CsaV3_4G005150 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G005150
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Description40S ribosomal protein SA
Locationchr4 : 3385340 .. 3387119 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACTGGTACAGAACAGTGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAAAACTGCGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGTATTTTGTGAATACATTTCAGATTTATAGATCTTTGCTTTTTTTAAAATCTGTTAAGTGCTTCATAGACACTGATTATTAGGAGGCCTTTCCACTTATTTTCTCTTTGTTTTCAATGTTTTATAGATATTTAGCTTGAACTGGAATCTTAAGTCATTTAATGGGCGTGCTTTATCTATATTTCAAATCAGAGTTTGATCATAATTTCATTAATTCCCATGAATGGATATTTGTTCTCATGATGTAGGAATCTACATTATTAACTTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATTGAGAATCCTCAAGATATTATTGTTCAATCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCATACCCCTGGAACATTCACCAACCAGCTTCAAACCTCATTCAATGAGCCACGCCTTCTGATATTGACTGATCCTCGAACTGATCATCAGGTGCTTTAACATCTTTAAGAATTAATTCTAGTTTGGGATTATAAGTTTGCGTTGAAGAGGATGGTTTTCTCTTACCAAATTTAGATTTACTCGTGTTTATTCCCTTAAGCATAAGCCATAGTTTATGCTTTACTTTAGTTGTTGGTGCTGCTATTTATGTTGCCTGGTTGGTTTATTTGCTTGTTGCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAATTGCCTTTTGCGACACTGATTCGCCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCGAGGATGGTTTTGCAGATGCGTGGAACGGTTCGTCCTGGGTACAAATGGGACGTGATGGTAACTTCTTTACCTATCTGAACTTGAGAAATTGCATTATGACATGATATTTGAAATTGACACTTGATTGTTGGATGTTAAATCAAAGGCTTGGAAAGAATGGTAATGGTATGCACGTGTTTGTTGCACAGGTCGATTTGTTTTTCTACCGAGAGCCTGAGGAGGTGAAGGAGAAAGAGGAAGAAGAAGCTGTTGCACCACCAGATTACGGCATTGCAGATTTTGGTTCTGCTCCAGTGGCTGTAGATCAATGGGTTCCTGATGCTCAGTGGGGTGCTCCTAATGTGGCTCCTACTGCTGCGGCTGCTTCAGTTTCTAATGCTGAGTGGGCACAAGAGTCAGGTTGAATCCGAGCCTTTTCTTTCTTGCTTATTTTAATAATTTAATCCTTTGCCATTGCCATTGCCATTGCTGTGTTTTACACTCCCAACTATTTTTTTAGGCTGTCATTTTTTCCTATAAATAATAGTGAAAGTTCCCAAGTCCCAAGGCTTTAGGCCTTGGGCTTTTAGAGCTTAACAAAAGGCGAGTGCTGATAAATGCGCCTCTCCTTTGAGGCGAGGTGCTAGCGTTGAGCCTTTTAAACACTGGTTTTAGGACGAGTGCATAAAAGGGTTTTATCGTGGATATTTATTTATTGTTCTTTTTACTTTTGCAGTCAGAGCAGCAGACGGATGGGGTGTTGCCATACCACCACCGGCACCTTCACTTGAAGCTGCTGCACCTCCTGCCTCCGATTGGTAA

mRNA sequence

ATGGCGACTGGTACAGAACAGTGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAAAACTGCGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACTTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATTGAGAATCCTCAAGATATTATTGTTCAATCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCATACCCCTGGAACATTCACCAACCAGCTTCAAACCTCATTCAATGAGCCACGCCTTCTGATATTGACTGATCCTCGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAATTGCCTTTTGCGACACTGATTCGCCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCGAGGATGGTTTTGCAGATGCGTGGAACGGTTCGTCCTGGGTACAAATGGGACGTGATGGTCGATTTGTTTTTCTACCGAGAGCCTGAGGAGGTGAAGGAGAAAGAGGAAGAAGAAGCTGTTGCACCACCAGATTACGGCATTGCAGATTTTGGTTCTGCTCCAGTGGCTGTAGATCAATGGGTTCCTGATGCTCAGTGGGGTGCTCCTAATGTGGCTCCTACTGCTGCGGCTGCTTCAGTTTCTAATGCTGAGTGGGCACAAGAGTCAGTCAGAGCAGCAGACGGATGGGGTGTTGCCATACCACCACCGGCACCTTCACTTGAAGCTGCTGCACCTCCTGCCTCCGATTGGTAA

Coding sequence (CDS)

ATGGCGACTGGTACAGAACAGTGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAAAACTGCGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACTTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATTGAGAATCCTCAAGATATTATTGTTCAATCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCATACCCCTGGAACATTCACCAACCAGCTTCAAACCTCATTCAATGAGCCACGCCTTCTGATATTGACTGATCCTCGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAATTGCCTTTTGCGACACTGATTCGCCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCGAGGATGGTTTTGCAGATGCGTGGAACGGTTCGTCCTGGGTACAAATGGGACGTGATGGTCGATTTGTTTTTCTACCGAGAGCCTGAGGAGGTGAAGGAGAAAGAGGAAGAAGAAGCTGTTGCACCACCAGATTACGGCATTGCAGATTTTGGTTCTGCTCCAGTGGCTGTAGATCAATGGGTTCCTGATGCTCAGTGGGGTGCTCCTAATGTGGCTCCTACTGCTGCGGCTGCTTCAGTTTCTAATGCTGAGTGGGCACAAGAGTCAGTCAGAGCAGCAGACGGATGGGGTGTTGCCATACCACCACCGGCACCTTCACTTGAAGCTGCTGCACCTCCTGCCTCCGATTGGTAA

Protein sequence

MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW
Homology
[Close]
BLAST of CsaV3_4G005150 vs. NCBI nr
Match: XP_011653139.1 (PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus] >KGN53260.1 hypothetical protein Csa_4G038770 [Cucumis sativus])

HSP 1 Score: 609.4 bits (1570), Expect = 6.7e-171
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0 

Query: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 240
           ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 240

Query: 241 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 299
           WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW
Sbjct: 241 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 298

[Close]
BLAST of CsaV3_4G005150 vs. NCBI nr
Match: XP_008453731.1 (PREDICTED: 40S ribosomal protein SA-like [Cucumis melo])

HSP 1 Score: 585.5 bits (1508), Expect = 1.0e-163
Identity = 287/298 (96.31%), Postives = 290/298 (97.32%), Query Frame = 0 

Query: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATG EQ QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 240
           ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP+AVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240

Query: 241 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 299
           WVPDAQW A NVAPTAAAASVSN EWAQE V AADGWGVAIPPPAPSLEA APP+SDW
Sbjct: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW 298

[Close]
BLAST of CsaV3_4G005150 vs. NCBI nr
Match: XP_022942879.1 (40S ribosomal protein SA-like [Cucurbita moschata])

HSP 1 Score: 535.8 bits (1379), Expect = 9.4e-149
Identity = 267/301 (88.70%), Postives = 278/301 (92.36%), Query Frame = 0 

Query: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTEQ QL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 240
           ARMVLQMRGTVRPG+KWDVMVDLFFYREPEE KEKEEE+AVAPPDYGIADFG+AP+  D+
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 241 WVPDAQWGAPNVAPTAAAAS--VSNAEWAQESVR---AADGWGVAIPPPAPSLEAAAPPA 297
           WV DAQW AP++ P AAAA+  VSN EWA E V    AADGW VA  PPAP LEA APPA
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA 300

[Close]
BLAST of CsaV3_4G005150 vs. NCBI nr
Match: XP_022982113.1 (40S ribosomal protein SA-like [Cucurbita maxima])

HSP 1 Score: 530.0 bits (1364), Expect = 5.1e-147
Identity = 264/301 (87.71%), Postives = 275/301 (91.36%), Query Frame = 0 

Query: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTEQ QL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 240
           ARMVLQMRGTVRPG+KWDVMVDLFFYREPEE KEKEEE+AVAPPDYGIADFG+AP+  D+
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 241 WVPDAQWGAPNVAPTAAAAS--VSNAEWAQESVR---AADGWGVAIPPPAPSLEAAAPPA 297
           WV DAQW AP++ P AAAA+  VSN EWA E V    AADGW  A  PPAP  E  APPA
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA 300

[Close]
BLAST of CsaV3_4G005150 vs. NCBI nr
Match: XP_022152685.1 (40S ribosomal protein SA-like [Momordica charantia])

HSP 1 Score: 528.9 bits (1361), Expect = 1.1e-146
Identity = 265/304 (87.17%), Postives = 276/304 (90.79%), Query Frame = 0 

Query: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT T   QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP-VAVD 240
           ARMVLQMRGT+R G+KWDVMVDLFFYREPEE KE+EEEEAVA PDYGIADFG+AP VA D
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVA-PDYGIADFGAAPLVASD 240

Query: 241 QW---VPDAQWGAPNVAPTAAAASVSNAEWAQESVR--AADGWGVAIPPPAPSLEAAAPP 299
           QW   + DAQWGAP+V P AAA  VSN EW+QE V   AADGW  A+PPPAP++E  APP
Sbjct: 241 QWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGGAPP 300

[Close]
BLAST of CsaV3_4G005150 vs. TAIR10
Match: AT1G72370.1 (40s ribosomal protein SA)

HSP 1 Score: 401.4 bits (1030), Expect = 5.0e-112
Identity = 206/274 (75.18%), Postives = 219/274 (79.93%), Query Frame = 0 

Query: 1   MAT--GTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT       QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVK-EKEEEEAVAPPDYGIADFGSAPVA 240
           LLARMVLQMRGT+  G KWDVMVDLFFYREPEE K E E                     
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEXXXXXXXXXXXXXXXXXXXXG 240

Query: 241 VDQW----VPDAQWGAPNVAPTAAAASVSNAEWA 268
            DQW    +PDA W     AP +AA +   A W+
Sbjct: 241 GDQWTTAQIPDAAWPGEGQAPISAAPAA--ASWS 272

[Close]
BLAST of CsaV3_4G005150 vs. TAIR10
Match: AT3G04770.1 (40s ribosomal protein SA B)

HSP 1 Score: 364.4 bits (934), Expect = 6.8e-101
Identity = 172/194 (88.66%), Postives = 187/194 (96.39%), Query Frame = 0 

Query: 9   QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIV 68
           Q+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIV
Sbjct: 12  QVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVIV 71

Query: 69  AIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTD 128
           AIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGRHTPGTFTNQ+QTSF+EPRLLILTD
Sbjct: 72  AIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLLILTD 131

Query: 129 PRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR 188
           PRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMR
Sbjct: 132 PRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQMR 191

Query: 189 GTVRPGYKWDVMVD 203
           GT+    KWDVMV+
Sbjct: 192 GTILAAQKWDVMVN 205

[Close]
BLAST of CsaV3_4G005150 vs. Swiss-Prot
Match: sp|O80377|RSSA_DAUCA (40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 1.0e-122
Identity = 226/298 (75.84%), Postives = 245/298 (82.21%), Query Frame = 0 

Query: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MA+G    +LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MASGAR--ELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
            +AARVIV+IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+E
Sbjct: 61  MLAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPV-AVD 240
           ARMVLQMRG +  G+KW+VMVDLFFYREPEE K++EEE+ +   DY +AD+ +AP+   D
Sbjct: 181 ARMVLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEED-LPVGDY-VADYAAAPIGGAD 240

Query: 241 QW--VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPA 296
           QW  +PDAQWG   V P  A ++V    W      A DGW  A  PP P       PA
Sbjct: 241 QWNAIPDAQWGGDVVQP--ANSAVPAGTWTDAGPIAGDGWDAAAAPPVPGAVGLDVPA 292

[Close]
BLAST of CsaV3_4G005150 vs. Swiss-Prot
Match: sp|O65751|RSSA_CICAR (40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 2.3e-122
Identity = 229/304 (75.33%), Postives = 248/304 (81.58%), Query Frame = 0 

Query: 1   MATGTEQC-QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MAT T    QL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+K
Sbjct: 1   MATTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDK 60

Query: 61  LQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120
           L +AAR+IVAIEN QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+
Sbjct: 61  LNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVD 240
           LARMVLQMRGT+RPG KWDVMVDLFFYREPEE K+ EE+E VA PDY IADF  + +  D
Sbjct: 181 LARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDE-VAAPDYAIADFNVSAIPSD 240

Query: 241 -QW--VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPP--APSLEAAAPP 299
            QW    D  W      P  A  +V+   WA     A D WG A+PPP   P+    + P
Sbjct: 241 GQWPAAIDQPWNDAVPQPIPAVPAVN---WAAPEAVAGD-WGEAVPPPQQIPTAGIESVP 299

[Close]
BLAST of CsaV3_4G005150 vs. Swiss-Prot
Match: sp|O22518|RSSA_SOYBN (40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.1e-120
Identity = 220/274 (80.29%), Postives = 229/274 (83.58%), Query Frame = 0 

Query: 1   MATGTEQC-----QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGK 60
           MAT T        QLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGK
Sbjct: 1   MATATNAAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGK 60

Query: 61  TWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ 120
           TWEKLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ
Sbjct: 61  TWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ 120

Query: 121 TSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGC 180
           TSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGC
Sbjct: 121 TSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGC 180

Query: 181 LFWLLARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP 240
           LFWLLARMVLQMRGT+RPG KWDVMVDLFFYREPEE K++   EA A  DY I DF +  
Sbjct: 181 LFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQXXXEAPA-VDYAITDFNAGA 240

Query: 241 VAVD-QW------------------VPDAQWGAP 251
           +A D QW                  VP   WGAP
Sbjct: 241 IAADGQWPGTIDQSWSDAVPQPIPAVPGVNWGAP 273

[Close]
BLAST of CsaV3_4G005150 vs. Swiss-Prot
Match: sp|A5BUU4|RSSA_VITVI (40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 3.6e-120
Identity = 231/314 (73.57%), Postives = 246/314 (78.34%), Query Frame = 0 

Query: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT T    LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATPTR--ALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+E
Sbjct: 61  QLAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP---VA 240
           ARMVLQMR T+ PG+KWDVMVDLFFYREPEE KE+E +E VA PDYGI D+ +     + 
Sbjct: 181 ARMVLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLG 240

Query: 241 VDQW---VPDA-QWGA--PNVAPTAAAASVSNAEWAQESVR------AADGWGV------ 286
              W   + DA QWGA  P VAP  A   V  + W   +        A DGW        
Sbjct: 241 GGDWGAPITDAPQWGADVPAVAPIPA---VPGSNWGDAAPMPSAVPIATDGWDAXXXXXX 300

[Close]
BLAST of CsaV3_4G005150 vs. Swiss-Prot
Match: sp|Q9ZSR8|RSSA_BRANA (40S ribosomal protein SA OS=Brassica napus OX=3708 GN=LRP PE=2 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 7.9e-115
Identity = 204/261 (78.16%), Postives = 224/261 (85.82%), Query Frame = 0 

Query: 9   QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIV 68
           QLSQKEADI+MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKL MAARVIV
Sbjct: 8   QLSQKEADIKMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLMMAARVIV 67

Query: 69  AIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTD 128
           AIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF+EPRLLILTD
Sbjct: 68  AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTD 127

Query: 129 PRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR 188
           PRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMR
Sbjct: 128 PRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMR 187

Query: 189 GTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGI--ADFGSAPVAVDQW----V 248
           GT+RP  KWDVMVDLFFYREPEE K ++E+E     ++G+   ++G      DQW    +
Sbjct: 188 GTIRPAQKWDVMVDLFFYREPEETKPEDEDEVAPQAEFGLPAPEYGGG----DQWTTAAI 247

Query: 249 PDAQWGAPNVAPTAAAASVSN 264
           PDA W     AP +AA +  +
Sbjct: 248 PDAAWPGEAQAPISAAPAAGS 264

[Close]
BLAST of CsaV3_4G005150 vs. TrEMBL
Match: tr|A0A0A0KUD9|A0A0A0KUD9_CUCSA (40S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_4G038770 PE=3 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 4.4e-171
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0 

Query: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 240
           ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 240

Query: 241 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 299
           WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW
Sbjct: 241 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 298

[Close]
BLAST of CsaV3_4G005150 vs. TrEMBL
Match: tr|A0A1S3BXR8|A0A1S3BXR8_CUCME (40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103494374 PE=3 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 6.8e-164
Identity = 287/298 (96.31%), Postives = 290/298 (97.32%), Query Frame = 0 

Query: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATG EQ QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 240
           ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP+AVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240

Query: 241 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 299
           WVPDAQW A NVAPTAAAASVSN EWAQE V AADGWGVAIPPPAPSLEA APP+SDW
Sbjct: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW 298

[Close]
BLAST of CsaV3_4G005150 vs. TrEMBL
Match: tr|A0A1S3CDH5|A0A1S3CDH5_CUCME (40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103499190 PE=3 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 1.7e-138
Identity = 254/305 (83.28%), Postives = 266/305 (87.21%), Query Frame = 0 

Query: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT T   QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP-VAVD 240
           ARMVLQMRGT+R G++WDVMVDLFFYREPEE KE     AVAPPDYGIAD+G AP VA D
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEXXXXXAVAPPDYGIADYGGAPLVASD 240

Query: 241 QW---VPDAQWGAPNVAPTAAAA----SVSNAEWAQESVR-AADGWGVAIPPPAPSLEAA 297
           QW   + DAQWGAP++ P   AA     VSN EW QE V  A+DGW  A+PPPAP+ E  
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAVVVPPVSNVEWTQEPVALASDGWDAAVPPPAPAAEGG 300

[Close]
BLAST of CsaV3_4G005150 vs. TrEMBL
Match: tr|A0A0A0L946|A0A0A0L946_CUCSA (40S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_3G646520 PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 3.8e-138
Identity = 255/307 (83.06%), Postives = 265/307 (86.32%), Query Frame = 0 

Query: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT T   QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP-VAVD 240
           ARMVLQMRGT+R G++WDVMVDLFFYREPEE KE     AVAPPDYGIAD+G AP VA D
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEXXXXXAVAPPDYGIADYGGAPLVASD 240

Query: 241 QW---VPDAQWGAPNVAPTAAAA-----SVSNAEWAQESV--RAADGWGVAIPPPAPSLE 297
           QW   + DAQWGAP++ P   AA      VSN EW QE V   A+DGW  A PPPAPS E
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDAAAPPPAPSAE 300

[Close]
BLAST of CsaV3_4G005150 vs. TrEMBL
Match: tr|A0A0A0K8X1|A0A0A0K8X1_CUCSA (40S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_6G016990 PE=3 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 5.3e-132
Identity = 245/307 (79.80%), Postives = 259/307 (84.36%), Query Frame = 0 

Query: 1   MATG-TEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATG     QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVD 240
           LARMVLQMRGT+R G+KWDVMVDLFFYREPEE KE EEEEA+ P D+GIAD+ +AP+  D
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD 240

Query: 241 QW---VPDAQWGAPNVAPT-AAAASVSNAEWAQESVR-AADGWGV---AIPPPAPSLEAA 299
           QW   +PDAQWGA +  P+ A     S AEWA E V  AADGW            S E  
Sbjct: 241 QWTSQIPDAQWGAADAIPSPAPVVPASGAEWAPEPVALAADGWDAXXXXXXXXXXSAEGT 300

The following BLAST results are available for this feature:
BLAST of CsaV3_4G005150 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011653139.16.7e-171100.00PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus] >KGN53260.1 hypotheti... [more]
XP_008453731.11.0e-16396.31PREDICTED: 40S ribosomal protein SA-like [Cucumis melo][more]
XP_022942879.19.4e-14988.7040S ribosomal protein SA-like [Cucurbita moschata][more]
XP_022982113.15.1e-14787.7140S ribosomal protein SA-like [Cucurbita maxima][more]
XP_022152685.11.1e-14687.1740S ribosomal protein SA-like [Momordica charantia][more]
BLAST of CsaV3_4G005150 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G72370.15.0e-11275.1840s ribosomal protein SA[more]
AT3G04770.16.8e-10188.6640s ribosomal protein SA B[more]
BLAST of CsaV3_4G005150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O80377|RSSA_DAUCA1.0e-12275.8440S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1[more]
sp|O65751|RSSA_CICAR2.3e-12275.3340S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1[more]
sp|O22518|RSSA_SOYBN2.1e-12080.2940S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1[more]
sp|A5BUU4|RSSA_VITVI3.6e-12073.5740S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV... [more]
sp|Q9ZSR8|RSSA_BRANA7.9e-11578.1640S ribosomal protein SA OS=Brassica napus OX=3708 GN=LRP PE=2 SV=1[more]
BLAST of CsaV3_4G005150 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KUD9|A0A0A0KUD9_CUCSA4.4e-171100.0040S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_4G038770 PE=3 SV=1[more]
tr|A0A1S3BXR8|A0A1S3BXR8_CUCME6.8e-16496.3140S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103494374 PE=3 SV=1[more]
tr|A0A1S3CDH5|A0A1S3CDH5_CUCME1.7e-13883.2840S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103499190 PE=3 SV=1[more]
tr|A0A0A0L946|A0A0A0L946_CUCSA3.8e-13883.0640S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_3G646520 PE=3 SV=1[more]
tr|A0A0A0K8X1|A0A0A0K8X1_CUCSA5.3e-13279.8040S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_6G016990 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR023591Ribosomal_S2_flav_dom_sf
IPR027498Ribosomal_S2_euk
IPR018130Ribosomal_S2_CS
IPR005707Ribosomal_S2_euk/arc
IPR001865Ribosomal_S2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0000028 ribosomal small subunit assembly
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003824 catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G005150.1CsaV3_4G005150.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001865Ribosomal protein S2PRINTSPR00395RIBOSOMALS2coord: 47..56
score: 64.92
coord: 96..113
score: 47.01
coord: 121..138
score: 44.62
coord: 159..173
score: 53.64
coord: 17..35
score: 36.11
coord: 138..149
score: 51.15
IPR001865Ribosomal protein S2PFAMPF00318Ribosomal_S2coord: 20..114
e-value: 1.6E-13
score: 50.3
coord: 119..184
e-value: 9.0E-13
score: 47.9
IPR001865Ribosomal protein S2CDDcd01425RPS2coord: 20..186
e-value: 4.82788E-72
score: 222.072
IPR005707Ribosomal protein S2, eukaryotic/archaealTIGRFAMTIGR01012TIGR01012coord: 12..208
e-value: 2.8E-96
score: 318.7
IPR005707Ribosomal protein S2, eukaryotic/archaealPANTHERPTHR1148940S RIBOSOMAL PROTEIN SAcoord: 6..288
NoneNo IPR availableGENE3DG3DSA:3.40.50.10490coord: 16..222
e-value: 6.4E-100
score: 334.6
NoneNo IPR availablePANTHERPTHR11489:SF1540S RIBOSOMAL PROTEIN SA-1-RELATEDcoord: 6..288
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00962RIBOSOMAL_S2_1coord: 17..28
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00963RIBOSOMAL_S2_2coord: 121..145
IPR027498Ribosomal protein S2, eukaryoticHAMAPMF_03015Ribosomal_S2_eukcoord: 2..269
score: 50.701
IPR023591Ribosomal protein S2, flavodoxin-like domain superfamilySUPERFAMILYSSF52313Ribosomal protein S2coord: 12..202