCTTCAAGGGGCTCAGCCGCTGGCTCATCATCCGCTCAACTCGTCAATGGGTCCGGGGCTATCTTCTGTCGGGGGTCAGGCTCCATCTTCGTTGGGAAGCTCCGGTGGATACGGTGGCGGACCATATGGTGGTGGGTACGGTGGGCCTGGGTCAATTTATGGCGGTATGGGAAGTGTAGGTGGGGGTTTGGGTGGTTCTGGAGGCGGGTTGGGCGGAGCTGGGGGTGCTTCATCGCTGTATAGATTACCACAGAGTTCGGTTGGAATGCCTTCTGGCGGTTATCCGGATAGTGGGCATTATAGCATGTCATCAGCATCCGGGCACCCAAATCAGCACCATCAACCGGCAGGAACATCACCAGCGCCACGTGTTCCACCTGGAGGGATGTATCCCAATGTGCCACCATATTACTGA

Protein sequence

MDVTKKRRMDENGVDSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVRSIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKHVDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLAHFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDGKKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGGQYGGPGGMGSYGGFSSGLQGAQPLAHHPLNSSMGPGLSSVGGQAPSSLGSSGGYGGGPYGGGYGGPGSIYGGMGSVGGGLGGSGGGLGGAGGASSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQPAGTSPAPRVPPGGMYPNVPPYY

Homology

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BLAST of CsaV3_4G008320 vs. NCBI nr
Match: XP_004137219.1 (PREDICTED: UBP1-associated protein 2C [Cucumis sativus] >XP_011653305.1 PREDICTED: UBP1-associated protein 2C [Cucumis sativus] >KGN53592.1 hypothetical protein Csa_4G083660 [Cucumis sativus])

HSP 1 Score: 699.9 bits (1805), Expect = 5.5e-198
Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 0


Query: 1   MDVTKKRRMDENGVDSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVR 60
           MDVTKKRRMDENGVDSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVR
Sbjct: 1   MDVTKKRRMDENGVDSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVR 60

Query: 61  SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKH 120
           SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKH
Sbjct: 61  SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKH 120

Query: 121 VDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLA 180
           VDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLA
Sbjct: 121 VDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLA 180

Query: 181 HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG 240
           HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG
Sbjct: 181 HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG 240

Query: 241 KKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGGQXXXXXXXXXXXXXSSGLQG 300
           KKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGGQXXXXXXXXXXXXXSSGLQG
Sbjct: 241 KKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGGQXXXXXXXXXXXXXSSGLQG 300

Query: 301 AQPLAHHPLNSSMGPGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           AQPLAHHPLNSSMGPGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 AQPLAHHPLNSSMGPGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQPAGTSPAPR 420
           XXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQPAGTSPAPR
Sbjct: 361 XXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQPAGTSPAPR 420

Query: 421 VPPGGMYPNVPPYY 435
           VPPGGMYPNVPPYY
Sbjct: 421 VPPGGMYPNVPPYY 434

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BLAST of CsaV3_4G008320 vs. NCBI nr
Match: XP_008451717.1 (PREDICTED: UBP1-associated protein 2C [Cucumis melo] >XP_008451718.1 PREDICTED: UBP1-associated protein 2C [Cucumis melo] >XP_008451719.1 PREDICTED: UBP1-associated protein 2C [Cucumis melo])

HSP 1 Score: 694.9 bits (1792), Expect = 1.8e-196
Identity = 418/434 (96.31%), Postives = 420/434 (96.77%), Query Frame = 0


Query: 1   MDVTKKRRMDENGVDSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVR 60
           MDVTKKRRMDENGVDSSE+SFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVL+AVR
Sbjct: 1   MDVTKKRRMDENGVDSSENSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLEAVR 60

Query: 61  SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKH 120
           SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKH
Sbjct: 61  SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKH 120

Query: 121 VDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLA 180
           VDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLA
Sbjct: 121 VDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLA 180

Query: 181 HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG 240
           HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG
Sbjct: 181 HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG 240

Query: 241 KKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGGQXXXXXXXXXXXXXSSGLQG 300
           KKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSG Q             SSGLQG
Sbjct: 241 KKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGAQYGGPGGMGSYAGFSSGLQG 300

Query: 301 AQPLAHHPLNSSMGPGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           AQPLAHHPLNSSMGPGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 AQPLAHHPLNSSMGPGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQPAGTSPAPR 420
           XXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQPAGTSPAPR
Sbjct: 361 XXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQPAGTSPAPR 420

Query: 421 VPPGGMYPNVPPYY 435
           VPPGGMYPNVPPYY
Sbjct: 421 VPPGGMYPNVPPYY 434

[Close]

BLAST of CsaV3_4G008320 vs. NCBI nr
Match: XP_022980930.1 (UBP1-associated protein 2C-like [Cucurbita maxima] >XP_022980938.1 UBP1-associated protein 2C-like [Cucurbita maxima])

HSP 1 Score: 647.5 bits (1669), Expect = 3.2e-182
Identity = 409/435 (94.02%), Postives = 419/435 (96.32%), Query Frame = 0


Query: 1   MDVTKKRRMDENGVDSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVR 60
           MD TKKRRM+ENGVDSSE+SF +IT +DARKIIDRFTPDQLIDILQDAVSRH DVLDAVR
Sbjct: 1   MDATKKRRMEENGVDSSENSFLKITSDDARKIIDRFTPDQLIDILQDAVSRHTDVLDAVR 60

Query: 61  SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKH 120
           SIADRDVSQRKLFIRGLSCDTSTEGLRSLFS+YGELEEAVVIIDKATGKSKGYGFVTFKH
Sbjct: 61  SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSAYGELEEAVVIIDKATGKSKGYGFVTFKH 120

Query: 121 VDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLA 180
           VDGA+LALKEPSKTIDGRVTVTQLAAVGISGQNSNAAD+SLRKIYVANVPMDMPADKLLA
Sbjct: 121 VDGAILALKEPSKTIDGRVTVTQLAAVGISGQNSNAADMSLRKIYVANVPMDMPADKLLA 180

Query: 181 HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG 240
           HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG
Sbjct: 181 HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG 240

Query: 241 KKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGGQXXXXXXXXXXXXXSSGLQG 300
           KKGKPGGG DG QT GAGQGN+HGDGMPMAPPSAMPGSGGQ XXXXXXXXXXXXSSG+QG
Sbjct: 241 KKGKPGGGQDGIQTPGAGQGNLHGDGMPMAPPSAMPGSGGQYXXXXXXXXXXXXSSGVQG 300

Query: 301 AQPLAHHPLNSSMGPGLS-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
            QPL HHPLNSSMGPGLS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 GQPLGHHPLNSSMGPGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQPAGTSPAP 420
           XXXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPN  HQ A TSPAP
Sbjct: 361 XXXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNPLHQQAVTSPAP 420

Query: 421 RVPPGGMYPNVPPYY 435
           RVPPGGMYP+VPPYY
Sbjct: 421 RVPPGGMYPSVPPYY 435

[Close]

BLAST of CsaV3_4G008320 vs. NCBI nr
Match: XP_023538334.1 (UBP1-associated protein 2C-like [Cucurbita pepo subsp. pepo] >XP_023538342.1 UBP1-associated protein 2C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 642.5 bits (1656), Expect = 1.0e-180
Identity = 405/435 (93.10%), Postives = 415/435 (95.40%), Query Frame = 0


Query: 1   MDVTKKRRMDENGVDSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVR 60
           MD TKKRRM+ENGVDSSE+SF +IT +DARKIIDRFTPDQLIDILQDAVSRH DVLDAVR
Sbjct: 1   MDATKKRRMEENGVDSSENSFLKITSDDARKIIDRFTPDQLIDILQDAVSRHTDVLDAVR 60

Query: 61  SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKH 120
           SIADRDVSQRKLFIRGLSCDTSTEGLRSLFS+YGELEEAVVIIDKATGKSKGYGFVTFKH
Sbjct: 61  SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSAYGELEEAVVIIDKATGKSKGYGFVTFKH 120

Query: 121 VDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLA 180
           VDGA+LALKEPSKTIDGRVTVTQLAAVGISGQNSNAAD+SLRKIYVANVPMDMPADKLLA
Sbjct: 121 VDGAILALKEPSKTIDGRVTVTQLAAVGISGQNSNAADMSLRKIYVANVPMDMPADKLLA 180

Query: 181 HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG 240
           HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG
Sbjct: 181 HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG 240

Query: 241 KKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGGQXXXXXXXXXXXXXSSGLQG 300
           KKGKPGGG DG QT GAGQGN+HGDGMPMAPPSAMPGSGGQ XXXXXXXXXXXXSSG+QG
Sbjct: 241 KKGKPGGGQDGIQTPGAGQGNLHGDGMPMAPPSAMPGSGGQYXXXXXXXXXXXXSSGVQG 300

Query: 301 AQPLAHHPLNSSMGPGLSS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
            QPL HHPLNSSMGPGLSS   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 GQPLGHHPLNSSMGPGLSSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQPAGTSPAP 420
           XXXXXXXXXXXXXX  LYRLPQSSVGMPSGGY DSGHYSMSSASGHPN  HQ A TSPAP
Sbjct: 361 XXXXXXXXXXXXXXXXLYRLPQSSVGMPSGGYQDSGHYSMSSASGHPNPLHQQAVTSPAP 420

Query: 421 RVPPGGMYPNVPPYY 435
           RVPPGGMYP+VPPYY
Sbjct: 421 RVPPGGMYPSVPPYY 435

[Close]

BLAST of CsaV3_4G008320 vs. NCBI nr
Match: XP_023553445.1 (UBP1-associated protein 2C-like [Cucurbita pepo subsp. pepo] >XP_023553446.1 UBP1-associated protein 2C-like [Cucurbita pepo subsp. pepo] >XP_023553447.1 UBP1-associated protein 2C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 631.3 bits (1627), Expect = 2.4e-177
Identity = 397/435 (91.26%), Postives = 410/435 (94.25%), Query Frame = 0


Query: 1   MDVTKKRRMDENGVDSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVR 60
           MDVTKKRRMDENGVDSS+ SFSRITPEDARKIIDRFTPDQLIDILQDAVSRH+DVLDAVR
Sbjct: 1   MDVTKKRRMDENGVDSSDHSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHVDVLDAVR 60

Query: 61  SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKH 120
            IADRDVSQRKLFIRGLSCDTSTEGLRSLFS+YGELEEAVVIIDK TGKSKGYGFVTFKH
Sbjct: 61  CIADRDVSQRKLFIRGLSCDTSTEGLRSLFSAYGELEEAVVIIDKVTGKSKGYGFVTFKH 120

Query: 121 VDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLA 180
           VDG++LALKEPSKTIDGRVTVTQLAAVG+SGQ+SNAADLSLRKIYVANVPMDMPADKLLA
Sbjct: 121 VDGSILALKEPSKTIDGRVTVTQLAAVGVSGQSSNAADLSLRKIYVANVPMDMPADKLLA 180

Query: 181 HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG 240
           HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKK EGAQAALVDPIKTIDGRQLSCK+ANDG
Sbjct: 181 HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPIKTIDGRQLSCKYANDG 240

Query: 241 KKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGGQXXXXXXXXXXXXXSSGLQG 300
           KKGKPGGG DG QT GAGQGN+HGDGMPMAPPSA+PGSG  XXXXXXXXXXXXX      
Sbjct: 241 KKGKPGGGTDGIQTTGAGQGNLHGDGMPMAPPSAIPGSGXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 AQPLAHHPLNSSMGPGLSS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
            QPL HHPLNSSMGPG+SS   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XQPLGHHPLNSSMGPGISSVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQPAGTSPAP 420
           XXXXXXXXXXXXX SSLYRL QSSVGMPSGGYPDSGHYSMSSASGHPN HHQ AG SPAP
Sbjct: 361 XXXXXXXXXXXXXVSSLYRLSQSSVGMPSGGYPDSGHYSMSSASGHPNHHHQQAGASPAP 420

Query: 421 RVPPGGMYPNVPPYY 435
           RVPPGG+YPN+PPYY
Sbjct: 421 RVPPGGLYPNMPPYY 435

[Close]

BLAST of CsaV3_4G008320 vs. TAIR10
Match: AT3G15010.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 380.9 bits (977), Expect = 1.0e-105
Identity = 288/440 (65.45%), Postives = 326/440 (74.09%), Query Frame = 0


Query: 1   MDVTKKRRMDENGVDSSESSF-----SRITPEDARKIIDRFTPDQLIDILQDAVSRHLDV 60
           MD+ KKR++DENG   + +       +R++P+DARKII+RFT DQL+D+LQ+A+ RH DV
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 61  LDAVRSIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGF 120
           L++VR  AD D+SQRKLFIRGL+ DT+TEGLRSLFSSYG+LEEA+VI+DK TGKSKGYGF
Sbjct: 61  LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF 120

Query: 121 VTFKHVDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPA 180
           VTF HVDGALLALKEPSK IDGRVTVTQLAA G  G  S  AD+S+RKIYVANVP DMPA
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA 180

Query: 181 DKLLAHFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCK 240
           D+LL HF  YG++EEGPLGFDK TGK RG+ALFVYK  EGAQAAL DP+K IDG+ L+CK
Sbjct: 181 DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK 240

Query: 241 FANDGKKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGGQXXXXXXXXXXXXXS 300
            A DGKK   GG P                GMP A        G  XXXXXXXXXXX   
Sbjct: 241 LAVDGKK---GGKP----------------GMPQA-----QDGGXXXXXXXXXXXXXVRP 300

Query: 301 SGLQGAQPLAHHPLNSSMGPGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           +G          P           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 AG----------PYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXSSLYRLPQSSVGMP-SGGYPDSGHYSMSSASGHPNQHHQPAG 420
           XXXXXXXXXXXXXXXX  S  YR+P SS  MP  GGYP+SGHY +SS++G+P QHHQ  G
Sbjct: 361 XXXXXXXXXXXXXXXXTGSGQYRMPPSS--MPGGGGYPESGHYGLSSSAGYPGQHHQAVG 404

Query: 421 TSPAPRVPPGGMYPNVPPYY 435
           TSP PRVP GGMYPN PP Y
Sbjct: 421 TSPVPRVPHGGMYPNGPPNY 404

[Close]

BLAST of CsaV3_4G008320 vs. TAIR10
Match: AT2G41060.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 198.7 bits (504), Expect = 7.2e-51
Identity = 101/219 (46.12%), Postives = 140/219 (63.93%), Query Frame = 0


Query: 32  IIDRFTPDQLIDILQDAVSRHLDVLDAVRSIADRDVSQRKLFIRGLSCDTSTEGLRSLFS 91
           +++ F+ DQL+ +L++A  RH DV + +R +AD D+  RK+F+ GL  DT  + L   F 
Sbjct: 90  LLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFK 149

Query: 92  SYGELEEAVVIIDKATGKSKGYGFVTFKHVDGALLALKEPSKTIDGRVTVTQLAAVG--- 151
            YGE+E+   ++DK +G+SKGYGF+ FK   GA  ALK+P K I  R+T  QLA++G   
Sbjct: 150 QYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTRMTACQLASIGPVQ 209

Query: 152 -----ISGQNSNAADLSLRKIYVANVPMDMPADKLLAHFSLYGEIEEGPLGFDKQTGKCR 211
                   Q+ N  ++  RKIYV+NV  D+   KLL  FS +GEIEEGPLG DK TG+ +
Sbjct: 210 GNPVVAPAQHFNPENVQ-RKIYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPK 269

Query: 212 GYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDGKK 243
           G+ALFVY+  E A+ AL +P KT +G  L C  ANDG K
Sbjct: 270 GFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPK 307

[Close]

BLAST of CsaV3_4G008320 vs. TAIR10
Match: AT3G56860.3 (UBP1-associated protein 2A)

HSP 1 Score: 185.7 bits (470), Expect = 6.3e-47
Identity = 112/277 (40.43%), Postives = 155/277 (55.96%), Query Frame = 0


Query: 32  IIDRFTPDQLIDILQDAVSRHLDVLDAVRSIADRDVSQRKLFIRGLSCDTSTEGLRSLFS 91
           +++ F+ +Q++ +L++A  +H+DV + +R +AD D   RK+F+ GL  DT TE L   F 
Sbjct: 102 LLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFK 161

Query: 92  SYGELEEAVVIIDKATGKSKGYGFVTFKHVDGALLALKEPSKTIDGRVTVTQL------- 151
            YGE+E+   + DK +GKSKGYGF+ +K   GA  ALK+P K I  R+T  QL       
Sbjct: 162 QYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGPVF 221

Query: 152 -------AAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLAHFSLYGEIEEGPLGFDK 211
                  AAV    Q+SN ++ + +KIYV+NV  ++   KLL  FS +GEIEEGPLG DK
Sbjct: 222 GGAPIAAAAVSAPAQHSN-SEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDK 281

Query: 212 QTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDGKKGKPG----------- 271
            TG+ +G+ LFVYK  E A+ AL +P KT +G  L C+ A DG   KPG           
Sbjct: 282 YTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAIDGP--KPGKQQQHHHNPHA 341

Query: 272 -GGPDGNQTQGAGQGNVHGDGMPMA-PPSAMPGSGGQ 282
              P   +    G G   G G  MA  P+ M G   Q
Sbjct: 342 YNNPRYQRNDNNGYGPPGGHGHLMAGNPAGMGGPTAQ 375

[Close]

BLAST of CsaV3_4G008320 vs. TAIR10
Match: AT2G22090.2 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 113.6 bits (283), Expect = 3.0e-25
Identity = 58/123 (47.15%), Postives = 80/123 (65.04%), Query Frame = 0


Query: 26  PEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVRSIADRDVSQRKLFIRGLSCDTSTEG 85
           PE+ R+++  ++ DQL+D++  A      +  AV   ADRDV+ RK+F+ GL  +T+ E 
Sbjct: 60  PEELRELLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRET 119

Query: 86  LRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKHVDGALLALKEPSKTIDGRVTVTQLA 145
           L  +F  YGE+EE  V+IDKATGK+KG+GFV FK   GA  ALKEP K I  R    QLA
Sbjct: 120 LVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLA 179

Query: 146 AVG 149
           ++G
Sbjct: 180 SMG 182

[Close]

BLAST of CsaV3_4G008320 vs. TAIR10
Match: AT2G19380.1 (RNA recognition motif (RRM)-containing protein)

HSP 1 Score: 105.9 bits (263), Expect = 6.3e-23
Identity = 51/134 (38.06%), Postives = 85/134 (63.43%), Query Frame = 0


Query: 27  EDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVRSIADRDVSQRKLFIRGLSCDTSTEGL 86
           ED ++++  ++ ++L++++     +   ++ A+   ADRD++QR +F+RG   DT+ E L
Sbjct: 365 EDIKQLLVAYSKEELVNLIYKTAEKGSRLISAILESADRDIAQRNIFVRGFGWDTTQENL 424

Query: 87  RSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKHVDGALLALKEPSKTIDGRVTVTQLAA 146
           ++ F SYGE+EE  V++DK TG+ KGYGFV FK   GA  ALK P K +  R+ V  LA+
Sbjct: 425 KTAFESYGEIEECSVVMDKDTGRGKGYGFVMFKTRKGAREALKRPEKRMYNRIVVCNLAS 484

Query: 147 --VGISGQNSNAAD 159
              G +G+  + A+
Sbjct: 485 EKPGKAGKEQDMAE 498

[Close]

BLAST of CsaV3_4G008320 vs. Swiss-Prot
Match: sp|Q9LKA4|UBA2C_ARATH (UBP1-associated protein 2C OS=Arabidopsis thaliana OX=3702 GN=UBA2C PE=2 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.8e-104
Identity = 288/440 (65.45%), Postives = 326/440 (74.09%), Query Frame = 0


Query: 1   MDVTKKRRMDENGVDSSESSF-----SRITPEDARKIIDRFTPDQLIDILQDAVSRHLDV 60
           MD+ KKR++DENG   + +       +R++P+DARKII+RFT DQL+D+LQ+A+ RH DV
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 61  LDAVRSIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGF 120
           L++VR  AD D+SQRKLFIRGL+ DT+TEGLRSLFSSYG+LEEA+VI+DK TGKSKGYGF
Sbjct: 61  LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF 120

Query: 121 VTFKHVDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPA 180
           VTF HVDGALLALKEPSK IDGRVTVTQLAA G  G  S  AD+S+RKIYVANVP DMPA
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA 180

Query: 181 DKLLAHFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCK 240
           D+LL HF  YG++EEGPLGFDK TGK RG+ALFVYK  EGAQAAL DP+K IDG+ L+CK
Sbjct: 181 DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK 240

Query: 241 FANDGKKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGGQXXXXXXXXXXXXXS 300
            A DGKK   GG P                GMP A        G  XXXXXXXXXXX   
Sbjct: 241 LAVDGKK---GGKP----------------GMPQA-----QDGGXXXXXXXXXXXXXVRP 300

Query: 301 SGLQGAQPLAHHPLNSSMGPGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           +G          P           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 AG----------PYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXSSLYRLPQSSVGMP-SGGYPDSGHYSMSSASGHPNQHHQPAG 420
           XXXXXXXXXXXXXXXX  S  YR+P SS  MP  GGYP+SGHY +SS++G+P QHHQ  G
Sbjct: 361 XXXXXXXXXXXXXXXXTGSGQYRMPPSS--MPGGGGYPESGHYGLSSSAGYPGQHHQAVG 404

Query: 421 TSPAPRVPPGGMYPNVPPYY 435
           TSP PRVP GGMYPN PP Y
Sbjct: 421 TSPVPRVPHGGMYPNGPPNY 404

[Close]

BLAST of CsaV3_4G008320 vs. Swiss-Prot
Match: sp|O80678|UBA2B_ARATH (UBP1-associated protein 2B OS=Arabidopsis thaliana OX=3702 GN=UBA2B PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.3e-49
Identity = 101/219 (46.12%), Postives = 140/219 (63.93%), Query Frame = 0


Query: 32  IIDRFTPDQLIDILQDAVSRHLDVLDAVRSIADRDVSQRKLFIRGLSCDTSTEGLRSLFS 91
           +++ F+ DQL+ +L++A  RH DV + +R +AD D+  RK+F+ GL  DT  + L   F 
Sbjct: 90  LLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFK 149

Query: 92  SYGELEEAVVIIDKATGKSKGYGFVTFKHVDGALLALKEPSKTIDGRVTVTQLAAVG--- 151
            YGE+E+   ++DK +G+SKGYGF+ FK   GA  ALK+P K I  R+T  QLA++G   
Sbjct: 150 QYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTRMTACQLASIGPVQ 209

Query: 152 -----ISGQNSNAADLSLRKIYVANVPMDMPADKLLAHFSLYGEIEEGPLGFDKQTGKCR 211
                   Q+ N  ++  RKIYV+NV  D+   KLL  FS +GEIEEGPLG DK TG+ +
Sbjct: 210 GNPVVAPAQHFNPENVQ-RKIYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPK 269

Query: 212 GYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDGKK 243
           G+ALFVY+  E A+ AL +P KT +G  L C  ANDG K
Sbjct: 270 GFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPK 307

[Close]

BLAST of CsaV3_4G008320 vs. Swiss-Prot
Match: sp|Q9LES2|UBA2A_ARATH (UBP1-associated protein 2A OS=Arabidopsis thaliana OX=3702 GN=UBA2A PE=1 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-45
Identity = 112/277 (40.43%), Postives = 155/277 (55.96%), Query Frame = 0


Query: 32  IIDRFTPDQLIDILQDAVSRHLDVLDAVRSIADRDVSQRKLFIRGLSCDTSTEGLRSLFS 91
           +++ F+ +Q++ +L++A  +H+DV + +R +AD D   RK+F+ GL  DT TE L   F 
Sbjct: 102 LLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFK 161

Query: 92  SYGELEEAVVIIDKATGKSKGYGFVTFKHVDGALLALKEPSKTIDGRVTVTQL------- 151
            YGE+E+   + DK +GKSKGYGF+ +K   GA  ALK+P K I  R+T  QL       
Sbjct: 162 QYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGPVF 221

Query: 152 -------AAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLAHFSLYGEIEEGPLGFDK 211
                  AAV    Q+SN ++ + +KIYV+NV  ++   KLL  FS +GEIEEGPLG DK
Sbjct: 222 GGAPIAAAAVSAPAQHSN-SEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDK 281

Query: 212 QTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDGKKGKPG----------- 271
            TG+ +G+ LFVYK  E A+ AL +P KT +G  L C+ A DG   KPG           
Sbjct: 282 YTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAIDGP--KPGKQQQHHHNPHA 341

Query: 272 -GGPDGNQTQGAGQGNVHGDGMPMA-PPSAMPGSGGQ 282
              P   +    G G   G G  MA  P+ M G   Q
Sbjct: 342 YNNPRYQRNDNNGYGPPGGHGHLMAGNPAGMGGPTAQ 375

[Close]

BLAST of CsaV3_4G008320 vs. Swiss-Prot
Match: sp|Q9SHZ6|UBA1A_ARATH (UBP1-associated proteins 1A OS=Arabidopsis thaliana OX=3702 GN=UBA1A PE=1 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 5.5e-24
Identity = 58/123 (47.15%), Postives = 80/123 (65.04%), Query Frame = 0


Query: 26  PEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVRSIADRDVSQRKLFIRGLSCDTSTEG 85
           PE+ R+++  ++ DQL+D++  A      +  AV   ADRDV+ RK+F+ GL  +T+ E 
Sbjct: 60  PEELRELLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRET 119

Query: 86  LRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKHVDGALLALKEPSKTIDGRVTVTQLA 145
           L  +F  YGE+EE  V+IDKATGK+KG+GFV FK   GA  ALKEP K I  R    QLA
Sbjct: 120 LVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLA 179

Query: 146 AVG 149
           ++G
Sbjct: 180 SMG 182

[Close]

BLAST of CsaV3_4G008320 vs. Swiss-Prot
Match: sp|O64571|UBA1C_ARATH (UBP1-associated proteins 1C OS=Arabidopsis thaliana OX=3702 GN=UBA1C PE=3 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 1.1e-21
Identity = 51/134 (38.06%), Postives = 85/134 (63.43%), Query Frame = 0


Query: 27  EDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVRSIADRDVSQRKLFIRGLSCDTSTEGL 86
           ED ++++  ++ ++L++++     +   ++ A+   ADRD++QR +F+RG   DT+ E L
Sbjct: 365 EDIKQLLVAYSKEELVNLIYKTAEKGSRLISAILESADRDIAQRNIFVRGFGWDTTQENL 424

Query: 87  RSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKHVDGALLALKEPSKTIDGRVTVTQLAA 146
           ++ F SYGE+EE  V++DK TG+ KGYGFV FK   GA  ALK P K +  R+ V  LA+
Sbjct: 425 KTAFESYGEIEECSVVMDKDTGRGKGYGFVMFKTRKGAREALKRPEKRMYNRIVVCNLAS 484

Query: 147 --VGISGQNSNAAD 159
              G +G+  + A+
Sbjct: 485 EKPGKAGKEQDMAE 498

[Close]

BLAST of CsaV3_4G008320 vs. TrEMBL
Match: tr|A0A0A0KYY6|A0A0A0KYY6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083660 PE=4 SV=1)

HSP 1 Score: 699.9 bits (1805), Expect = 3.6e-198
Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 0


Query: 1   MDVTKKRRMDENGVDSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVR 60
           MDVTKKRRMDENGVDSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVR
Sbjct: 1   MDVTKKRRMDENGVDSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVR 60

Query: 61  SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKH 120
           SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKH
Sbjct: 61  SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKH 120

Query: 121 VDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLA 180
           VDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLA
Sbjct: 121 VDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLA 180

Query: 181 HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG 240
           HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG
Sbjct: 181 HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG 240

Query: 241 KKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGGQXXXXXXXXXXXXXSSGLQG 300
           KKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGGQXXXXXXXXXXXXXSSGLQG
Sbjct: 241 KKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGGQXXXXXXXXXXXXXSSGLQG 300

Query: 301 AQPLAHHPLNSSMGPGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           AQPLAHHPLNSSMGPGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 AQPLAHHPLNSSMGPGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQPAGTSPAPR 420
           XXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQPAGTSPAPR
Sbjct: 361 XXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQPAGTSPAPR 420

Query: 421 VPPGGMYPNVPPYY 435
           VPPGGMYPNVPPYY
Sbjct: 421 VPPGGMYPNVPPYY 434

[Close]

BLAST of CsaV3_4G008320 vs. TrEMBL
Match: tr|A0A1S3BT99|A0A1S3BT99_CUCME (UBP1-associated protein 2C OS=Cucumis melo OX=3656 GN=LOC103492928 PE=4 SV=1)

HSP 1 Score: 694.9 bits (1792), Expect = 1.2e-196
Identity = 418/434 (96.31%), Postives = 420/434 (96.77%), Query Frame = 0


Query: 1   MDVTKKRRMDENGVDSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVR 60
           MDVTKKRRMDENGVDSSE+SFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVL+AVR
Sbjct: 1   MDVTKKRRMDENGVDSSENSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLEAVR 60

Query: 61  SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKH 120
           SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKH
Sbjct: 61  SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKH 120

Query: 121 VDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLA 180
           VDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLA
Sbjct: 121 VDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLA 180

Query: 181 HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG 240
           HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG
Sbjct: 181 HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDG 240

Query: 241 KKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGGQXXXXXXXXXXXXXSSGLQG 300
           KKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSG Q             SSGLQG
Sbjct: 241 KKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGAQYGGPGGMGSYAGFSSGLQG 300

Query: 301 AQPLAHHPLNSSMGPGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           AQPLAHHPLNSSMGPGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 AQPLAHHPLNSSMGPGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQPAGTSPAPR 420
           XXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQPAGTSPAPR
Sbjct: 361 XXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQPAGTSPAPR 420

Query: 421 VPPGGMYPNVPPYY 435
           VPPGGMYPNVPPYY
Sbjct: 421 VPPGGMYPNVPPYY 434

[Close]

BLAST of CsaV3_4G008320 vs. TrEMBL
Match: tr|A0A2P5FKT1|A0A2P5FKT1_9ROSA (Splicing factor-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_056490 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 1.8e-133
Identity = 330/465 (70.97%), Postives = 366/465 (78.71%), Query Frame = 0


Query: 1   MDVTKKRRMDENGV------DSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLD 60
           MD +KKR+M+ENGV      D+ +SS ++++P+DARK+ID FTPDQL+DILQ+AV+RH D
Sbjct: 1   MDPSKKRKMEENGVVSAGGGDALDSSLTKLSPQDARKLIDPFTPDQLLDILQEAVARHAD 60

Query: 61  VLDAVRSIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYG 120
           VLDAVRSIADRDVSQRKLFIRGL  DT+TEGLR+LFS+YGELEEAVVI+DKATGKSKGYG
Sbjct: 61  VLDAVRSIADRDVSQRKLFIRGLGWDTTTEGLRALFSAYGELEEAVVILDKATGKSKGYG 120

Query: 121 FVTFKHVDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSN----AADLSLRKIYVANVP 180
           FVTF+HVDGALLALKEPSK IDGR+TVTQLAA G SG N+     AAD+SLRKIYVANVP
Sbjct: 121 FVTFRHVDGALLALKEPSKKIDGRMTVTQLAAAGNSGSNATSNAAAADVSLRKIYVANVP 180

Query: 181 MDMPADKLLAHFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGR 240
            DM +DKLLAHF+LYGEIEEGPLGFDKQTGKCRGYALFVYK PEGAQAALVDP+KTI+GR
Sbjct: 181 YDMASDKLLAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKTPEGAQAALVDPVKTIEGR 240

Query: 241 QLSCKFANDGKKGKPGG-GPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGGQXXXXXXXX 300
           QL+CK A DGKKGK GG GPDG Q    G GN HGDGM MAPP    G  G         
Sbjct: 241 QLNCKLAIDGKKGKQGGAGPDGVQAPVGGPGNAHGDGMGMAPPGGQFGGPG--------- 300

Query: 301 XXXXXSSGLQGAQPLAHHPLNSSM-GPGLS-------------------SXXXXXXXXXX 360
                 +G  G   + HHPLNSSM GPGLS                    XXXXXXXXXX
Sbjct: 301 -GIGSYTGFSGPPSMGHHPLNSSMGGPGLSXVNXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLYRLPQSSVGMPSG 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LYR+P +S G PSG
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYRIPPNSGGGPSG 420

Query: 421 GYPDSGHYSMSSASGHPNQHHQPAGTSPAPRVPPGGMYPNVPPYY 435
           GYP+SGHY +SS+S +P  HHQ +GTSP PRVP GGMYP  PPYY
Sbjct: 421 GYPESGHYGLSSSSSYPGPHHQQSGTSPLPRVPHGGMYP--PPYY 453

[Close]

BLAST of CsaV3_4G008320 vs. TrEMBL
Match: tr|A0A2P5BA73|A0A2P5BA73_PARAD (Splicing factor-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_256870 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 1.9e-130
Identity = 327/463 (70.63%), Postives = 361/463 (77.97%), Query Frame = 0


Query: 1   MDVTKKRRMDENGV------DSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLD 60
           MD +KKR+M+ENGV      D+ +SS  +++P+DARK+ID FTPDQL+DILQ+AV+RH D
Sbjct: 1   MDPSKKRKMEENGVVSAAGGDALDSSLKKLSPQDARKLIDPFTPDQLLDILQEAVARHAD 60

Query: 61  VLDAVRSIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYG 120
           VLDAVRSIADRDVSQRKLFIRGL  DT+TEGLR+LFS+YGELEEAVVI+DKATGKSKGYG
Sbjct: 61  VLDAVRSIADRDVSQRKLFIRGLGWDTTTEGLRALFSAYGELEEAVVILDKATGKSKGYG 120

Query: 121 FVTFKHVDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSN----AADLSLRKIYVANVP 180
           FVTF+HVDGALLALKEPSK IDGR+TVTQLAA G SG N+     AAD+SLRKIYVANVP
Sbjct: 121 FVTFRHVDGALLALKEPSKKIDGRMTVTQLAAAGNSGSNATSNAAAADVSLRKIYVANVP 180

Query: 181 MDMPADKLLAHFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGR 240
            DM +DKLLAHF+LYGEIEEGPLGFDKQTGKCRGYALFVYK PEGAQAALVDP+KTI+GR
Sbjct: 181 YDMASDKLLAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKTPEGAQAALVDPVKTIEGR 240

Query: 241 QLSCKFANDGKKGKPGG-GPDGNQTQGAGQGNVHGDGMPMAPPSAMPGSGGQXXXXXXXX 300
           QL+CK A DGKKGK GG GPDG Q           DGM MAPP    G  G         
Sbjct: 241 QLNCKLAIDGKKGKQGGAGPDGVQAPAXXXXXXXXDGMGMAPPGGQFGGPG--------- 300

Query: 301 XXXXXSSGLQGAQPLAHHPLNSSM-GPGLSS-----------------XXXXXXXXXXXX 360
                 +G  G   + HHPLNSSM GPGLS                  XXXXXXXXXXXX
Sbjct: 301 -GIGSYTGFSGPPSMGHHPLNSSMGGPGLSGVNSQAASSLGGXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLYRLPQSSVGMPSGGY 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SLYR+P SS G PSGGY
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLYRIPPSSGGGPSGGY 420

Query: 421 PDSGHYSMSSASGHPNQHHQPAGTSPAPRVPPGGMYPNVPPYY 435
           P+SGHY +SS+S +P  HHQ +GTSP PRVP GGMYP  PPYY
Sbjct: 421 PESGHYGLSSSSSYPGPHHQQSGTSPLPRVPHGGMYP--PPYY 451

[Close]

BLAST of CsaV3_4G008320 vs. TrEMBL
Match: tr|A5ADJ5|A5ADJ5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_19s0014g01570 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 9.1e-125
Identity = 318/453 (70.20%), Postives = 356/453 (78.59%), Query Frame = 0


Query: 1   MDVTKKRRMDENGVDSSE-SSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAV 60
           MD TKKR+MDENG+ S++  S +++ PEDARKII+ F  DQL++ILQ+A  RHLDVLDA+
Sbjct: 1   MDATKKRKMDENGLVSTDGDSLTKLAPEDARKIIEPFGHDQLLEILQNAAVRHLDVLDAI 60

Query: 61  RSIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFK 120
           RSIADRD++QRKLFIRGL  DT+TEGLR LFS+YGELEEAVVI+DK T KSKGYGFVTFK
Sbjct: 61  RSIADRDLTQRKLFIRGLGWDTTTEGLRQLFSAYGELEEAVVILDKVTAKSKGYGFVTFK 120

Query: 121 HVDGALLALKEPSKTIDGRVTVTQLAAVGISG--QNSNAADLSLRKIYVANVPMDMPADK 180
           HVDGALLALKEPSK IDGR+TVTQLAA G+SG   N++A D+S+RKIYVANVP+DMPAD+
Sbjct: 121 HVDGALLALKEPSKKIDGRMTVTQLAASGLSGPASNASAVDVSMRKIYVANVPVDMPADR 180

Query: 181 LLAHFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFA 240
           LLAHFS YGEIEEGPLGFDKQTGK RG+ALFVYK  E AQAALVDP K IDGRQL CK A
Sbjct: 181 LLAHFSSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEAAQAALVDPTKMIDGRQLVCKLA 240

Query: 241 NDGKKGKPGGGPDGNQTQGAGQGNVHGDGMPMAPPSAMPGS-GGQXXXXXXXXXXXXXSS 300
            +GKKGK  GGP    T   G+   HGDG+ + P  +MPGS G Q              S
Sbjct: 241 IEGKKGKT-GGPAQAPTGVPGEAG-HGDGLGVPPQGSMPGSLGSQYPGGPGGISAYGGFS 300

Query: 301 GLQGAQPLA-HHPLNSSM--------------GPGLSSXXXXXXXXXXXXXXXXXXXXXX 360
           G  G  PL  HHPLNSS+                    XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 G--GPPPLGHHHPLNSSLPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLYRLPQSSVGMPSGGYPDSGHYSMSS 420
           XXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX SLYRLP S+VGMPSGGYPDSGHYS+SS
Sbjct: 361 XXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXSLYRLPPSTVGMPSGGYPDSGHYSLSS 420

Query: 421 ASGHPNQHHQPAGTSPAPRVPPGGMYPNVPPYY 435
           +S +P+Q HQPAGTSP PRVPPGGMYP+ PPYY
Sbjct: 421 SSAYPSQIHQPAGTSPVPRVPPGGMYPSGPPYY 449

The following BLAST results are available for this feature:

BLAST of CsaV3_4G008320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137219.1	5.5e-198	100.00	PREDICTED: UBP1-associated protein 2C [Cucumis sativus] >XP_011653305.1 PREDICTE...	[more]
XP_008451717.1	1.8e-196	96.31	PREDICTED: UBP1-associated protein 2C [Cucumis melo] >XP_008451718.1 PREDICTED: ...	[more]
XP_022980930.1	3.2e-182	94.02	UBP1-associated protein 2C-like [Cucurbita maxima] >XP_022980938.1 UBP1-associat...	[more]
XP_023538334.1	1.0e-180	93.10	UBP1-associated protein 2C-like [Cucurbita pepo subsp. pepo] >XP_023538342.1 UBP...	[more]
XP_023553445.1	2.4e-177	91.26	UBP1-associated protein 2C-like [Cucurbita pepo subsp. pepo] >XP_023553446.1 UBP...	[more]

BLAST of CsaV3_4G008320 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15010.1	1.0e-105	65.45	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G41060.1	7.2e-51	46.12	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G56860.3	6.3e-47	40.43	UBP1-associated protein 2A	[more]
AT2G22090.2	3.0e-25	47.15	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G19380.1	6.3e-23	38.06	RNA recognition motif (RRM)-containing protein	[more]

BLAST of CsaV3_4G008320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LKA4\|UBA2C_ARATH	1.8e-104	65.45	UBP1-associated protein 2C OS=Arabidopsis thaliana OX=3702 GN=UBA2C PE=2 SV=1	[more]
sp\|O80678\|UBA2B_ARATH	1.3e-49	46.12	UBP1-associated protein 2B OS=Arabidopsis thaliana OX=3702 GN=UBA2B PE=2 SV=1	[more]
sp\|Q9LES2\|UBA2A_ARATH	1.1e-45	40.43	UBP1-associated protein 2A OS=Arabidopsis thaliana OX=3702 GN=UBA2A PE=1 SV=1	[more]
sp\|Q9SHZ6\|UBA1A_ARATH	5.5e-24	47.15	UBP1-associated proteins 1A OS=Arabidopsis thaliana OX=3702 GN=UBA1A PE=1 SV=2	[more]
sp\|O64571\|UBA1C_ARATH	1.1e-21	38.06	UBP1-associated proteins 1C OS=Arabidopsis thaliana OX=3702 GN=UBA1C PE=3 SV=2	[more]

BLAST of CsaV3_4G008320 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KYY6\|A0A0A0KYY6_CUCSA	3.6e-198	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083660 PE=4 SV=1	[more]
tr\|A0A1S3BT99\|A0A1S3BT99_CUCME	1.2e-196	96.31	UBP1-associated protein 2C OS=Cucumis melo OX=3656 GN=LOC103492928 PE=4 SV=1	[more]
tr\|A0A2P5FKT1\|A0A2P5FKT1_9ROSA	1.8e-133	70.97	Splicing factor-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_056490 P...	[more]
tr\|A0A2P5BA73\|A0A2P5BA73_PARAD	1.9e-130	70.63	Splicing factor-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_2568...	[more]
tr\|A5ADJ5\|A5ADJ5_VITVI	9.1e-125	70.20	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_19s0014g01570 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008219	cell death
biological_process	GO:0006952	defense response
biological_process	GO:0009693	ethylene biosynthetic process
biological_process	GO:0010150	leaf senescence
biological_process	GO:0009987	cellular process
biological_process	GO:0044699	single-organism process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0030529	intracellular ribonucleoprotein complex
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0044424	intracellular part
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003729	mRNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G008320.1	CsaV3_4G008320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 163..235 e-value: 3.3E-11 score: 53.3 coord: 71..143 e-value: 3.1E-18 score: 76.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 72..139 e-value: 4.7E-15 score: 55.1 coord: 164..232 e-value: 1.5E-8 score: 34.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 70..138 score: 15.238
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 162..239 score: 13.174
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 4..148 e-value: 1.7E-20 score: 75.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 150..265 e-value: 2.7E-16 score: 61.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 384..434
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 416..434
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 394..414
None	No IPR available	PANTHER	PTHR44678	FAMILY NOT NAMED	coord: 1..434
None	No IPR available	PANTHER	PTHR44678:SF2	UBP1-ASSOCIATED PROTEIN 2C	coord: 1..434
None	No IPR available	CDD	cd12384	RRM_RBM24_RBM38_like	coord: 70..145 e-value: 1.56858E-34 score: 123.109
None	No IPR available	CDD	cd12384	RRM_RBM24_RBM38_like	coord: 162..237 e-value: 5.93044E-31 score: 112.709
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 149..266
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 63..145

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G008320	CSPI04G08100	Wild cucumber (PI 183967)	cpicucB213
CsaV3_4G008320	Cucsa.273510	Cucumber (Gy14) v1	cgycucB418
CsaV3_4G008320	CmaCh04G005670	Cucurbita maxima (Rimu)	cmacucB0849
CsaV3_4G008320	CmaCh16G004220	Cucurbita maxima (Rimu)	cmacucB0393
CsaV3_4G008320	CmaCh01G012420	Cucurbita maxima (Rimu)	cmacucB0572
CsaV3_4G008320	CmoCh16G004540	Cucurbita moschata (Rifu)	cmocucB0388
CsaV3_4G008320	CmoCh04G006070	Cucurbita moschata (Rifu)	cmocucB0834
CsaV3_4G008320	CmoCh01G012950	Cucurbita moschata (Rifu)	cmocucB0559
CsaV3_4G008320	Cp4.1LG14g03700	Cucurbita pepo (Zucchini)	cpecucB0266
CsaV3_4G008320	Cp4.1LG02g01980	Cucurbita pepo (Zucchini)	cpecucB0707
CsaV3_4G008320	Cp4.1LG01g01520	Cucurbita pepo (Zucchini)	cpecucB0506
CsaV3_4G008320	CsGy4G007960	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G008320	Carg13169	Silver-seed gourd	carcucB0050
CsaV3_4G008320	Carg14725	Silver-seed gourd	carcucB0345
CsaV3_4G008320	Carg11353	Silver-seed gourd	carcucB0689
CsaV3_4G008320	Cla002434	Watermelon (97103) v1	cucwmB326
CsaV3_4G008320	MELO3C016101	Melon (DHL92) v3.5.1	cucmeB317
CsaV3_4G008320	ClCG07G010010	Watermelon (Charleston Gray)	cucwcgB343
CsaV3_4G008320	Lsi04G020240	Bottle gourd (USVL1VR-Ls)	cuclsiB310
CsaV3_4G008320	Lsi07G002960	Bottle gourd (USVL1VR-Ls)	cuclsiB324
CsaV3_4G008320	MELO3C016101.2	Melon (DHL92) v3.6.1	cucmedB309
CsaV3_4G008320	Cla97C07G136700	Watermelon (97103) v2	cucwmbB329
CsaV3_4G008320	Bhi01G002548	Wax gourd	cucwgoB385
CsaV3_4G008320	Bhi09G002859	Wax gourd	cucwgoB430

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G008320	Cucumber (Chinese Long) v3	cuccucB164
CsaV3_4G008320	Cucumber (Gy14) v2	cgybcucB173
CsaV3_4G008320	Wild cucumber (PI 183967)	cpicucB220
CsaV3_4G008320	Melon (DHL92) v3.5.1	cucmeB313
CsaV3_4G008320	Melon (DHL92) v3.6.1	cucmedB305
CsaV3_4G008320	Watermelon (97103) v2	cucwmbB284
CsaV3_4G008320	Wax gourd	cucwgoB370